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1.
Small ; 19(34): e2301564, 2023 Aug.
Article in English | MEDLINE | ID: mdl-37093190

ABSTRACT

Serious capacity and voltage degradation of Li-rich layered oxides (LLOs) caused by severe interfacial side reactions (ISR), structural instability, and transition metal (TM) dissolution during charge/discharge need to be urgently resolved. Here, it is proposed for the inaugural time that the confinement effect of PO4 3- dilutes the LiMn6 superstructure units on the surface of LLOs, while deriving a stable interface with phosphate compounds and spinel species. Combining theoretical calculations, diffraction, spectroscopy, and micrography, an in-depth investigation of the mechanism is performed. The results show that the modified LLO exhibits excellent anionic/cationic redox reversibility and ultra-high cycling stability. The capacity retention is increased from 72.4% to 95.4%, and the voltage decay is suppressed from 2.48 to 1.29 mV cycle-1 after 300 cycles at 1 C. It also has stable long cycling performance, with capacity retention improved from 40.2% to 81.9% after 500 cycles at 2 C. The excellent electrochemical performance is attributed to the diluted superstructure units on the surface of LLO inhibiting the TM migration in the intralayer and interlayer. Moreover, the stable interfacial layers alleviate the occurrence of ISR and TM dissolution. Therefore, this strategy can give some important insights into the development of highly stable LLOs.

2.
Langmuir ; 38(38): 11610-11620, 2022 Sep 27.
Article in English | MEDLINE | ID: mdl-36104265

ABSTRACT

Biomass as a carbon material source is the characteristic of green chemistry. Herein, a series of hierarchical P-doped cotton stalk carbon materials (HPCSCMs) were prepared from cheap and abundant biowaste cotton stalk. These materials possess a surface area of 3463.14 m2 g-1 and hierarchical pores. As lithium-ion battery (LIB) anodes, the samples exhibit 1100 mAh g-1 at 0.1 A g-1 after 100 cycles and hold 419 mAh g-1 at 1 A g-1 after 1000 cycles, with nearly 100% capacity retention. After HPCSCMs are loaded with sulfur (S/HPCSCMs), the samples (S/HPCSCMs-2) deliver a discharge capacity of 413 mAh g-1 at 0.1 A g-1 after 100 cycles as lithium-sulfur (Li-S) battery cathodes. This excellent electrochemical performance can be attributed to P in carbon networks, which not only provides more active sites, but also improves electrical conductivity.

3.
J Colloid Interface Sci ; 660: 114-123, 2024 Apr 15.
Article in English | MEDLINE | ID: mdl-38241860

ABSTRACT

Transition metal oxides (TMOs) are abundant and cost-effective materials. However, poor conductivity and low intrinsic activity limit their application in electrolyzed water catalysts. Herein, we prepared P-FeMoO4 in situ on nickel foam (P-FMO@NF) by phosphorylation-modified FeMoO4 to optimize its electrocatalytic properties. Interestingly, phosphorus doping is accompanied by the generation of oxygen vacancies and surface phosphates. Oxygen vacancies accelerated Mo dissolution during the oxygen evolution reaction (OER), leading to the rapid reconfiguration of P-FMO@NF to FeOOH and regulating the electronic structure of P-FMO@NF. The formation of phosphates is caused by the substitution of some molybdates with phosphates, which further increases the amount of oxygen vacancies. Hence, the OER overpotential of P-FMO@NF at a current density of 10 mA cm-2 is only 206 mV, and the hydrogen evolution reaction (HER) overpotential is 154 mV. It was assembled into a water splitting cell with a voltage of just 1.59 V at 10 mA cm-2 and shows excellent stability over 50 h. These excellent electrocatalytic properties are mainly attributed to the oxygen vacancies, which improve the interfacial charge transfer properties of the catalysts. This study provides new insights into phosphorus doping and offers a new perspective on the design of electrocatalysts.

