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1.
J Intellect Disabil Res ; 67(10): 986-1002, 2023 10.
Article in English | MEDLINE | ID: mdl-37344986

ABSTRACT

BACKGROUND: No previous studies have reported predictors and moderators of outcome of psychological therapies for depression experienced by adults with intellectual disabilities (IDs). We investigated baseline variables as outcome predictors and moderators based on a randomised controlled trial where behavioural activation was compared with guided self-help. METHODS: This study was an exploratory secondary data analysis of data collected during a randomised clinical trial. Participants (n = 161) were randomised to behavioural activation or guided self-help and followed up for 12 months. Pre-treatment variables were included if they have previously been shown to be associated with an increased risk of having depression in adults with IDs or have been reported as a potential predictor or moderator of outcome of treatment for depression with psychological therapies. The primary outcome measure, the Glasgow Depression Scale for Adults with Learning Disabilities (GDS-LD), was used as the dependant variable in mixed effects regression analyses testing for predictors and moderators of outcome, with baseline GDS-LD, treatment group, study centre and antidepressant use as fixed effects, and therapist as a random effect. RESULTS: Higher baseline anxiety (mean difference in outcome associated with a 1 point increase in anxiety 0.164, 95% confidence interval [CI] 0.031, 0.297; P = 0.016), lower performance intelligence quotient (IQ) (mean difference in outcome associated with a 1 point increase in IQ 0.145, 95% CI 0.009, 0.280; P = 0.037) and hearing impairment (mean difference 3.449, 95% CI 0.466, 6.432; P = 0.024) were predictors of poorer outcomes, whilst greater severity of depressive symptoms at baseline (mean difference in outcome associated with 1 point increase in depression -0.160, 95% CI -0.806, -0.414; P < 0.001), higher expectation of change (mean difference in outcome associated with a 1 point increase in expectation of change -1.013, 95% CI -1.711, -0.314; p 0.005) and greater percentage of therapy sessions attended (mean difference in outcome with 1 point increase in percentage of sessions attended -0.058, 95% CI -0.099, -0.016; P = 0.007) were predictors of more positive outcomes for treatment after adjusting for randomised group allocation. The final model included severity of depressive and anxiety symptoms, lower WASI performance IQ subscale, hearing impairment, higher expectation of change and percentage of therapy sessions attended and explained 35.3% of the variance in the total GDS-LD score at 12 months (R2  = 0.353, F4, 128  = 17.24, P < 0.001). There is no evidence that baseline variables had a moderating effect on outcome for treatment with behavioural activation or guided self-help. CONCLUSIONS: Our results suggest that baseline variables may be useful predictors of outcomes of psychological therapies for adults with IDs. Further research is required to examine the value of these potential predictors. However, our findings suggest that therapists consider how baseline variables may enable them to tailor their therapeutic approach when using psychological therapies to treat depression experienced by adults with IDs.


Subject(s)
Depression , Intellectual Disability , Adult , Humans , Depression/therapy , Intellectual Disability/therapy , Intellectual Disability/psychology , Behavior Therapy/methods , Anxiety , Health Behavior
2.
BMC Vet Res ; 13(1): 171, 2017 Jun 12.
Article in English | MEDLINE | ID: mdl-28606148

ABSTRACT

BACKGROUND: The objective of the current study was to develop a stochastic agent-based model using empirical data from Ontario (Canada) swine sites in order to evaluate different surveillance strategies for detection of emerging porcine reproductive and respiratory syndrome virus (PRRSV) strains at the regional level. Four strategies were evaluated, including (i) random sampling of fixed numbers of swine sites monthly; (ii) risk-based sampling of fixed numbers, specifically of breeding sites (high-consequence sites); (iii) risk-based sampling of fixed numbers of low biosecurity sites (high-risk); and (iv) risk-based sampling of breeding sites that are characterized as low biosecurity sites (high-risk/high-consequence). The model simulated transmission of a hypothetical emerging PRRSV strain between swine sites through three important industry networks (production system, truck and feed networks) while considering sites' underlying immunity due to past or recent exposure to heterologous PRRSV strains, as well as demographic, geographic and biosecurity-related PRRS risk factors. Outcomes of interest included surveillance system sensitivity and time to detection of the three first cases over a period of approximately three years. RESULTS: Surveillance system sensitivities were low and time to detection of three first cases was long across all examined scenarios. CONCLUSION: Traditional modes of implementing high-risk and high-consequence risk-based surveillance based on site's static characteristics do not appear to substantially improve surveillance system sensitivity. Novel strategies need to be developed and considered for rapid detection of this and other emerging swine infectious diseases. None of the four strategies compared herein appeared optimal for early detection of an emerging PPRSV strain at the regional level considering model assumptions, the underlying population of interest, and absence of other forms of surveillance.


