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1.
Gen Comp Endocrinol ; 359: 114619, 2024 Oct 03.
Article in English | MEDLINE | ID: mdl-39368757

ABSTRACT

Although bats are the second most species-rich mammalian order, very little is known about their endocrine physiology. Glucocorticoids (GCs) are commonly associated with the stress response, but also modulate vital physiological functions which help animals adapt to their environment. Understanding normal patterns of adrenocortical activity can provide valuable insights into a species' fitness. Non-invasive hormone monitoring via faecal samples provides an integrated measure of adrenocortical activity while minimising stress on the animal but must be properly validated to ensure reliable results. The goal of this study was to validate an enzyme immunoassay for monitoring faecal glucocorticoid metabolites (FGMs) in a common Australian insectivorous bat species, the Gould's wattled bat (Chalinolobus gouldii). We compared the performance of five assays for monitoring changes in FGMs following capture and transfer of C.gouldii from the wild to captivity. Four of the five assays detected a significant increase in FGMs following capture, but the magnitude of the increase and consistency across individuals differed considerably. We selected the UVM-69a assay as the best performing assay to then describe normative patterns of adrenocortical activity in the species. Males had higher FGM levels than females, and juveniles had higher FGM levels than adults. Individuals with poorer body condition had higher FGM levels. We also demonstrate seasonal patterns of FGMs with higher levels in March and April corresponding with reproductive up-regulation and lower levels in May and November. Our study is the first of its kind to examine adrenocortical activity in an Australian insectivorous bat and provides a valuable tool for studying this species. Understanding adrenal function in common species such as C.gouldii can shed light on the physiological mechanisms facilitating survival and success in changing environments.

2.
Int J Audiol ; 58(7): 417-426, 2019 07.
Article in English | MEDLINE | ID: mdl-30957575

ABSTRACT

Objective: To evaluate a system - "the service" - designed to improve mobile telephone communication for people with hearing loss. Design: Each participant registered online and took an online hearing test using their own mobile telephone held in the position of their choice. The test assessed the combined effects of the telephone, the hearing loss of the participant and the hearing aid of the participant (if worn). The results were stored as a "hearing profile" and used to set up frequency-dependent amplification and multichannel amplitude compression. The signal processing was performed in the telephone network and applied to all calls of the participant. Participants completed four questionnaires about their listening experiences using the telephone, one before using the service, two while using the service and one after using the service. Also, the ability to understand speech was measured using challenging sentences. Study sample: Fifty-three participants with varying degrees of hearing loss. Results: The great majority of participants indicated that call clarity was improved and that listening difficulty was reduced when using the service. Speech intelligibility scores were significantly improved when using the service. Conclusions: The service appears to be effective in improving phone communication for people with hearing loss.


Subject(s)
Cell Phone , Correction of Hearing Impairment/instrumentation , Hearing Loss/rehabilitation , Signal Processing, Computer-Assisted/instrumentation , Adult , Aged , Aged, 80 and over , Female , Hearing , Hearing Aids , Hearing Loss/physiopathology , Hearing Tests , Humans , Male , Middle Aged , Speech Intelligibility
4.
Immunology ; 144(4): 549-60, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25314332

ABSTRACT

Antigen-specific multifunctional T cells that secrete interferon-γ, interleukin-2 and tumour necrosis factor-α simultaneously after activation are important for the control of many infections. It is unclear if these CD8(+) T cells are at an early or late stage of differentiation and whether telomere erosion restricts their replicative capacity. We developed a multi-parameter flow cytometric method for investigating the relationship between differentiation (CD45RA and CD27 surface phenotype), function (cytokine production) and replicative capacity (telomere length) in individual cytomegalovirus (CMV) antigen-specific CD8(+) T cells. This involves surface and intracellular cell staining coupled to fluorescence in situ hybridization to detect telomeres (flow-FISH). The end-stage/senescent CD8(+)  CD45RA(+)  CD27(-) T-cell subset increases significantly during ageing and this is exaggerated in CMV immune-responsive subjects. However, these end-stage cells do not have the shortest telomeres, implicating additional non-telomere-related mechanisms in inducing their senescence. The telomere lengths in total and CMV (NLV)-specific CD8(+) T cells in all four subsets defined by CD45RA and CD27 expression were significantly shorter in old compared with young individuals in both a Caucasian and an Asian cohort. Following stimulation by anti-CD3 or NLV peptide, similar proportions of triple-cytokine-producing cells are found in CD8(+) T cells at all stages of differentiation in both age groups. Furthermore, these multi-functional cells had intermediate telomere lengths compared with cells producing only one or two cytokines after activation. Therefore, global and CMV (NLV)-specific CD8(+) T cells that secrete interferon-γ, interleukin-2 and tumour necrosis factor-α are at an intermediate stage of differentiation and are not restricted by excessive telomere erosion.


