The chromosome-level genome assembly of the giant dobsonfly Acanthacorydalis orientalis (McLachlan, 1899).
Sci Data
; 11(1): 351, 2024 Apr 08.
Article
em En
| MEDLINE
| ID: mdl-38589366
ABSTRACT
Acanthacorydalis orientalis (McLachlan, 1899) (Megaloptera Corydalidae) is an important freshwater-benthic invertebrate species that serves as an indicator for water-quality biomonitoring and is valuable for conservation from East Asia. Here, a high-quality reference genome for A. orientalis was constructed using Oxford Nanopore sequencing and High throughput Chromosome Conformation Capture (Hi-C) technology. The final genome size is 547.98 Mb, with the N50 values of contig and scaffold being 7.77 Mb and 50.53 Mb, respectively. The longest contig and scaffold are 20.57 Mb and 62.26 Mb in length, respectively. There are 99.75% contigs anchored onto 13 pseudo-chromosomes. Benchmarking Universal Single-Copy Orthologs (BUSCO) analysis showed that the completeness of the genome assembly is 99.01%. There are 10,977 protein-coding genes identified, of which 84.00% are functionally annotated. The genome contains 44.86% repeat sequences. This high-quality genome provides substantial data for future studies on population genetics, aquatic adaptation, and evolution of Megaloptera and other related insect groups.
Texto completo:
1
Base de dados:
MEDLINE
Assunto principal:
Sequências Repetitivas de Ácido Nucleico
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Genoma de Inseto
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Neópteros
Idioma:
En
Ano de publicação:
2024
Tipo de documento:
Article