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1.
J Environ Manage ; 344: 118509, 2023 Oct 15.
Article in English | MEDLINE | ID: mdl-37413727

ABSTRACT

The remediation of volatile chlorinated hydrocarbons in the quasi-vadose zone has become a significant challenge. We applied an integrated approach to assess the biodegradability of trichloroethylene to identify the biotransformation mechanism. The formation of the functional zone biochemical layer was assessed by analyzing the distribution of landfill gas, physical and chemical properties of cover soil, spatial-temporal variations of micro-ecology, biodegradability of landfill cover soil and distributional difference metabolic pathway. Real-time online monitoring showed that trichloroethylene continuously undergoes anaerobic dichlorination and simultaneous aerobic/anaerobic conversion-aerobic co-metabolic degradation on the vertical gradient of the landfill cover system and reduction in trans-1,2-dichloroethylene in the anoxic zone but not 1,1-dichloroethylene. PCR and diversity sequencing revealed the abundance and spatial distribution of known dichlorination-related genes within the landfill cover, with 6.61 ± 0.25 × 104-6.78 ± 0.09 × 106 and 1.17 ± 0.78 × 103-7.82 ± 0.07 × 105 copies per g/soil of pmoA and tceA, respectively. In addition, dominant bacteria and diversity were significantly linked with physicochemical factors, and Mesorhizobium, Pseudoxanthomonas and Gemmatimonas were responsible for biodegradation in the aerobic, anoxic and anaerobic zones. Metagenome sequencing identified 6 degradation pathways of trichloroethylene that may occur in the landfill cover; the main pathway was incomplete dechlorination accompanied by cometabolic degradation. These results indicate that the anoxic zone is important for trichloroethylene degradation.


Subject(s)
Trichloroethylene , Trichloroethylene/chemistry , Multiomics , Biodegradation, Environmental , Waste Disposal Facilities , Bacteria/genetics , Bacteria/metabolism , Soil , Polymerase Chain Reaction , Technology
2.
Environ Monit Assess ; 195(8): 970, 2023 Jul 19.
Article in English | MEDLINE | ID: mdl-37466699

ABSTRACT

River sediment is vital in containing water pollution and strengthening water remediation. This paper has conducted a study on the microecological health assessment of the sediment and water body of Guixi River in Dianjiang, Chongqing, China, using metagenomics sequencing and microbial biological integrity index (M-IBI) technology. The analysis of physical and chemical characteristics shows that the concentration of TN varies from 2.62 to 9.76 mg/L in each sampling section, and the eutrophication of the water body is relatively severe. The proportion of Cyanobacteria in the sampling section at the sink entrance is higher than that of other sites, where there are outbreaks of water blooms and potential hazards to human health. The dominant functions of each site include carbon metabolism, TCA cycle, and pyruvate metabolism. In addition, the main virulence factors and antibiotic resistance genes in sediment are Type IV pili (VF0082), LOS (CVF494), MymA operon (CVF649), and macrolide resistance genes macB, tetracyclic tetA (58), and novA. Correlation analysis of environmental factors and microorganisms was also performed, and it was discovered that Thiothrix and Acidovorax had obvious gene expression in the nitrogen metabolism pathway, and the Guixi River Basin had a self-purification capacity. Finally, based on the microecological composition of sediment and physical and chemical characteristics of the water body, the health assessment was carried out, indicating that the main pollution area was Dianjiang Middle School and the watershed near the sewage treatment plant. The findings should theoretically support an in-depth assessment of the water environment's microecological health.


