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1.
J Eukaryot Microbiol ; 68(5): e12858, 2021 09.
Article in English | MEDLINE | ID: mdl-34022092

ABSTRACT

Filamentous green algae Chaetophorales present numerous taxonomic problems as many other green algae. Phylogenetic analyses based on nuclear genes have limited solutions. Studies with appropriate chloroplast molecular markers may solve this problems; however, suitable molecular markers for the order Chaetophorales are still unknown. In this study, 50 chloroplast genomes of Chlorophyceae, including 15 of Chaetophorales, were subjected to single protein-coding gene phylogenetic analyses, and substitution rate and evolutionary rate assays, and PCR amplification verification was conducted to screen the suitable molecular markers. Phylogenetic analyses of three chloroplast representative genes (psaB, tufA, and rbcL) amplified from 124 strains of Chaetophorales showed that phylogenetic relationships were not improved by increasing the number of samples, implying that the genes themselves, rather than limited samples, were the reason for the unsupported Topology I. Seven genes (atpF, atpI, ccsA, cemA, chlB, psbB, and rpl2) with robust support were selected to be the most suitable molecular markers for phylogenetic analyses of Chaetophorales, and the concatenated seven genes could replace the time-consuming and labor-intensive phylogenetic analyses based on chloroplast genome to some extent. To further solve the taxonomic problems of Chaetophorales, suitable chloroplast markers combined with more taxon-rich approach could be helpful and efficient.


Subject(s)
Chlorophyceae , Chlorophyta , Genome, Chloroplast , Base Sequence , Chlorophyceae/genetics , Chlorophyta/genetics , DNA, Chloroplast/genetics , Evolution, Molecular , Phylogeny
2.
Sensors (Basel) ; 18(4)2018 Mar 21.
Article in English | MEDLINE | ID: mdl-29561825

ABSTRACT

Because little is known about the atomization theory of a micro-tapered aperture atomizer, we investigated the vibration characteristics of this type of atomizer. The atomization mechanism of a micro-tapered aperture atomizer was described, and the atomization rate equation was deduced. As observed via microscopy, the angle of the micro-tapered aperture changes with the applied voltage, which proved the existence of a dynamic cone angle. The forward and reverse atomization rates were measured at various voltages, and the influence of the micro-tapered aperture and its variation on the atomization rate was characterized. The resonance frequency of the piezoelectric vibrator was obtained using a laser vibrometer, and the atomization rates were measured at each resonance frequency. From experiments, we found that the atomization rates at the first five resonance frequencies increased as the working frequency increased. At the fifth resonance frequency (121.1 kHz), the atomization rate was maximized (0.561 mL/min), and at the sixth resonance frequency (148.3 kHz), the atomization rate decreased significantly (0.198 mL/min). The experimental results show that the vibration characteristics of the piezoelectric vibrator have a relatively strong impact on the atomization rate. This research is expected to contribute to the manufacture of micro-tapered aperture atomizers.

3.
Sensors (Basel) ; 18(7)2018 Jul 17.
Article in English | MEDLINE | ID: mdl-30018204

ABSTRACT

In this study, we examined the use of a dynamic micro-tapered hole as a micro-scale tapered flow tube valveless piezoelectric pump. Firstly, we obtained photographs of a micro-tapered hole by using an environmental scanning electron microscope (ESEM). Then, we explained the pump effect of the micro-tapered hole, and derived the atomization rate equation. Furthermore, we reported an atomization rate measurement experiment that eliminated the atomization caused by a pressure increase, and demonstrated that a change in the volume of a micro-tapered hole could produce atomization. The experimental results indicate that, under the same voltage, the forward atomization rate is much higher than the reverse atomization rate and that the atomization rate increases with the micro-tapered hole volume. The experimental results show that the atomization of the micro-tapered aperture atomizer is caused by its pumping effect. Moreover, the flow resistance and volume of the micro-tapered hole can affect the atomization rate.

