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1.
J Cell Sci ; 129(15): 2905-11, 2016 08 01.
Article in English | MEDLINE | ID: mdl-27284005

ABSTRACT

The transport of macromolecules into the nucleus is mediated by soluble cellular receptors of the importin ß superfamily and requires the Ran-GTPase cycle. Several studies have provided evidence that there are exceptions to this canonical nuclear import pathway. Here, we report a new unconventional nuclear import mechanism exploited by the baculovirus Autographa californica multiple nucleopolyhedrovirus (AcMNPV). We found that AcMNPV nucleocapsids entered the nucleus of digitonin-permeabilized cells in the absence of exogenous cytosol or under conditions that blocked the Ran-GTPase cycle. AcMNPV contains a protein that activates the Arp2/3 complex and induces actin polymerization at one end of the rod-shaped nucleocapsid. We show that inhibitors of Arp2/3 blocked nuclear import of nucleocapsids in semi-permeabilized cells. Nuclear import of nucleocapsids was also reconstituted in purified nuclei supplemented with G-actin and Arp2/3 under actin polymerization conditions. Thus, we propose that actin polymerization drives not only migration of baculovirus through the cytoplasm but also pushes the nucleocapsid through the nuclear pore complex to enter the cell nucleus. Our findings point to a very distinct role of actin-based motility during the baculovirus infection cycle.


Subject(s)
Actins/metabolism , Baculoviridae/metabolism , Cell Nucleus/metabolism , Nucleocapsid/metabolism , Actin-Related Protein 2-3 Complex/metabolism , Active Transport, Cell Nucleus/drug effects , Baculoviridae/drug effects , Cell Membrane Permeability/drug effects , Cytosol/drug effects , Cytosol/metabolism , Digitonin/pharmacology , Guanosine 5'-O-(3-Thiotriphosphate)/metabolism , HeLa Cells , Humans , Nuclear Pore/metabolism , Nucleocapsid/drug effects , Nucleopolyhedroviruses/drug effects , Nucleopolyhedroviruses/metabolism , Polymerization/drug effects , Quinazolines/pharmacology , ran GTP-Binding Protein/metabolism
2.
Plant Cell ; 27(11): 3213-27, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26508763

ABSTRACT

Two LHC-like proteins, Photosystem II Subunit S (PSBS) and Light-Harvesting Complex Stress-Related (LHCSR), are essential for triggering excess energy dissipation in chloroplasts of vascular plants and green algae, respectively. The mechanism of quenching was studied in Physcomitrella patens, an early divergent streptophyta (including green algae and land plants) in which both proteins are active. PSBS was localized in grana together with photosystem II (PSII), but LHCSR was located mainly in stroma-exposed membranes together with photosystem I (PSI), and its distribution did not change upon high-light treatment. The quenched conformation can be preserved by rapidly freezing the high-light-treated tissues in liquid nitrogen. When using green fluorescent protein as an internal standard, 77K fluorescence emission spectra on isolated chloroplasts allowed for independent assessment of PSI and PSII fluorescence yield. Results showed that both photosystems underwent quenching upon high-light treatment in the wild type in contrast to mutants depleted of LHCSR, which lacked PSI quenching. Due to the contribution of LHCII, P. patens had a PSI antenna size twice as large with respect to higher plants. Thus, LHCII, which is highly abundant in stroma membranes, appears to be the target of quenching by LHCSR.


Subject(s)
Bryopsida/metabolism , Light-Harvesting Protein Complexes/metabolism , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Plant Proteins/metabolism , Stress, Physiological , Bryopsida/drug effects , Bryopsida/radiation effects , Bryopsida/ultrastructure , Catalysis/drug effects , Chlorophyll/metabolism , Chloroplasts/drug effects , Chloroplasts/metabolism , Chloroplasts/ultrastructure , Digitonin/pharmacology , Glucosides/pharmacology , Light , Membrane Microdomains/drug effects , Membrane Microdomains/metabolism , Membrane Microdomains/radiation effects , Photochemical Processes/drug effects , Spectrometry, Fluorescence , Stress, Physiological/drug effects , Stress, Physiological/radiation effects , Thermodynamics , Thylakoids/metabolism , Thylakoids/radiation effects , Thylakoids/ultrastructure
3.
Parasitology ; 145(14): 1884-1889, 2018 12.
Article in English | MEDLINE | ID: mdl-29781423