Subject(s)
Communicable Diseases, Emerging/veterinary , Epidemiological Monitoring/veterinary , Models, Biological , Porcine Reproductive and Respiratory Syndrome/virology , Porcine respiratory and reproductive syndrome virus , Animals , Canada/epidemiology , Communicable Diseases, Emerging/virology , Computer Simulation , Porcine Reproductive and Respiratory Syndrome/transmission , Stochastic Processes , Swine
3.
Biochemistry ; 54(22): 3528-42, 2015 Jun 09.
Article in English | MEDLINE | ID: mdl-25962980

ABSTRACT

In this work, we obtain the data needed to predict chemical interactions of polyethylene glycols (PEGs) and glycerol with proteins and related organic compounds and thereby interpret or predict chemical effects of PEGs on protein processes. To accomplish this, we determine interactions of glycerol and tetraEG with >30 model compounds displaying the major C, N, and O functional groups of proteins. Analysis of these data yields coefficients (α values) that quantify interactions of glycerol, tetraEG, and PEG end (-CH2OH) and interior (-CH2OCH2-) groups with these groups, relative to interactions with water. TetraEG (strongly) and glycerol (weakly) interact favorably with aromatic C, amide N, and cationic N, but unfavorably with amide O, carboxylate O, and salt ions. Strongly unfavorable O and salt anion interactions help make both small and large PEGs effective protein precipitants. Interactions of tetraEG and PEG interior groups with aliphatic C are quite favorable, while interactions of glycerol and PEG end groups with aliphatic C are not. Hence, tetraEG and PEG300 favor unfolding of the DNA-binding domain of lac repressor (lacDBD), while glycerol and di- and monoethylene glycol are stabilizers. Favorable interactions with aromatic and aliphatic C explain why PEG400 greatly increases the solubility of aromatic hydrocarbons and steroids. PEG400-steroid interactions are unusually favorable, presumably because of simultaneous interactions of multiple PEG interior groups with the fused ring system of the steroid. Using α values reported here, chemical contributions to PEG m-values can be predicted or interpreted in terms of changes in water-accessible surface area (ΔASA) and separated from excluded volume effects.


Subject(s)
Escherichia coli Proteins/chemistry , Glycerol/chemistry , Lac Repressors/chemistry , Models, Chemical , Polyethylene Glycols/chemistry
4.
Biopolymers ; 103(9): 517-27, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25924886

ABSTRACT

Small and large PEGs greatly increase chemical potentials of globular proteins (µ2), thereby favoring precipitation, crystallization, and protein-protein interactions that reduce water-accessible protein surface and/or protein-PEG excluded volume. To determine individual contributions of PEG-protein chemical and excluded volume interactions to µ2 as functions of PEG molality m3 , we analyze published chemical potential increments µ23 = dµ2/dm3 quantifying unfavorable interactions of PEG (PEG200-PEG6000) with BSA and lysozyme. For both proteins, µ23 increases approximately linearly with the number of PEG residues (N3). A 1 molal increase in concentration of PEG -CH2 OCH2 - groups, for any chain-length PEG, increases µBSA by ∼2.7 kcal/mol and µlysozyme by ∼1.0 kcal/mol. These values are similar to predicted chemical interactions of PEG -CH2 OCH2 - groups with these protein components (BSA ∼3.3 kcal/mol, lysozyme ∼0.7 kcal/mol), dominated by unfavorable interactions with amide and carboxylate oxygens and counterions. While these chemical effects should be dominant for small PEGs, larger PEGS are expected to exhibit unfavorable excluded volume interactions and reduced chemical interactions because of shielding of PEG residues in PEG flexible coils. We deduce that these excluded volume and chemical shielding contributions largely compensate, explaining why the dependence of µ23 on N3 is similar for both small and large PEGs.


Subject(s)
Polyethylene Glycols/chemistry , Polyethylene Glycols/metabolism , Proteins/chemistry , Proteins/metabolism , Animals , Cattle , DNA , Muramidase/chemistry , Muramidase/metabolism , Protein Binding , Serum Albumin, Bovine/chemistry , Serum Albumin, Bovine/metabolism , Thermodynamics
5.
Anim Genet ; 45(2): 297-300, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24303974