Subject(s)
Aging/immunology , CD8-Positive T-Lymphocytes/immunology , Cellular Senescence , Cytomegalovirus Infections/immunology , Cytomegalovirus/immunology , Lymphocyte Activation , Telomere Shortening , Telomere/immunology , Adult , Age Factors , Aged , Aged, 80 and over , Aging/ethnology , Aging/genetics , Asian People/genetics , Biomarkers/metabolism , CD8-Positive T-Lymphocytes/metabolism , CD8-Positive T-Lymphocytes/virology , Cell Differentiation , Cell Proliferation , Cells, Cultured , Cytokines/immunology , Cytokines/metabolism , Cytomegalovirus/pathogenicity , Cytomegalovirus Infections/genetics , Cytomegalovirus Infections/metabolism , Cytomegalovirus Infections/virology , Flow Cytometry , Humans , Immunophenotyping/methods , Leukocyte Common Antigens/immunology , Leukocyte Common Antigens/metabolism , London , Phenotype , Singapore , Telomere/genetics , Tumor Necrosis Factor Receptor Superfamily, Member 7/immunology , Tumor Necrosis Factor Receptor Superfamily, Member 7/metabolism , White People/genetics , Young Adult
5.
Biol Lett ; 11(8)2015 Aug.
Article in English | MEDLINE | ID: mdl-26246334

ABSTRACT

Accurate survival estimates are needed to construct robust population models, which are a powerful tool for understanding and predicting the fates of species under scenarios of environmental change. Microbats make up 17% of the global mammalian fauna, yet the processes that drive differences in demographics between species are poorly understood. We collected survival estimates for 44 microbat species from the literature and constructed a model to determine the effects of reproductive, feeding and demographic traits on survival. Our trait-based model indicated that bat species which produce more young per year exhibit lower apparent annual survival, as do males and juveniles compared with females and adults, respectively. Using 8 years of monitoring data for two Australian species, we demonstrate how knowledge about the effect of traits on survival can be incorporated into Bayesian survival analyses. This approach can be applied to any group and is not restricted to bats or even mammals. The incorporation of informative priors based on traits can allow for more timely construction of population models to support management decisions and actions.


Subject(s)
Chiroptera/physiology , Age Factors , Animals , Australia , Bayes Theorem , Female , Longevity , Male , Models, Biological , Population Dynamics , Reproduction , Sex Factors
6.
J Immunol ; 190(11): 5363-72, 2013 Jun 01.
Article in English | MEDLINE | ID: mdl-23636061

ABSTRACT

The mechanisms regulating memory CD8(+) T cell function and homeostasis during aging are unclear. CD8(+) effector memory T cells that re-express CD45RA increase considerably in older humans and both aging and persistent CMV infection are independent factors in this process. We used MHC class I tetrameric complexes that were mutated in the CD8 binding domain to identify CMV-specific CD8(+) T cells with high Ag-binding avidity. In individuals who were HLA-A*0201, CD8(+) T cells that expressed CD45RA and were specific for the pp65 protein (NLVPMVATV epitope) had lower avidity than those that expressed CD45RO and demonstrated decreased cytokine secretion and cytolytic potential after specific activation. Furthermore, low avidity NLVPMVATV-specific CD8(+) T cells were significantly increased in older individuals. The stimulation of blood leukocytes with CMV lysate induced high levels of IFN-α that in turn induced IL-15 production. Moreover, the addition of IL-15 to CD45RA(-)CD45RO(+) CMV-specific CD8(+) T cells induced CD45RA expression while Ag activated cells remained CD45RO(+). This raises the possibility that non-specific cytokine-driven accumulation of CMV-specific CD8(+)CD45RA(+) T cells with lower Ag-binding avidity may exacerbate the effects of viral reactivation on skewing the T cell repertoire in CMV-infected individuals during aging.