ABSTRACT

This study assessed the anthelmintic activity of plant-derived compounds against gastrointestinal nematodes of goats using the egg hatch and larval motility assays. The compounds tested were saponins (digitonin and aescin) and their respective sapogenins (aglycones), hecogenin acetate and flavonoids (catechin, hesperidin, isocordoin and a mixture of isocordoin and cordoin). Additionally, cytotoxicity of active substances was analysed on Vero cell through 3-4,5-dimethylthiazol-2-yl,2,5diphenyltetrazolium bromide (MTT) and propidium iodide (PI) tests. Significant reduction on the egg hatching (P 90%). Nevertheless, higher cytotoxicity was observed in the MTT assay, with IC50 of 0.20 mg mL-1 (aescin) and 0.0074 mg mL-1 (digitonin). Aescin and digitonin have a pronounced in vitro anthelmintic effect and the glycone portion of these saponins plays an important role in this activity.


Subject(s)
Antinematodal Agents/pharmacology , Flavonoids/pharmacology , Goats/parasitology , Nematoda/drug effects , Oocytes/drug effects , Saponins/pharmacology , Animals , Cell Survival/drug effects , Chlorocebus aethiops , Digitonin/pharmacology , Gastrointestinal Tract/parasitology , Inhibitory Concentration 50 , Larva/drug effects , Spiro Compounds/pharmacology , Steroids/pharmacology , Vero Cells
4.
Biochim Biophys Acta ; 1858(1): 116-22, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26518518

ABSTRACT

Membranes prepared from rat brain were treated with increasing concentrations of cationic, neutral, anionic and zwitterionic surfactants. Potent inactivation of [(3)H]MK-801 binding to NMDA receptors (NRs) was provided by the cation cetyl pyridinium (IC50 25 µM) and the neutral digitonin (IC50 37 µM). A 2 h incubation of rat brain membranes at 24°C with 100 µM of the neutral Triton X-100 resulted in about 50% reversible inhibition (without inactivation). Reversible inhibition was also effected by the anion deoxycholate (IC50 700 µM), and by the zwitterions N-lauryl sulfobetaine (12-SB(±), 400 µM) and CHAPS (1.5 mM), with inactivation at higher concentrations. Keeping the NR cation channel in the closed state significantly protected against inactivation by cations and by 12-SB(±), but not by the other detergents. Inactivation depended differentially on the amount of the membranes, on the duration of the treatment, and on the temperature. Varying the amount of membranes by a factor 8 yielded for cetyl trimethylammonium (16-NMe3(+)) IC50s of inactivation from 10 to 80 µM, while for deoxycholate the IC50 of inactivation was 1.2 mM for all tissue quantities. Some compounds inactivated within a few min (16-NMe3(+), digitonin, CHAPS), while inactivation by others took at least half an hour (Triton X-100, deoxycholate, 12-SB(±)). These last 3 ones also exhibited the steepest temperature dependence. Knowledge about the influence of various parameters is helpful in selecting appropriate conditions allowing the treatment of brain membranes with amphiphiles without risking irreversible inactivation.


Subject(s)
Cell Membrane/drug effects , Detergents/chemistry , Dizocilpine Maleate/chemistry , Excitatory Amino Acid Antagonists/chemistry , Receptors, N-Methyl-D-Aspartate/chemistry , Animals , Cell Membrane/chemistry , Cerebral Cortex/chemistry , Cetrimonium , Cetrimonium Compounds/chemistry , Cetrimonium Compounds/pharmacology , Cholic Acids/chemistry , Cholic Acids/pharmacology , Deoxycholic Acid/chemistry , Deoxycholic Acid/pharmacology , Detergents/pharmacology , Digitonin/chemistry , Digitonin/pharmacology , Dizocilpine Maleate/pharmacology , Excitatory Amino Acid Antagonists/pharmacology , Hippocampus/chemistry , Male , Octoxynol/chemistry , Octoxynol/pharmacology , Quaternary Ammonium Compounds/chemistry , Quaternary Ammonium Compounds/pharmacology , Rats , Rats, Wistar , Receptors, N-Methyl-D-Aspartate/antagonists & inhibitors
5.
Biochim Biophys Acta Biomembr ; 1859(12): 2516-2525, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28947142

