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1.
PLoS One ; 14(3): e0212888, 2019.
Article in English | MEDLINE | ID: mdl-30889178

ABSTRACT

TRIM5α is an interferon inducible restriction factor which contributes to intrinsic defense against HIV infection by targeting the HIV capsid protein CA. Although human TRIM5α (huTRIM5α) does not potently inhibit HIV-1 infection, the ability of huTRIM5α to exhibit some control of HIV-1 infection is evidenced by a single nucleotide polymorphism in huTRIM5α which substitutes aspartic acid to glycine at position 249 (G249D) in the L2 region and is associated with higher susceptibility to HIV-1 infection. To understand the mechanistic basis for the reduced antiviral activity, we employed biophysical and cell biological methods coupled with molecular dynamics simulations to compare WT and the G249D polymorphism of huTRIM5α. We investigated the differences in conformational dynamics of rhesus and huTRIM5α Coiled Coil-Linker 2 (CC-L2) dimers utilizing circular dichroism and single molecule-Fluorescence Energy Transfer (sm-FRET). These methods revealed that the G249D dimer exhibits secondary structure and conformational dynamics similar to WT huTRIM5α. Homology modelling revealed that G249 was present on the hairpin of the antiparallel dimer, in a position which may act to stabilize the adjacent BBox2 domain which mediates the inter-dimeric contacts required for the formation of TRIM5 assemblies. We therefore asked if the G249D mutant forms assemblies in cells with the same efficiency as WT protein by expressing these proteins as YFP fusions and quantifying the number of assemblies in cells. In cells expressing comparable amounts of protein, the G249D mutant formed fewer assemblies than WT protein, in agreement with our homology modeling predictions and molecular dynamics simulations of dimers and higher oligomers of TRIM5α, providing a mechanistic explanation of the reduced antiviral activity of the G249D polymorphism.


Subject(s)
Carrier Proteins/genetics , HIV Infections/genetics , HIV-1/immunology , Animals , Antiviral Restriction Factors , Capsid Proteins/immunology , Capsid Proteins/metabolism , Carrier Proteins/immunology , Carrier Proteins/metabolism , Cats , Genetic Predisposition to Disease , HEK293 Cells , HIV Infections/immunology , HIV Infections/virology , HIV-1/metabolism , Human Immunodeficiency Virus Proteins/immunology , Human Immunodeficiency Virus Proteins/metabolism , Humans , Molecular Dynamics Simulation , Polymorphism, Single Nucleotide , Protein Conformation, alpha-Helical/genetics , Protein Domains/genetics , Protein Structure, Quaternary/genetics , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Recombinant Proteins/metabolism , Tripartite Motif Proteins , Ubiquitin-Protein Ligases
2.
J Am Mosq Control Assoc ; 34(2): 107-116, 2018 06.
Article in English | MEDLINE | ID: mdl-31442163

ABSTRACT

During June to September 2017, 7 mosquito control programs in the midwestern United States evaluated a total of 9 catch basin larvicide formulations using similar protocols. Treated basins were monitored among study sites to observe when larvicides failed to control mosquitoes in 25% or more basins within a site. Overall, when monitoring occurred within the maximum label duration of the larvicides, sites treated with a single larvicide tablet or briquet surpassed the 25% fail threshold more often than pellet and granular larvicide formulations. In 438 of the study basins, the depth from sump bottom to catch basin lid was measured. In basins that were deeper than 5 ft (1.5 m), larvicides failed to control mosquitoes significantly more often than those 5 ft or shallower.


Subject(s)
Culex , Insecticides , Mosquito Control/methods , Animals , Culex/growth & development , Illinois , Larva/growth & development , Michigan
3.
Virology ; 500: 161-168, 2017 01.
Article in English | MEDLINE | ID: mdl-27821283

ABSTRACT

The TRIM5α protein from rhesus macaques (rhTRIM5α) mediates a potent inhibition of HIV-1 infection via a mechanism that involves the abortive disassembly of the viral core. We have demonstrated that alpha-helical elements within the Linker 2 (L2) region, which lies between the SPRY domain and the Coiled-Coil domain, influence the potency of restriction. Here, we utilize single-molecule FRET analysis to reveal that the L2 region of the TRIM5α dimer undergoes dynamic conformational changes, which results in the displacement of L2 regions by 25 angstroms relative to each other. Analysis of restriction enhancing or abrogating mutations in the L2 region reveal that restriction defective mutants are unable to undergo dynamic conformational changes and do not assume compact, alpha-helical conformations in the L2 region. These data suggest a model in which conformational changes in the L2 region mediate displacement of CA bound SPRY domains to induce the destabilization of assembled capsid during restriction.


Subject(s)
Carrier Proteins/chemistry , Carrier Proteins/immunology , HIV Infections/immunology , HIV-1/physiology , Macaca mulatta/immunology , Amino Acid Sequence , Animals , Carrier Proteins/genetics , Cell Line , Dimerization , Disease Models, Animal , HIV Infections/genetics , HIV Infections/virology , HIV-1/genetics , Humans , Macaca mulatta/genetics , Macaca mulatta/virology , Mutation , Protein Conformation
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