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1.
J Gen Virol ; 102(3)2021 03.
Article in English | MEDLINE | ID: mdl-33331809

ABSTRACT

Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) is a typical single-layer capsid dsRNA virus belonging to the genus Cypovirus in the family Reoviridae. The results of cryo-electron microscopy showed that the BmCPV capsid consists of 60 asymmetric units, and each asymmetric unit contains one turret protein (TP), two large protrusion proteins (LPP) and two capsid shell proteins (CSP). CSP has the ability to self-assemble into virus-like particles (VLPs), and the small protrusion domain (SPD) in CSP may play an essential role in the assembly of viral capsids. In this study, three critical amino acid sites, D828, S829 and V945, in the SPD were efficiently mutated (point mutation) based on the principle of PCR circular mutagenesis. Moreover, a multi-gene expression system, Ac-MultiBac baculovirus, was used to produce eight different recombinant VLPs in vitro. Transmission electron microscopy showed that the single site and double site mutations had little effect on the efficiency and morphology of the assembly of VLPs. Still, the simultaneous mutation of the three sites had a significant impact. The experimental results demonstrate that the SPD of CSP plays an essential role in assembly of the viral capsid, which lays the foundation for further analysis of the molecular and structural mechanism of BmCPV capsid assembly.


Subject(s)
Capsid Proteins/metabolism , Reoviridae/genetics , Reoviridae/physiology , Virion/metabolism , Virus Assembly , Animals , Capsid Proteins/chemistry , Capsid Proteins/genetics , Gene Expression , Point Mutation , Reoviridae/ultrastructure , Sf9 Cells , Spodoptera , Virion/ultrastructure
2.
Arch Insect Biochem Physiol ; 103(3): e21616, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31502703

ABSTRACT

Recent years have shown a large increase in studies of infection of the silkworm (Bombyx mori) with Cypovirus 1 (previously designated as B. mori cytoplasmic polyhedrosis virus), that causes serious damage in sericulture. Cypovirus 1 has a single-layered capsid that encapsulates a segmented double-strand RNA (dsRNA) genome which are attractive features for the establishment of a biotechnological platform for the production of specialized gene silencing agents, either as recombinant viruses or as viral-like particles with nonreplicative dsRNA cargo. For both combatting viral disease and application of Cypovirus-based pest control, however, a better understanding is needed of the innate immune response caused by Cypovirus infection of the midgut of lepidopteran larvae. Studies of deep sequencing of viral small RNAs have indicated the importance of the RNA interference pathway in the control of Cypovirus infection although many functional aspects still need to be elucidated and conclusive evidence is lacking. A considerable number of transcriptome studies were carried out that revealed a complex response that hitherto remains uncharacterized because of a dearth in functional studies. Also, the uptake mechanism of Cypovirus by the midgut cells remains unclarified because of contrasting mechanisms revealed by electron microscopy and functional studies. The field will benefit from an increase in functional studies that will depend on transgenic silkworm technology and reverse genetics systems for Cypovirus 1.


Subject(s)
Bombyx/virology , Reoviridae/physiology , Animals , Bombyx/immunology , Gene Expression Regulation/immunology , Host-Pathogen Interactions/immunology , RNA/genetics , RNA/metabolism
3.
Mol Genet Genomics ; 294(4): 887-899, 2019 Aug.
Article in English | MEDLINE | ID: mdl-30923941