ABSTRACT

OSW-1 is a structurally unique steroidal saponin isolated from the bulbs of Ornithogalum saundersiae, and has exhibited highly potent and selective cytotoxicity in tumor cell lines. This study aimed to investigate the molecular mechanism for the membrane-permeabilizing activity of OSW-1 in comparison with those of other saponins by using various spectroscopic approaches. The membrane effects and hemolytic activity of OSW-1 were markedly enhanced in the presence of membrane cholesterol. Binding affinity measurements using fluorescent cholestatrienol and solid-state NMR spectroscopy of a 3-d-cholesterol probe suggested that OSW-1 interacts with membrane cholesterol without forming large aggregates while 3-O-glycosyl saponin, digitonin, forms cholesterol-containing aggregates. The results suggest that OSW-1/cholesterol interaction is likely to cause membrane permeabilization and pore formation without destroying the whole membrane integrity, which could partly be responsible for its highly potent cell toxicity.


Subject(s)
Cholestenones/pharmacology , Cholesterol/chemistry , Erythrocyte Membrane/drug effects , Membrane Lipids/chemistry , Ornithogalum/chemistry , Saponins/pharmacology , Antineoplastic Agents, Phytogenic , Biological Transport/drug effects , Cholestenones/chemistry , Cholestenones/isolation & purification , Digitonin/pharmacology , Dimyristoylphosphatidylcholine/chemistry , Erythrocyte Membrane/chemistry , Fluoresceins/chemistry , Glycyrrhizic Acid/pharmacology , Hemolysis/drug effects , Humans , Oleanolic Acid/analogs & derivatives , Oleanolic Acid/pharmacology , Phosphatidylcholines/chemistry , Saponins/chemistry , Saponins/isolation & purification , Unilamellar Liposomes/chemistry , beta-Cyclodextrins/pharmacology
6.
Biochim Biophys Acta ; 1848(10 Pt A): 2337-43, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26171817

ABSTRACT

Recently we found that cytoplasm of permeabilized mammalian cells behaves as a hydrogel displaying intrinsic osmosensitivity. This study examined the role of microfilaments and microtubules in the regulation of hydrogel osmosensitivity, volume-sensitive ion transporters, and their contribution to volume modulation of intact cells. We found that intact and digitonin-permeabilized A549 cells displayed similar rate of shrinkage triggered by hyperosmotic medium. It was significantly slowed-down in both cell preparations after disruption of actin microfilaments by cytochalasin B, suggesting that rapid water release by intact cytoplasmic hydrogel contributes to hyperosmotic shrinkage. In hyposmotic swelling experiments, disruption of microtubules by vinblastine attenuated the maximal amplitude of swelling in intact cells and completely abolished it in permeabilized cells. The swelling of intact cells also triggered ~10-fold elevation of furosemide-resistant (86)Rb+ (K+) permeability and the regulatory volume decrease (RVD), both of which were abolished by Ba2+. Interestingly, RVD and K+ permeability remained unaffected in cytocholasin/vinblastine treated cells demonstrating that cytoskeleton disruption has no direct impact on Ba2+-sensitive K+-channels involved in RVD. Our results show, for the first time, that the cytoskeleton network contributes directly to passive cell volume adjustments in anisosmotic media via the modulation of the water retained by the cytoplasmic hydrogel.