Subject(s)
Environmental Monitoring , Metagenomics , Rivers , Water Pollutants, Chemical , China , Water Pollutants, Chemical/analysis , Drug Resistance, Bacterial , Genes, Bacterial , Humans
3.
Microb Ecol ; 84(1): 44-58, 2022 Jul.
Article in English | MEDLINE | ID: mdl-34398256

ABSTRACT

Nitrogen (N) shortage poses a great challenge to the implementation of in situ bioremediation practices in mining-contaminated sites. Diazotrophs can fix atmospheric N2 into a bioavailable form to plants and microorganisms inhabiting adverse habitats. Increasing numbers of studies mainly focused on the diazotrophic communities in the agroecosystems, while those communities in mining areas are still not well understood. This study compared the variations of diazotrophic communities in composition and interactions in the mining areas with different extents of arsenic (As) and antimony (Sb) contamination. As and Sb co-contamination increased alpha diversities and the abundance of nifH encoding the dinitrogenase reductase, while inhibited the diazotrophic interactions and substantially changed the composition of communities. Based on the multiple lines of evidence (e.g., the enrichment analysis of diazotrophs, microbe-microbe network, and random forest regression), six diazotrophs (e.g., Sinorhizobium, Dechloromonas, Trichormus, Herbaspirillum, Desmonostoc, and Klebsiella) were identified as keystone taxa. Environment-microbe network and random forest prediction demonstrated that these keystone taxa were highly correlated with the As and Sb contamination fractions. All these results imply that the above-mentioned diazotrophs may be resistant to metal(loid)s.


Subject(s)
Arsenic , Microbiota , Soil Pollutants , Antimony/analysis , Arsenic/analysis , Environmental Monitoring , Soil Pollutants/analysis
4.
Environ Res ; 214(Pt 1): 113834, 2022 11.
Article in English | MEDLINE | ID: mdl-35810810

ABSTRACT

One of the biggest challenges of applying heterotrophic nitrification-aerobic denitrification (HN-AD) bacteria to treat high salt organic wastewater lies in the inhibitory effect exerted by salinity. To study the inhibition effect and underlying mechanism induced by different ion types and ion composition, the individual and combined effects of NaCl, KCl and Na2SO4 on HN-AD bacteria Acinetobacter sp. TAC-1 were systematically investigated by batch experiments. Results indicated that the ammonia nitrogen removal yield and TAC-1 activity decreased with increased salt concentration. NaCl, KCl and Na2SO4 exerted different degrees of inhibition on TAC-1, with half concentration inhibition constant values of 0.205, 0.238 and 0.110 M, respectively. A synergistic effect on TAC-1 was found with the combinations of NaCl + KCl, NaCl + Na2SO4 and NaCl + KCl + Na2SO4. The whole RNA resequencing suggested that transcripts of denitrification genes (nirB and nasA) were significantly downregulated with increased Na2SO4 concentration. Simultaneously, Na2SO4 stress disrupted cell respiration, DNA replication, transcription, translation, and induced oxidative stress. Finally, we proposed a conceptual model to summarize the inhibition mechanisms and possible response strategies of TAC-1 bacteria under Na2SO4 stress.


Subject(s)
Denitrification , Nitrification , Aerobiosis , Bacteria , Nitrites , Nitrogen , Salinity , Sodium Chloride , Wastewater
5.
Phytopathology ; 110(4): 795-804, 2020 Apr.
Article in English | MEDLINE | ID: mdl-31935337

ABSTRACT

Experiments were conducted to evaluate potential functional and mechanistic differences in the suppression of Sclerotinia sclerotiorum and S. minor and root-knot nematodes in muck soils by anaerobic soil disinfestation (ASD) using different carbon source amendments. Volatile compounds produced during ASD in muck soil amended with molasses, wheat bran, or mustard greens at 20.2 Mg/ha or a 2% ethanol solution significantly reduced the mycelial growth and number of sclerotia produced by both Sclerotinia spp. compared with the anaerobic control. In amended soils, acetic and butyric acids were detected in concentrations that reduced the viability of sclerotia of both pathogens. Higher concentrations of carbon dioxide were observed in ASD-treated soils, regardless of the amendment, than in the nonamended anaerobic control. Only amendment with wheat bran did not increase the production of methane gas during ASD compared with the controls. Meloidogyne hapla survival was completely suppressed in soils treated with ASD regardless of carbon source. Field trials were conducted in Ohio muck soil to assess survival of sclerotia of both Sclerotinia spp. The viability of sclerotia of both Sclerotinia spp. was significantly reduced in soil subjected to ASD amended with wheat bran (20.2 Mg/ha), molasses (10.1 Mg/ha), or wheat bran (20.2 Mg/ha) plus molasses (10.1 Mg/ha) compared with the controls. A consistent negative correlation between soil reduction and viability of sclerotia of both pathogens was observed. Wheat bran and molasses are both widely available amendments that can be used as ASD carbon sources for the management of soilborne pathogens in muck soils.