ABSTRACT

Ovine lentivirus (OvLV) is a macrophage-tropic lentivirus found in many countries that causes interstitial pneumonia, mastitis, arthritis and cachexia in sheep. There is no preventive vaccine and no cure, but breed differences suggest marker-assisted selective breeding might improve odds of infection and control of OvLV post-infection. Although variants in TMEM154 have consistent association with odds of infection, no variant in any gene has been associated with host control of OvLV post-infection in multiple animal sets. Proviral concentration is a live-animal diagnostic measure of OvLV control post-infection related to severity of OvLV-induced lesions. A recent genome-wide association study identified a region including four zinc finger genes associated with proviral concentration in one Rambouillet flock. To refine this region, we tested additional variants and identified a small insertion/deletion variant near ZNF389 that showed consistent association with proviral concentration in three animal sets (P < 0.05). These animal sets contained Rambouillet, Polypay and crossbred sheep from multiple locations and management conditions. Strikingly, one flock had exceptionally high prevalence (>87%, including yearlings) and mean proviral concentration (>950 copies/µg), possibly due to needle sharing. The best estimate of proviral concentration by genotype, obtained from all 1310 OvLV-positive animals tested, showed insertion homozygotes had less than half the proviral concentration of other genotypes (P < 0.0001). Future work will test additional breeds, management conditions and viral subtypes, and identify functional properties of the haplotype this deletion variant tracks. To our knowledge, this is the first genetic variant consistently associated with host control of OvLV post-infection in multiple sheep flocks.


Subject(s)
Disease Resistance/genetics , Lentivirus Infections/veterinary , Sequence Deletion , Sheep Diseases/genetics , Animals , Genotype , Lentivirus Infections/genetics , Lentivirus Infections/immunology , Lentiviruses, Ovine-Caprine/immunology , Sheep , Sheep Diseases/immunology
6.
Proc Natl Acad Sci U S A ; 108(31): 12699-704, 2011 Aug 02.
Article in English | MEDLINE | ID: mdl-21742980

ABSTRACT

Small solutes affect protein and nucleic acid processes because of favorable or unfavorable chemical interactions of the solute with the biopolymer surface exposed or buried in the process. Large solutes also exclude volume and affect processes where biopolymer molecularity and/or shape changes. Here, we develop an analysis to separate and interpret or predict excluded volume and chemical effects of a flexible coil polymer on a process. We report a study of the concentration-dependent effects of the full series from monomeric to polymeric PEG on intramolecular hairpin and intermolecular duplex formation by 12-nucleotide DNA strands. We find that chemical effects of PEG on these processes increase in proportion to the product of the amount of DNA surface exposed on melting and the amount of PEG surface that is accessible to this DNA, and these effects are completely described by two interaction terms that quantify the interactions between this DNA surface and PEG end and interior groups. We find that excluded volume effects, once separated from these chemical effects, are quantitatively described by the analytical theory of Hermans, which predicts the excluded volume between a flexible polymer and a rigid molecule. From this analysis, we show that at constant concentration of PEG monomer, increasing PEG size increases the excluded volume effect but decreases the chemical interaction effect, because in a large PEG coil a smaller fraction of the monomers are accessible to the DNA. Volume exclusion by PEG has a much larger effect on intermolecular duplex formation than on intramolecular hairpin formation.


Subject(s)
Algorithms , DNA/chemistry , Models, Chemical , Nucleic Acid Conformation , Base Sequence , Dose-Response Relationship, Drug , Ethylene Glycol/chemistry , Ethylene Glycol/pharmacology , Ethylene Glycols/chemistry , Ethylene Glycols/pharmacology , Kinetics , Nucleic Acid Denaturation/drug effects , Polyethylene Glycols/chemistry , Polyethylene Glycols/pharmacology , Polymers/chemistry , Polymers/pharmacology , Potassium Chloride/chemistry , Potassium Chloride/pharmacology , Surface Properties , Thermodynamics , Water/chemistry
7.
Mod Pathol ; 24(1): 108-16, 2011 Jan.
Article in English | MEDLINE | ID: mdl-20852592

ABSTRACT

Splenic hamartoma is a rare tumor-like lesion composed of structurally disorganized red pulp elements. It has been hypothesized that two other splenic lesions, cord capillary hemangioma and myoid angioendothelioma, may fall within the spectrum of splenic hamartoma, simply representing morphological variants. In this study, we compared the vascular and stromal composition of cord capillary hemangioma and myoid angioendothelioma with those of classical hamartoma. In addition, we assessed the clonal vs polyclonal nature of the lesions in nine female cases by performing clonality analysis for X-chromosome inactivation at the human androgen receptor locus (HUMARA) on laser-assisted microdissected samples. In 15 of 17 cases, increased reticulin and/or collagen content was observed. The classical hamartoma cases showed a vasculature predominantly composed of CD8+ CD31+ CD34- splenic sinuses, whereas cases of cord capillary hemangioma and myoid angioendothelioma contained many CD8- CD31+ CD34+ cord capillaries, but very little CD8+ vasculature. All cases lacked expression of D2-40 and Epstein Barr virus-encoded RNA. All cases showed a proliferation index of ≤5% by Ki-67. Cases of classical hamartoma lacked significant perisinusoidal expression of collagen IV and low-affinity nerve growth factor receptor. Both markers were variably expressed in the other lesions. Increased CD163-positive histiocytes were found in four cases (three cord capillary hemangiomas and one myoid angioendothelioma). HUMARA analysis was informative in all nine tested cases, of which three cases showed a non-random X-chromosome inactivation pattern, indicating clonality. All three clonal cases were cord capillary hemangiomas. Our study has shown that in spite of considerable morphologic heterogeneity and overlapping features, classical hamartoma and cord capillary hemangioma and myoid angioendothelioma are different in terms of their vascular and stromal composition. Clonality analysis supports a true neoplastic origin for the cord capillary hemangioma. A larger study using additional immunohistochemical and molecular studies is necessary to further evaluate the biological significance of the current findings.


