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Compendium of Metabolomic and Genomic Datasets for Cyanobacteria: Mined the Gap.
Ferrinho, Scarlet; Connaris, Helen; Mouncey, Nigel J; Goss, Rebecca J M.
Afiliação
  • Ferrinho S; School of Chemistry, University of St Andrews, North Haugh, St Andrews, Fife, UK.
  • Connaris H; School of Chemistry, University of St Andrews, North Haugh, St Andrews, Fife, UK.
  • Mouncey NJ; DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
  • Goss RJM; School of Chemistry, University of St Andrews, North Haugh, St Andrews, Fife, UK. Electronic address: rjmg@st-andrews.ac.uk.
Water Res ; 256: 121492, 2024 Jun 01.
Article em En | MEDLINE | ID: mdl-38593604
ABSTRACT
Cyanobacterial blooms, producing toxic secondary metabolites, are becoming increasingly common phenomena in the face of rising global temperatures. They are the world's most abundant photosynthetic organisms, largely owing their success to a range of highly diverse and complex natural products possessing a broad spectrum of different bioactivities. Over 2600 compounds have been isolated from cyanobacteria thus far, and their characterisation has revealed unusual and useful chemistries and motifs including alkynes, halogens, and non-canonical amino acids. Genome sequencing of cyanobacteria lags behind natural product isolation, with only 19% of cyanobacterial natural products associated with a sequenced organism. Recent advances in meta(genomics) provide promise to narrow this gap and has also facilitated the uprise of combined genomic and metabolomic approaches, heralding a new era of discovery of novel compounds. Analyses of the datasets described within this manuscript reveal the asynchrony of current genomic and metabolomic data, highlight the chemical diversity of cyanobacterial natural products. Linked to this manuscript, we make these manually curated datasets freely accessible for the public to facilitate further research in this important area.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Cianobactérias / Genômica / Metabolômica Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Cianobactérias / Genômica / Metabolômica Idioma: En Ano de publicação: 2024 Tipo de documento: Article