Subject(s)
Ascomycota , Soil , Anaerobiosis , Animals , Ohio , Plant Diseases , Soil Microbiology
6.
Bioresour Technol ; 394: 130020, 2024 Feb.
Article in English | MEDLINE | ID: mdl-37979882

ABSTRACT

The study assessed a co-processing system segregating food waste (FW) with different impurities into liquid (slurry) and solid fractions and treated using anaerobic digestion (AD) and pyrolysis (Py), respectively, which is defined as ADCo-Py. Biomethane potential tests showed higher methane yield from the FW slurry fraction (572.88 mL/gVSFW) compared to the whole FW (294.37 mL/gVSFW). Pyrolyzing the FW solid fraction reduced nitrogen compounds in bio-oil by 62 % compared to the whole FW. The energy balance and economic feasibility of ADCo-Py were compared with stand-alone AD, Py, and AD integrated with incineration (ADCo-INC). While all systems required extra energy, stand-alone Py and ADCo-INC needed 3.8 and 2.8 times more energy than ADCo-Py, respectively. Techno-economic analysis favored ADCo-Py, with a net present value (NPV) of $15 million and an internal rate of return (IRR) of 34 %. These findings highlighted FW separation as a promising approach, aligning with energy and economic goals in sustainable FW management.


Subject(s)
Refuse Disposal , Waste Management , Food Loss and Waste , Food , Incineration , Methane , Anaerobiosis , Bioreactors
7.
ChemSusChem ; : e202401399, 2024 Aug 28.
Article in English | MEDLINE | ID: mdl-39193807

ABSTRACT

Lignin is an abundant renewable source of aromatics, but its complex heterogeneous structure poses challenges for its depolymerization and valorization. Heterogeneously catalyzed reductive depolymerization (HCRD) has emerged as a promising approach, utilizing heterogeneous catalysts to facilitate selective bond cleavage in lignin and hydrogen transfer to stabilize the products under mild conditions. This review provides a comprehensive understanding of the hydrogen transfer mechanisms in HCRD involving different hydrogen sources including molecular hydrogen, alcohols, formic acid, etc., and the native hydrogen donor groups in lignin. Recent advances in catalyst design for efficient lignin depolymerization are systematically discussed, focusing on precious metal-based (Pt, Ru, Pd) and non-precious metal-based catalysts. Factors influencing catalyst performance, such as metal-support interactions, promoters, and synergistic effects, are highlighted. The diverse array of high-value aromatic chemicals obtained from HCRD is overviewed. Finally, the significance of HCRD in the context of lignin valorization and the development of integrated biorefineries is discussed, underscoring its potential to contribute to a sustainable bioeconomy.