Subject(s)
CD8-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/metabolism , Cytomegalovirus Infections/immunology , Cytomegalovirus/immunology , Leukocyte Common Antigens/metabolism , Age Factors , Antibody Affinity/immunology , Antigens/immunology , Antigens/metabolism , Dendritic Cells/immunology , Dendritic Cells/metabolism , HLA-A2 Antigen/immunology , HLA-A2 Antigen/metabolism , Humans , Immunophenotyping , Interferon-alpha/biosynthesis , Interleukin-15/immunology , Interleukin-15/metabolism , Lymphocyte Activation/immunology , Monocytes/immunology , Monocytes/metabolism , Phosphoproteins/immunology , Viral Matrix Proteins/immunology
7.
Biol Lett ; 10(6)2014 Jun.
Article in English | MEDLINE | ID: mdl-24899683

ABSTRACT

How climate impacts organisms depends not only on their physiology, but also whether they can buffer themselves against climate variability via their behaviour. One of the way species can withstand hot temperatures is by seeking out cool microclimates, but only if their habitat provides such refugia. Here, we describe a novel thermoregulatory strategy in an arboreal mammal, the koala Phascolarctos cinereus. During hot weather, koalas enhanced conductive heat loss by seeking out and resting against tree trunks that were substantially cooler than ambient air temperature. Using a biophysical model of heat exchange, we show that this behaviour greatly reduces the amount of heat that must be lost via evaporative cooling, potentially increasing koala survival during extreme heat events. While it has long been known that internal temperatures of trees differ from ambient air temperatures, the relevance of this for arboreal and semi-arboreal mammals has not previously been explored. Our results highlight the important role of tree trunks as aboveground 'heat sinks', providing cool local microenvironments not only for koalas, but also for all tree-dwelling species.


Subject(s)
Behavior, Animal/physiology , Body Temperature Regulation/physiology , Microclimate , Phascolarctidae/physiology , Animals , Ecosystem , Hot Temperature , Trees
8.
Ecotoxicol Environ Saf ; 99: 28-34, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24176292

ABSTRACT

Wildlife and livestock that ingest bioavailable cyanide compounds in gold mining tailings dams are known to experience cyanide toxicosis. Elevated levels of salinity in open impoundments have been shown to prevent wildlife cyanide toxicosis by reducing drinking and foraging. This finding appears to be consistent for diurnal wildlife interacting with open impoundments, however the risks to nocturnal wildlife of cyanide exposure are unknown. We investigated the activity of insectivorous bats in the airspace above both fresh (potable to wildlife) and saline water bodies at two gold mines in the goldfields of Western Australian. During this study, cyanide-bearing solutions stored in open impoundments at both mine sites were hypersaline (range=57,000-295,000 mg/L total dissolved solids (TDS)), well above known physiological tolerance of any terrestrial vertebrate. Bats used the airspace above each water body monitored, but were more active at fresh than saline water bodies. In addition, considerably more terminal echolocation buzz calls were recorded in the airspace above fresh than saline water bodies at both mine sites. However, it was not possible to determine whether these buzz calls corresponded to foraging or drinking bouts. No drinking bouts were observed in 33 h of thermal video footage recorded at one hypersaline tailings dam, suggesting that this water is not used for drinking. There is no information on salinity tolerances of bats, but it could be assumed that bats would not tolerate salinity in drinking water at concentrations greater than those documented as toxic for saline-adapted terrestrial wildlife. Therefore, when managing wastewater impoundments at gold mines to avoid wildlife mortalities, adopting a precautionary principle, bats are unlikely to drink solutions at salinity levels ≥50,000 mg/L TDS.


