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Overcoming limitations in current measures of drug response may enable AI-driven precision oncology.
Ovchinnikova, Katja; Born, Jannis; Chouvardas, Panagiotis; Rapsomaniki, Marianna; Kruithof-de Julio, Marianna.
Afiliação
  • Ovchinnikova K; Urology Research Laboratory, Department for BioMedical Research, University of Bern, Bern, Switzerland.
  • Born J; IBM Research Europe, Zurich, Switzerland.
  • Chouvardas P; Urology Research Laboratory, Department for BioMedical Research, University of Bern, Bern, Switzerland.
  • Rapsomaniki M; Department of Urology, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland.
  • Kruithof-de Julio M; IBM Research Europe, Zurich, Switzerland. marianna.rapsomaniki@unil.ch.
NPJ Precis Oncol ; 8(1): 95, 2024 Apr 24.
Article em En | MEDLINE | ID: mdl-38658785
ABSTRACT
Machine learning (ML) models of drug sensitivity prediction are becoming increasingly popular in precision oncology. Here, we identify a fundamental limitation in standard measures of drug sensitivity that hinders the development of personalized prediction models - they focus on absolute effects but do not capture relative differences between cancer subtypes. Our work suggests that using z-scored drug response measures mitigates these limitations and leads to meaningful predictions, opening the door for sophisticated ML precision oncology models.

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article