Subject(s)
Chromosomes, Human, X , Hamartoma/genetics , Hemangioma, Capillary/genetics , Splenic Neoplasms/genetics , X Chromosome Inactivation/genetics , Adolescent , Adult , Aged , Child , Clone Cells , Diagnosis, Differential , Female , Hamartoma/pathology , Hemangioendothelioma/genetics , Hemangioendothelioma/pathology , Hemangioma, Capillary/pathology , Humans , Male , Middle Aged , Splenic Neoplasms/pathology , Young Adult
8.
Parasite Immunol ; 33(1): 34-44, 2011 Jan.
Article in English | MEDLINE | ID: mdl-21155841

ABSTRACT

The spleen is a critical organ in defence against haemoparasitic diseases like babesiosis. Many in vitro and ex vivo studies have identified splenic cells working in concert to activate mechanisms required for successful resolution of infection. The techniques used in those studies, however, remove cells from the anatomical context in which cell interaction and trafficking take place. In this study, an immunohistological approach was used to monitor the splenic distribution of defined cells during the acute response of naïve calves to Babesia bovis infection. Splenomegaly was characterized by disproportionate hyperplasia of large versus small leucocytes and altered distribution of several cell types thought to be important in mounting an effective immune response. In particular, the results suggest that the initial crosstalk between NK cells and immature dendritic cells occurs within the marginal zone and that immature dendritic cells are first redirected to encounter pathogens as they enter the spleen and then mature as they process antigen and migrate to T-cell-rich areas. The results of this study are remarkably similar to those observed in a mouse model of malarial infection, suggesting these dynamic events may be central to the acute response of naïve animals to haemoparasitic infection.


Subject(s)
Babesia bovis/immunology , Babesia bovis/parasitology , Babesiosis/immunology , Babesiosis/parasitology , Cattle Diseases/immunology , Cattle Diseases/parasitology , Dendritic Cells/immunology , Dendritic Cells/parasitology , Immunophenotyping , Killer Cells, Natural/immunology , Killer Cells, Natural/parasitology , Spleen/immunology , Spleen/parasitology , Splenomegaly/immunology , Splenomegaly/parasitology , Acute Disease , Animals , Antigens, Protozoan/immunology , Babesia bovis/ultrastructure , Babesiosis/veterinary , Cattle , Cattle Diseases/physiopathology , Cell Count , Cell Proliferation , Immunohistochemistry , Immunophenotyping/veterinary , Magnetic Resonance Spectroscopy , Male , Organ Size , Spleen/physiopathology , Splenomegaly/veterinary
9.
J Exp Med ; 162(3): 1015-24, 1985 Sep 01.
Article in English | MEDLINE | ID: mdl-3875679

ABSTRACT

Ig and T beta gene rearrangements can be used as genetic markers of lineage and clonality in the study of B and T cell populations. We have addressed the issue of the respective B and T lineage specificity of these rearrangements by analyzing a panel of 63 lymphoid tumors representative of the various clinicopathologic categories of both B and T neoplasias. We report that approximately 10% of the cases tested displayed rearrangements of both Ig and T beta genes. Despite their dual genotypic pattern, these tumors retain a pure immunophenotype, i.e. they display either B or T cell lineage-restricted cell surface antigens. The implications of these findings for both normal and neoplastic lymphoid differentiation are discussed.


Subject(s)
Leukemia/immunology , Lymphoma/immunology , Receptors, Antigen, T-Cell/genetics , Receptors, Immunologic/genetics , Antibodies, Monoclonal/immunology , Antigens, Neoplasm/analysis , Antigens, Surface/analysis , B-Lymphocytes/immunology , DNA, Neoplasm/analysis , Genetic Markers , Genotype , Humans , Leukemia/genetics , Lymphoma/genetics , Sezary Syndrome/genetics , Sezary Syndrome/immunology , T-Lymphocytes/immunology
10.
J Exp Med ; 165(3): 848-64, 1987 Mar 01.
Article in English | MEDLINE | ID: mdl-2434600