Subject(s)
Cell Membrane Permeability/drug effects , Cell Size/drug effects , Cytoskeleton/pathology , Digitonin/pharmacology , Lung Neoplasms/pathology , Lung Neoplasms/physiopathology , Cell Line, Tumor , Cytoskeleton/drug effects , Humans , Osmotic Pressure
7.
J Virol ; 89(20): 10442-52, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26246568

ABSTRACT

UNLABELLED: The human papillomavirus (HPV) capsid is composed of the major capsid protein L1 and the minor capsid protein L2. During entry, the HPV capsid undergoes numerous conformational changes that result in endosomal uptake and subsequent trafficking of the L2 protein in complex with the viral DNA to the trans-Golgi network. To facilitate this transport, the L2 protein harbors a number of putative motifs that, if capable of direct interaction, would interact with cytosolic host cell factors. These data imply that a portion of L2 becomes cytosolic during infection. Using a low concentration of digitonin to selectively permeabilize the plasma membrane of infected cells, we mapped the topography of the L2 protein during infection. We observed that epitopes within amino acid residues 64 to 81 and 163 to 170 and a C-terminal tag of HPV16 L2 are exposed on the cytosolic side of intracellular membranes, whereas an epitope within residues 20 to 38, which are upstream of a putative transmembrane region, is luminal. Corroborating these findings, we also found that L2 protein is sensitive to trypsin digestion during infection. These data demonstrate that the majority of the L2 protein becomes accessible on the cytosolic side of intracellular membranes in order to interact with cytosolic factors to facilitate vesicular trafficking. IMPORTANCE: In order to complete infectious entry, nonenveloped viruses have to pass cellular membranes. This is often achieved through the viral capsid protein associating with or integrating into intracellular membrane. Here, we determine the topography of HPV L2 protein in the endocytic vesicular compartment, suggesting that L2 becomes a transmembrane protein with a short luminal portion and with the majority facing the cytosolic side for interaction with host cell transport factors.


Subject(s)
Capsid Proteins/chemistry , Capsid/chemistry , Human papillomavirus 16/chemistry , Keratinocytes/virology , Oncogene Proteins, Viral/chemistry , Virus Internalization , Capsid/metabolism , Capsid Proteins/metabolism , Cell Line, Transformed , Cell Membrane Permeability/drug effects , Digitonin/pharmacology , Endosomes/chemistry , Endosomes/metabolism , Endosomes/virology , HEK293 Cells , HeLa Cells , Host-Pathogen Interactions , Human papillomavirus 16/metabolism , Human papillomavirus 18/chemistry , Human papillomavirus 18/metabolism , Humans , Intracellular Membranes/chemistry , Intracellular Membranes/metabolism , Intracellular Membranes/virology , Keratinocytes/drug effects , Keratinocytes/metabolism , Oncogene Proteins, Viral/metabolism , Protein Interaction Domains and Motifs , Protein Transport , Proteolysis , Trypsin/chemistry , Virion/chemistry , Virion/metabolism
8.
Exp Parasitol ; 165: 7-15, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26968775

ABSTRACT

Trypanosoma evansi is a monomorphic protist that can infect horses and other animal species of economic importance for man. Like the bloodstream form of the closely related species Trypanosoma brucei, T. evansi depends exclusively on glycolysis for its free-energy generation. In T. evansi as in other kinetoplastid organisms, the enzymes of the major part of the glycolytic pathway are present within organelles called glycosomes, which are authentic but specialized peroxisomes. Since T. evansi does not undergo stage-dependent differentiations, it occurs only as bloodstream forms, it has been assumed that the metabolic pattern of this parasite is identical to that of the bloodstream form of T. brucei. However, we report here the presence of two additional enzymes, phosphoenolpyruvate carboxykinase and PPi-dependent pyruvate phosphate dikinase in T. evansi glycosomes. Their colocalization with glycolytic enzymes within the glycosomes of this parasite has not been reported before. Both enzymes can make use of PEP for contributing to the production of ATP within the organelles. The activity of these enzymes in T. evansi glycosomes drastically changes the model assumed for the oxidation of glucose by this parasite.