8.
Waste Manag ; 179: 130-143, 2024 Apr 30.
Article in English | MEDLINE | ID: mdl-38471251

ABSTRACT

This research conducted an environmental life cycle assessment (LCA) to evaluate an anaerobic digestion-co-pyrolysis (ADCo-Py) system in which pyrolysis was added to traditional food waste (FW) anaerobic digestion (AD) systems to treat the solid fraction and impurities separated from FW. The solid fraction, including impurities such as wooden chopsticks, plastics, eggshells, and bones, is usually incinerated, while pyrolysis can be a viable alternative to optimize FW treatment. The environmental impact of ADCo-Py was compared with stand-alone AD, pyrolysis, and ADCo-INC (AD with incineration of separated solids). The results indicated that both ADCo-Py (-1.726 kg CO2-Eq/kgFW) and ADCo-INC (-1.535 kg CO2-Eq/kgFW) outperform stand-alone AD (-0.855 kg CO2-Eq/kgFW) and pyrolysis (-0.181 kg CO2-Eq/kgFW) in mitigating global warming potential (GWP). Additionally, pretreatments were found to have the most significant influence on GWP, ecotoxicity potential (ETP), and acidification potential (AP). The two-step pretreatment in ADCo-Py, including the separation of solids and drying, significantly improved the environmental sustainability of the system when compared with standalone pyrolysis.


Subject(s)
Refuse Disposal , Waste Management , Refuse Disposal/methods , Waste Management/methods , Food Loss and Waste , Carbon Dioxide , Pyrolysis , Anaerobiosis , Food
9.
Mar Pollut Bull ; 186: 114459, 2023 Jan.
Article in English | MEDLINE | ID: mdl-36529016

ABSTRACT

This study aimed to evaluate the correlation between microecology of sediments and water as well as their spatial-temporal variations in Changshou Lake. The results demonstrated that microecology in the lake exhibits spatiotemporal heterogeneity, and microbial diversity of sediments was significantly higher than that of water body. Further, it was found that there was statistically insignificant positive correlation between microecology of sediments and that of water body. PCoA and community structure analysis revealed that the predominant phyla which exhibited significant spatial differences in sediments were Proteobacteria, Actinobacteria and Planctomycetes. While, the distribution of dominant bacteria Actinobacteria and Verrucomicrobia in water body showed significant seasonal differences. Microbial networks analysis indicated that there was a cooperative symbiotic relationship between lake microbial communities. Notably, the same bacterial genus had no significant positive correlation in sediment and water, which suggested that bacteria transport between sediment-water interface does not influence the microecological functions of lake water.


Subject(s)
Bacteria , Water , Seasons , Bacteria/genetics , Lakes/chemistry , China , Geologic Sediments/chemistry , RNA, Ribosomal, 16S
10.
Sci Total Environ ; 836: 155549, 2022 Aug 25.
Article in English | MEDLINE | ID: mdl-35490816

ABSTRACT

Sewage sludge, including those after biological or thermochemical treatments, has the potential to be used as fertilizers for recycle of resources. However, its potential ecological risk is also of great concern to policy making. This study employed comprehensive ecological risk assessment (ERA) methods to evaluate the risk caused by the toxic metal(loid)s in sewage sludge throughout China. The conventional geo-accumulation index and potential ecological risk index revealed that cadmium (Cd) and mercury (Hg) were of significant concern in treating sewage sludge before land application, but chromium (Cr) and zinc (Zn) were preferred by potential affected proportion (PAF) and overall risk probability (ORP) of species sensitivity distribution (SSD). Because SSD considered both the community and the ecotoxicity of toxic metal(loid)s, it was more advantageous and promising in assessing ecological risks caused by land application of sewage sludge. Based on the predicted no-effect concentration (PNEC) of toxic metal(loid) calculated by hazardous concentration that cause death of 50% of species (HC50) by SSD, the maximum allowable disposal amount (MADA) of sewage sludge in the whole China indicated that chromium (Cr) should be totally eliminated because of its high risks in the present background soil. After excluding Cr, the MADA of sewage sludge in China was 3.24 × 106 t and 6.47 × 107 t under land application scenarios with high and low ecological risks, respectively. Additionally, the MADA could be increased by mixing sewage sludge with deeper soil in wider areas. This study emphasized that local laws and regulations on land application of sewage sludge and the subsequent ERA system need to be addressed in the future.