4.
Open Med (Wars) ; 18(1): 20220533, 2023.
Article in English | MEDLINE | ID: mdl-36820066

ABSTRACT

lncRNA TPT1-AS1 plays an oncogenic role in ovarian and cervical cancers. However, its involvement in the pathological progress of esophageal squamous-cell carcinomas (ESCCs) is unclear. lncRNA TPT1-AS1 was mainly localized in the cytoplasm of ESCC cells and interacted with miR-26a. In ESCC tissues, lncRNA TPT1-AS1 level was obviously increased, while miR-26a level was decreased. Interestingly, lncRNA TPT1-AS1 level was not significantly correlated with miR-26a level but was positively correlated with HMGA1 mRNA, a target of miR-26a. In ESCC cell lines KYSE510 and KYSE-30, lncRNA TPT1-AS1 overexpression enhanced HMGA1 expression, while it had no effect on miR-26a expression. Cell migration and proliferation assays indicated that lncRNA TPT1-AS1 and HMGA1 overexpression promoted ESCC cell migration and invasion, while their effects were alleviated by miR-26a overexpression. The migration and invasion of ESCC cells were suppressed by lncRNA TPT1-AS1 knockdown. In conclusion, lncRNA TPT1-AS1 plays an oncogenic role in ESCC and might function by upregulating HMGA1 via sponging miR-26a.

5.
Microsyst Nanoeng ; 9: 110, 2023.
Article in English | MEDLINE | ID: mdl-37701521

ABSTRACT

This paper presents a surface acoustic wave (SAW) sensor based on coplanar integrated Langasite (LGS) that is fabricated using wet etching, high-temperature bonding, and ion beam etching (IBE) processes. The miniaturized multiparameter temperature‒pressure-humidity (TPH) sensor used the MXene@MoS2@Go (MMG) composite to widen the humidity detection range and improve the humidity sensitivity, including a fast response time (3.18 s) and recovery time (0.94 s). The TPH sensor was shown to operate steadily between 25-700 °C, 0-700 kPa, and 10-98% RH. Coupling issues among multiple parameters in complex environments were addressed by decoupling the Δf-temperature coupling factor to improve the accuracy. Therefore, this work can be applied to simultaneous measurements of several environmental parameters in challenging conditions.

6.
J Colloid Interface Sci ; 608(Pt 3): 2493-2504, 2022 Feb 15.
Article in English | MEDLINE | ID: mdl-34785055

ABSTRACT

The development of electronics proposes higher requirements for flexible, transparent, and conductive materials with high electromagnetic shielding performance in viewing windows. Flexible transparent films have been fabricated by collaborating one-dimensional silver nanowires (AgNWs) and novel two-dimensional Ti3C2Tx MXene sheets on PET films with an external polymeric coating consisting of poly (vinyl alcohol) (PVA) and poly(styrene sulfonate) (PSS). Especially, the combination of different dimensional nanomaterials effectively establishes a conductive network that exhibits a synergistic effect on excellent electromagnetic interference (EMI) shielding performance, which is superior to that of pure AgNW network or Ti3C2Tx network to some extent. By optimizing the AgNWs content (0.05 mg/cm2) and Ti3C2Tx sheets content (0.01 mg/cm2), the PET/AgNW/Ti3C2Tx/PVA-PSS film exhibits a transmittance of 81% and a desirable EMI SE value of 30.5 dB. In addition, the film shows outstanding anti-fogging and frost-resistant properties due to the remarkable water absorption capacity of PVA and PSS on the external surface. Considering its efficiency and simplicity, this transparent conductive film has promising applications in flexible transparent electronic devices and optical related fields.

