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1.

Insights Gained from Single-Cell Analysis of Immune Cells in the Tumor Microenvironment.

Ren, Xianwen; Zhang, Lei; Zhang, Yuanyuan; Li, Ziyi; Siemers, Nathan; Zhang, Zemin.

Annu Rev Immunol ; 39: 583-609, 2021 04 26.

Article in English | MEDLINE | ID: mdl-33637019

2.

Accelerating the understanding of cancer biology through the lens of genomics.

Wang, Dongfang; Liu, Baolin; Zhang, Zemin.

Cell ; 186(8): 1755-1771, 2023 04 13.

Article in English | MEDLINE | ID: mdl-37059071

3.

A pan-cancer single-cell panorama of human natural killer cells.

Tang, Fei; Li, Jinhu; Qi, Lu; Liu, Dongfang; Bo, Yufei; Qin, Shishang; Miao, Yuhui; Yu, Kezhuo; Hou, Wenhong; Li, Jianan; Peng, Jirun; Tian, Zhigang; Zhu, Linnan; Peng, Hui; Wang, Dongfang; Zhang, Zemin.

Cell ; 186(19): 4235-4251.e20, 2023 09 14.

Article in English | MEDLINE | ID: mdl-37607536

4.

A pan-cancer single-cell transcriptional atlas of tumor infiltrating myeloid cells.

Cheng, Sijin; Li, Ziyi; Gao, Ranran; Xing, Baocai; Gao, Yunong; Yang, Yu; Qin, Shishang; Zhang, Lei; Ouyang, Hanqiang; Du, Peng; Jiang, Liang; Zhang, Bin; Yang, Yue; Wang, Xiliang; Ren, Xianwen; Bei, Jin-Xin; Hu, Xueda; Bu, Zhaode; Ji, Jiafu; Zhang, Zemin.

Cell ; 184(3): 792-809.e23, 2021 02 04.

Article in English | MEDLINE | ID: mdl-33545035

5.

Single-Cell Analyses Inform Mechanisms of Myeloid-Targeted Therapies in Colon Cancer.

Zhang, Lei; Li, Ziyi; Skrzypczynska, Katarzyna M; Fang, Qiao; Zhang, Wei; O'Brien, Sarah A; He, Yao; Wang, Lynn; Zhang, Qiming; Kim, Aeryon; Gao, Ranran; Orf, Jessica; Wang, Tao; Sawant, Deepali; Kang, Jiajinlong; Bhatt, Dev; Lu, Daniel; Li, Chi-Ming; Rapaport, Aaron S; Perez, Kristy; Ye, Yingjiang; Wang, Shan; Hu, Xueda; Ren, Xianwen; Ouyang, Wenjun; Shen, Zhanlong; Egen, Jackson G; Zhang, Zemin; Yu, Xin.

Cell ; 181(2): 442-459.e29, 2020 04 16.

Article in English | MEDLINE | ID: mdl-32302573

6.

Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma.

Zhang, Qiming; He, Yao; Luo, Nan; Patel, Shashank J; Han, Yanjie; Gao, Ranran; Modak, Madhura; Carotta, Sebastian; Haslinger, Christian; Kind, David; Peet, Gregory W; Zhong, Guojie; Lu, Shuangjia; Zhu, Weihua; Mao, Yilei; Xiao, Mengmeng; Bergmann, Michael; Hu, Xueda; Kerkar, Sid P; Vogt, Anne B; Pflanz, Stefan; Liu, Kang; Peng, Jirun; Ren, Xianwen; Zhang, Zemin.

Cell ; 179(4): 829-845.e20, 2019 Oct 31.

Article in English | MEDLINE | ID: mdl-31675496

7.

Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing.

Zheng, Chunhong; Zheng, Liangtao; Yoo, Jae-Kwang; Guo, Huahu; Zhang, Yuanyuan; Guo, Xinyi; Kang, Boxi; Hu, Ruozhen; Huang, Julie Y; Zhang, Qiming; Liu, Zhouzerui; Dong, Minghui; Hu, Xueda; Ouyang, Wenjun; Peng, Jirun; Zhang, Zemin.

Cell ; 169(7): 1342-1356.e16, 2017 Jun 15.

Article in English | MEDLINE | ID: mdl-28622514

8.

Decoding the genetic basis of anti-tumor immunity.

Zheng, Liangtao; Zhang, Zemin.

Immunity ; 54(2): 199-201, 2021 02 09.

Article in English | MEDLINE | ID: mdl-33567259

9.

SARS-CoV-2 exacerbates proinflammatory responses in myeloid cells through C-type lectin receptors and Tweety family member 2.