ABSTRACT

In insects, RNAi is considered the major antiviral immune defense pathway. DsRNAs produced during viral infection are processed by Dicer enzymes into small RNAs that function as specificity determinants to silence viral genes. By contrast, in mammals, recognition of molecules associated with viral infection, such as dsRNA, by pattern recognition receptors (PRRs) initiates a signaling cascade that culminates in the production and release of signaling proteins with antiviral function such as interferons. However, in insects, the hypothesis that components of virions can be recognized as pathogen-activated molecular patterns (PAMPs) to activate the innate immune response has not been investigated systematically. In this study, the potential of VP1, that constitutes the major capsid protein of cytoplasmic polyhedrosis virus (CPV; Reoviridae), to activate a collection of immune-related genes was examined in silkworm-derived Bm5 cells. Two different methods of VP1 administration were tested, either through endogenous expression in transformed cell lines, or through addition of purified VP1-based viral-like particles to the extracellular medium. In addition, exposure to CPV virions isolated from purified polyhedra was also performed. In general, our results do not show a robust transcriptional response of immune-related genes to VP1 or CPV virions, but two exceptions were noted. First, the expression of the antimicrobial peptide (AMP) gene Attacin was strongly induced after 24 h of exposure to VP1-based VLPs. Second, the expression levels of dcr-2, an essential gene in the RNAi pathway, were greatly increased in VP1-expressing transformed Sf21 cells but not transformed Bm5 cells, indicating the existence of species-specific effects. However, the increased expression of dcr-2 did not result in increased silencing efficiency when tested in an RNAi reporter assay. Our study indicates that the capsid protein VP1 of CPV has the potential to act as a PAMP and to induce a transcriptional response in insect cells that relate both to RNAi and protein effectors such as AMPs. The identity of the PRRs and the signaling cascade that are potentially triggered by VP1 remain to be elucidated in future experiments. While this study was performed on a small scale, it can encourage more comprehensive studies with high-throughput approaches (microarray, deep sequencing) to search more systematically whether viral capsid proteins can act as PAMPs in insects and whether their production results in the induction of immune-related genes with potential antiviral function.


Subject(s)
Bombyx/virology , Capsid Proteins/immunology , Insect Proteins/genetics , Reoviridae/metabolism , Virion/immunology , Animals , Bombyx/genetics , Bombyx/immunology , Cell Line , Gene Expression Profiling , High-Throughput Nucleotide Sequencing , Immunity, Innate , Pathogen-Associated Molecular Pattern Molecules/immunology , RNA Helicases/genetics , Reoviridae/immunology , Sf9 Cells , Species Specificity
4.
J Insect Sci ; 152015.
Article in English | MEDLINE | ID: mdl-26163666

ABSTRACT

Autophagy is associated with multiple biological processes and has protective and defensive functions with respect to immunity, inflammation, and resistance to microbial infection. In this experiment, we wished to investigate whether autophagy is a factor in the midgut cell response of Bombyx mori to infection by the B. mori cytoplasmic polyhedrosis virus (BmCPV). Our results indicated that the expression of three autophagy-related genes (BmAtg8, BmAtg5, and BmAtg7) in the midgut did not change greatly after BmCPV infection in B. mori. Basal ATG8/ATG8PE protein expression was detected in different B. mori tissues by using western blot analysis. Immunohistochemistry showed that the ATG8/ATG8PE proteins were located mainly in the cytoplasm. ATG8/ATG8PE protein levels decreased at 12 and 16 h after BmCPV infection. Our results indicate that autophagy responded slightly to BmCPV infection, but could not prevent the invasion and replication of the virus.


Subject(s)
Autophagy , Bombyx/physiology , Bombyx/virology , Gene Expression Regulation , Reoviridae/physiology , Animals , Bombyx/genetics , Digestive System/virology , Digestive System Physiological Phenomena
5.
J Invertebr Pathol ; 115: 8-13, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24211674

ABSTRACT

Digital Gene Expression was performed to investigate the midgut transcriptome profile of 4008 silkworm strain orally infected with BmCPV. A total of 4,498,263 and 4,258,240 clean tags were obtained from the control and BmCPV-infected larvae. A total of 752 differentially expressed genes were detected, of which 649 were upregulated and 103 were downregulated. Analysis results of the Kyoto Encyclopedia of Genes and Genomes pathway showed that 334 genes were involved in the ribosome and RNA transport pathways. Moreover, 408 of the 752 differentially expressed genes have a GO category and can be categorized into 41 functional groups according to molecular function, cellular component and biological process. Differentially expressed genes involved in signaling, gene expression, metabolic process, cell death, binding, and catalytic activity changes were detected in the expression profiles. Quantitative real-time PCR was performed to verify the expression of these genes. The upregulated expression levels of Calreticulin, FK506-binding protein, and protein kinase c inhibitor gene probably led to a calcium-dependent apoptosis in the BmCPV-infected cells. The results of this study may serve as a basis for future research not only on the molecular mechanism of BmCPV invasion but also on the anti-BmCPV mechanism of silkworm.


