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1.
J Appl Microbiol ; 124(2): 431-443, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29130635

ABSTRACT

AIMS: The aim of this study was to analyse arsenic (As) transformation and biosorption by indigenous As-resistant bacteria both in planktonic and biofilm modes of growth. METHODS AND RESULTS: As-resistant bacteria were isolated from industrial waste water and strain PT2, and identified as Exiguobacterium profundum through 16S rRNA gene sequencing was selected for further study. As transformation and biosorption by E. profundumPT2 was determined by HPLC-ICP-MS analysis. Planktonic cultures reduced 3·73 mmol l-1 As5+ into As3+ from artificial waste water effluent after 48-h incubation. In case of biosorption, planktonic cultures and biofilms exhibited 25·2 and 29·4 mg g-1 biomass biosorption, respectively. As biosorption kinetics followed Freundlich isotherm and pseudo second-order model. Biofilm formation peaked after 3 days of incubation, and in the presence of As stress, biofilm formation was significantly affected in contrast to control (P < 0·05). Homogeneous nature of mature biofilms with an increased demand of nutrients was revealed by minimum roughness and maximum surface to biovolume ratio measured through CLSM analysis. CONCLUSION: Indigenous As-resistant E. profundumPT2 was found capable of As transformation and biosorption both in the form of planktonic cultures and biofilms. SIGNIFICANCE AND IMPACT OF THE STUDY: Indigenous biofilm forming E. profundum PT2 revealing As biosorption and biotransformation potential is presented an eco-friendly and cost-effective source for As remediation that can be implemented for waste water treatment.


Subject(s)
Arsenic/metabolism , Bacillaceae/metabolism , Biofilms , Water Pollutants, Chemical/metabolism , Adsorption , Bacillaceae/chemistry , Bacillaceae/genetics , Bacillaceae/isolation & purification , Biomass , Biotransformation , Industrial Waste/analysis , Kinetics , RNA, Ribosomal, 16S/metabolism , Wastewater/analysis
2.
Epidemiol Infect ; 145(2): 289-298, 2017 01.
Article in English | MEDLINE | ID: mdl-27780484

ABSTRACT

Since April 2015, whole genome sequencing (WGS) has been the routine test for Salmonella identification, surveillance and outbreak investigation at the national reference laboratory in England and Wales. In May 2015, an outbreak of Salmonella Enteritidis cases was detected using WGS data and investigated. UK cases were interviewed to obtain a food history and links between suppliers were mapped to produce a food chain network for chicken eggs. The association between the food chain network and the phylogeny was explored using a network comparison approach. Food and environmental samples were taken from premises linked to cases and tested for Salmonella. Within the outbreak single nucleotide polymorphism defined cluster, 136 cases were identified in the UK and 18 in Spain. One isolate from a food containing chicken eggs was within the outbreak cluster. There was a significant association between the chicken egg food chain of UK cases and phylogeny of outbreak isolates. This is the first published Salmonella outbreak to be prospectively detected using WGS. This outbreak in the UK was linked with contemporaneous cases in Spain by WGS. We conclude that UK and Spanish cases were exposed to a common source of Salmonella-contaminated chicken eggs.


Subject(s)
Disease Outbreaks , Foodborne Diseases/epidemiology , Genome, Bacterial , High-Throughput Nucleotide Sequencing , Salmonella Infections/epidemiology , Salmonella enteritidis/classification , Salmonella enteritidis/genetics , Adolescent , Adult , Aged , Aged, 80 and over , Animals , Chickens , Child , Child, Preschool , Cluster Analysis , Eggs/microbiology , Female , Foodborne Diseases/microbiology , Humans , Infant , Male , Meat/microbiology , Middle Aged , Molecular Epidemiology , Polymorphism, Single Nucleotide , Salmonella Infections/microbiology , Salmonella enteritidis/isolation & purification , Spain/epidemiology , Surveys and Questionnaires , United Kingdom/epidemiology , Young Adult
3.
J Appl Microbiol ; 123(3): 748-758, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28708308