Lu, Qiao; Liu, Jia; Zhao, Shuai; Gomez Castro, Maria Florencia; Laurent-Rolle, Maudry; Dong, Jianbo; Ran, Xiaojuan; Damani-Yokota, Payal; Tang, Hongzhen; Karakousi, Triantafyllia; Son, Juhee; Kaczmarek, Maria E; Zhang, Ze; Yeung, Stephen T; McCune, Broc T; Chen, Rita E; Tang, Fei; Ren, Xianwen; Chen, Xufeng; Hsu, Jack C C; Teplova, Marianna; Huang, Betty; Deng, Haijing; Long, Zhilin; Mudianto, Tenny; Jin, Shumin; Lin, Peng; Du, Jasper; Zang, Ruochen; Su, Tina Tianjiao; Herrera, Alberto; Zhou, Ming; Yan, Renhong; Cui, Jia; Zhu, James; Zhou, Qiang; Wang, Tao; Ma, Jianzhu; Koralov, Sergei B; Zhang, Zemin; Aifantis, Iannis; Segal, Leopoldo N; Diamond, Michael S; Khanna, Kamal M; Stapleford, Kenneth A; Cresswell, Peter; Liu, Yue; Ding, Siyuan; Xie, Qi; Wang, Jun.

Immunity ; 54(6): 1304-1319.e9, 2021 06 08.

Article in English | MEDLINE | ID: mdl-34048708

10.

Liver tumour immune microenvironment subtypes and neutrophil heterogeneity.

Xue, Ruidong; Zhang, Qiming; Cao, Qi; Kong, Ruirui; Xiang, Xiao; Liu, Hengkang; Feng, Mei; Wang, Fangyanni; Cheng, Jinghui; Li, Zhao; Zhan, Qimin; Deng, Mi; Zhu, Jiye; Zhang, Zemin; Zhang, Ning.

Nature ; 612(7938): 141-147, 2022 12.

Article in English | MEDLINE | ID: mdl-36352227

11.

Genomic basis for RNA alterations in cancer.

Calabrese, Claudia; Davidson, Natalie R; Demircioglu, Deniz; Fonseca, Nuno A; He, Yao; Kahles, André; Lehmann, Kjong-Van; Liu, Fenglin; Shiraishi, Yuichi; Soulette, Cameron M; Urban, Lara; Greger, Liliana; Li, Siliang; Liu, Dongbing; Perry, Marc D; Xiang, Qian; Zhang, Fan; Zhang, Junjun; Bailey, Peter; Erkek, Serap; Hoadley, Katherine A; Hou, Yong; Huska, Matthew R; Kilpinen, Helena; Korbel, Jan O; Marin, Maximillian G; Markowski, Julia; Nandi, Tannistha; Pan-Hammarström, Qiang; Pedamallu, Chandra Sekhar; Siebert, Reiner; Stark, Stefan G; Su, Hong; Tan, Patrick; Waszak, Sebastian M; Yung, Christina; Zhu, Shida; Awadalla, Philip; Creighton, Chad J; Meyerson, Matthew; Ouellette, B F Francis; Wu, Kui; Yang, Huanming; Brazma, Alvis; Brooks, Angela N; Göke, Jonathan; Rätsch, Gunnar; Schwarz, Roland F; Stegle, Oliver; Zhang, Zemin.

Nature ; 578(7793): 129-136, 2020 02.

Article in English | MEDLINE | ID: mdl-32025019

12.

Lineage tracking reveals dynamic relationships of T cells in colorectal cancer.

Zhang, Lei; Yu, Xin; Zheng, Liangtao; Zhang, Yuanyuan; Li, Yansen; Fang, Qiao; Gao, Ranran; Kang, Boxi; Zhang, Qiming; Huang, Julie Y; Konno, Hiroyasu; Guo, Xinyi; Ye, Yingjiang; Gao, Songyuan; Wang, Shan; Hu, Xueda; Ren, Xianwen; Shen, Zhanlong; Ouyang, Wenjun; Zhang, Zemin.

Nature ; 564(7735): 268-272, 2018 12.

Article in English | MEDLINE | ID: mdl-30479382

13.

Author Correction: Genomic basis for RNA alterations in cancer.

Calabrese, Claudia; Davidson, Natalie R; Demircioglu, Deniz; Fonseca, Nuno A; He, Yao; Kahles, André; Lehmann, Kjong-Van; Liu, Fenglin; Shiraishi, Yuichi; Soulette, Cameron M; Urban, Lara; Greger, Liliana; Li, Siliang; Liu, Dongbing; Perry, Marc D; Xiang, Qian; Zhang, Fan; Zhang, Junjun; Bailey, Peter; Erkek, Serap; Hoadley, Katherine A; Hou, Yong; Huska, Matthew R; Kilpinen, Helena; Korbel, Jan O; Marin, Maximillian G; Markowski, Julia; Nandi, Tannistha; Pan-Hammarström, Qiang; Pedamallu, Chandra Sekhar; Siebert, Reiner; Stark, Stefan G; Su, Hong; Tan, Patrick; Waszak, Sebastian M; Yung, Christina; Zhu, Shida; Awadalla, Philip; Creighton, Chad J; Meyerson, Matthew; Ouellette, B F Francis; Wu, Kui; Yang, Huanming; Brazma, Alvis; Brooks, Angela N; Göke, Jonathan; Rätsch, Gunnar; Schwarz, Roland F; Stegle, Oliver; Zhang, Zemin.

