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The ISMRM Open Science Initiative for Perfusion Imaging (OSIPI): Results from the OSIPI-Dynamic Contrast-Enhanced challenge.
Shalom, Eve S; Kim, Harrison; van der Heijden, Rianne A; Ahmed, Zaki; Patel, Reyna; Hormuth, David A; DiCarlo, Julie C; Yankeelov, Thomas E; Sisco, Nicholas J; Dortch, Richard D; Stokes, Ashley M; Inglese, Marianna; Grech-Sollars, Matthew; Toschi, Nicola; Sahoo, Prativa; Singh, Anup; Verma, Sanjay K; Rathore, Divya K; Kazerouni, Anum S; Partridge, Savannah C; LoCastro, Eve; Paudyal, Ramesh; Wolansky, Ivan A; Shukla-Dave, Amita; Schouten, Pepijn; Gurney-Champion, Oliver J; Jirík, Radovan; Macícek, Ondrej; Bartos, Michal; Vitous, Jirí; Das, Ayesha Bharadwaj; Kim, S Gene; Bokacheva, Louisa; Mikheev, Artem; Rusinek, Henry; Berks, Michael; Hubbard Cristinacce, Penny L; Little, Ross A; Cheung, Susan; O'Connor, James P B; Parker, Geoff J M; Moloney, Brendan; LaViolette, Peter S; Bobholz, Samuel; Duenweg, Savannah; Virostko, John; Laue, Hendrik O; Sung, Kyunghyun; Nabavizadeh, Ali; Saligheh Rad, Hamidreza.
Afiliação
  • Shalom ES; School of Physics and Astronomy, University of Leeds, Leeds, UK.
  • Kim H; Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Sheffield, UK.
  • van der Heijden RA; Department of Radiology, University of Alabama, Birmingham, Alabama, USA.
  • Ahmed Z; Department of Radiology & Nuclear Medicine, Erasmus MC University Medical Center, Rotterdam, The Netherlands.
  • Patel R; Department of Radiology, University of Wisconsin-Madison, Madison, Wisconsin, USA.
  • Hormuth DA; Corewell Health William Beaumont University Hospital, Royal Oak, Michigan, USA.
  • DiCarlo JC; Department of Radiology, Neuroradiology Division, Mayo Clinic, Scottsdale, Arizona, USA.
  • Yankeelov TE; Oden Institute for Computational Engineering and Sciences, The University of Texas, Austin, Texas, USA.
  • Sisco NJ; Biomedical Imaging Center, Livestrong Cancer Institutes, University of Texas at Austin, Austin, Texas, USA.
  • Dortch RD; Departments of Biomedical Engineering, Diagnostic Medicine, Oncology, Livestrong Cancer Institutes, Oden Institute for Computational Engineering and Sciences, The University of Texas, Austin, Texas, USA.
  • Stokes AM; Department of Imaging Physics, MD Anderson Cancer Center, Houston, Texas, USA.
  • Inglese M; Department of Translational Neuroscience, Barrow Neurological Institute, Phoenix, Arizona, USA.
  • Grech-Sollars M; Department of Translational Neuroscience, Barrow Neurological Institute, Phoenix, Arizona, USA.
  • Toschi N; Department of Translational Neuroscience, Barrow Neurological Institute, Phoenix, Arizona, USA.
  • Sahoo P; Department of Biomedicine and Prevention, University of Rome, Tor Vergata, Italy.
  • Singh A; Department of Surgery and Cancer, Imperial College, London, UK.
  • Verma SK; Department of Surgery and Cancer, Imperial College, London, UK.
  • Rathore DK; Department of Computer Science, University College London, London, UK.
  • Kazerouni AS; Lysholm Department of Neuroradiology, National Hospital for Neurology and Neurosurgery, University College London Hospitals NHS Foundation Trust, London, UK.
  • Partridge SC; Department of Biomedicine and Prevention, University of Rome, Tor Vergata, Italy.
  • LoCastro E; Athinoula A. Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, Massachusetts, USA.
  • Paudyal R; University Medical Center Göttingen, Göttingen, Germany.
  • Wolansky IA; Center for Biomedical Engineering, Indian Institute of Technology Delhi, New Delhi, India.
  • Shukla-Dave A; Institute of Bioengineering and Bioimaging, Singapore, Singapore.
  • Schouten P; Institute of Psychiatry, Psychology & Neuroscience, King's College, London, UK.
  • Gurney-Champion OJ; Department of Radiology, University of Washington, Seattle, Washington, USA.
  • Jirík R; Department of Radiology, University of Washington, Seattle, Washington, USA.
  • Macícek O; Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
  • Bartos M; Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
  • Vitous J; Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
  • Das AB; Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
  • Kim SG; Department of Radiology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
  • Bokacheva L; Department of Radiology and Nuclear Medicine, University of Amsterdam, Amsterdam, The Netherlands.
  • Mikheev A; Department of Radiology and Nuclear Medicine, University of Amsterdam, Amsterdam, The Netherlands.
  • Rusinek H; Cancer Center Amsterdam, Imaging and Biomarkers, Amsterdam, The Netherlands.
  • Berks M; Czech Academy of Sciences, Institute of Scientific Instruments, Brno, Czech Republic.
  • Hubbard Cristinacce PL; Czech Academy of Sciences, Institute of Scientific Instruments, Brno, Czech Republic.
  • Little RA; Czech Academy of Sciences, Institute of Information Theory and Automation, Praha, Czech Republic.
  • Cheung S; Czech Academy of Sciences, Institute of Scientific Instruments, Brno, Czech Republic.
  • O'Connor JPB; Department of Radiology, Weill Cornell Medical College, New York, New York, USA.
  • Parker GJM; Department of Radiology, Weill Cornell Medical College, New York, New York, USA.
  • Moloney B; Department of Radiology, Grossman School of Medicine, New York University, New York, New York, USA.
  • LaViolette PS; Department of Radiology, Grossman School of Medicine, New York University, New York, New York, USA.
  • Bobholz S; Department of Radiology, Grossman School of Medicine, New York University, New York, New York, USA.
  • Duenweg S; Division of Cancer Sciences, University of Manchester, Manchester, UK.
  • Virostko J; Division of Cancer Sciences, University of Manchester, Manchester, UK.
  • Laue HO; Division of Cancer Sciences, University of Manchester, Manchester, UK.
  • Sung K; Division of Cancer Sciences, University of Manchester, Manchester, UK.
  • Nabavizadeh A; Division of Cancer Sciences, University of Manchester, Manchester, UK.
  • Saligheh Rad H; Department of Radiology, The Christie Hospital NHS Trust, Manchester, UK.
Magn Reson Med ; 91(5): 1803-1821, 2024 May.
Article em En | MEDLINE | ID: mdl-38115695
ABSTRACT

