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Iron-sulphur protein catalysed [4+2] cycloadditions in natural product biosynthesis.
Zheng, Yu; Sakai, Katsuyuki; Watanabe, Kohei; Takagi, Hiroshi; Sato-Shiozaki, Yumi; Misumi, Yuko; Miyanoiri, Yohei; Kurisu, Genji; Nogawa, Toshihiko; Takita, Ryo; Takahashi, Shunji.
Afiliação
  • Zheng Y; Natural Product Biosynthesis Research Unit, RIKEN Center for Sustainable Resource Science, Saitama, 351-0198, Japan.
  • Sakai K; Natural Product Biosynthesis Research Unit, RIKEN Center for Sustainable Resource Science, Saitama, 351-0198, Japan.
  • Watanabe K; Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, 113-0033, Japan.
  • Takagi H; Natural Product Biosynthesis Research Unit, RIKEN Center for Sustainable Resource Science, Saitama, 351-0198, Japan.
  • Sato-Shiozaki Y; Natural Product Biosynthesis Research Unit, RIKEN Center for Sustainable Resource Science, Saitama, 351-0198, Japan.
  • Misumi Y; Institute for Protein Research, Osaka University, Osaka, 565-0871, Japan.
  • Miyanoiri Y; Institute for Protein Research, Osaka University, Osaka, 565-0871, Japan.
  • Kurisu G; Institute for Protein Research, Osaka University, Osaka, 565-0871, Japan.
  • Nogawa T; Molecular Structure Characterization Unit, RIKEN Center for Sustainable Resource Science, Saitama, 351-0198, Japan.
  • Takita R; Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, 113-0033, Japan.
  • Takahashi S; Graduate School of Pharmaceutical Sciences, University of Shizuoka, Shizuoka, 422-8526, Japan.
Nat Commun ; 15(1): 5779, 2024 Jul 10.
Article em En | MEDLINE | ID: mdl-38987535
ABSTRACT
To the best of our knowledge, enzymes that catalyse intramolecular Diels-Alder ([4+2] cycloaddition) reactions are frequently reported in natural product biosynthesis; however, no native enzymes utilising Lewis acid catalysis have been reported. Verticilactam is a representative member of polycyclic macrolactams, presumably produced by spontaneous cycloaddition. We report that the intramolecular [4+2] cycloadditions can be significantly accelerated by ferredoxins (Fds), a class of small iron-sulphur (Fe-S) proteins. Through iron atom substitution by Lewis acidic gallium (Ga) iron and computational calculations, we confirm that the ubiquitous Fe-S cluster efficiently functions as Lewis acid to accelerate the tandem [4+2] cycloaddition and Michael addition reactions by lowering free energy barriers. Our work highlights Nature's ingenious strategy to generate complex molecule structures using the ubiquitous Fe-S protein. Furthermore, our study sheds light on the future design of Fd as a versatile Lewis acid catalyst for [4+2] cycloaddition reactions.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Produtos Biológicos / Ácidos de Lewis / Reação de Cicloadição / Proteínas Ferro-Enxofre Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Produtos Biológicos / Ácidos de Lewis / Reação de Cicloadição / Proteínas Ferro-Enxofre Idioma: En Ano de publicação: 2024 Tipo de documento: Article