Nature ; 614(7948): E37, 2023 Feb.

Article in English | MEDLINE | ID: mdl-36697831

14.

Effects of carbonization temperature and time on the characteristics of carbonized sludge.

Wan, Junjie; Feng, Xin; Li, Biqing; Wang, Mingsheng; Tang, Xia; Chen, Jun; Rong, Jianyun; Ma, ShanShan; Jiang, Yiwen; Zhang, Zemin.

Water Sci Technol ; 89(9): 2342-2366, 2024 May.

Article in English | MEDLINE | ID: mdl-38747953

15.

Single-cell RNA sequencing reveals intrahepatic and peripheral immune characteristics related to disease phases in HBV-infected patients.

Zhang, Chao; Li, Jiesheng; Cheng, Yongqian; Meng, Fanping; Song, Jin-Wen; Fan, Xing; Fan, Hongtao; Li, Jing; Fu, Yu-Long; Zhou, Ming-Ju; Hu, Wei; Wang, Si-Yu; Fu, Yuan-Jie; Zhang, Ji-Yuan; Xu, Ruo-Nan; Shi, Ming; Hu, Xueda; Zhang, Zemin; Ren, Xianwen; Wang, Fu-Sheng.

Gut ; 72(1): 153-167, 2023 01.

Article in English | MEDLINE | ID: mdl-35361683

16.

Single-Cell DNA Sequencing Reveals Punctuated and Gradual Clonal Evolution in Hepatocellular Carcinoma.

Guo, Lin; Yi, Xianfu; Chen, Lu; Zhang, Ti; Guo, Hua; Chen, Ziye; Cheng, Jinghui; Cao, Qi; Liu, Hengkang; Hou, Chunyu; Qi, Lisha; Zhu, Zhiyan; Liu, Yucun; Kong, Ruirui; Zhang, Chong; Zhou, Xiaohua; Zhang, Zemin; Song, Tianqiang; Xue, Ruidong; Zhang, Ning.

Gastroenterology ; 162(1): 238-252, 2022 01.

Article in English | MEDLINE | ID: mdl-34481846

17.

Precise Control of Crystallization and Phase-Transition with Green Anti-Solvent in Wide-Bandgap Perovskite Solar Cells with Open-Circuit Voltage Exceeding 1.25 V.

Zhang, Xinpeng; Li, Xiangyu; Tao, Lei; Zhang, Zemin; Ling, Hao; Fu, Xue; Wang, Shibo; Ko, Min Jae; Luo, Jingshan; Chen, Jiangzhao; Li, Yuelong.

Small ; 19(22): e2208289, 2023 Jun.

Article in English | MEDLINE | ID: mdl-36871149

18.

Large-Area Black Phosphorus/PtSe₂ Schottky Junction for High Operating Temperature Broadband Photodetectors.

Yang, Xue; Zhou, Xi; Li, Lei; Wang, Ning; Hao, Rui; Zhou, Yanan; Xu, Hua; Li, Yingtao; Zhu, Guangming; Zhang, Zemin; Wang, Junru; Feng, Qingliang.

Small ; 19(28): e2206590, 2023 Jul.

Article in English | MEDLINE | ID: mdl-36974583

19.

Effect of steric hindrance and number of substituents on the transfer and interface properties of Y-shaped hole-transporting materials for perovskite solar cells.

Zhang, Zemin; Tang, Zetian; Wang, Keliang; Wang, Ping; Yang, Jianfa.

Phys Chem Chem Phys ; 25(37): 25850-25861, 2023 Sep 27.

Article in English | MEDLINE | ID: mdl-37724976

20.

Criteria for Efficient Photocatalytic Water Splitting Revealed by Studying Carrier Dynamics in a Model Al-doped SrTiO₃ Photocatalyst.

Li, Ronghua; Takata, Tsuyoshi; Zhang, Beibei; Feng, Chao; Wu, Qianbao; Cui, Chunhua; Zhang, Zemin; Domen, Kazunari; Li, Yanbo.

Angew Chem Int Ed Engl ; 62(49): e202313537, 2023 Dec 04.

Article in English | MEDLINE | ID: mdl-37857989

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