ABSTRACT

Decay-accelerating factor (DAF) is a 70 kD membrane regulatory protein that prevents the activation of autologous complement on cell surfaces. Using immunohistochemical methods and a radioimmunometric assay based on mAbs to DAF, we found large amounts of membrane-associated DAF antigen on the epithelial surface of cornea, conjunctiva, oral and gastrointestinal mucosa, exocrine glands, renal tubules, ureter and bladder, cervical and uterine mucosa, and pleural, pericardial and synovial serosa. Additionally, we detected soluble DAF antigen in plasma, tears, saliva, and urine, as well as in synovial and cerebrospinal fluids. While plasma, tear, and saliva DAF are larger than erythrocyte (Ehu) membrane DAF by Western blot analysis, urine DAF is slightly smaller (67,000) in Mr. Unlike purified Ehu DAF, however, urine DAF is unable to incorporate into the membrane of red cells. Although its inhibitory activity on the complement enzyme C3-convertase is lower than that of Ehu DAF, it is comparable to that of serum C4 binding protein (C4bp). Biosynthetic studies using cultured foreskin epithelium and Hela cells disclosed DAF levels (approximately 2 X 10(5) molecules/cell) exceeding those on blood cells. In addition, these studies revealed the synthesis of two DAF species, one with apparent Mr corresponding to that of epithelial cell membrane DAF and the other to urine DAF, suggesting that the urine DAF variant arises from adjacent epithelium. The function of DAF in body fluids is unknown, but the observation that urine DAF has C4bp-(or factor H-)like activity shows that it could inhibit the fluid phase activation of the cascade.


Subject(s)
Body Fluids/analysis , Membrane Proteins/analysis , CD55 Antigens , Epithelium/analysis , Extracellular Space/analysis , HeLa Cells/analysis , Histocytochemistry , Humans , Immunoenzyme Techniques , Immunosorbent Techniques , Membrane Proteins/urine , Radioimmunoassay , Tissue Distribution
11.
J Exp Med ; 164(6): 2049-60, 1986 Dec 01.
Article in English | MEDLINE | ID: mdl-3491176

ABSTRACT

AIDS (acquired immune deficiency syndrome) and ARC (AIDS-related complex) are associated with a spectrum of lymphoproliferative disorders ranging from lymphadenopathy syndrome (LAS), an apparently benign polyclonal lymphoid hyperplasia, to B cell non-Hodgkin's lymphoma (B-NHL), i.e., malignant, presumably monoclonal B cell proliferations. To gain insight into the process of lymphomagenesis in AIDS and to investigate a possible pathogenetic relationship between LAS and NHL, we investigated the clonality of the B or T lymphoid populations by Ig or T beta gene rearrangement analysis, the presence of rearrangements involving the c-myc oncogene locus, and the presence of human immunodeficiency virus (HIV) sequences in both LAS and B-NHL biopsies. Our data indicate that multiple clonal B cell expansions are present in a significant percentage of LAS (approximately 20%) and B-NHL (60%) biopsies. c-myc rearrangements/translocations are detectable in 9 of our 10 NHLs, but not in any of the LAS cases. However, only one of the B cell clones, identified by Ig gene rearrangements carries a c-myc gene rearrangement, suggesting that only one clone carries the genetic abnormality associated with malignant B cell lymphoma. Furthermore, the frequency of detection of c-myc rearrangements in AIDS-associated NHLs of both Burkitt and non-Burkitt type suggest that the biological alterations present in AIDS favor the development of lymphomas carrying activated c-myc oncogenes. Finally, our data show that HIV DNA sequences are not detectable in LAS nor in NHL B cell clones, suggesting that HIV does not play a direct role in NHL development. Taken together, these observations suggest a model of multistep lymphomagenesis in AIDS in which LAS would represent a predisposing condition to NHL. Immunosuppression and EBV infection present in LAS can favor the expansion of B cell clones, which in turn may increase the probability of occurrence of c-myc rearrangements leading to malignant transformation.


Subject(s)
Acquired Immunodeficiency Syndrome/genetics , Antibodies, Monoclonal , B-Lymphocytes/immunology , Oncogenes , AIDS-Related Complex/genetics , AIDS-Related Complex/immunology , Acquired Immunodeficiency Syndrome/immunology , Genotype , Humans , Phenotype
12.
J Exp Med ; 162(6): 2156-62, 1985 Dec 01.
Article in English | MEDLINE | ID: mdl-3934321

ABSTRACT

Twelve cases of T gamma LPD (lymphoproliferative disorders of Fc gamma receptor-bearing T cells) involving an expansion of large granular lymphocyte/natural killer (LGL/NK) cells were investigated for the expression of LGL/NK-associated markers and for T beta gene rearrangement. All the cases selected were classified as T gamma LPD on the basis of morphology, function, and phenotype of the circulating cells. 10 to 12 cases displayed clonal rearrangements of the T beta locus and expression of the T3 antigen, whereas the 2 remaining cases displayed the germline configuration of the T beta gene and no expression of the T3 antigen. T8, Mol, B73.1, and N901 antigens were variably expressed among both T beta+T3+ and T beta-T3- T gamma LPD cases. We suggest that individual T gamma LPD cases represent the clonal expansion of cells frozen at different stages of differentiation/activation within an individual hematopoietic LGL/NK lineage.