7.
J Colloid Interface Sci ; 607(Pt 2): 1300-1312, 2022 Feb.
Article in English | MEDLINE | ID: mdl-34583035

ABSTRACT

Flexible polyurethane foam (FPUF) is the most used polyurethane, but the highly flammable characteristic limits its widespread usage. In this work, ZIF-8@Ti3C2Txwas synthesized to reduce the heat and toxic gases of FPUF. Flame-retardant FPUF was characterized by cone calorimeter (Cone), thermogravimetric analysis/fourier-transform infrared spectroscopy (TG-FTIR), tensileand compression tests. Compared with pure FPUF, these results showed that the peak of heat release rate (PHRR), total heat release (THR), CO and HCN of FPUF6 decreased by 46%, 69%, 27% and 43.5%, respectively. Moreover, the tensile and compression strength of FPUF6 demonstrated a 52% and 130% increment, respectively. The superior dual metal catalytical charring-forming effect and physical barrier effect of ZIF-8@Ti3C2Tx were achieved. In summary, a simple and reliable strategy for preparing flame-retardant FPUF with reinforced mechanical and fire safety properties was provided.


Subject(s)
Flame Retardants , Polyurethanes , Gases , Polyurethanes/toxicity , Titanium
8.
ACS Appl Mater Interfaces ; 14(33): 37747-37758, 2022 Aug 24.
Article in English | MEDLINE | ID: mdl-35972126

ABSTRACT

Transition metal oxides (TMOs) hold great potential for lithium-ion batteries (LIBs) on account of the high theoretical capacity. Unfortunately, the unfavorable volume expansion and low intrinsic electronic conductivity of TMOs lead to irreversible structural degradation, disordered particle agglomeration, and sluggish electrochemical reaction kinetics, which result in perishing rate capability and long-term stability. This work reports an Fe2O3/MoO3@NG heterostructure composite for LIBs through the uniform growth of Fe2O3/MoO3 heterostructure quantum dots (HQDs) on the N-doped rGO (NG). Due to the synergistic effects of the "couple tree"-type heterostructures constructed by Fe2O3 and MoO3 with NG, Fe2O3/MoO3@NG delivers a prominent rate performance (322 mA h g-1 at 20 A g-1, 5.0 times higher than that of Fe2O3@NG) and long-term cycle stability (433.5 mA h g-1 after 1700 cycles at 10 A g-1). Theoretical calculations elucidate that the strong covalent Fe-O-Mo, Mo-N, and Fe-N bonds weaken the diffusion energy barrier and promote the Li+-ion reaction to Fe2O3/MoO3@NG, thereby facilitating the structural stability, pseudocapacitance contribution, and electrochemical reaction kinetics. This work may provide a feasible strategy to promote the practical application of TMO-based LIBs.

9.
Micromachines (Basel) ; 12(10)2021 Oct 10.
Article in English | MEDLINE | ID: mdl-34683282

ABSTRACT

In order to avoid damage to service satellites and targets during space missions and improve safety and reliability, it is necessary to study how to eliminate or reduce the rotation of targets. This paper focused on a space detumbling robot and studied the space detumbling robot dynamics and robot arm deployment path planning. Firstly, a certain space detumbling robot with a 'platform + manipulator + end effector' configuration is proposed. By considering the end effector as a translational joint, the entire space detumbling robot is equivalent to a link system containing six rotating joints and three translational joints, and the detailed derivation process of the kinematic and dynamic model is presented. Then, ADAMS and MATLAB were used to simulate the model, and the MATLAB results were compared with the ADAMS results to verify the correctness of the model. After that, the robot arm deployment problem was analyzed in detail from the aspects of problem description, constraint analysis and algorithm implementation. An algorithm of robot arm deployment path planning based on the Bi-FMT* algorithm is proposed, and the effectiveness of the algorithm is verified by simulation.