Subject(s)
Chiroptera/physiology , Cyanides/toxicity , Drinking Behavior , Environmental Exposure/prevention & control , Mining , Salinity , Wastewater/toxicity , Animals , Australia , Gold , Wastewater/chemistry
9.
R Soc Open Sci ; 10(3): 221436, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36998760

ABSTRACT

Natural light-dark cycles synchronize an animal's internal clock with environmental conditions. The introduction of artificial light into the night-time environment masks natural light cues and has the potential to disrupt this well-established biological rhythm. Nocturnal animal species, such as bats, are adapted to low light conditions and are therefore among the most vulnerable to the impacts of artificial light at night (ALAN). The behaviour and activity of insectivorous bats is disrupted by short-wavelength artificial light at night, while long-wavelength light is less disruptive. However, the physiological consequences of this lighting have not been investigated. Here, we examine the effect of LEDs with different spectra on urinary melatonin in an insectivorous bat. We collected voluntarily voided urine samples from Gould's wattled bats (Chalinolobus gouldii) and measured melatonin-sulfate under ambient night-time conditions (baseline) and under red (λP 630 nm), amber (λP 601 nm), filtered warm white (λP 586 nm) and cool white (λP 457 nm) LEDs. We found no effect of light treatment on melatonin-sulfate irrespective of spectra. Our findings suggest that short-term exposure to LEDs at night do not disrupt circadian physiology in the light-exploiting Gould's wattled bat.

10.
medRxiv ; 2023 Jun 27.
Article in English | MEDLINE | ID: mdl-37425807

ABSTRACT

Background: Tacrolimus therapy is standard of care for immunosuppression after lung transplantation. However, tacrolimus exposure variability during the early postoperative period may contribute to poor outcomes in this population. Few studies have examined tacrolimus pharmacokinetics (PK) during this high-risk time period. Methods: We conducted a retrospective pharmacokinetic study in lung transplant recipients at the University of Pennsylvania who were enrolled in the Lung Transplant Outcomes Group (LTOG) cohort. We derived a model in 270 patients using NONMEM (version 7.5.1) and examined validity in a separate cohort of 114 patients. Covariates were examined with univariate analysis and multivariable analysis was developed using forward and backward stepwise selection. Performance of the final model in the validation cohort was examined with calculation of mean prediction error (PE). Results: We developed a one-compartment base model with a fixed rate absorption constant. Significant covariates in multivariable analysis were postoperative day, hematocrit, transplant type, CYP3A5 genotype, total body weight, and time-varying postoperative day, hematocrit, and CYP inhibitor drugs. The strongest predictor of tacrolimus clearance was postoperative day, with median predicted clearance increasing more than threefold over the 14 day study period. In the validation cohort, the final model showed a mean PE of 36.4% (95%CI 30.8%-41.9%) and a median PE of 7.2% (IQR -29.3%-70.53%). Conclusion: Postoperative day was the strongest predictor of tacrolimus exposure in the early post-lung transplant period. Future multicenter studies employing intensive sampling to examine a broad set of variables related to critical illness physiology are needed to understand determinants of clearance, volume of distribution and absorption in this population.

11.
J Immunol ; 184(7): 3417-23, 2010 Apr 01.
Article in English | MEDLINE | ID: mdl-20176738

ABSTRACT

Short telomeres of circulating leukocytes are a risk factor for age-related diseases, such as atherosclerosis, but the exact mechanisms generating variations in telomere length are unknown. We hypothesized that induction of differentiated T cells during chronic CMV infection would affect T cell telomere length. To test this, we measured the amount of differentiated T cells and telomere length of lymphocytes during primary CMV infection as well as CMV-seropositive and -seronegative healthy individuals. After primary CMV infection, we observed an increase in highly differentiated cells that coincided with a steep drop in telomere length. Moreover, we found in a cohort of 159 healthy individuals that telomere shortening was more rapid in CMV-seropositive individuals and correlated with the amount of differentiated T cells in both CD4(+) T cells and CD8(+) T cells. Finally, we found that telomere length measured in blood leukocytes is correlated with lymphocyte telomere length. Thus, CMV infection induces a strong decrease in T cell telomere length, which can be explained by changes in the composition of the circulating lymphocyte pool.


