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Coding-complete genomes of 18 SARS-CoV-2 Omicron JN.1, JN.1.4, and JN.1.11 sub-lineages in Bangladesh.
Tahsin, Anika; Hasan, Mahin; Rahman, Saikt; Jubair, Mohammad; Afrad, Mokibul Hassan; Khan, Manjur Hossain; Alam, Md Shaheen; Begum, Mst Noorjahan; Karim, Md Yeasir; Mukta, Sharmin Aktar; Habib, Mohammad Tanbir; Alam, Ahmed Nawsher; Chowdhury, Emran Kabir; Rahman, Md Rofiqur; Ryan, Edward T; Shirin, Tahmina; Rahman, Mustafizur; Qadri, Firdausi.
Afiliação
  • Tahsin A; Institute for Developing Science and Health initiatives, Dhaka, Bangladesh.
  • Hasan M; Institute for Developing Science and Health initiatives, Dhaka, Bangladesh.
  • Rahman S; Institute for Developing Science and Health initiatives, Dhaka, Bangladesh.
  • Jubair M; International Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh.
  • Afrad MH; International Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh.
  • Khan MH; Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.
  • Alam MS; International Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh.
  • Begum MN; International Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh.
  • Karim MY; International Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh.
  • Mukta SA; Institute for Developing Science and Health initiatives, Dhaka, Bangladesh.
  • Habib MT; Institute for Developing Science and Health initiatives, Dhaka, Bangladesh.
  • Alam AN; Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.
  • Chowdhury EK; Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka, Bangladesh.
  • Rahman MR; Institute for Developing Science and Health initiatives, Dhaka, Bangladesh.
  • Ryan ET; Division of Infectious Diseases, Massachusetts General Hospital, Boston, Massachusetts, USA.
  • Shirin T; Department of Medicine, Harvard Medical School, Boston, Massachusetts, USA.
  • Rahman M; Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
  • Qadri F; Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.
Microbiol Resour Announc ; 13(6): e0013524, 2024 Jun 11.
Article em En | MEDLINE | ID: mdl-38656213
ABSTRACT
We report 18 coding-complete genome sequences of emerging SARS-CoV-2 Omicron sub-lineages JN.1, JN.1.4, and JN.1.11 from Bangladesh. Nasopharyngeal swab samples were obtained from individuals with COVID-19 symptoms between December 2023 and January 2024. Whole genome sequencing was performed following the ARTIC Network-based protocol using Oxford Nanopore Technology.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article