Search details
1.
EMBL's European Bioinformatics Institute (EMBL-EBI) in 2023.
Nucleic Acids Res
; 52(D1): D10-D17, 2024 Jan 05.
Article
in English
| MEDLINE | ID: mdl-38015445
2.
The ProteomeXchange consortium at 10 years: 2023 update.
Nucleic Acids Res
; 51(D1): D1539-D1548, 2023 01 06.
Article
in English
| MEDLINE | ID: mdl-36370099
3.
Open-source large language models in action: A bioinformatics chatbot for PRIDE database.
Proteomics
; : e2400005, 2024 Mar 31.
Article
in English
| MEDLINE | ID: mdl-38556628
4.
Meta-Analysis of Rice Phosphoproteomics Data to Understand Variation in Cell Signaling Across the Rice Pan-Genome.
J Proteome Res
; 2024 May 29.
Article
in English
| MEDLINE | ID: mdl-38810119
5.
Universal Spectrum Identifier for mass spectra.
Nat Methods
; 18(7): 768-770, 2021 07.
Article
in English
| MEDLINE | ID: mdl-34183830
6.
The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences.
Nucleic Acids Res
; 50(D1): D543-D552, 2022 01 07.
Article
in English
| MEDLINE | ID: mdl-34723319
7.
Integrative analysis of genomic variants reveals new associations of candidate haploinsufficient genes with congenital heart disease.
PLoS Genet
; 17(7): e1009679, 2021 07.
Article
in English
| MEDLINE | ID: mdl-34324492
8.
Correction: Integrative analysis of genomic variants reveals new associations of candidate haploinsufficient genes with congenital heart disease.
PLoS Genet
; 17(9): e1009809, 2021 Sep.
Article
in English
| MEDLINE | ID: mdl-34547032
9.
Tissue-based absolute quantification using large-scale TMT and LFQ experiments.
Proteomics
; 23(20): e2300188, 2023 Oct.
Article
in English
| MEDLINE | ID: mdl-37488995
10.
LFQ-Based Peptide and Protein Intensity Differential Expression Analysis.
J Proteome Res
; 22(6): 2114-2123, 2023 06 02.
Article
in English
| MEDLINE | ID: mdl-37220883
11.
ProteomicsML: An Online Platform for Community-Curated Data sets and Tutorials for Machine Learning in Proteomics.
J Proteome Res
; 22(2): 632-636, 2023 02 03.
Article
in English
| MEDLINE | ID: mdl-36693629
12.
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work.
J Proteome Res
; 22(2): 287-301, 2023 02 03.
Article
in English
| MEDLINE | ID: mdl-36626722
13.
MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets.
Nat Methods
; 17(10): 981-984, 2020 10.
Article
in English
| MEDLINE | ID: mdl-32929271
14.
Generation of ENSEMBL-based proteogenomics databases boosts the identification of non-canonical peptides.
Bioinformatics
; 38(5): 1470-1472, 2022 02 07.
Article
in English
| MEDLINE | ID: mdl-34904638
15.
A Comprehensive Evaluation of Consensus Spectrum Generation Methods in Proteomics.
J Proteome Res
; 21(6): 1566-1574, 2022 06 03.
Article
in English
| MEDLINE | ID: mdl-35549218
16.
Proteomics Standards Initiative's ProForma 2.0: Unifying the Encoding of Proteoforms and Peptidoforms.
J Proteome Res
; 21(4): 1189-1195, 2022 04 01.
Article
in English
| MEDLINE | ID: mdl-35290070
17.
OpenMS 3 enables reproducible analysis of large-scale mass spectrometry data.
Nat Methods
; 21(3): 365-367, 2024 Mar.
Article
in English
| MEDLINE | ID: mdl-38366242
18.
Proteomic repository data submission, dissemination, and reuse: key messages.
Expert Rev Proteomics
; 19(7-12): 297-310, 2022.
Article
in English
| MEDLINE | ID: mdl-36529941
19.
The omics discovery REST interface.
Nucleic Acids Res
; 48(W1): W380-W384, 2020 07 02.
Article
in English
| MEDLINE | ID: mdl-32374843
20.
The ProteomeXchange consortium in 2020: enabling 'big data' approaches in proteomics.
Nucleic Acids Res
; 48(D1): D1145-D1152, 2020 01 08.
Article
in English
| MEDLINE | ID: mdl-31686107