Subject(s)
Cytomegalovirus Infections/immunology , T-Lymphocyte Subsets/pathology , T-Lymphocytes/pathology , Telomere/pathology , Adult , Aged , Aged, 80 and over , Antiviral Agents/therapeutic use , Cell Differentiation/immunology , Cell Separation , Cytomegalovirus Infections/genetics , Cytomegalovirus Infections/pathology , DNA, Viral/blood , Flow Cytometry , Fluorescent Antibody Technique , Ganciclovir/therapeutic use , Humans , In Situ Hybridization, Fluorescence , Kidney Transplantation/adverse effects , Kidney Transplantation/immunology , Middle Aged , Polymerase Chain Reaction , T-Lymphocyte Subsets/immunology , T-Lymphocytes/immunology , Telomere/virology , Viremia/drug therapy , Young Adult
12.
Blood ; 113(26): 6619-28, 2009 Jun 25.
Article in English | MEDLINE | ID: mdl-19406987

ABSTRACT

Highly differentiated CD8+CD28-CD27- T cells have short telomeres, defective telomerase activity, and reduced capacity for proliferation, indicating that they are close to replicative senescence. In addition, these cells express increased levels of the senescence-associated inhibitory receptor KLRG1 and have poor capacity for IL-2 synthesis and defective Akt (ser(473)) phosphorylation after activation. It is not known whether signaling via KLRG1 contributes to any of the attenuated differentiation-related functional changes in CD8+ T cells. To address this, we blocked KLRG1 signaling during T-cell receptor activation using antibodies against its major ligand, E-cadherin. This resulted in a significant enhancement of Akt (ser(473)) phosphorylation and T-cell receptor-induced proliferative activity of CD8+CD28-CD27- T cells. Furthermore, the increase of proliferation was directly linked to the Akt-mediated induction of cyclin D and E and reduction in the cyclin inhibitor p27 expression. In contrast, the reduced telomerase activity in highly differentiated CD8+CD28(-)CD27- T cells was not altered by KLRG1 blockade, indicating the involvement of other mechanisms. This is the first demonstration of a functional role for KLRG1 in primary human CD8+ T cells and highlights that certain functional defects that arise during progressive T-cell differentiation toward replicative senescence are maintained actively by inhibitory receptor signaling.


Subject(s)
Aging/immunology , CD8-Positive T-Lymphocytes/immunology , Lectins, C-Type/physiology , Protein Processing, Post-Translational , Proto-Oncogene Proteins c-akt/metabolism , Trans-Activators/physiology , Adult , Aged , CD28 Antigens/analysis , CD8-Positive T-Lymphocytes/cytology , CD8-Positive T-Lymphocytes/enzymology , Cadherins/antagonists & inhibitors , Cell Differentiation , Cellular Senescence , Cyclin D2 , Cyclin E/biosynthesis , Cyclin E/genetics , Cyclin-Dependent Kinase Inhibitor p27/biosynthesis , Cyclin-Dependent Kinase Inhibitor p27/genetics , Cyclins/biosynthesis , Cyclins/genetics , Female , Humans , Lectins, C-Type/antagonists & inhibitors , Lymphocyte Activation , Male , Middle Aged , Phosphoinositide-3 Kinase Inhibitors , Phosphorylation , Phosphoserine/analysis , Proto-Oncogene Proteins c-akt/antagonists & inhibitors , Receptors, Immunologic , Telomere/ultrastructure , Trans-Activators/antagonists & inhibitors , Tumor Necrosis Factor Receptor Superfamily, Member 7/analysis , Young Adult
13.
Immun Ageing ; 8(1): 10, 2011 Oct 28.
Article in English | MEDLINE | ID: mdl-22035114