ABSTRACT

AIMS: The aim of the study was to explore irrigation water polluted with industrial waste and corresponding cropland to screen bacteria for As detoxification and plant growth promotion. METHODS AND RESULTS: Plant growth-promoting (PGP) As-resistant cropland bacteria were isolated from contaminated irrigation water and corresponding agricultural soil. Phylogenetic analysis revealed that the isolates belonged to two distinct bacterial lineages; Firmicutes and γ-Proteobacteria. Maximum As(V) resistance was exhibited by Klebsiella pneumoniae T22 and Klebsiella oxytoca N53 (550 mmol l-1 ), whereas maximum resistance against As(III) was exhibited by K. oxytoca N53 (200 mmol l-1 ). Maximum As(V) reduction was shown by K. pneumoniae T22 (6·7 mmol l-1 ), whereas maximum As(III) oxidation was exhibited by Bacillus subtilis T23 (4·8 mmol l-1 ). As resistance genes arsB and ACR3 were detected in many of the isolates through polymerase chain reaction. Many of these isolates exhibited PGP traits such as hydrogen cyanide and auxin production as well as phosphate solubilization. The bacterial strains were able to enhance Triticum aestivum growth both in the absence and presence of As, and statistically significant increase in shoot and root lengths was observed especially in case of Acinetobacter lwoffii T24 and Citrobacter freundii N52-treated plants. CONCLUSIONS: Cropland bacteria have the ability to support plant growth. Bacteria of croplands irrigated with industrially polluted water develop resistance against toxicants. These bacteria are helpful for the plant growth in such contaminated lands. SIGNIFICANCE AND IMPACT OF THE STUDY: The bacteria capable of both As detoxification and plant growth promotion, such as A. lwoffii T24 and C. freundii N52, are ideal for remediation and reclamation of polluted lands for agriculture purposes.


Subject(s)
Arsenic/metabolism , Firmicutes/metabolism , Fresh Water/microbiology , Gammaproteobacteria/metabolism , Soil Pollutants/metabolism , Agricultural Irrigation , Crops, Agricultural/growth & development , Crops, Agricultural/metabolism , Crops, Agricultural/microbiology , Firmicutes/classification , Firmicutes/genetics , Firmicutes/isolation & purification , Gammaproteobacteria/classification , Gammaproteobacteria/genetics , Gammaproteobacteria/isolation & purification , Indoleacetic Acids/metabolism , Phylogeny
4.
Euro Surveill ; 17(37)2012 Sep 13.
Article in English | MEDLINE | ID: mdl-22995431

ABSTRACT

Twenty-one confirmed cases of Legionnaires' disease (Legionella pneumophila serogroup 1) were identified in the Stoke-on-Trent area of England with onsets since 2 July 2012. Sequence-based typing results are available for nine cases; all are a unique type (ST1268). Initial interviews highlighted a number of possible environmental sources. Inspection of premises of interest revealed an operating spa pool on display, from which the outbreak strain was identified. All cases had visited the retail premise with this spa pool.


Subject(s)
Disease Outbreaks , Legionella pneumophila/isolation & purification , Legionnaires' Disease/diagnosis , Legionnaires' Disease/epidemiology , Swimming Pools , Aged , Female , Genotype , Humans , Legionella pneumophila/genetics , Legionnaires' Disease/microbiology , Legionnaires' Disease/prevention & control , Male , Middle Aged , Polymerase Chain Reaction , Risk Factors , Sequence Analysis, DNA , Surveys and Questionnaires , United Kingdom/epidemiology , Water Microbiology
5.
Public Health ; 124(6): 326-31, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20483439

ABSTRACT

OBJECTIVES: To describe the multidisciplinary investigation and management of a rapidly increasing number of cases of Legionnaires' disease in the North Shropshire area, UK during August 2006. STUDY DESIGN: Epidemiological and environmental investigation of a cluster of cases of Legionnaires' disease. METHODS: Outbreak investigation included: agreeing case definitions; case finding; epidemiological survey; identification and environmental investigation of potential sources; microbiological analysis of clinical and environmental samples; mapping the location of potential sources; and the movement and residence of cases. RESULTS: Three cases of Legionnaires' disease were admitted to a local hospital between 30 and 31 August 2006. Two of these cases were Shropshire residents, with the third living in Wales. A fourth case was also identified which, it was thought, may have been linked to this cluster as the patient had a history of travel to the same area as the two Shropshire residents. Over the next few weeks, three more cases were identified, two of whom were admitted to hospital. Subsequent detailed environmental, epidemiological and microbiological investigation did not support the hypothesis that any of these cases could be linked to a common source. CONCLUSIONS: The results of this investigation strongly suggest that a single source was not responsible for the cluster, and it was concluded that this incident was a pseudo-outbreak. This investigation serves as a reminder that clusters can and do occur, and that an apparent outbreak may be a collection of sporadic cases distinguishable only by rigorous epidemiological, environmental and microbiological investigation.