Subject(s)
Killer Cells, Natural/metabolism , Lymphoproliferative Disorders/genetics , Receptors, Antigen, T-Cell/genetics , T-Lymphocytes/metabolism , Antigens, Differentiation, T-Lymphocyte , Antigens, Surface/genetics , Cytotoxicity, Immunologic , Humans , Killer Cells, Natural/immunology , Leukemia/genetics , Leukemia/immunology , Lymphocytosis/genetics , Lymphocytosis/immunology , Lymphoproliferative Disorders/classification , Lymphoproliferative Disorders/immunology , Nucleic Acid Hybridization , Phenotype , T-Lymphocytes/classification , T-Lymphocytes/immunology
13.
J Exp Med ; 183(5): 2385-90, 1996 May 01.
Article in English | MEDLINE | ID: mdl-8642350

ABSTRACT

Herpesviral DNA fragments isolated from AIDS-associated Kaposi's sarcoma (KS) tissue (KSHV-DNA) share homology with two lymphotropic oncogenic gamma-herpesviruses, Epstein-Barr virus and Herpesvirus saimiri, and are present in the lesions of more than 95% of HIV and non-HIV-associated forms of KS, AIDS-related body cavity-based lymphomas, and AIDS-related multicentric Castleman's disease. Here we show that BC-1, a KSHV-DNA-positive, body cavity-based lymphoma cell line, produces infective herpesviral particles carrying a linear 270-kb genome that specifically transmits KSHV-DNA to CD19+ B cells. Transmission of KSHV-DNA is dependent upon a biologically active, replicating virus, since it is blocked by UV irradiation and foscarnet, an inhibitor of viral DNA-polymerase. This study represents the first isolation and transmission of the human herpesvirus-8/KS-associated herpesvirus.


Subject(s)
Acquired Immunodeficiency Syndrome/complications , B-Lymphocytes/virology , Herpesviridae/classification , Herpesviridae/physiology , Sarcoma, Kaposi/virology , Blotting, Southern , Cell Line , DNA Probes , DNA, Viral/analysis , Fetal Blood , Genome, Viral , Herpesviridae/isolation & purification , Herpesvirus 2, Saimiriine/classification , Herpesvirus 4, Human/classification , Humans , Polymerase Chain Reaction , Sarcoma, Kaposi/etiology
14.
J Exp Med ; 165(6): 1703-12, 1987 Jun 01.
Article in English | MEDLINE | ID: mdl-3473183

ABSTRACT

Ig and T cell receptor rearrangements have been used as irreversible markers of lineage and clonality in the study of B- and T-lymphoid populations. We have addressed the issue of lymphoid lineage specificity of these rearrangements by analyzing a panel of 25 TdT- acute myelogenous leukemias, 13 TdT+ AMLs, and 4 TdT+ undifferentiated leukemias. We report that while gene rearrangements represent extremely rare events in classical TdT- AML (less than 8%), rearrangements of either the Ig or T beta locus or both were detectable in the majority of the TdT+ AMLs (greater than 60%), and rearrangements of both loci were detectable in all of the TdT+ undifferentiated leukemias. These data demonstrate a significant association between TdT expression and Ig or T beta gene rearrangements even outside the lymphoid lineage, further supporting a role for TdT in Ig and T cell receptor gene assembly. These data also indicate that a coordinated program of lymphoid gene expression involving TdT-CD7-expression and Ig/T beta rearrangements can be activated before myeloid commitment. Whether the activation of this program represents a normal, albeit rare, event in early myelopoiesis or a transformation-related event present only in leukemic cells remains to be determined.


Subject(s)
DNA Nucleotidylexotransferase/analysis , DNA Nucleotidyltransferases/analysis , Immunoglobulins/genetics , Leukemia, Myeloid, Acute/immunology , Receptors, Antigen, T-Cell/genetics , Recombination, Genetic , Cell Differentiation , Humans , Leukemia/classification , Leukemia/diagnosis , Leukemia, Myeloid, Acute/enzymology , Leukemia, Myeloid, Acute/genetics , Lymphoma/classification , Lymphoma/diagnosis
15.
Vet Pathol ; 47(3): 518-28, 2010 May.
Article in English | MEDLINE | ID: mdl-20382821