ABSTRACT

The Second International Workshop on CMV & Immunosenescence was held in Cambridge, UK, 2-4th December, 2010. The presentations covered four separate sessions: cytomegalovirus and T cell phenotypes; T cell memory frequency, inflation and immunosenescence; cytomegalovirus in aging, mortality and disease states; and the immunobiology of cytomegalovirus-specific T cells and effects of the virus on vaccination. This commentary summarizes the major findings of these presentations and references subsequently published work from the presenter laboratory where appropriate and draws together major themes that were subsequently discussed along with new areas of interest that were highlighted by this discussion.

14.
J Air Waste Manag Assoc ; 61(11): 1236-45, 2011 Nov.
Article in English | MEDLINE | ID: mdl-22168107

ABSTRACT

Contributions of the emissions from a U.K. regulated fossil-fuel power station to regional air pollution and deposition are estimated using four air quality modeling systems for the year 2003. The modeling systems vary in complexity and emphasis in the way they treat atmospheric and chemical processes, and include the Community Multiscale Air Quality (CMAQ) modeling system in its versions 4.6 and 4.7, a nested modeling system that combines long- and short-range impacts (referred to as TRACK-ADMS [Trajectory Model with Atmospheric Chemical Kinetics-Atmospheric Dispersion Modelling System]), and the Fine Resolution Atmospheric Multi-pollutant Exchange (FRAME) model. An evaluation of the baseline calculations against U.K. monitoring network data is performed. The CMAQ modeling system version 4.6 data set is selected as the reference data set for the model footprint comparison. The annual mean air concentration and total deposition footprints are summarized for each modeling system. The footprints of the power station emissions can account for a significant fraction of the local impacts for some species (e.g., more than 50% for SO2 air concentration and non-sea-salt sulfur deposition close to the source) for 2003. The spatial correlation and the coefficient of variation of the root mean square error (CVRMSE) are calculated between each model footprint and that calculated by the CMAQ modeling system version 4.6. The correlation coefficient quantifies model agreement in terms of spatial patterns, and the CVRMSE measures the magnitude of the difference between model footprints. Possible reasons for the differences between model results are discussed. Finally, implications and recommendations for the regulatory assessment of the impact of major industrial sources using regional air quality modeling systems are discussed in the light of results from this case study.


Subject(s)
Air Pollution/analysis , Environmental Monitoring/methods , Models, Theoretical , Power Plants , United Kingdom
15.
J Vis Exp ; (178)2021 12 29.
Article in English | MEDLINE | ID: mdl-35037664

ABSTRACT

Sampling methods are selected depending on the targeted species or the spatial and temporal requirements of the study. However, most methods for passive sampling of flying insects have a poor temporal resolution because it is time-consuming, costly and/or logistically difficult to perform. Effective sampling of flying insects attracted to artificial light at night (ALAN) requires sampling at user-defined time points (nighttime only) across well-replicated sites resulting in major time and labor-intensive survey effort or expensive automated technologies. Described here is a low-cost automated intercept trap that requires no specialist equipment or skills to construct and operate, making it a viable option for studies that require temporal sub-sampling across multiple sites. The trap can be used to address a wide range of other ecological questions that require a greater temporal and spatial scale than is feasible with previous trap technology.


Subject(s)
Insecta , Light Pollution , Animals , Flight, Animal
16.
Proteomics ; 10(18): 3321-42, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20706980

ABSTRACT

Leukaemic transformation is frequently associated with the aberrant activity of a protein tyrosine kinase (PTK). As such it is of clinical relevance to be able to map the effects of these leukaemogenic PTKs on haemopoietic cells at the level of phosphorylation modulation. In this paradigm study we have employed a range of proteomic approaches to analyse the effects of one such PTK, BCR/ABL. We have employed phosphoproteome enrichment techniques allied to peptide and protein quantification to identify proteins and pathways involved in cellular transformation. Amongst the proteins shown to be regulated at the post-translational level were cofilin, an actin-severing protein thus linked to altered motility and Cbl an E3 ubiquitin ligase integrally linked to the control of tyrosine kinase signalling (regulated by 5 and 6 PTKs respectively). The major class of proteins identified however were molecular chaperones. We also showed that HSP90 phosphorylation is altered by BCR/ABL action and that HSP90 plays a crucial role in oncogene stability. Further investigation with another six leukaemogenic PTKs demonstrates that this HSP90 role in oncogene stability appears to be a common phenomenon in a range of leukaemias. This opens up the potential opportunity to treat different leukaemias with HSP90 inhibitors.