Subject(s)
Phosphoenolpyruvate Carboxykinase (ATP)/metabolism , Pyruvate, Orthophosphate Dikinase/metabolism , Trypanosoma/enzymology , Animals , Digitonin/pharmacology , Glucosephosphate Dehydrogenase/isolation & purification , Glucosephosphate Dehydrogenase/metabolism , Glycolysis , Hexokinase/isolation & purification , Hexokinase/metabolism , Horses , Indicators and Reagents/pharmacology , Malate Dehydrogenase/isolation & purification , Malate Dehydrogenase/metabolism , Mice , Microbodies/enzymology , Microscopy, Fluorescence , Permeability/drug effects , Phosphoenolpyruvate Carboxykinase (ATP)/genetics , Phosphoenolpyruvate Carboxykinase (ATP)/isolation & purification , Phosphoglycerate Kinase/isolation & purification , Phosphoglycerate Kinase/metabolism , Phosphopyruvate Hydratase/isolation & purification , Phosphopyruvate Hydratase/metabolism , Pyruvate, Orthophosphate Dikinase/isolation & purification , Rabbits , Rats , Rats, Wistar , Trypanosoma/drug effects
9.
Antimicrob Agents Chemother ; 59(11): 7011-7, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26349826

ABSTRACT

The flagellate Trypanosoma brucei causes sleeping sickness in humans and nagana in animals. Only a few drugs are registered to treat trypanosomiasis, but those drugs show severe side effects. Also, because some pathogen strains have become resistant, new strategies are urgently needed to combat this parasitic disease. An underexplored possibility is the application of combinations of several trypanocidal agents, which may potentiate their trypanocidal activity in a synergistic fashion. In this study, the potential synergism of mutual combinations of bioactive alkaloids and alkaloids with a membrane-active steroidal saponin, digitonin, was explored with regard to their effect on T. b. brucei. Alkaloids were selected that affect different molecular targets: berberine and chelerythrine (intercalation of DNA), piperine (induction of apoptosis), vinblastine (inhibition of microtubule assembly), emetine (intercalation of DNA, inhibition of protein biosynthesis), homoharringtonine (inhibition of protein biosynthesis), and digitonin (membrane permeabilization and uptake facilitation of polar compounds). Most combinations resulted in an enhanced trypanocidal effect. The addition of digitonin significantly stimulated the activity of almost all alkaloids against trypanosomes. The strongest effect was measured in a combination of digitonin with vinblastine. The highest dose reduction indexes (DRI) were measured in the two-drug combination of digitonin or piperine with vinblastine, where the dose of vinblastine could be reduced 9.07-fold or 7.05-fold, respectively. The synergistic effects of mutual combinations of alkaloids and of alkaloids with digitonin present a new avenue to treat trypanosomiasis but one which needs to be corroborated in future animal experiments.


Subject(s)
Alkaloids/pharmacology , Trypanocidal Agents/pharmacology , Trypanosoma brucei brucei/drug effects , Animals , Benzodioxoles/pharmacology , Benzophenanthridines/pharmacology , Berberine/pharmacology , Digitonin/pharmacology , Drug Combinations , Drug Synergism , Emetine/pharmacology , Harringtonines/pharmacology , Homoharringtonine , Models, Theoretical , Piperidines/pharmacology , Polyunsaturated Alkamides/pharmacology , Vinblastine/pharmacology
10.
PLoS Biol ; 10(5): e1001336, 2012.
Article in English | MEDLINE | ID: mdl-22679391