Subject(s)
Bombyx/genetics , Bombyx/virology , Host-Parasite Interactions/genetics , Reoviridae , Transcriptome , Animals , Gene Expression Profiling , Reoviridae/genetics , Reverse Transcriptase Polymerase Chain Reaction
6.
Microbiol Spectr ; 11(4): e0493822, 2023 08 17.
Article in English | MEDLINE | ID: mdl-37341621

ABSTRACT

Some insect viruses encode suppressors of RNA interference (RNAi) to counteract the antiviral RNAi pathway. However, it is unknown whether Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) encodes an RNAi suppressor. In this study, the presence of viral small interfering RNA (vsiRNA) in BmN cells infected with BmCPV was confirmed by small RNA sequencing. The Dual-Luciferase reporter test demonstrated that BmCPV infection may prevent firefly luciferase (Luc) gene silencing caused by particular short RNA. It was also established that the inhibition relied on the nonstructural protein NSP8, which suggests that NSP8 was a possible RNAi suppressor. In cultured BmN cells, the expressions of viral structural protein 1 (vp1) and NSP9 were triggered by overexpression of nsp8, suggesting that BmCPV proliferation was enhanced by NSP8. A pulldown assay was conducted with BmCPV genomic double-stranded RNA (dsRNA) labeled with biotin. The mass spectral detection of NSP8 in the pulldown complex suggests that NSP8 is capable of direct binding to BmCPV genomic dsRNA. The colocalization of NSP8 and B. mori Argonaute 2 (BmAgo2) was detected by an immunofluorescence assay, leading to the hypothesis that NSP8 interacts with BmAgo2. Coimmunoprecipitation further supported the present investigation. Moreover, vasa intronic protein, a component of RNA-induced silencing complex (RISC), could be detected in the coprecipitation complex of NSP8 by mass spectrum analysis. NSP8 and the mRNA decapping protein (Dcp2) were also discovered to colocalize to processing bodies (P bodies) for RNAi-mediated gene silencing in Saccharomyces cerevisiae. These findings revealed that by interacting with BmAgo2 and suppressing RNAi, NSP8 promoted BmCPV growth. IMPORTANCE It has been reported that the RNAi pathway is inhibited by binding RNAi suppressors encoded by some insect-specific viruses belonging to Dicistroviridae, Nodaviridae, or Birnaviridae to dsRNAs to protect dsRNAs from being cut by Dicer-2. However, it is unknown whether BmCPV, belonging to Spinareoviridae, encodes an RNAi suppressor. In this study, we found that nonstructural protein NSP8 encoded by BmCPV inhibits small interfering RNA (siRNA)-induced RNAi and that NSP8, as an RNAi suppressor, can bind to viral dsRNAs and interact with BmAgo2. Moreover, vasa intronic protein, a component of RISC, was found to interact with NSP8. Heterologously expressed NSP8 and Dcp2 were colocalized to P bodies in yeast. These results indicated that NSP8 promoted BmCPV proliferation by binding itself to BmCPV genomic dsRNAs and interacting with BmAgo2 through suppression of siRNA-induced RNAi. Our findings deepen our understanding of the game between BmCPV and silkworm in regulating viral infection.


Subject(s)
Reoviridae , RNA Interference , RNA, Small Interfering/genetics , Reoviridae/metabolism , RNA, Double-Stranded/metabolism , Cell Proliferation
7.
Biol Trace Elem Res ; 196(1): 290-296, 2020 Jul.
Article in English | MEDLINE | ID: mdl-31933281

ABSTRACT

Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) is a serious disease harmful to silk industry, which is one of the major sources of financial support for farmers in many developing countries. So far, there is still no good way to prevent or treat this disease. In this study, titanium dioxide nanoparticles (TiO2 NPs) were used to pretreat silkworm larvae, and good results were achieved in improving silkworm immunity and alleviating the damage of cytoplasmic polyhedrosis virus. The results showed that nano-titanium dioxide pretreatment could inhibit the proliferation of BmCPV in the midgut of silkworm, activate JAK/STAT and PI3K-AKT immune signaling pathways, and upregulate the expression of key immune genes, so as to improve the immunity of silkworm and enhance the resistance of silkworm to BmCPV.


