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1.
Platelets ; 27(4): 378-80, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26556301

ABSTRACT

High expression of the collagen receptor, α2ß1 integrin, on platelets of ITGA2 807T-allele carriers has been identified as a risk factor for thromboembolic conditions, and α2ß1 inhibitors are considered to be potential therapeutic agents. In 59 genotyped individuals, we measured α2 expression levels on platelets and analyzed platelet adhesion to collagen under flow conditions. A sulfonamide-type small-molecule inhibitor of α2ß1 integrin decreased average platelet adhesion in individuals with the C/T807T genotype but not in those harboring C807C. Thus, genotype can be used to select a human subpopulation that has the highest probability of showing a positive response to α2ß1 inhibitors.


Subject(s)
Blood Platelets/drug effects , Blood Platelets/metabolism , Integrin alpha2beta1/antagonists & inhibitors , Integrin alpha2beta1/genetics , Polymorphism, Single Nucleotide , Adult , Alleles , Amino Acid Chloromethyl Ketones/pharmacology , Animals , Collagen/metabolism , Female , Genotype , Humans , Integrin alpha2beta1/metabolism , Male , Mice , Middle Aged , Pharmacogenomic Variants , Protein Binding , Young Adult
2.
Nat Methods ; 9(7): 683-9, 2012 Jun 28.
Article in English | MEDLINE | ID: mdl-22743773

ABSTRACT

BioImageXD puts open-source computer science tools for three-dimensional visualization and analysis into the hands of all researchers, through a user-friendly graphical interface tuned to the needs of biologists. BioImageXD has no restrictive licenses or undisclosed algorithms and enables publication of precise, reproducible and modifiable workflows. It allows simple construction of processing pipelines and should enable biologists to perform challenging analyses of complex processes. We demonstrate its performance in a study of integrin clustering in response to selected inhibitors.


Subject(s)
Computational Biology/methods , High-Throughput Screening Assays/methods , Imaging, Three-Dimensional/methods , Software , Algorithms , Computational Biology/instrumentation , High-Throughput Screening Assays/instrumentation , Imaging, Three-Dimensional/instrumentation , User-Computer Interface
3.
J Biol Chem ; 287(53): 44694-702, 2012 Dec 28.
Article in English | MEDLINE | ID: mdl-23132859

ABSTRACT

The interaction between α2ß1 integrin (GPIa/IIa, VLA-2) and vascular collagen is one of the initiating events in thrombus formation. Here, we describe two structurally similar sulfonamide derivatives, BTT-3033 and BTT-3034, and show that, under static conditions, they have an almost identical effect on α2-expressing CHO cell adhesion to collagen I, but only BTT-3033 blocks platelet attachment under flow (90 dynes/cm(2)). Differential scanning fluorimetry showed that both molecules bind to the α2I domain of the recombinant α2 subunit. To further study integrin binding mechanism(s) of the two sulfonamides, we created an α2 Y285F mutant containing a substitution near the metal ion-dependent adhesion site motif in the α2I domain. The action of BTT-3033, unlike that of BTT-3034, was dependent on Tyr-285. In static conditions BTT-3034, but not BTT-3033, inhibited collagen binding by an α2 variant carrying a conformationally activating E318W mutation. Conversely, in under flow conditions (90 dynes/cm(2)) BTT-3033, but not BTT-3034, inhibited collagen binding by an α2 variant expressing E336A loss-of-function mutation. Thus, the binding sites for BTT-3033 and BTT-3034 are differentially available in distinct integrin conformations. Therefore, these sulfonamides can be used to study the biological role of different functional stages of α2ß1. Furthermore, only the inhibitor that recognized the non-activated conformation of α2ß1 integrin under shear stress conditions effectively blocked platelet adhesion, suggesting that the initial interaction between integrin and collagen takes place prior to receptor activation.


Subject(s)
Collagen Type I/metabolism , Integrin alpha2beta1/antagonists & inhibitors , Integrin alpha2beta1/metabolism , Platelet Membrane Glycoproteins/metabolism , Sulfonamides/metabolism , Animals , Blood Platelets/chemistry , Blood Platelets/cytology , Blood Platelets/metabolism , Cell Adhesion/drug effects , Cell Line , Humans , Integrin alpha2beta1/genetics , Mice , Mice, Inbred C57BL , Molecular Structure , Platelet Membrane Glycoproteins/genetics , Protein Binding/drug effects , Stress, Mechanical , Sulfonamides/pharmacology
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