ABSTRACT

In metazoans, the majority of mRNAs coding for secreted and membrane-bound proteins are translated on the surface of the endoplasmic reticulum (ER). Although the targeting of these transcripts to the surface of the ER can be mediated by the translation of a signal sequence and their maintenance is mediated by interactions between the ribosome and the translocon, it is becoming increasingly clear that additional ER-localization pathways exist. Here we demonstrate that many of these mRNAs can be targeted to, and remain associated with, the ER independently of ribosomes and translation. Using a mass spectrometry analysis of proteins that associate with ER-bound polysomes, we identified putative mRNA receptors that may mediate this alternative mechanism, including p180, an abundant, positively charged membrane-bound protein. We demonstrate that p180 over-expression can enhance the association of generic mRNAs with the ER. We then show that p180 contains a lysine-rich region that can directly interact with RNA in vitro. Finally, we demonstrate that p180 is required for the efficient ER-anchoring of bulk poly(A) and of certain transcripts, such as placental alkaline phosphatase and calreticulin, to the ER. In summary, we provide, to our knowledge, the first mechanistic details for an alternative pathway to target and maintain mRNA at the ER. It is likely that this alternative pathway not only enhances the fidelity of protein sorting, but also localizes mRNAs to various subdomains of the ER and thus contributes to cellular organization.


Subject(s)
Endoplasmic Reticulum/metabolism , RNA, Messenger/metabolism , Receptors, Cytoplasmic and Nuclear/metabolism , Ribosomes/metabolism , Active Transport, Cell Nucleus , Alkaline Phosphatase/genetics , Alkaline Phosphatase/metabolism , Animals , Base Sequence , COS Cells , Calreticulin/genetics , Calreticulin/metabolism , Cell Size , Chlorocebus aethiops , Cloning, Molecular , Digitonin/pharmacology , Endoplasmic Reticulum/genetics , Escherichia coli/genetics , Escherichia coli/metabolism , GPI-Linked Proteins/genetics , GPI-Linked Proteins/metabolism , Green Fluorescent Proteins/metabolism , HEK293 Cells , Humans , In Situ Hybridization, Fluorescence , Insulin/genetics , Insulin/metabolism , Isoenzymes/genetics , Isoenzymes/metabolism , Lentivirus/genetics , Lentivirus/metabolism , Lysine/metabolism , Molecular Sequence Data , Plasmids/genetics , Plasmids/metabolism , Protein Interaction Mapping , Protein Transport , Proteins/genetics , Proteins/metabolism , RNA, Messenger/genetics , Receptors, Cytoplasmic and Nuclear/genetics
11.
Molecules ; 20(11): 20146-60, 2015 Nov 09.
Article in English | MEDLINE | ID: mdl-26569199

ABSTRACT

In the present investigation we studied the molecular mechanisms of the monodesmosidic saponin digitonin on natural and artificial membranes. We measured the hemolytic activity of digitonin on red blood cells (RBCs). Also different lipid membrane models (large unilamellar vesicles, LUVs, and giant unilamellar vesicles, GUVs) in the presence and absence of cholesterol were employed. The stability and permeability of the different vesicle systems were studied by using calcein release assay, GUVs membrane permeability assay using confocal microscopy (CM) and fluorescence correlation spectroscopy (FCS) and vesicle size measurement by dynamic light scattering (DLS). The results support the essential role of cholesterol in explaining how digitonin can disintegrate biological and artificial membranes. Digitonin induces membrane permeability or causes membrane rupturing only in the presence of cholesterol in an all-or-none mechanism. This effect depends on the concentrations of both digitonin and cholesterol. At low concentrations, digitonin induces membrane permeability while keeping the membrane intact. When digitonin is combined with other drugs, a synergistic potentiation can be observed because it facilitates their uptake.


Subject(s)
Cell Membrane/chemistry , Cholesterol/chemistry , Digitonin/chemistry , Saponins/chemistry , Steroids/chemistry , Animals , Cell Membrane Permeability/drug effects , Cholesterol/metabolism , Digitonin/pharmacology , Erythrocytes/drug effects , Fluoresceins/metabolism , Hemolysis/drug effects , Lipid Bilayers/chemistry , Sheep
12.
Prikl Biokhim Mikrobiol ; 51(2): 258-67, 2015.
Article in Russian | MEDLINE | ID: mdl-26027363

ABSTRACT

We investigated the efficiency of increasing the permeability (permeabilization) of cell membranes in primary liver cells by Bacillus cereus hemolysin II. An assessment of the degree of permeabilization was car ried out by measuring the fluorescence intensity of various low molecular weight dyes, which enter through pores into hepatocyte cells cultivated with hemolysin. We uncovered a high efficacy of hemolysin HlyII action on hepatocyte cell walls, which exceeded the effect of nonionic detergent, digitonin, which is commonly employed for pore formation in various cell membranes. Our results also point to the reversibility of membrane permeabilization in primary hepatocytes. The data obtained in this study can be utilized for assessments of pore-forming activity, in studies of hepatic mechanisms of action, and also the determination of the liver toxicity for different low molecular weight drugs.