PURPOSE:

K trans $$ {K}^{\mathrm{trans}} $$ has often been proposed as a quantitative imaging biomarker for diagnosis, prognosis, and treatment response assessment for various tumors. None of the many software tools for K trans $$ {K}^{\mathrm{trans}} $$ quantification are standardized. The ISMRM Open Science Initiative for Perfusion Imaging-Dynamic Contrast-Enhanced (OSIPI-DCE) challenge was designed to benchmark methods to better help the efforts to standardize K trans $$ {K}^{\mathrm{trans}} $$ measurement.

METHODS:

A framework was created to evaluate K trans $$ {K}^{\mathrm{trans}} $$ values produced by DCE-MRI analysis pipelines to enable benchmarking. The perfusion MRI community was invited to apply their pipelines for K trans $$ {K}^{\mathrm{trans}} $$ quantification in glioblastoma from clinical and synthetic patients. Submissions were required to include the entrants' K trans $$ {K}^{\mathrm{trans}} $$ values, the applied software, and a standard operating procedure. These were evaluated using the proposed OSIP I gold $$ \mathrm{OSIP}{\mathrm{I}}_{\mathrm{gold}} $$ score defined with accuracy, repeatability, and reproducibility components.

RESULTS:

Across the 10 received submissions, the OSIP I gold $$ \mathrm{OSIP}{\mathrm{I}}_{\mathrm{gold}} $$ score ranged from 28% to 78% with a 59% median. The accuracy, repeatability, and reproducibility scores ranged from 0.54 to 0.92, 0.64 to 0.86, and 0.65 to 1.00, respectively (0-1 = lowest-highest). Manual arterial input function selection markedly affected the reproducibility and showed greater variability in K trans $$ {K}^{\mathrm{trans}} $$ analysis than automated methods. Furthermore, provision of a detailed standard operating procedure was critical for higher reproducibility.

CONCLUSIONS:

This study reports results from the OSIPI-DCE challenge and highlights the high inter-software variability within K trans $$ {K}^{\mathrm{trans}} $$ estimation, providing a framework for ongoing benchmarking against the scores presented. Through this challenge, the participating teams were ranked based on the performance of their software tools in the particular setting of this challenge. In a real-world clinical setting, many of these tools may perform differently with different benchmarking methodology.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Imageamento por Ressonância Magnética / Meios de Contraste Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Imageamento por Ressonância Magnética / Meios de Contraste Idioma: En Ano de publicação: 2024 Tipo de documento: Article