Subject(s)
Fusion Proteins, bcr-abl/metabolism , Phosphoproteins/analysis , Signal Transduction , Amino Acid Sequence , Animals , Cell Line , HSP90 Heat-Shock Proteins/metabolism , Mice , Molecular Sequence Data , Phosphoproteins/chemistry , Phosphoproteins/metabolism , Phosphorylation , Protein Binding , Proteomics
17.
Mol Cell Proteomics ; 7(5): 853-63, 2008 May.
Article in English | MEDLINE | ID: mdl-17951628

ABSTRACT

There are a number of leukemogenic protein-tyrosine kinases (PTKs) associated with leukemic transformation. Although each is linked with a specific disease their functional activity poses the question whether they have a degree of commonality in their effects upon target cells. Exon array analysis of the effects of six leukemogenic PTKs (BCR/ABL, TEL/PDGFRbeta, FIP1/PDGFRalpha, D816V KIT, NPM/ALK, and FLT3ITD) revealed few common effects on the transcriptome. It is apparent, however, that proteome changes are not directly governed by transcriptome changes. Therefore, we assessed and used a new generation of iTRAQ tagging, enabling eight-channel relative quantification discovery proteomics, to analyze the effects of these six leukemogenic PTKs. Again these were found to have disparate effects on the proteome with few common targets. BCR/ABL had the greatest effect on the proteome and had more effects in common with FIP1/PDGFRalpha. The proteomic effects of the four type III receptor kinases were relatively remotely related. The only protein commonly affected was eosinophil-associated ribonuclease 7. Five of six PTKs affected the motility-related proteins CAPG and vimentin, although this did not correspond to changes in motility. However, correlation of the proteomics data with that from the exon microarray not only showed poor levels of correlation between transcript and protein levels but also revealed alternative patterns of regulation of the CAPG protein by different oncogenes, illustrating the utility of such a combined approach.


Subject(s)
Leukemia/enzymology , Mass Spectrometry/methods , Oncogene Proteins/metabolism , Protein Serine-Threonine Kinases/metabolism , Proteome/analysis , Proteomics/methods , Animals , Cell Line , Chemotaxis , Exons , Gene Expression Profiling , Leukemia/genetics , Mice , Oligonucleotide Array Sequence Analysis , Oncogene Proteins/genetics , Protein Biosynthesis/genetics , Protein Serine-Threonine Kinases/genetics , Proteome/genetics , Proteome/metabolism
18.
Sci Rep ; 10(1): 6210, 2020 04 10.
Article in English | MEDLINE | ID: mdl-32277114

ABSTRACT

Nest boxes are often used to provide supplementary roosts for cavity-dependent wildlife, but little is known about if they influence faunal community composition. Long-term monitoring of bat boxes in south-eastern Australia indicated that their use was dominated by one generalist species (Chalinolobus gouldii), causing concern that installing bat boxes could cause a shift toward less diverse bat communities. To test this, we conducted a large-scale before-after control-impact experiment at 18 sites, over five years. Sites were either: (1) those with existing bat boxes, (2) those where boxes were added during the study, or (3) controls without boxes. We used echolocation call data from 9035 bat detector nights to compare community composition, diversity, and species' relative activity between the sites. Chalinolobus gouldii continued to dominate the use of existing boxes, but we found little difference in community composition between sites based on the presence, absence, or addition of boxes. Our study is the first to explore the influence installing artificial hollows has on localized faunal assemblages over spatio-temporal scales relevant to management. We conclude that there is cause for optimism that bat boxes might not have perverse outcomes on local community composition in the short- to medium-term, as we had feared.


