Search details
1.
Universal Spectrum Identifier for mass spectra.
Nat Methods
; 18(7): 768-770, 2021 07.
Article
in English
| MEDLINE | ID: mdl-34183830
2.
Unipept Desktop 2.0: Construction of Targeted Reference Protein Databases for Metaproteogenomics Analyses.
J Proteome Res
; 22(8): 2620-2628, 2023 08 04.
Article
in English
| MEDLINE | ID: mdl-37459443
3.
Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work.
J Proteome Res
; 22(2): 287-301, 2023 02 03.
Article
in English
| MEDLINE | ID: mdl-36626722
4.
The nutritional composition and cell size of microbial biomass for food applications are defined by the growth conditions.
Microb Cell Fact
; 22(1): 254, 2023 Dec 11.
Article
in English
| MEDLINE | ID: mdl-38072930
5.
Blood-borne extracellular vesicles of bacteria and intestinal cells in patients with psychotic disorders.
Nord J Psychiatry
; 77(7): 686-695, 2023 Oct.
Article
in English
| MEDLINE | ID: mdl-37354486
6.
Pout2Prot: An Efficient Tool to Create Protein (Sub)groups from Percolator Output Files.
J Proteome Res
; 21(4): 1175-1180, 2022 04 01.
Article
in English
| MEDLINE | ID: mdl-35143215
7.
Sensitive and Specific Spectral Library Searching with CompOmics Spectral Library Searching Tool and Percolator.
J Proteome Res
; 21(5): 1365-1370, 2022 05 06.
Article
in English
| MEDLINE | ID: mdl-35446579
8.
Proteomics Standards Initiative's ProForma 2.0: Unifying the Encoding of Proteoforms and Peptidoforms.
J Proteome Res
; 21(4): 1189-1195, 2022 04 01.
Article
in English
| MEDLINE | ID: mdl-35290070
9.
Unipept Desktop: A Faster, More Powerful Metaproteomics Results Analysis Tool.
J Proteome Res
; 20(4): 2005-2009, 2021 04 02.
Article
in English
| MEDLINE | ID: mdl-33401902
10.
MegaGO: A Fast Yet Powerful Approach to Assess Functional Gene Ontology Similarity across Meta-Omics Data Sets.
J Proteome Res
; 20(4): 2083-2088, 2021 04 02.
Article
in English
| MEDLINE | ID: mdl-33661648
11.
Unipept CLI 2.0: adding support for visualizations and functional annotations.
Bioinformatics
; 36(14): 4220-4221, 2020 08 15.
Article
in English
| MEDLINE | ID: mdl-32492134
12.
The European Bioinformatics Community for Mass Spectrometry (EuBIC-MS): an open community for bioinformatics training and research.
Rapid Commun Mass Spectrom
; : e9087, 2021 Apr 16.
Article
in English
| MEDLINE | ID: mdl-33861485
13.
The Age of Data-Driven Proteomics: How Machine Learning Enables Novel Workflows.
Proteomics
; 20(21-22): e1900351, 2020 11.
Article
in English
| MEDLINE | ID: mdl-32267083
14.
Connecting MetaProteomeAnalyzer and PeptideShaker to Unipept for Seamless End-to-End Metaproteomics Data Analysis.
J Proteome Res
; 19(8): 3562-3566, 2020 08 07.
Article
in English
| MEDLINE | ID: mdl-32431147
15.
Proteomics Standards Initiative Extended FASTA Format.
J Proteome Res
; 18(6): 2686-2692, 2019 06 07.
Article
in English
| MEDLINE | ID: mdl-31081335
16.
Challenges and promise at the interface of metaproteomics and genomics: an overview of recent progress in metaproteogenomic data analysis.
Expert Rev Proteomics
; 16(5): 375-390, 2019 05.
Article
in English
| MEDLINE | ID: mdl-31002542
17.
Enzymatic machinery of wood-inhabiting fungi that degrade temperate tree species.
ISME J
; 18(1)2024 Jan 08.
Article
in English
| MEDLINE | ID: mdl-38519103
18.
lesSDRF is more: maximizing the value of proteomics data through streamlined metadata annotation.
Nat Commun
; 14(1): 6743, 2023 10 24.
Article
in English
| MEDLINE | ID: mdl-37875519
19.
Research culture: science from bench to society.
Biol Open
; 10(8)2021 08 15.
Article
in English
| MEDLINE | ID: mdl-34378778
20.
The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes.
Microbiome
; 9(1): 243, 2021 12 20.
Article
in English
| MEDLINE | ID: mdl-34930457