Subject(s)
Mercury , Metals, Heavy , Soil Pollutants , China , Chromium/toxicity , Environmental Monitoring/methods , Metals, Heavy/analysis , Metals, Heavy/toxicity , Risk Assessment , Sewage/analysis , Soil , Soil Pollutants/analysis , Soil Pollutants/toxicity
11.
Waste Manag ; 147: 30-35, 2022 Jun 15.
Article in English | MEDLINE | ID: mdl-35597167

ABSTRACT

This study aimed to investigate the changes of swine and dairy manure characteristics during a long-term storage (150-180 days) under 4 °C, 20 °C, and 37 °C, sealed and unsealed conditions. Water extractable phosphorus (WEP) of both manures rapidly increased during the first 15-30 days and then decreased. At the end of the storage, the WEP reduction was 90%±3% and 71%±5% of the initial concentration for swine manure and dairy manure, respectively. Generally, unsealed storage and higher temperatures led to more WEP reduction. This study suggested that manure stored for less than 30 days had the highest P runoff potential, while a long-term manure storage reduced P runoff potential compared to freshly excreted manure.


Subject(s)
Manure , Water Pollutants , Animals , Livestock , Phosphorus , Swine , Water , Water Movements , Water Pollutants/analysis
12.
Environ Sci Pollut Res Int ; 29(40): 61236-61246, 2022 Aug.
Article in English | MEDLINE | ID: mdl-35438402

ABSTRACT

Both arsenic (As) and antimony (Sb) are primary environmental contaminants that often co-exist at contaminated sites. Though the microbial community compositions of As- and Sb-contaminated sites have been previously described, the changes in microbial community interactions and community functions remain elusive. In the current study, several key metabolic processes, such as As/Sb detoxification and carbon fixation, were enriched under heavily contaminated conditions. Furthermore, the identified keystone taxa, which are associated with the families Nitrosomonadaceae, Pedosphaeraceae, Halieaceae, and Latescibacterota, demonstrated positive correlations with As and Sb concentrations, indicating that they may be resistant to As and Sb toxicities. Accordingly, arsenic resistance-related functions, along with several functions such as carbon fixation, were found to be enriched in heavily contaminated sites. The current study elucidated the key microbial populations in As- and Sb-contaminated rice terraces and may provide useful information for remediation purposes.


Subject(s)
Arsenic , Oryza , Soil Pollutants , Antimony/analysis , Arsenic/analysis , Environmental Monitoring , Humans , Oryza/metabolism , Soil , Soil Pollutants/analysis
13.
Bioresour Technol ; 338: 125486, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34273626

ABSTRACT

The integration of anaerobic digestion (AD) and pyrolysis (Py) could be a solution to economically utilize the organic fraction of municipal solid waste (OFMSW). However, it is not clear whether the environmental impact of the integrated pathway always outperforms the two single technologies. In this study, two integrated pathways (AD-Py, Py-AD) were compared with single AD and Py from the life cycle environmental impacts point of view. The results indicate that the environmental impacts of the four pathways are heavily dependent on their energy inputs and outputs. AD-Py is more environmentally friendly (-11.53 of total environmental impact /kg OFMSW) than single AD or Py. Py-AD exhibites the heaviest environmental burden (2.75 of total environmental impact /kg OFMSW) in all pathways. Therefore, AD-Py can be the top priority of treating OFMSW among the four pathways from the environmental viewpoint. This work could provide a theoretical support for the utilization of OFMSW.