Subject(s)
Bacillus cereus/chemistry , Bacterial Proteins/pharmacology , Hemolysin Proteins/pharmacology , Hepatocytes/drug effects , Cell Membrane/drug effects , Cell Membrane Permeability/drug effects , Cell Wall/drug effects , Cells, Cultured , Digitonin/pharmacology , Humans
13.
Biochim Biophys Acta ; 1834(7): 1359-63, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23410952

ABSTRACT

The development of a fluorescent assay to detect activity of the mitochondrial cAMP-dependent protein kinase (PKA) is described. A peptide-based sensor was utilized to quantify the relative amount of PKA activity present in each compartment of the mitochondria (the outer membrane, the intermembrane space, and the matrix). In the process of validating this assay, we discovered that PKA activity is regulated by the protease calpain. Upon exposure of bovine heart mitochondria to digitonin, Ca(2+), and a variety of electron transport chain inhibitors, the regulatory subunits of the PKA holoenzyme (R2C2) are digested, releasing active catalytic subunits. This proteolysis is attenuated by calpain inhibitor I (ALLN). This article is part of a Special Issue entitled: Inhibitors of Protein Kinases (2012).


Subject(s)
Cyclic AMP-Dependent Protein Kinases/metabolism , Cyclic AMP/metabolism , Fluorescent Dyes/metabolism , Mitochondria, Heart/enzymology , Animals , Biosensing Techniques/methods , Blotting, Western , Calcium/metabolism , Calcium/pharmacology , Calpain/metabolism , Catalytic Domain , Cattle , Cyclic AMP/pharmacology , Cyclic AMP-Dependent Protein Kinases/chemistry , Digitonin/metabolism , Digitonin/pharmacology , Fluorescent Dyes/chemistry , Holoenzymes/chemistry , Holoenzymes/metabolism , Kinetics , Models, Molecular , Molecular Structure , Peptides/chemistry , Peptides/metabolism , Phosphorylation/drug effects , Protein Binding , Protein Structure, Tertiary , Proteolysis/drug effects
14.
Biochem Biophys Res Commun ; 443(3): 997-1002, 2014 Jan 17.
Article in English | MEDLINE | ID: mdl-24361883

ABSTRACT

Bcs1 is a transmembrane chaperone in the mitochondrial inner membrane, and is required for the mitochondrial Respiratory Chain Complex III assembly. It has been shown that the highly-conserved C-terminal region of Bcs1 including the AAA ATPase domain in the matrix side is essential for the chaperone function. Here we describe the importance of the N-terminal short segment located in the intermembrane space in the Bcs1 function. Among the N-terminal 44 amino acid residues of yeast Bcs1, the first 37 residues are dispensable whereas a hydrophobic amino acid in the residue 38 is essential for integration of Rieske Iron-sulfur Protein into the premature Complex III from the mitochondrial matrix. Substitution of the residue 38 by a hydrophilic amino acid residue affects conformation of Bcs1 and interactions with other proteins. The evolutionarily-conserved short α helix of Bcs1 in the intermembrane space is an essential element for the chaperone function.


Subject(s)
Electron Transport Complex III/metabolism , Membrane Proteins/chemistry , Membrane Proteins/metabolism , Mitochondria/metabolism , Mitochondrial Proteins/chemistry , Mitochondrial Proteins/metabolism , Molecular Chaperones/chemistry , Molecular Chaperones/metabolism , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/metabolism , ATPases Associated with Diverse Cellular Activities , Amino Acid Sequence , Amino Acid Substitution , Cross-Linking Reagents/pharmacology , Digitonin/pharmacology , