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A MassQL-Integrated Molecular Networking Approach for the Discovery and Substructure Annotation of Bioactive Cyclic Peptides.
Berger, Tim; Alenfelder, Judith; Steinmüller, Sophie; Heimann, Dominik; Gohain, Namrata; Petras, Daniel; Wang, Mingxun; Berger, Robert; Kostenis, Evi; Reher, Raphael.
Afiliação
  • Berger T; Institute for Pharmaceutical Biology and Biotechnology, Department of Pharmacy, Philipps-University Marburg, Robert-Koch-Straße 4, 35037 Marburg, Germany.
  • Alenfelder J; Section of Molecular, Cellular and Pharmacobiology, Institute of Pharmaceutical Biology, Nussallee 6, 53115 Bonn, Germany.
  • Steinmüller S; Section of Molecular, Cellular and Pharmacobiology, Institute of Pharmaceutical Biology, Nussallee 6, 53115 Bonn, Germany.
  • Heimann D; Department of Chemical Biology, Helmholtz Centre for Infection Research (HZI), Inhoffenstraße 7, 38124 Braunschweig, Germany.
  • Gohain N; Department of Chemistry, Philipps-University Marburg, Hans-Meerwein-Straße 4, 35032 Marburg, Germany.
  • Petras D; Interfaculty of Microbiology and Infection Medicine, University of Tübingen, 72076 Tübingen, Germany.
  • Wang M; Department of Computer Science, University of California Riverside, Riverside, California 92507, United States.
  • Berger R; Department of Chemistry, Philipps-University Marburg, Hans-Meerwein-Straße 4, 35032 Marburg, Germany.
  • Kostenis E; Section of Molecular, Cellular and Pharmacobiology, Institute of Pharmaceutical Biology, Nussallee 6, 53115 Bonn, Germany.
  • Reher R; Institute for Pharmaceutical Biology and Biotechnology, Department of Pharmacy, Philipps-University Marburg, Robert-Koch-Straße 4, 35037 Marburg, Germany.
J Nat Prod ; 87(4): 692-704, 2024 Apr 26.
Article em En | MEDLINE | ID: mdl-38385767
ABSTRACT
The marine sponge-derived fungus Stachylidium bicolor 293 K04 is a prolific producer of specialized metabolites, including certain cyclic tetrapeptides called endolides, which are characterized by the presence of the unusual amino acid N-methyl-3-(3-furyl)-alanine. This rare feature can be used as bait to detect new endolide-like analogs through customized fragment pattern searches of tandem mass spectrometry data using the Mass Spec Query Language (MassQL). Here, we integrate endolide-specific MassQL queries with molecular networking to obtain substructural information guiding the targeted isolation and structure elucidation of the new proline-containing endolides E (1) and F (2). We showed that endolide F (but not E) is a moderate antagonist of the arginine vasopressin V1A receptor, a member of the G protein-coupled receptor superfamily.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Peptídeos Cíclicos / Poríferos Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Peptídeos Cíclicos / Poríferos Idioma: En Ano de publicação: 2024 Tipo de documento: Article