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1.
Protein Eng Des Sel ; 372024 Jan 29.
Article in English | MEDLINE | ID: mdl-39292622

ABSTRACT

Phosphotriesterases (PTEs) represent a class of enzymes capable of efficient neutralization of organophosphates (OPs), a dangerous class of neurotoxic chemicals. PTEs suffer from low catalytic activity, particularly at higher temperatures, due to low thermostability and low solubility. Supercharging, a protein engineering approach via selective mutation of surface residues to charged residues, has been successfully employed to generate proteins with increased solubility and thermostability by promoting charge-charge repulsion between proteins. We set out to overcome the challenges in improving PTE activity against OPs by employing a computational protein supercharging algorithm in Rosetta. Here, we discover two supercharged PTE variants, one negatively supercharged (with -14 net charge) and one positively supercharged (with +12 net charge) and characterize them for their thermodynamic stability and catalytic activity. We find that positively supercharged PTE possesses slight but significant losses in thermostability, which correlates to losses in catalytic efficiency at all temperatures, whereas negatively supercharged PTE possesses increased catalytic activity across 25°C-55°C while offering similar thermostability characteristic to the parent PTE. The impact of supercharging on catalytic efficiency will inform the design of shelf-stable PTE and criteria for enzyme engineering.


Subject(s)
Enzyme Stability , Paraoxon , Phosphoric Triester Hydrolases , Protein Engineering , Phosphoric Triester Hydrolases/chemistry , Phosphoric Triester Hydrolases/genetics , Phosphoric Triester Hydrolases/metabolism , Paraoxon/chemistry , Paraoxon/metabolism , Protein Engineering/methods , Models, Molecular , Thermodynamics , Temperature
2.
ChemistryOpen ; 13(7): e202300263, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38426687

ABSTRACT

Organophosphates (OPs) are a class of neurotoxic acetylcholinesterase inhibitors including widely used pesticides as well as nerve agents such as VX and VR. Current treatment of these toxins relies on reactivating acetylcholinesterase, which remains ineffective. Enzymatic scavengers are of interest for their ability to degrade OPs systemically before they reach their target. Here we describe a library of computationally designed variants of phosphotriesterase (PTE), an enzyme that is known to break down OPs. The mutations G208D, F104A, K77A, A80V, H254G, and I274N broadly improve catalytic efficiency of VX and VR hydrolysis without impacting the structure of the enzyme. The mutation I106 A improves catalysis of VR and L271E abolishes activity, likely due to disruptions of PTE's structure. This study elucidates the importance of these residues and contributes to the design of enzymatic OP scavengers with improved efficiency.


Subject(s)
Phosphoric Triester Hydrolases , Phosphoric Triester Hydrolases/metabolism , Phosphoric Triester Hydrolases/chemistry , Cholinesterase Inhibitors/chemistry , Cholinesterase Inhibitors/metabolism , Organothiophosphorus Compounds/chemistry , Organothiophosphorus Compounds/metabolism , Mutation , Hydrolysis , Models, Molecular
3.
Cancer Immunol Res ; 10(11): 1354-1369, 2022 11 02.
Article in English | MEDLINE | ID: mdl-36095236

ABSTRACT

Tumor-associated macrophages (TAM) are one of the most abundant cell types in many solid tumors and typically exert protumor effects. This has led to an interest in macrophage-depleting agents for cancer therapy, but approaches developed to date have had limited success in clinical trials. Here, we report the development of a strategy for TAM depletion in mouse solid tumor models using chimeric antigen receptor (CAR) T cells targeting the macrophage marker F4/80 (F4.CAR-T). F4.CAR-T cells effectively killed macrophages in vitro and in vivo without toxicity. When injected into mice bearing orthotopic lung tumors, F4.CAR-T cells infiltrated tumor lesions and delayed tumor growth comparably with PD-1 blockade, and significantly extended mouse survival. Antitumor effects were mediated by F4.CAR-T-produced IFNγ, which promoted upregulation of MHC molecules on cancer cells and tumor-infiltrating myeloid cells. Notably, F4.CAR-T promoted expansion of endogenous CD8 T cells specific for tumor-associated antigen and led to immune editing of highly antigenic tumor cell clones. Antitumor impact was also observed in mouse models of ovarian and pancreatic cancer. These studies provide proof of principle to support CAR T-cell targeting of TAMs as a means to enhance antitumor immunity.


Subject(s)
Receptors, Chimeric Antigen , T-Lymphocytes , Animals , Mice , Antigens, Neoplasm , Cell Line, Tumor , Disease Models, Animal , Immunotherapy, Adoptive , Macrophages/metabolism , Receptors, Chimeric Antigen/metabolism , Xenograft Model Antitumor Assays , Disease Progression
4.
Acta Crystallogr F Struct Biol Commun ; 74(Pt 9): 571-577, 2018 Sep 01.
Article in English | MEDLINE | ID: mdl-30198890

ABSTRACT

Cqm1 from Culex quinquefasciatus has been identified as the receptor for Lysinibacillus sphaericus binary toxin (BinAB). It is an amylomaltase that is presented on the epithelial membrane in the larval midgut through a glycosyl-phosphatidylinositol anchor. The active core of this protein (residues 23-560) was overexpressed in Escherichia coli, purified and successfully crystallized by the sitting-drop vapor-diffusion method using D-arabinose and CaCl2 as additives, as identified using high-throughput differential scanning fluorimetry analysis. X-ray diffraction data were collected to a resolution of 2.8 Šusing a laboratory X-ray source. The crystals had the symmetry of space group P212121, with unit-cell parameters a = 191.3, b = 205.3, c = 59.0 Šand with four monomers in the asymmetric unit. Structure refinement is in progress. This is the first structure report for a binary toxin receptor and for a member of the GH13_17 subfamily in the CAZy database.


Subject(s)
Culex/chemistry , Glycogen Debranching Enzyme System/chemistry , Insect Proteins/chemistry , Larva/chemistry , Receptors, Cell Surface/chemistry , Amino Acid Sequence , Animals , Bacterial Toxins/chemistry , Binding Sites , Cloning, Molecular , Crystallography, X-Ray , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Glycogen Debranching Enzyme System/genetics , Glycogen Debranching Enzyme System/metabolism , Insect Proteins/genetics , Insect Proteins/metabolism , Insecticides/chemistry , Ligands , Models, Molecular , Protein Binding , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Interaction Domains and Motifs , Protein Multimerization , Receptors, Cell Surface/genetics , Receptors, Cell Surface/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Alignment , Structural Homology, Protein
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