Subject(s)
Refuse Disposal , Solid Waste , Anaerobiosis , Animals , Bioreactors , Life Cycle Stages , Methane , Pyrolysis , Solid Waste/analysis
14.
Environ Pollut ; 291: 118248, 2021 Dec 15.
Article in English | MEDLINE | ID: mdl-34592324

ABSTRACT

A nitrogen (N) deficiency will usually hinder bioremediation efforts in mining-derived habitats such as occurring in mining regions. Diazotrophs can provide N to support the growth of plants and microorganisms in these environments. However, diazotrophic communities in mining areas have been not studied frequently and are more poorly understood than those in other environments, such as in agricultural soils or in the presence of legumes. The current study compares the differences in depth-resolved diazotrophic community compositions and interactions in two contrasting sites (to depths of 2 m), including a highly contaminated and a moderately contaminated site. Antimony (Sb) and arsenic (As) co-contamination induced a loosely connected biotic interaction, and a selection of deep soils by diazotrophic communities. Multiple lines of evidence, including the enrichment of diazotrophic taxa in the highly contaminated sites, microbe-microbe interactions, environment-microbe interactions, and a machine learning approach (random forests regression), demonstrated that Rhizobium was the keystone taxon within the vertical profile of contaminated soil and was resistant to the Sb and As contaminant fractions. All of these observations suggest that one diazotroph, Rhizobium, may play an important role in N fixation in the examined contaminated sites.


Subject(s)
Arsenic , Soil Pollutants , Antimony/analysis , Arsenic/analysis , Environmental Monitoring , Soil , Soil Microbiology , Soil Pollutants/analysis
15.
Environ Int ; 153: 106522, 2021 08.
Article in English | MEDLINE | ID: mdl-33812041

ABSTRACT

Microorganisms can mediate arsenic (As) and antimony (Sb) transformation and thus change the As and Sb toxicity and mobility. The influence of As and Sb on the innate microbiome has been extensively characterized. However, how microbial metabolic potentials are influenced by the As and Sb co-contamination is still ambiguous. In this study, we selected two contrasting sites located in the Shimen realgar mine, the largest realgar mine in Asia, to explore the adaptability and response of the soil microbiome to As and Sb co-contamination and the impact of co-contamination on microbial metabolic potentials. It is observed that the geochemical parameters, including the As and Sb fractions, were the driving forces that reshaped the community composition and metabolic potentials. Bacteria associated with Bradyrhizobium, Nocardioides, Sphingomonas, Burkholderia, and Streptomyces were predicted to be tolerant to high concentrations of As and Sb. Co-occurrence network analysis revealed that the genes related to C fixation, nitrate/nitrite reduction, N fixation, and sulfate reduction were positively correlated with the As and Sb fractions, suggesting that As and Sb biogeochemical cycling may interact with and benefit from C, N, and S cycling. The results suggest that As and Sb co-contamination not only influences As-related genes, but also influences other genes correlated with microbial C, N, and S cycling.


Subject(s)
Arsenic , Microbiota , Soil Pollutants , Antimony/toxicity , Arsenic/analysis , Arsenic/toxicity , Asia , Carbon , Environmental Monitoring , Nitrogen , Soil , Soil Pollutants/analysis , Soil Pollutants/toxicity , Sulfur
16.
FEMS Microbiol Ecol ; 97(5)2021 04 13.
Article in English | MEDLINE | ID: mdl-33791784

ABSTRACT

Antimony (Sb), the analog of arsenic (As), is a toxic metalloid that poses risks to the environment and human health. Antimonite (Sb(III)) oxidation can decrease Sb toxicity, which contributes to the bioremediation of Sb contamination. Bacteria can oxidize Sb(III), but the current knowledge regarding Sb(III)-oxidizing bacteria (SbOB) is limited to pure culture studies, thus underestimating the diversity of SbOB. In this study, Sb(III)-oxidizing microcosms were set up using Sb-contaminated rice paddies as inocula. Sb(III) oxidation driven by microorganisms was observed in the microcosms. The increasing copies and transcription of the arsenate-oxidizing gene, aioA, in the microcosms during biotic Sb(III) oxidation indicated that microorganisms mediated Sb(III) oxidation via the aioA genes. Furthermore, a novel combination of DNA-SIP and shotgun metagenomic was applied to identify the SbOB and predict their metabolic potential. Several putative SbOB were identified, including Paracoccus, Rhizobium, Achromobacter and Hydrogenophaga. Furthermore, the metagenomic analysis indicated that all of these putative SbOB contained aioA genes, confirming their roles in Sb(III) oxidation. These results suggested the concept of proof of combining DNA-SIP and shotgun metagenomics directly. In addition, the identification of the novel putative SbOB expands the current knowledge regarding the diversity of SbOB.


