An emerging clade of Chikungunya West African genotype discovered in real-time during 2023 outbreak in Senegal.

Padane, Abdou; Tegally, Houriiyah; Ramphal, Yajna; Seyni, Ndiaye; Sarr, Mariéma; Diop, Mame Matar; Diedhiou, Cyrille Kouligueul; Mboup, Aminata; Diouf, Ndèye Dieyna; Souaré, Abdoulaye; Diagne, Ndéye Diabou; Aza-Gnandji, Marilyne; Dabo, Ndèye Astou; Dia, Yacine Amet; Diaw, Ndeye Aminata; Leye, Nafissatou; Diaw, Papa Alassane; Ahouidi, Ambroise; Cissé, Badara; Diallo, Abdoulaye Samba; Diop, Ousmane; Diallo, Abdou Aziz; Ndoye, Souadou; Sanko, Tomasz J; Baxter, Cheryl; Wilkinson, Eduan; San, James E; Tshabuila, Derek; Naidoo, Yeshnee; Pillay, Sureshnee; Lessells, Richard; Cissé, Khady; Leye, Abdoulaye; Mbaye, Khalifa Ababacar; Kania, Dramane; Tinto, Bachirou; Traoré, Isidore; Kagone, Sampawendé Thérèse; Ouedraogo, Abdoul Salam; Gifford, Robert J; Lourenço, José; Giovanetti, Marta; Giandhari, Jennifer; de Oliveira, Tulio; Mboup, Souleymane

Padane, Abdou; Tegally, Houriiyah; Ramphal, Yajna; Seyni, Ndiaye; Sarr, Mariéma; Diop, Mame Matar; Diedhiou, Cyrille Kouligueul; Mboup, Aminata; Diouf, Ndèye Dieyna; Souaré, Abdoulaye; Diagne, Ndéye Diabou; Aza-Gnandji, Marilyne; Dabo, Ndèye Astou; Dia, Yacine Amet; Diaw, Ndeye Aminata; Leye, Nafissatou; Diaw, Papa Alassane; Ahouidi, Ambroise; Cissé, Badara; Diallo, Abdoulaye Samba; Diop, Ousmane; Diallo, Abdou Aziz; Ndoye, Souadou; Sanko, Tomasz J; Baxter, Cheryl; Wilkinson, Eduan; San, James E; Tshabuila, Derek; Naidoo, Yeshnee; Pillay, Sureshnee; Lessells, Richard; Cissé, Khady; Leye, Abdoulaye; Mbaye, Khalifa Ababacar; Kania, Dramane; Tinto, Bachirou; Traoré, Isidore; Kagone, Sampawendé Thérèse; Ouedraogo, Abdoul Salam; Gifford, Robert J; Lourenço, José; Giovanetti, Marta; Giandhari, Jennifer; de Oliveira, Tulio; Mboup, Souleymane.

Afiliação

Padane A; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Tegally H; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Ramphal Y; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Seyni N; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Sarr M; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diop MM; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diedhiou CK; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Mboup A; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diouf ND; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Souaré A; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diagne ND; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Aza-Gnandji M; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Dabo NA; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Dia YA; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diaw NA; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Leye N; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diaw PA; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Ahouidi A; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Cissé B; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diallo AS; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diop O; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Diallo AA; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Ndoye S; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Sanko TJ; Institut de Recherche en Santé, de Surveillance Épidémiologique et de Formation (IRESSEF), Dakar, Senegal.
Baxter C; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Wilkinson E; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
San JE; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Tshabuila D; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Naidoo Y; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Pillay S; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Lessells R; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban 4001, South Africa.
Cissé K; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban 4001, South Africa.
Leye A; District of Kédougou, Kédougou, Senegal.
Mbaye KA; District of Kédougou, Kédougou, Senegal.
Kania D; District of Kédougou, Kédougou, Senegal.
Tinto B; Centre MURAZ,Bobo-Dioulasso, Burkina Faso.
Traoré I; Centre MURAZ,Bobo-Dioulasso, Burkina Faso.
Kagone ST; Centre MURAZ,Bobo-Dioulasso, Burkina Faso.
Ouedraogo AS; Centre MURAZ,Bobo-Dioulasso, Burkina Faso.
Gifford RJ; Centre MURAZ,Bobo-Dioulasso, Burkina Faso.
Lourenço J; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.
Giovanetti M; Universidade Católica Portuguesa, Faculty of Medicine, Biomedical Research Centre, Lisbon, Portugal.
Giandhari J; Instituto Rene Rachou, Fundação Oswaldo Cruz, Minas Gerais, Brazil.
de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban 4001, South Africa.
Mboup S; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch 7600, South Africa.