Subject(s)
Chiroptera/physiology , Nesting Behavior , Animals , Animals, Wild/physiology , Biodiversity , Echolocation , Endangered Species , Female , Male , South Australia , Species Specificity
19.
Oper Neurosurg (Hagerstown) ; 18(1): 69-74, 2020 01 01.
Article in English | MEDLINE | ID: mdl-31294451

ABSTRACT

BACKGROUND: Ventriculostomy-related infection (VRI) is a feared complication of external ventricular drain (EVD) placement. Although many contributing factors to VRI have been examined, little is known whether there is an association between ventriculostomy-related catheter tract hemorrhage (VCTH) and VRI. OBJECTIVE: To evaluate risk factors for VRI and assess possible correlations with VCTH. METHODS: We performed a retrospective analysis of patients with EVD placement in a neurocritical care unit between 2011 and 2015. VRI was defined as clinical signs of infection with a positive cerebrospinal fluid gram stain and isolation of cerebrospinal fluid culture. VCTH was diagnosed by computed tomography immediately after EVD insertion. RESULTS: A total of 247 patients with EVD were identified during the 5-yr study period. An association between VCTH and gram-negative VRI was identified (P = .02). Ten percent (25 of 247 patients) developed a VRI, and 7% (18 of 247 patients) had a VCTH. Of the 25 patients with VRI, 20% (n = 5) had a VCTH, compared to 6% (n = 13) of 222 patients who had an EVD placed but did not develop VRI. There were no significant differences in demographic and clinical factors except for multiple EVD insertions (P < .00001), EVD duration (P < .001), and hospital length of stay (P < .001). CONCLUSION: VCTH is a potentially significant risk factor for VRI. Further analysis will be needed to confirm the strength of this association, and to delineate the possible mechanisms by which tract hemorrhage may serve as a nidus for bacterial penetration into the central nervous system.


Subject(s)
Bacterial Infections/epidemiology , Catheters, Indwelling/adverse effects , Cerebral Hemorrhage/epidemiology , Surgical Wound Infection/epidemiology , Ventriculostomy/adverse effects , Cerebral Hemorrhage/etiology , Female , Humans , Length of Stay , Male , Middle Aged , Retrospective Studies , Risk Factors
20.
Ecotoxicol Environ Saf ; 72(5): 1579-86, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19356799

ABSTRACT

Patterns of wildlife visitation and interaction with cyanide-bearing tailings slurry and solutions at the Fimiston tailings storage facility (TSF) have been reported in a previously published ecological study. The above-mentioned findings are extended in this paper by the examination of additional wildlife survey data, along with process water chemistry data collected during the same study period. Analysis of the combined results revealed that the primary wildlife protective mechanism in operation was effective management of tailings cyanide concentration. Nevertheless, tailings discharge concentration exceeded the industry standard wildlife protective limit of 50mg/L weak acid dissociable (WAD) cyanide episodically during the study period. Wildlife that interacted with habitats close to the spigot outlet during brief periods of increased discharge concentration were likely to have been exposed to bioavailable cyanide at concentrations greater than the industry standard protective limit. However, no wildlife deaths were recorded. These results appear to support the hypothesis that hypersalinity of process solutions (unique to the Kalgoorlie district of Western Australia) and a lack of aquatic food resources represent secondary protective mechanisms that operated to prevent cyanide-related wildlife mortality during the project. The proposed protective mechanisms are discussed in the context of their potential application as proactive management procedures to minimise wildlife exposure to cyanide.


Subject(s)
Birds , Cyanides/poisoning , Gold , Industrial Waste/adverse effects , Mining , Water Pollutants, Chemical/poisoning , Animals , Biological Availability , Cyanides/metabolism , Data Collection , Environmental Monitoring/methods , Food Chain , Fresh Water/chemistry , Invertebrates/drug effects , Risk Assessment , Risk Factors , Salinity , Water Pollutants, Chemical/metabolism , Western Australia
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