Subject(s)
Antiviral Agents/pharmacology , Bombyx/drug effects , Nanoparticles/chemistry , Reoviridae/drug effects , Titanium/pharmacology , Animals , Antiviral Agents/chemistry , Bombyx/immunology , Microbial Sensitivity Tests , Reoviridae/immunology , Titanium/chemistry
8.
Insect Sci ; 27(3): 449-462, 2020 Jun.
Article in English | MEDLINE | ID: mdl-30869181

ABSTRACT

Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) is a major pathogen of the economic insect silkworm, Bombyx mori. Virus-encoded microRNAs (miRNAs) have been proven to play important roles in host-pathogen interactions. In this study we identified a BmCPV-derived miRNA-like 21 nt small RNA, BmCPV-miR-1, from the small RNA deep sequencing of BmCPV-infected silkworm larvae by stem-loop quantitative real-time PCR (qPCR) and investigated its functions with qPCR and lentiviral expression systems. Bombyx mori inhibitor of apoptosis protein (BmIAP) gene was predicted by both target prediction software miRanda and Targetscan to be one of its target genes with a binding site for BmCPV-miR-1 at the 5' untranslated region. It was found that the expression of BmCPV-miR-1 and its target gene BmIAP were both up-regulated in BmCPV-infected larvae. At the same time, it was confirmed that BmCPV-miR-1 could up-regulate the expression of BmIAP gene in HEK293T cells with lentiviral expression systems and in BmN cells by transfecting mimics. Furthermore, BmCPV-miR-1 mimics could up-regulate the expression level of BmIAP gene in midgut and fat body in the silkworm. In the midgut of BmCPV-infected larvae, BmCPV-miR-1 mimics could be further up-regulated and inhibitors could lower the virus-mediated expression of BmIAP gene. With the viral genomic RNA segments S1 and S10 as indicators, BmCPV-miR-1 mimics could up-regulate and inhibitors down-regulate their replication in the infected silkworm. These results implied that BmCPV-miR-1 could inhibit cell apoptosis in the infected silkworm through up-regulating BmIAP expression, providing the virus with a better cell circumstance for its replication.


Subject(s)
Bombyx/virology , Inhibitor of Apoptosis Proteins/metabolism , MicroRNAs/metabolism , RNA, Viral/metabolism , Reoviridae , Animals , Bombyx/metabolism , Gene Expression Profiling , HEK293 Cells , Host Microbial Interactions/genetics , Host Microbial Interactions/physiology , Humans , Insect Proteins/metabolism , Larva/metabolism , Larva/virology , Reoviridae/genetics , Reoviridae/metabolism , Sequence Analysis, RNA
9.
Dev Comp Immunol ; 88: 161-168, 2018 11.
Article in English | MEDLINE | ID: mdl-30031014

ABSTRACT

Bombyx mori cypovirus (BmCPV) enters permissive cells via clathrin-mediated endocytosis pathway. However, the distinct entry mechanism for BmCPV is still ambiguous. The aim of this study is to investigate the role of gangliosides and cholesterol in BmCPV cell entry. The number of BmCPV virions attached to the cell surface and the expression level of BmCPV vp1 gene was significantly decreased by digestion of terminal sialic acids in gangliosides with neuraminidase (NA). Preincubation of different concentration of ganglioside GM1, GM2 or GM3 with BmCPV prior to infection, the reduction of BmCPV infectivity was found by GM2-treated in a dose-depend manner. BmCPV virions were found to colocalize with GM2 in the cell surface. The infectivity of BmCPV was reduced by anti-GM2 antibody treatment cells. Moreover, BmCPV infection was impaired by depletion of membrane cholesterol with MßCD, but the inhibitory effect of MßCD was restored by supplementing with cholesterol. The number of viral particles attached on the BmN cells was significantly decreased by pretreated with MßCD, and BmCPV infection was inhibited by silencing the expression of 3-hydroxy-3-methylglutaryl-CoA reductase gene (Hmg-r) in cholesterol biosynthesis pathway. These results indicate that ganglioside GM2 and cholesterol in membrane lipid rafts are essential for BmCPV attachment to cell surface for its cell entry.


Subject(s)
Bombyx/immunology , Bombyx/virology , Cholesterol/immunology , G(M2) Ganglioside/immunology , Reoviridae/pathogenicity , Virus Internalization , Agriculture , Animals , Arthropod Proteins/genetics , Arthropod Proteins/immunology , Biosynthetic Pathways/genetics , Biosynthetic Pathways/immunology , Capsid Proteins/immunology , Cell Line , Cell Membrane/drug effects , Cell Membrane/immunology , Cholesterol/biosynthesis , Endocytosis/drug effects , Endocytosis/immunology , Host-Pathogen Interactions/immunology , Hydroxymethylglutaryl CoA Reductases/genetics , Hydroxymethylglutaryl CoA Reductases/metabolism , Virion/immunology , Virus Replication/immunology , beta-Cyclodextrins/pharmacology
10.
Dev Comp Immunol ; 87: 84-89, 2018 10.
Article in English | MEDLINE | ID: mdl-29902708

ABSTRACT

In insect innate immunity, peptidoglycan recognition proteins act as pattern recognition receptors, helping hosts combat invasive microorganisms. Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) is the main silkworm pathogen that invades the midgut columnar cell layer. We previously reported that B. mori peptidoglycan recognition protein S2 (BmPGRP-S2) was upregulated in silkworm larvae after BmCPV infection. Here, we constructed a transgenic vector overexpressing BmPGRP-S2 under the control of a midgut-specific promoter. Transgenic silkworm lines (PGRPS2-1 and PGRPS2-2) were generated via embryonic microinjection. BmPGRP-S2 was successfully overexpressed in transgenic silkworms and BmE cells. After oral inoculation with BmCPV, the mortality of PGRPS2-1 and PGRPS2-2 decreased by approximately 36% and 32%, respectively, compared with that of the non-transgenic line, and BmCPV mRNA contents were significantly lower. In the PGRPS2-1 line, imd, relish, and the antimicrobial peptide (AMP) genes attacin2, gloverin2, and moricin showed increased expression after viral infection; however, the Toll pathway was not activated. These results indicate that BmPGRP-S2 overexpression can activate the Imd pathway and induce AMP upregulation, enhancing silkworm antiviral resistance.


Subject(s)
Bombyx/immunology , Carrier Proteins/immunology , Insect Proteins/immunology , Reoviridae/immunology , Amino Acid Sequence , Animals , Animals, Genetically Modified , Antimicrobial Cationic Peptides/genetics , Antimicrobial Cationic Peptides/immunology , Antimicrobial Cationic Peptides/metabolism , Bombyx/genetics , Bombyx/virology , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cell Line , Gene Expression/immunology , Host-Pathogen Interactions , Insect Proteins/genetics , Insect Proteins/metabolism , Larva/genetics , Larva/immunology , Larva/virology , Reoviridae/physiology , Sequence Homology, Amino Acid , Signal Transduction/genetics , Signal Transduction/immunology
11.
J Proteomics ; 152: 300-311, 2017 01 30.
Article in English | MEDLINE | ID: mdl-27908826

ABSTRACT

Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) specifically infects the epithelial cells in the midgut of silkworm and causes them to death, which negatively affects the sericulture industry. In order to determine the midgut response at the protein levels to the virus infection, differential proteomes of the silkworm midgut responsive to BmCPV infection were identified with isobaric tags for relative and absolute quantitation (iTRAQ) labeling followed by liquid chromatography-tandem mass spectrometry (LC-MS/MS). 193, 408, 189 differentially expressed proteins (DEPs) were reliably quantified by iTRAQ analysis in the midgut of BmCPV-infected and control larvae at 24, 48, 72h post infection (hpi) respectively. KEGG enrichment analysis showed that Oxidative phosphorylation, amyotrophic lateral sclerosis, Toll-like receptor signaling pathway, steroid hormone biosynthesis were the significant pathways (Q value≤0.05) both at 24 and 48hpi. qRT-PCR was used to further verify gene transcription of 30 DEPs from iTRAQ, showing that the regulations of 24 genes at the transcript level were consistent with those at the proteomic level. Moreover, the cluster analysis of the three time groups showed that there were seven co-regulated DEPs including BGIBMGA002620-PA, which was a putative p62/sequestosome-1 protein in silkworm. It was upregulated at both the mRNA level and the proteomic level and may play an important role in regulating the autophagy and apoptosis (especially apoptosis) induced by BmCPV infection. This was the first report using an iTRAQ approach to analyze proteomes of the silkworm midgut against BmCPV infection, which contributes to understanding the defense mechanisms of silkworm midgut to virus infection. SIGNIFICANCE: The domesticated silkworm, Bombyx mori, is renowned for silk production as well as being a traditional lepidopteron model insect served as a subject for morphological, genetic, physiological, and developmental studies. Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) specifically infects the epithelial cells in the midgut of silkworm and causes the silkworm to death, which negatively affects the sericulture industry. Studies on insect antiviral immunity and on interactive mechanisms between host cells and BmCPV are in their infancy and remain insufficient. In order to obtain an overall view of silkworm response to BmCPV infection, we performed a proteomic analysis of the midgut of silkworm responses to BmCPV infection by iTRAQ. This was the first report using an iTRAQ approach to analyze proteomes of the silkworm midgut against BmCPV infection, which contributes to understanding the defense mechanisms of silkworm midgut to virus infection.


Subject(s)
Bombyx/virology , Digestive System/chemistry , Proteome/analysis , Proteomics/methods , Reoviridae/pathogenicity , Animals , Bombyx/anatomy & histology , Bombyx/chemistry , Chromatography, Liquid , Digestive System/virology , Gene Expression Profiling , Host-Pathogen Interactions/immunology , Insect Proteins/metabolism , RNA, Messenger , Tandem Mass Spectrometry
12.
Gene ; 575(2 Pt 1): 264-9, 2016 Jan 10.
Article in English | MEDLINE | ID: mdl-26348138

ABSTRACT

Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) is a major viral pathogen of silkworm and remains a big challenge to the sericultural industry. Insulin-related peptide binding protein 2 (IBP2) gene, induced by BmCPV infection may play an important role in B. mori immune response. MicroRNAs (miRNAs) are small noncoding RNAs that regulate gene expression at the post-transcriptional level and play an important role in various processes, including immunity and antiviral response. In this study, we identified IBP2 as one of the targets for miR-278-3p by using luciferase reporter assay. Overexpression of miR-278-3p negatively regulates the expression of IBP2 in silkworm larvae and positively regulates the mRNA transcript level of BmCPV. Our results suggest that miR-278-3p may play an important role in BmCPV replication. It's the first report on bmo-miRNAs in response to BmCPV infection and could provide a new clue to explore the molecular mechanism of BmCPV infection and host immunity.


Subject(s)
Bombyx/immunology , Bombyx/virology , DNA-Binding Proteins/immunology , Insect Proteins/immunology , MicroRNAs/immunology , Reoviridae/physiology , Virus Replication/immunology , Animals , Bombyx/genetics , DNA-Binding Proteins/genetics , Insect Proteins/genetics , Larva/genetics , Larva/immunology , Larva/virology , MicroRNAs/genetics , Virus Replication/genetics
13.
J Mol Graph Model ; 61: 160-74, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26264734

ABSTRACT

Antheraea mylitta cytoplasmic polyhedrosis virus (AmCPV) contains 11 double stranded RNA genome segments and infects tasar silkworm A. mylitta. RNA-dependent RNA polymerase (RdRp) is reported as a key enzyme responsible for propagation of the virus in the host cell but its structure function relationship still remains elusive. Here a computational approach has been taken to compare sequence and secondary structure of AmCPV RdRp with other viral RdRps to identify consensus motifs. Then a reliable pairwise sequence alignment of AmCPV RdRp with its closest sequence structure homologue λ3 RdRp is done to predict three dimensional structure of AmCPV RdRp. After comparing with other structurally known viral RdRps, important sequence and/or structural features involved in substrate entry or binding, polymerase reaction and the product release events have been identified. A conserved RNA pentanucleotide (5'-AGAGC-3') at the 3'-end of virus genome is predicted as cis-acting signal for RNA synthesis and its docking and simulation study along with the model of AmCPV RdRp has allowed to predict mode of template binding by the viral polymerase. It is found that template RNA enters into the catalytic center through nine sequence-independent and two sequence-dependent interactions with the specific amino acid residues. However, number of sequence dependent interactions remains almost same during 10 nano-second simulation time while total number of interactions decreases. Further, docking of N(7)-methyl-GpppG (mRNA cap) on the model as well as prediction of RNA secondary structure has shown the template entry process in the active site. These findings have led to postulate the mechanism of RNA-dependent RNA polymerization process by AmCPV RdRp. To our knowledge, this is the first report to evaluate structure function relationship of a cypoviral RdRp.