4.
Gene ; 863: 147287, 2023 May 05.
Article in English | MEDLINE | ID: mdl-36804852

ABSTRACT

The little-known order Watanabeales currently includes 10 genera with Chlorella-like species that reproduce by unequal-sized autospores and are predominantly solitary or terrestrial. The taxonomic scheme of Watanabeales has only been primarily inferred by short and less informative rDNA phylogenetic analysis. In the present study, seven newly sequenced genomes and one reported chloroplast genome representing the existing major branches of Watanabeales were harvested to phylogenetically reconstruct this order and to further understand its evolution. All chloroplast genomes of Watanabeales ranging from 133 to 274 kb were circular mapping and lacked a quadripartite structure. The chloroplast genome size, GC content, number of introns, and length of intergenic region proportion of the Watanabeales showed consistent trends, with Calidiella yingdensis D201 and Kalinella pachyderma 2601 having the lowest and highest values, respectively, echoing the positive correlation between organismal size and genome size. Phylogenetic analysis of Watanabeales based on 76 protein-coding genes coupled with the establishment of various complex analytical methods determined the unique robust taxonomic scheme which was incongruent with rDNA. Comparative genomic analyses revealed that the chloroplast genomes of Watanabeales accounted for numerous complex rearrangements and inversions which indicated high cryptic diversity. Substitution rate estimation indicated that the chloroplast genomes of Watanabeales were under purifying selection and similar evolutionary pressure and supported the view that genus Symbiochloris should be excluded from Watanabeales. Our results enrich the chloroplast genome resources of Watanabeales, clarify the phylogenetic status of species within this order, and provide more reference information for subsequent taxonomic and phylogenetic study.


Subject(s)
Chlorella , Genome, Chloroplast , Phylogeny , Base Sequence , DNA, Ribosomal
5.
PhytoKeys ; 204: 83-95, 2022.
Article in English | MEDLINE | ID: mdl-36760612

ABSTRACT

There is only one species of Spongiosarcinopsis in the literature currently. It was found in gray soil in Russia for the first time. According to molecular data analysis results, the isolated algal strain is most closely related to Spongiosarcinopsisterrestris. Unlike Spongiosarcinopsisterrestris, the isolated strain was found on soil surfaces at high altitudes, the young vegetative cell is spherical, vegetative cells are relatively large, and pyrenoids are generally fewer. In view of such morphological differences, phylogenetic analysis results, and comparison of ITS2 secondary structure and ultrastructure, the strain isolated in the present study was proposed to be a novel species.

6.
Rev Sci Instrum ; 93(10): 105004, 2022 Oct 01.
Article in English | MEDLINE | ID: mdl-36319396

ABSTRACT

In order to apply a valve-less piezoelectric pump in navigation equipment, this work first revealed a valve-less piezoelectric pump with arc-shaped tubes and then researched the relationship between the main structural parameters of arc-shaped tubes and the output flow rate. According to the velocity difference between clockwise and counterclockwise directions of liquid in circular arc-shaped tubes, the flow characteristics of liquid in circular arc-shaped tubes are analyzed in this paper, and the velocity difference model and flow equation of a piezoelectric pump are established. By using three-dimensional printing technology, five types of prototypes with different parameters were made, and the experimental research was carried out. The results show that at the optimal frequency, the pump output flow is the largest. The output flow is proportional to the driving voltage, the base circle radius, and the cross section area of the pipe. The low-cost and miniaturized navigation equipment made by using the piezoelectric pump has potential application value in unmanned aerial vehicle and intelligent vehicle navigation.

7.
Micromachines (Basel) ; 13(10)2022 Sep 28.
Article in English | MEDLINE | ID: mdl-36295974

ABSTRACT

In this study, based on the working principle of the cardiac valve structure that prevents blood from flowing back, a piezoelectric pump with a cardiac valve-like structure (PPCVLS) is designed. The operating principles of cardiac-valve-like structures (CVLSs) are introduced. Furthermore, the closure conditions of the CVLSs on both sides of the flow channel are explored. The principle behind the working-state conversion between "valve-based" and "valve-less" of PPCVLS is also analyzed. A high-speed dynamic microscopic image-analysis system was utilized to observe and verify the working-state conversion between "valve-based" and "valve-less" PPCVLSs. The resonant frequency of the piezoelectric pump was measured by Doppler laser vibrometer, and the optimal working frequency of the piezoelectric vibrator was determined as 22.35 Hz. The prototype piezoelectric pump was fabricated by the 3D printing technique, and the output performance of the piezoelectric pump was also evaluated. The experimental results show that the piezoelectric pump is valve-based when the driving voltage is greater than 140V, and the piezoelectric pump is valve-less when the driving voltage is less than 140 V. Furthermore, the maximum output pressure of the piezoelectric pump was 199 mm H2O when driven by the applied voltage of 220 V at 7 Hz, while the maximum flow rate of the piezoelectric pump was 44.5 mL/min when driven by the applied voltage of 220 V at 11 Hz.

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