10.
Materials (Basel) ; 14(21)2021 Oct 24.
Article in English | MEDLINE | ID: mdl-34771888

ABSTRACT

The microstructure and texture of materials significantly influence the mechanical properties and fracture behavior; the effect of microstructure in different zones of friction stir-welded joints of 7A52 aluminum alloy on fracture behavior was investigated in this paper. The microstructural characteristics of sections of the welded joints were tested using the electron backscattered diffraction (EBSD) technique. The results indicate that the fracture is located at the advancing side of the thermomechanically affected zone (AS-TMAZ) and the stir zone (SZ) interface. The AS-TMAZ microstructure is vastly different from the microstructure and texture of other areas. The grain orientation is disordered, and the grain shape is seriously deformed under the action of stirring force. The grain size grows unevenly under the input of friction heat, resulting in a large amount of recrystallization, and there is a significant difference in the Taylor factor between adjacent grains and the AS-TMAZ-SZ interface. On the contrary, there are fine and uniform equiaxed grains in the nugget zone, the microstructure is uniform, and the Taylor factor is small at adjacent grains. Therefore, the uneven transition of microstructure and texture in the AS-TMAZ and the SZ provide conditions for crack initiation, which become the weak point of mechanical properties.

11.
ACS Appl Mater Interfaces ; 13(25): 29631-29640, 2021 Jun 30.
Article in English | MEDLINE | ID: mdl-34151569

ABSTRACT

Due to the great advantages of low cost, high capacity, and excellent safety, the Zn metal is a promising candidate material for rechargeable aqueous battery systems. However, its practical applications have been restricted by the uncontrollable dendrite growth and electrode side reactions (such as corrosion, passivation, and hydrogen evolution reactions) during the plating process. Herein, we reveal that the dendrite growth would expose the electrode to more highly active tips, exacerbating the passivation of the electrode and the decomposition of the electrolyte by in situ optical microscopies. We propose a low-cost, nontoxic, low-concentration (less than 1 g/L), and effective electrolyte additive, saccharin sodium, which can guide an even Zn deposition without obvious electrode side reactions in the charge/discharge process. The saccharin anion acts as a "traffic assistant" of Zn2+ and demonstrates its great potential for practical application. The assembled Zn symmetrical battery shows an excellent cycling performance at a high current density and capacity (an extremely long cycle life over 3800 h is obtained at 5 mA/cm2 and 8 mA h/cm2, and 20 mA/cm2 and 5 mA h/cm2 show a lifetime over 800 h), and the full cell (coupled to an AC electrode) presents a stable cycle life with a capacity retention of 86.4% even after 8000 cycles at 5 mA/cm2. The saccharin sodium proposed in this work is promising to solve the anode problems in advanced Zn batteries.

12.
J Colloid Interface Sci ; 588: 164-174, 2021 Apr 15.
Article in English | MEDLINE | ID: mdl-33388582

ABSTRACT

Recently, the increasing demands of the portable devices and flexible electronics have caused lots of electromagnetic wave pollution. MXene, a novel two-dimensional material, was considered as a promising two-dimensional material for preparing flexible electromagnetic interference (EMI) shielding films. Herein, we firstly synthesized a series of flexible and self-healable EMI shielding waterborne polyurethane (ADWPU) films by mechanically blending with Ti3C2Tx (ADWPU-T). Interestingly, the self-assembling between ADWPU and Ti3C2Tx constructed a tunable analogical structure providing reflection-absorption-multiple reflection shielding mechanism. Furthermore, the ADWPU-T emulsions were prepared from castor oil which is a low-cost and eco-friendly biomass polyol. The chain extender 2-aminophenyl disulfide endow a reversible dynamic polymer network which leading to shape memory performance (45°C heat treatment) and self-healing ability (60°C, 5 min healed). Above all, these multifunctional flexible films also exhibited outstanding EMI shielding performance (51.37 dB) and performed less decrement after 200 times bending and 80°C aging test for five days. Therefore, this work would provide a novel promising method for preparing responsive electromagnetic interference shielding products and smart electronic devices.