Subject(s)
Community-Acquired Infections/epidemiology , Legionnaires' Disease/epidemiology , Public Health/methods , Adult , Aged , Cluster Analysis , Community-Acquired Infections/microbiology , Disease Outbreaks , Humans , Legionella pneumophila/isolation & purification , Legionnaires' Disease/microbiology , Male , Middle Aged , Travel , United Kingdom/epidemiology
7.
BMJ Case Rep ; 20102010 Sep 07.
Article in English | MEDLINE | ID: mdl-22778192

ABSTRACT

Diaphragmatic injuries are quite uncommon and often result from either blunt or penetrating trauma. Diaphragmatic ruptures are usually associated with abdominal trauma; however, it can occur in isolation. Acute traumatic rupture of the diaphragm may go unnoticed and there is often a delay between the injury and the diagnosis. Patients present with non-specific symptoms and may complain of chest pain, abdominal pain, dyspnoea, tachypnoea and cough, heartburn and symptoms of gastro-oesophageal reflux. Respiratory distress and faeco-pneumothorax have been reported. We present an interesting case of traumatic diaphragmatic hernia presenting 5 years after a road traffic accident as acute abdomen and massive haematemesis due to strangulated gangrenous gastric hernia.


Subject(s)
Hematemesis/diagnosis , Hernia, Diaphragmatic, Traumatic/complications , Hernia/etiology , Stomach Diseases/etiology , Wounds, Nonpenetrating/diagnosis , Abdominal Pain/diagnosis , Abdominal Pain/etiology , Adolescent , Delayed Diagnosis , Follow-Up Studies , Gangrene , Hematemesis/etiology , Hernia/diagnostic imaging , Hernia, Diaphragmatic, Traumatic/diagnosis , Humans , Laparotomy/methods , Male , Risk Assessment , Stomach Diseases/diagnostic imaging , Stomach Diseases/surgery , Time Factors , Tomography, X-Ray Computed/methods , Treatment Outcome , Wounds, Nonpenetrating/complications
8.
Commun Dis Public Health ; 7(4): 315-8, 2004 Dec.
Article in English | MEDLINE | ID: mdl-15779797

ABSTRACT

The West Midlands Regional HIV Surveillance Project was set up in 1991 in response to a need for enhanced surveillance of HIV at a local level for service planning. The system showed that accurate and timely data could be collected whilst ensuring patient confidentiality. We present some of the data obtained from the system. HIV diagnoses continue to increase year on year, with certain population subgroups, including men who have sex with men and black Africans, disproportionately affected.


Subject(s)
HIV Infections/epidemiology , Population Surveillance/methods , Adolescent , Adult , Aged , Female , HIV Infections/ethnology , HIV Infections/prevention & control , HIV Infections/transmission , HIV Seroprevalence , Homosexuality, Male/statistics & numerical data , Humans , Male , Middle Aged , United Kingdom/epidemiology
9.
Commun Dis Public Health ; 4(3): 178-82, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11732356

ABSTRACT

This study assessed whether NHS Direct could be a useful source of surveillance data for communicable diseases, using influenza as a pilot condition. Data on the weekly total number of calls and the number from people reporting influenza-like symptoms to three pilot NHS Direct sites were collected between November 1999 and March 2000. NHS Direct data were compared with routinely available influenza surveillance data. The NHS Direct call rate peaked at 331 per 100,000 population in week 52 of 1999. The percentage of calls for 'influenza-like illness' (one site) peaked at 15% during week 51. Information about weekly call numbers to NHS Direct could be produced in a timely way. It was not clear whether the observed peak in calls reflected a true increase in influenza or whether it was the result of an increase in calls over the Christmas/Millennium holiday period due to more difficulty in accessing other services. The ability to assess the proportion of calls made directly by, or on behalf of, each age group will be of vital importance in interpreting seasonal respiratory disease.


Subject(s)
Health Planning/methods , Hotlines , Influenza, Human/epidemiology , Population Surveillance/methods , State Medicine , Disease Outbreaks , Health Status Indicators , Hotlines/statistics & numerical data , Humans , Pilot Projects , Seasons , Time Factors , United Kingdom/epidemiology
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