Subject(s)
Arsenic , Soil Pollutants , Antimony/analysis , DNA , Humans , Metagenomics , Oxidation-Reduction , Soil , Soil Microbiology , Soil Pollutants/analysis
17.
Sci Total Environ ; 771: 145408, 2021 Jun 01.
Article in English | MEDLINE | ID: mdl-33736169

ABSTRACT

The accumulation of antimony (Sb) by rice is a severe threat to exposed populations. Previous studies demonstrated that, compared to flooded (anaerobic) water management, dry cultivation management (aerobic) could substantially decrease As, an analog of Sb, uptake by rice. However, the effects of different water management strategies on the accumulation of Sb by rice are less understood. It is proposed that microorganisms play an important role in regulating Sb mobility in rice paddies. Hence, the current study compared the microbial communities in rice paddies receiving different water management, i.e., flooded (anaerobic) and dry (aerobic)) rice cultivation. Significant decrease in Sb uptake by rice, in both the roots and grains, was observed under the aerobic compared to the anaerobic conditions. This could partially be attributed to the differences in the microbial communities as shaped by the redox environment. In aerobic soils, the gene responsible for Sb oxidation (i.e., aioA) was significantly, while in anaerobic soils the gene responsible for Sb reduction (i.e., arrA) was enriched, suggesting that variation in redox conditions may trigger different microbial responses. Accordingly, geochemical analysis indicated that accumulation of Sb(III) was only observed under anaerobic conditions, but not under aerobic conditions. The environment-microbe interactions were distinct between the two treatments with a greater number of interactions between Sb fractions and the microbial assemblage under anaerobic conditions, while Eh was the most influential geochemical parameter under aerobic conditions. Finally, the presence of a core microbiome under the two conditions suggested the possibility of microorganisms that support rice growth, nutrition, and health. The reduction of Sb in rice grain significantly decreases Sb exposure to the residents in Sb contaminated regions, and should be considered for future rice cultivation practices.


Subject(s)
Arsenic , Microbiota , Oryza , Soil Pollutants , Anaerobiosis , Antimony/analysis , Arsenic/analysis , Environmental Monitoring , Soil , Soil Microbiology , Soil Pollutants/analysis
18.
Sci Total Environ ; 771: 144807, 2021 Jun 01.
Article in English | MEDLINE | ID: mdl-33548700

ABSTRACT

The biodegradation of aniline is an important process related to the attenuation of aniline pollution at contaminated sites. Aniline contamination could occur in various pH (i.e., acidic, neutral, and alkaline) environments. However, little is known about preferred pH conditions of diverse aniline degraders at different sites. This study investigated the active aniline degraders present under contrasting pH environments using three aniline-contaminated cultures, namely, acidic sludge (ACID-S, pH 3.1), neutral river sediment (NEUS, pH 6.6), and alkaline paddy soil (ALKP, pH 8.7). Here, DNA-based stable isotope probing coupled with high-throughput sequencing revealed that aniline degradation was associated with Armatimonadetes sp., Tepidisphaerales sp., and Rhizobiaceae sp. in ACID-S; Thauera sp., Zoogloea sp., and Acidovorax sp. in NEUS; Delftia sp., Thauera sp., and Nocardioides sp. in ALKP. All the putative aniline-degrading bacteria identified were present in the "core" microbiome of these three cultures; however, only an appropriate pH may facilitate their ability to metabolize aniline. In addition, the biotic interactions between putative aniline-degrading bacteria and non-direct degraders showed different characteristics in three cultures, suggesting aniline-degrading bacteria employ diverse survival strategies in different pH environments. These findings expand our current knowledge regarding the diversity of aniline degraders and the environments they inhabit, and provide guidance related to the bioremediation of aniline contaminated sites with complex pH environments.