ABSTRACT

In situ detection of ovine progressive pneumonia virus (OPPV) and the phenotypic identification of the cells that harbor OPPV have not been described for the OPPV-affected tissues, which include lung, mammary gland, synovial membranes of the carpal joint, and choroid plexus of the brain. In this study, the authors first developed a single enzyme-based automated immunohistochemical (IHC) analysis for detection of OPPV capsid antigen (CA) on OPPV-affected tissues, using 2 anti-CAEV CA monoclonal antibodies, 5A1 and 10A1, and 2 enzyme-based IHC systems. Out of 10 naturally and persistently OPPV-infected ewes, OPPV CA was detected in intercellular regions of the carpal synovial membrane of 1 ewe, in cells resembling alveolar macrophages and pulmonary interstitial macrophages in lung tissue of 3 ewes, and in mammary alveolar cells of 1 ewe. Furthermore, dual enzyme-based automated IHC analyses revealed that OPPV CA was predominantly detected in CD172a- or CD163-positive alveolar macrophages of the lungs and mammary gland. That anti-inflammatory (CD163) and downregulatory (CD172a) types of alveolar macrophage harbor OPPV CA leads to the possibility that during persistent infection with OPPV, the host alveolar macrophage might serve to limit inflammation while OPPV persists undetected by the host adaptive immune response in the lung and mammary gland.


Subject(s)
Antigens, Viral/analysis , Lentivirus Infections/veterinary , Lentiviruses, Ovine-Caprine/immunology , Macrophages, Alveolar/virology , Sheep Diseases/virology , Animals , Antigens, CD/analysis , Antigens, Differentiation, Myelomonocytic/analysis , Capsid/immunology , Choroid Plexus/virology , Female , Lentivirus Infections/immunology , Lentivirus Infections/virology , Macrophages, Alveolar/immunology , Mammary Glands, Animal/virology , Receptors, Cell Surface/analysis , Sheep , Sheep Diseases/immunology , Synovial Membrane/virology
16.
J Virol ; 82(20): 10318-20, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18632863

ABSTRACT

Variation in the ovine prion protein amino acid sequence influences scrapie progression, with sheep homozygous for A(136)R(154)Q(171) considered susceptible. This study examined the association of survival time of scrapie-exposed ARQ sheep with variation elsewhere in the ovine prion gene. Four single nucleotide polymorphism alleles were associated with prolonged survival. One nonsynonymous allele (T112) was associated with an additional 687 days of survival for scrapie-exposed sheep compared to M112 sheep (odds ratio, 42.5; P = 0.00014). The only two sheep homozygous for T112 (TARQ) did not develop scrapie, suggesting that the allelic effect may be additive. These results provide evidence that TARQ sheep are genetically resistant to development of classical scrapie.


Subject(s)
Genetic Predisposition to Disease , Polymorphism, Single Nucleotide , Prions/genetics , Scrapie/genetics , Sheep Diseases/genetics , Amino Acid Sequence , Animals , Haplotypes , Humans , Prions/metabolism , Scrapie/mortality , Sheep/genetics , Sheep/metabolism , Sheep Diseases/mortality , Survival Rate
17.
J Cell Biol ; 147(6): 1275-86, 1999 Dec 13.
Article in English | MEDLINE | ID: mdl-10601340

ABSTRACT

We cloned and characterized a full-length cDNA of mouse actin cross-linking family 7 (mACF7) by sequential rapid amplification of cDNA ends-PCR. The completed mACF7 cDNA is 17 kb and codes for a 608-kD protein. The closest relative of mACF7 is the Drosophila protein Kakapo, which shares similar architecture with mACF7. mACF7 contains a putative actin-binding domain and a plakin-like domain that are highly homologous to dystonin (BPAG1-n) at its NH(2) terminus. However, unlike dystonin, mACF7 does not contain a coiled-coil rod domain; instead, the rod domain of mACF7 is made up of 23 dystrophin-like spectrin repeats. At its COOH terminus, mACF7 contains two putative EF-hand calcium-binding motifs and a segment homologous to the growth arrest-specific protein, Gas2. In this paper, we demonstrate that the NH(2)-terminal actin-binding domain of mACF7 is functional both in vivo and in vitro. More importantly, we found that the COOH-terminal domain of mACF7 interacts with and stabilizes microtubules. In transfected cells full-length mACF7 can associate not only with actin but also with microtubules. Hence, we suggest a modified name: MACF (microtubule actin cross-linking factor). The properties of MACF are consistent with the observation that mutations in kakapo cause disorganization of microtubules in epidermal muscle attachment cells and some sensory neurons.


Subject(s)
Actins/metabolism , Carrier Proteins , Cytoskeletal Proteins/chemistry , Cytoskeleton/metabolism , Drosophila Proteins , Dystrophin/chemistry , Microfilament Proteins/metabolism , Microtubules/metabolism , Nerve Tissue Proteins/chemistry , Actin Cytoskeleton/metabolism , Amino Acid Motifs , Amino Acid Sequence , Animals , COS Cells , Cloning, Molecular , Dystonin , Embryo, Mammalian/metabolism , Humans , Mice , Microfilament Proteins/chemistry , Microfilament Proteins/genetics , Molecular Sequence Data , Protein Binding , Protein Structure, Secondary , RNA, Messenger/analysis , RNA, Messenger/genetics , Recombinant Fusion Proteins/metabolism , Sequence Analysis, DNA , Sequence Homology, Amino Acid
18.
Science ; 250(4981): 682-6, 1990 Nov 02.
Article in English | MEDLINE | ID: mdl-2237417

ABSTRACT

The function of the c-myc gene and its role in tumorigenesis are poorly understood. In order to elucidate the role of c-myc oncogene activation in B cell malignancy, the phenotypic changes caused by the expression of c-myc oncogenes in human B lymphoblastoid cells immortalized by Epstein-Barr virus were analyzed. C-myc oncogenes caused the down-regulation of lymphocyte function-associated antigen-1 (LFA-1) adhesion molecules (alpha L/beta 2 integrin) and loss of homotypic B cell adhesion in vitro. Down-regulation of LFA-1 occurred by (i) posttranscriptional modulation of LFA-1 alpha L-chain RNA soon after acute c-myc induction, and (ii) transcriptional modulation in cells that chronically express c-myc oncogenes. Analogous reductions in LFA-1 expression were detectable in Burkitt lymphoma cells carrying activated c-myc oncogenes. Since LFA-1 is involved in B cell adhesion to cytotoxic T cells, natural killer cells, and vascular endothelium, these results imply functions for c-myc in normal B cell development and lymphomagenesis.


Subject(s)
B-Lymphocytes/immunology , Lymphocyte Function-Associated Antigen-1/analysis , Proto-Oncogene Proteins c-myc/genetics , Proto-Oncogenes , Cell Line , Cell Transformation, Neoplastic , Down-Regulation , Humans , Lymphocyte Function-Associated Antigen-1/genetics , Lymphocyte Function-Associated Antigen-1/physiology , Plasminogen Inactivators
19.
Science ; 243(4891): 660-3, 1989 Feb 03.
Article in English | MEDLINE | ID: mdl-2536954

ABSTRACT

The biological effects of ras oncogene activation in B cells were studied by using amphotropic retroviral vectors to introduce H- or N-ras oncogenes into human B lymphoblasts immortalized by Epstein-Barr virus. Expression of both H- and N-ras oncogenes led to malignant transformation of these cells, as shown by clonogenicity in semisolid media and tumorigenicity in immunodeficient mice. In addition, terminal differentiation into plasma cells was detectable as specific changes in morphology, immunoglobulin secretion, and cell surface antigen expression. This combined effect, promoting growth and differentiation in human lymphoblasts, represents a novel biological action of ras oncogenes and has implications for the pathogenesis of terminally differentiated B-lymphoid malignancies such as multiple myeloma.


Subject(s)
B-Lymphocytes/pathology , Cell Transformation, Neoplastic , Cell Transformation, Viral , Genes, ras , Herpesvirus 4, Human , Plasma Cells/pathology , Animals , B-Lymphocytes/metabolism , Cell Differentiation , DNA Replication , Flow Cytometry , Fluorescent Antibody Technique , Gene Expression Regulation , Humans , Mice , Mice, Nude , Neoplasm Transplantation , Neoplasms, Experimental/etiology , Phenotype
20.
Science ; 266(5192): 1865-9, 1994 Dec 16.
Article in English | MEDLINE | ID: mdl-7997879

ABSTRACT

Representational difference analysis was used to isolate unique sequences present in more than 90 percent of Kaposi's sarcoma (KS) tissues obtained from patients with acquired immunodeficiency syndrome (AIDS). These sequences were not present in tissue DNA from non-AIDS patients, but were present in 15 percent of non-KS tissue DNA samples from AIDS patients. The sequences are homologous to, but distinct from, capsid and tegument protein genes of the Gammaherpesvirinae, herpesvirus saimiri and Epstein-Barr virus. These KS-associated herpesvirus-like (KSHV) sequences appear to define a new human herpesvirus.


Subject(s)
Acquired Immunodeficiency Syndrome/complications , DNA, Viral/analysis , Herpesviridae/genetics , Sarcoma, Kaposi/virology , Amino Acid Sequence , Base Composition , Base Sequence , Blotting, Southern , Cloning, Molecular , DNA, Viral/chemistry , DNA, Viral/genetics , Female , Herpesvirus 2, Saimiriine/genetics , Herpesvirus 4, Human/genetics , Humans , Male , Molecular Sequence Data , Nucleic Acid Hybridization , Open Reading Frames , Polymerase Chain Reaction , Retrospective Studies , Sarcoma, Kaposi/etiology , Sequence Homology, Amino Acid
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