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A principled framework to assess the information-theoretic fitness of brain functional sub-circuits.
Duong-Tran, Duy; Nguyen, Nghi; Mu, Shizhuo; Chen, Jiong; Bao, Jingxuan; Xu, Frederick; Garai, Sumita; Cadena-Pico, Jose; Kaplan, Alan David; Chen, Tianlong; Zhao, Yize; Shen, Li; Goñi, Joaquín.
Afiliação
  • Duong-Tran D; Department of Biostatistics, Epidemiology, and Informatics (DBEI), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Nguyen N; Department of Mathematics, United States Naval Academy, Annapolis, MD, USA.
  • Mu S; Gonda Multidisciplinary Brain Research Center, Bar-Ilan University, Ramat Gan, Israel.
  • Chen J; Department of Biostatistics, Epidemiology, and Informatics (DBEI), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Bao J; Department of Biostatistics, Epidemiology, and Informatics (DBEI), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Xu F; Department of Biostatistics, Epidemiology, and Informatics (DBEI), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Garai S; Department of Biostatistics, Epidemiology, and Informatics (DBEI), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Cadena-Pico J; Department of Biostatistics, Epidemiology, and Informatics (DBEI), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Kaplan AD; Machine Learning Group, Lawrence Livermore National Laboratory, Livermore, CA, USA.
  • Chen T; Computational Engineering Division, Lawrence Livermore National Laboratory, Livermore, CA, USA.
  • Zhao Y; Department of Computer Science, The University of North Carolina at Chapel Hill.
  • Shen L; School of Public Health, Yale University, New Heaven, CT, USA.
  • Goñi J; Department of Biostatistics, Epidemiology, and Informatics (DBEI), Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
ArXiv ; 2024 Jul 23.
Article em En | MEDLINE | ID: mdl-38979488
ABSTRACT
In systems and network neuroscience, many common practices in brain connectomic analysis are often not properly scrutinized. One such practice is mapping a predetermined set of sub-circuits, like functional networks (FNs), onto subjects' functional connectomes (FCs) without adequately assessing the information-theoretic appropriateness of the partition. Another practice that goes unchallenged is thresholding weighted FCs to remove spurious connections without justifying the chosen threshold. This paper leverages recent theoretical advances in Stochastic Block Models (SBMs) to formally define and quantify the information-theoretic fitness (e.g., prominence) of a predetermined set of FNs when mapped to individual FCs under different fMRI task conditions. Our framework allows for evaluating any combination of FC granularity, FN partition, and thresholding strategy, thereby optimizing these choices to preserve important topological features of the human brain connectomes. By applying to the Human Connectome Project with Schaefer parcellations at multiple levels of granularity, the framework showed that the common thresholding value of 0.25 was indeed information-theoretically valid for group-average FCs despite its previous lack of justification. Our results pave the way for the proper use of FNs and thresholding methods and provide insights for future research in individualized parcellations.

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article