Subject(s)
Dinucleoside Phosphates/chemistry , Genome, Viral , RNA, Viral/chemistry , RNA-Dependent RNA Polymerase/chemistry , Reoviridae/chemistry , Viral Proteins/chemistry , Amino Acid Sequence , Animals , Catalytic Domain , Molecular Docking Simulation , Molecular Dynamics Simulation , Molecular Sequence Data , Moths/virology , Nucleic Acid Conformation , Protein Binding , Protein Structure, Secondary , Protein Structure, Tertiary , Reoviridae/enzymology , Sequence Alignment , Structural Homology, Protein , Substrate Specificity
14.
Gene ; 552(1): 24-31, 2014 Nov 15.
Article in English | MEDLINE | ID: mdl-25218236

ABSTRACT

In this study, the full-length cDNA of a peptidoglycan recognition protein named BmPGRP-S3 was identified from the silkworm, Bombyx mori by rapid amplification of cDNA ends. It is 807 bp and comprises the following: a 5'-untranslated region (UTR) with a length of 112 bp, a 3'-UTR with a length of 92 bp including a poly-adenylation signal sequence (AATAAA) and a poly(A) tail. The longest open reading frame (ORF) of BmPGRP-S3 is 603 bp and encodes a polypeptide of 200 amino acids with a predicted molecular weight of 22.3 kDa including a PGRP domain. Sequence similarity and phylogenic analysis results indicated that BmPGRP-S3 belongs to the group of insect PGRPs and is closer to BmPGRP-S4 with the highest identity of 68%. Fluorescent quantitative real-time PCR results revealed that the mRNA transcripts of BmPGRP-S3 were presented in all of the tissues, but were highest in the midgut. In the silkworm larvae infected with B. mori cytoplasmic polyhedrosis virus (BmCPV), the relative expression level of BmPGRP-S3 was upregulated. The DNA segment of a mature BmPGRP-S3 peptide was inserted into the expression plasmid pET-28a(+) to construct a recombinant expression plasmid. Western blot results revealed that mature BmPGRP-S3 could be detected in the hemolymph and midgut which were the most important immune tissues in silkworm. All the results suggested that BmPGRP-S3 may play an important role in the immune response of silkworm to BmCPV infection and provided helpful information for further studying the function of BmPGRP-S3 in silkworm.


Subject(s)
Bombyx/genetics , Carrier Proteins/genetics , Insect Proteins/genetics , Reoviridae Infections/genetics , Reoviridae/genetics , 3' Untranslated Regions/genetics , 5' Untranslated Regions/genetics , Amino Acid Sequence , Animals , Base Sequence , Bombyx/virology , Cloning, Molecular/methods , DNA, Complementary/genetics , Larva/genetics , Larva/virology , Molecular Sequence Data , Open Reading Frames/genetics , Phylogeny , RNA, Messenger/genetics , Reoviridae Infections/virology , Sequence Analysis, DNA
15.
J Insect Physiol ; 64: 21-9, 2014 May.
Article in English | MEDLINE | ID: mdl-24636911

ABSTRACT

While several studies have been conducted to investigate the stability of dsRNA in the extracellular medium (hemolymph, gut content, saliva), little is known regarding the persistence of dsRNA once it has been introduced into the cell. Here, we investigate the stability of Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) genomic dsRNA fragments after transfection into Bombyx-derived Bm5 cells. Using RT-PCR as a detection method, we found that dsRNA could persist for long periods (up to 8 days) in the intracellular environment. While the BmCPV genomic dsRNA was processed by the RNAi machinery, its presence had no effects on other RNAi processes, such as the silencing of a luciferase reporter by dsLuc. We also found that transfection of BmCPV genomic dsRNA could not establish a viral infection in the Bm5 cells, even when co-transfections were carried out with dsRNAs targeting Dicer and Argonaute genes, suggesting that the neutralization by RNAi does not play a role in the establishment of an in vitro culture system. The mechanism of the dsRNA stability in Bm5 cells is discussed, as well as the implications for the establishment for an in vitro culture system for BmCPV.


Subject(s)
Bombyx/virology , RNA Interference , Reoviridae/immunology , Animals , Cells, Cultured , Gene Silencing , Luciferases , RNA, Double-Stranded , Nicotiana/virology , Transfection
16.
Gene ; 539(2): 230-7, 2014 Apr 15.
Article in English | MEDLINE | ID: mdl-24525400

ABSTRACT

Digital gene expression (DGE) was performed to investigate the gene expression profiles of 4008 and p50 silkworm strains at 48 h after oral infection with BmCPV. 3,668,437 clean tags were identified in the BmCPV-infected p50 silkworms and 3,540,790 clean tags in the control p50. By contrast, 4,498,263 clean tags were identified in the BmCPV-infected 4008 silkworms and 4,164,250 clean tags in the control 4008. A total of 691 differentially expressed genes were detected in the infected 4008 DGE library and 185 were detected in the infected p50 DGE library, respectively. The expression profiles identified some important differentially expressed genes involved in signal transduction, enzyme activity and apoptotic changes, some of which were verified using quantitative real-time PCR (qRT-PCR). These results provide important clues on the molecular mechanism of BmCPV invasion and resistance mechanism of silkworms against BmCPV infection.


Subject(s)
Biomarkers/metabolism , Bombyx/genetics , Bombyx/virology , Disease Susceptibility , Gene Expression Profiling , Reoviridae Infections/genetics , Reoviridae Infections/virology , Reoviridae/pathogenicity , Animals , Bombyx/classification , Gene Regulatory Networks , Host-Pathogen Interactions , Oligonucleotide Array Sequence Analysis , RNA, Messenger/genetics , Reverse Transcriptase Polymerase Chain Reaction
17.
Braz J Microbiol ; 44(4): 1231-6, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24688516

ABSTRACT

This research was carried out to examine cytopathological effects of Helicoverpa armigera Cytoplasmic polyhedrosis virus (HaCPV) on infected midgut cotton bollworm (Helicoverpa armigera) using transmission and scanning electron microscope. The symptoms on infected host larvae of the host, compared with healthy ones, were getting swollen with milky-white and fragile Histopathological examinations showed infection with HaCPV small polyhedral inclusion bodies (PIB) after 1 or 2 days which were observed in columnar cells of midgut. Virions were partially or completely occupied in a polyhedral matrix to form polyhedral inclusion bodies (PIB) at periphery of virogenic stroma. PIBs were measured 0.5 to 3.5 µm and virions about 46 nm in diameter. Microvilli of infected columnar cells were affected and degenerated immediately prior to rupture of the cell. Some infected columnar cells ruptured to release PIB into the gut lumen 3 days after infection. In addition, PIB were found in goblet cells, 5 or 6 days after infection. Infected goblet cells degenerate to such an extent that only a few of the original microvillus-like cytoplasmic projections and cell organells were left. These cytopathic effects caused in the midgut by HaCPV on cotton bollworm larvae are essentially similar to those have been reported for lepidoperan and dipteran infection by CPV.


Subject(s)
Lepidoptera/virology , Reoviridae/growth & development , Animals , Gastrointestinal Tract/pathology , Histocytochemistry , Larva/virology , Microscopy, Electron, Scanning , Microscopy, Electron, Transmission
18.
Braz. j. microbiol ; 44(4): 1231-1236, Oct.-Dec. 2013. ilus
Article in English | LILACS | ID: lil-705263

ABSTRACT

This research was carried out to examine cytopathological effects of Helicoverpa armigera Cytoplasmic polyhedrosis virus (HaCPV) on infected midgut cotton bollworm (Helicoverpa armigera) using transmission and scanning electron microscope. The symptoms on infected host larvae of the host, compared with healthy ones, were getting swollen with milky-white and fragile Histopathological examinations showed infection with HaCPV small polyhedral inclusion bodies (PIB) after 1 or 2 days which were observed in columnar cells of midgut. Virions were partially or completely occupied in a polyhedral matrix to form polyhedral inclusion bodies (PIB) at periphery of virogenic stroma. PIBs were measured 0.5 to 3.5 mm and virions about 46 nm in diameter. Microvilli of infected columnar cells were affected and degenerated immediately prior to rupture of the cell. Some infected columnar cells ruptured to release PIB into the gut lumen 3 days after infection. In addition,PIB were found in goblet cells, 5 or 6 days after infection. Infected goblet cells degenerate to such an extent that only a few of the original microvillus-like cytoplasmic projections and cell organells were left. These cytopathic effects caused in the midgut by HaCPV on cotton bollworm larvae are essentially similar to those have been reported for lepidoperan and dipteran infection by CPV.


Subject(s)
Animals , Lepidoptera/virology , Reoviridae/growth & development , Gastrointestinal Tract/pathology , Histocytochemistry , Larva/virology , Microscopy, Electron, Scanning , Microscopy, Electron, Transmission
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