13.
J Colloid Interface Sci ; 603: 25-36, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34186402

ABSTRACT

Flexible polyurethane foam (FPUF) has been considered as an excellent material in many fields, such as furniture and electromagnetic interference (EMI) shielding products due to its lightweight and flexibility. However, there is a severe fire hazard problem for FPUF that makes it unsuitable to be used in practical. Herein, a facile method was to prepare anti-dripping FPUF via electroless plating at ambient temperature. The silver nanoparticles (SNPs) were in-situ grown on the surface along with the polydopamine (PDA) as an adhesive and template (SNP@PDA@FPUF). As a result, these FPUFs show outstanding fire safety and anti-dripping capacity, and the heat release rate reduced 80.92%. Furthermore, the amounts of carbon oxide (CO) and carbon dioxide (CO2) decreased 75.01% and 22.4%, respectively. Above all, the EMI shielding effectiveness (SE) accomplished almost 120 dB as the increasing electroless time with a low density of 0.051 g/cm3. Furthermore, the specific EMI SE (SSE) and the absolute EMI SE (SSE/t) accomplished 2630.98 dB·cm3/g and 2434 dB·cm2/g, respectively, which was far beyond the commercial request. Therefore, this work may provide a facile way to prepare low density and EMI shielding products with high fire safety for next generation electronic products.


Subject(s)
Metal Nanoparticles , Electromagnetic Radiation , Polyurethanes , Silver , Smoke
14.
J Colloid Interface Sci ; 602: 810-821, 2021 Nov 15.
Article in English | MEDLINE | ID: mdl-34157516

ABSTRACT

Although more and more attention has been paid to electromagnetic interference (EMI) shielding fabric materials due to increasing electromagnetic waves pollution, little attention to their fire safety behavior and durability in practical use. Herein, durable EMI shielding ramie fabric with flame retardant and self-healing performance were fabricated by depositing ammonium polyphosphate (APP)/polyethyleneimine (PEI) layer, MXene sheets and polycaprolactone (PCL) layer. The resultant multifunctional fabric could self-extinguish and the peak heat release rate (pHRR) value reduced about 74.3% for the modified ramie fabric that contains about 12 wt% of PEI/APP bilayer compared with pure ramie fabric. Furthermore, the ramie fabric coated by a increasing amount of MXene sheets changed from insulating to conductive, thus gradually improving their EMI shielding performance, which exhibit a high electrical conductivity of 900.56 S/m with an outstanding SE value of 35 dB at a 1.2 mg/cm2 content in the X-band. Besides, When the multifunctional fabric was cut off under external force, it could achieve self-healing and the EMI shielding performance can recover to 34 dB due to the low melting point and good fluidity of PCL. Thus, this multifunctional fabric holds great promise for wearable intelligent cloth, EMI shielding and other fields.


Subject(s)
Boehmeria , Flame Retardants , Electric Conductivity , Polyphosphates , Textiles
15.
ACS Appl Mater Interfaces ; 13(16): 18876-18886, 2021 Apr 28.
Article in English | MEDLINE | ID: mdl-33871971

ABSTRACT

Boosting sufficient Li+ ion mobility in Li4Ti5O12 (LTO) is crucial for high-rate performance lithium storage. Here, an ultrafast charge storage oxygen vacancy two-dimensional (2D) LTO nanosheet was successfully fabricated through a one-pot hydrothermal method. The selectively doped Al3+ into octahedron Li+/Ti4+ 16d sites not only provide bulk oxygen vacancy and appropriate distorted TiO6 octahedra to facilitate Li+ ions diffusion, but also serve as a "pillar" to stabilize the Ti-O framework. The oxygen vacancy lowers Li+ ion diffusion energy barrier. Moreover, the 2D structure provides open diffusion channels for fast Li+ ion transport. As a result, the sample shows excellent electrochemical performance for bifunctional lithium storage. As a lithium-ion battery anode, the capacity retention reaches 112.8 mA h g-1 after 5000 cycles at 40 C with a fading rate of 0.288% per 100 cycles. Meanwhile, as a lithium-ion capacitor anode, it exhibits an excellent rate capacity of 120 mA h g-1 after 5000 cycles at 500 C with nearly 100% Coulombic efficiency. The produced LTO shows much higher rate capacity and longer lifetime than the reported LTO. Density functional theory calculations also demonstrate that oxygen vacancy can facilitate Li+ ion diffusion kinetics. The relationship between oxygen vacancy content and Li+ ions diffusion energy barrier in LTO is quantified. This work pioneers a defect engineering strategy for synthesized high-performance electrode materials.

16.
ACS Appl Mater Interfaces ; 12(5): 6371-6382, 2020 Feb 05.
Article in English | MEDLINE | ID: mdl-31927938

ABSTRACT

With the rapidly increasing development of portable device hardware and flexible electronics, ultrathin electromagnetic interference (EMI) shielding films with a combination of high flexibility and excellent mechanical properties are noticeably required. In addition to minimizing the electromagnetic wave pollution problem, the fire hazards caused by accidental electrical leakage or aging are also a cause of extensive concern. Inspired by nacre and sandwich structure, herein, we fabricated for the first time an electrical insulating sandwich-structured film based on Ca ion cross-linked sodium alginate (SA)-montmorillonite (MMT) and Ti3C2Tx MXene through a step-by-step vacuum-assisted filtration process. This novel design strategy not only maintains the inner EMI shielding network but also can act as an excellent fire-resistant barrier to protect the electronic device in case of accidental fire. Compared with the pure Ti3C2Tx layer, such kind of sandwich film can effectively maintain the EMI shielding performance (50.01 dB), dramatically enhance the mechanical properties (84.4 MPa), and exhibit excellent fire-resistant performance. Especially, compared with the film composed of mixture, the EMI shielding effectiveness value is only 55% that of sandwich films. Besides, it functions well under long-term heat aging test at 80 °C. Therefore, this unique design provides a novel EMI material strategy to facilitate its future applications in flexible electronics.

17.
J Colloid Interface Sci ; 513: 314-323, 2018 Mar 01.
Article in English | MEDLINE | ID: mdl-29161646

ABSTRACT

Hydrogels are promising 3D materials that have demonstrated increasing applications in the encapsulation and delivery of drugs and cells. Herein we report an injectable colloidal hydrogel that directly assembled by graphene oxide (GO) and thermo-sensitive nanogels (tNG). The pH dependent hydrogen bonding interactions between the carboxyl and oxethyl groups induce the reversible assembly of GO and nanogels. The hydrogel is mouldable and can be shaped into different macroscopic objects, and the mechanical strengths are tunable with pH and temperature adjustment. The hybrid hydrogel by its own possesses high antibacterial activity, and demonstrates responsive drug release behaviour and high viability of 3D encapsulated cells. We expect this hybrid colloidal hydrogel can serve as an interesting scaffold for active cargo delivery and cell culture.


Subject(s)
Anti-Bacterial Agents/administration & dosage , Bone and Bones/cytology , Cell Proliferation/drug effects , Graphite/chemistry , Hydrogels/chemistry , Mesenchymal Stem Cells/cytology , Nanoparticles/administration & dosage , Animals , Anti-Bacterial Agents/chemistry , Bone and Bones/drug effects , Cells, Cultured , Drug Liberation , Mesenchymal Stem Cells/drug effects , Mice , Nanoparticles/chemistry , Temperature
18.
J Mater Chem B ; 5(14): 2671-2678, 2017 Apr 14.
Article in English | MEDLINE | ID: mdl-32264046

ABSTRACT

Nanosized celluloses are attractive building blocks to generate hierarchically advanced materials and have been gradually explored in emulsion applications. Here we report a high internal phase emulsion (HIPE) prepared by using supramolecular cellulose nanocrystals (CNCs) as Pickering stabilisers via one-step emulsification, and interconnected macroporous hybrid hydrogels were produced by utilizing this HIPE as a template. A quadruple hydrogen bonding moiety 2-ureido-4[1H]-pyrimidone (UPy) was firstly grafted onto the surface of cellulose nanocrystals through simple free radical polymerization. The polymer grafting was confirmed by elemental analysis and thermogravimetry. The UPy modified CNCs (CNC-UPy) exhibited superior emulsion stabilising ability compared to the pristine CNCs, and the oil-in-water emulsions with an internal phase volume ratio of 80% showed good long-term stability. The properties of resulting macroporous polyHIPE hydrogels, such as swelling behaviours, porous structures and mechanical strength, were investigated on the dependence of CNC-UPy concentrations. In addition, the macroporous hybrid hydrogel exhibits excellent cytocompatibility and cell adhesion as demonstrated by mouse bone mesenchymal stem cell (mBMSC) culture. With these promising properties, the developed hydrogels demonstrate great potential as active biological scaffolds for tissue engineering.

19.
Zhongguo Xue Xi Chong Bing Fang Zhi Za Zhi ; 26(2): 187-8, 191, 2014 Apr.
Article in Zh | MEDLINE | ID: mdl-25051835

ABSTRACT

OBJECTIVE: To evaluate the effect of Jatropha seed oils extracted by different methods on killing cercaria of Schistosomajaponicum so as to screen the optimum process and formulations. METHODS: The cercaria directly contacting tests with Jatropha seed oils extracted by 6 different extraction processes were carried out, and the mouse immediate contacting cercaria infection trials with different formulations of Jatropha seed oil and various additives were performed. RESULTS: With 95% ethanol, the ratio of material to liquid being 1:8, and 2 h extraction, the oil extraction rate was 30.7%. The cercaria directly contacting tests showed that 6 kinds of Jatropha seed oil killed all cercaria within 30 min. In the mouse immediate contacting cercaria infection trials, the worm declined rate of Jatropha seed oil liquid was 70.97%, and the worm declined rate of the sample added with benzyl benzoate was 58.87%, and the worm declined rate of the sample added with laurocapram was 77.42%. The worm declined rate of the samples added with benzyl benzoate, dibutyl phthalate and laurocapram was 100%. CONCLUSION: The process with 95% ethanol, the ratio of material to liquid being 1:8, and 2 h extraction is the optimum, and the Jatropha seed oil has a good killing schistosome cercaria effect.


Subject(s)
Cercaria/drug effects , Chemical Fractionation/methods , Jatropha/chemistry , Plant Oils/isolation & purification , Plant Oils/pharmacology , Schistosoma japonicum/drug effects , Seeds/chemistry , Animals , Female , Male , Mice
20.
PLoS One ; 7(8): e43163, 2012.
Article in English | MEDLINE | ID: mdl-22905221

ABSTRACT

Haplotype phasing represents an essential step in studying the association of genomic polymorphisms with complex genetic diseases, and in determining targets for drug designing. In recent years, huge amounts of genotype data are produced from the rapidly evolving high-throughput sequencing technologies, and the data volume challenges the community with more efficient haplotype phasing algorithms, in the senses of both running time and overall accuracy. 2SNP is one of the fastest haplotype phasing algorithms with comparable low error rates with the other algorithms. The most time-consuming step of 2SNP is the construction of a maximum spanning tree (MST) among all the heterozygous SNP pairs. We simplified this step by replacing the MST with the initial haplotypes of adjacent heterozygous SNP pairs. The multi-SNP haplotypes were estimated within a sliding window along the chromosomes. The comparative studies on four different-scale genotype datasets suggest that our algorithm WinHAP outperforms 2SNP and most of the other haplotype phasing algorithms in terms of both running speeds and overall accuracies. To facilitate the WinHAP's application in more practical biological datasets, we released the software for free at: http://staff.ustc.edu.cn/~xuyun/winhap/index.htm.


Subject(s)
Computational Biology/methods , Algorithms , Computer Simulation , Drug Design , Genetic Variation , Genomics , Genotype , Haplotypes , Humans , Internet , Models, Statistical , Polymorphism, Single Nucleotide , Reproducibility of Results , Sequence Analysis, DNA/methods , Software
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