Subject(s)
Bacteria , Soil Microbiology , Aniline Compounds , Bacteria/genetics , Biodegradation, Environmental , High-Throughput Nucleotide Sequencing , Hydrogen-Ion Concentration , Isotopes
19.
Environ Sci Pollut Res Int ; 28(41): 58523-58535, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34115291

ABSTRACT

Soil contamination due to mining activities is a great concern in China. Although the effects of mining pollution resulting in changes of soil characteristics and the microbiome have been documented, studies on the responses of plant root-associated microbial assemblages remain scarce. In this work, we collected bulk soil, rhizosphere soil, and root endosphere samples of Cyperus rotundus L (Cyp) plants from two Pb/Zn mines, of which, one was abandoned (SL) and the other was active (GD), to investigate the bacterial community responses across different site contamination levels and Cyp plant compartments. For comparison, one unpolluted site (SD) was included. Results revealed that soils from the SL and GD sites were seriously contaminated by metal(loid)s, including Pb, Zn, As, and Sb. Bacterial richness and diversity depended on the sampling site and plant compartment. All sample types from the SL site had the lowest bacterial diversities and their bacterial communities also exhibited distinct patterns compared to GD and SD samples. As for the specific sampling site, bacterial communities from the root endosphere exhibited different patterns from those in bulk and rhizosphere soil. Compared to the GD and SD sites, the root endosphere and the rhizosphere soil from the SL site shared core microbes, including Halomonas, Pelagibacterium, and Chelativorans, suggesting that they play key roles in Cyp plant survival in such harsh environments.


Subject(s)
Cyperus , Soil Pollutants , Lead , Plant Roots/chemistry , Rhizosphere , Soil , Soil Microbiology , Soil Pollutants/analysis , Zinc
20.
Sci Total Environ ; 784: 147239, 2021 Aug 25.
Article in English | MEDLINE | ID: mdl-34088025

ABSTRACT

Anaerobic methane oxidation (AOM) plays an important role in sinking global methane and thereby in constraining climate change. Anthropogenic activities in antimony (Sb) mines have resulted in Sb contamination in rice fields, which are among the dominant methane sources. However, the knowledge of effects of Sb on AOM in paddy soils and the microbiota involved in this process remains limited. Herein, Sb was amended into the paddy soil to investigate the effects of Sb contamination on AOM and the microbial communities such as methanotrophs. Significant inhibition of AOM was observed in the treatment with Sb addition in comparison with the treatment without Sb addition. The significant increases in the abundance of the mcrA genes, responsible for methane production and oxidation, were observed in the treatment with/without Sb addition. In contrast, no significant increases in the copy number of the mcrA gene were detected in the treatment with the addition of the methanogenic and methanotrophic inhibitor 2-bromoethanesulfonate (BES). These results suggested that Sb contamination might inhibit only AOM but not methane production. In addition, amplicon high-throughput sequencing showed that the Sb addition impaired the diversity of microbial communities and impacted the biotic interactions in the soil. However, the abundance of bacterial methane-oxidizing phylum NC10 and its biotic connections with other microbes were enhanced by the addition of Sb. Pseudogulbenkiania and Methanosarcina dominated the bacterial and archaeal communities in the treatment without Sb addition, while the bacteria Ramlibacter and Geothrix and the archaea Methanomethylovorans were the most abundant genera in the treatment with Sb addition. These analyses of microbial communities indicated that Sb addition had significant effects on both the compositions of bacterial and archaeal communities. This study expands our knowledge of the effects of Sb contamination on AOM and the microbial (especially methanotrophs) diversity and composition in paddy soils.

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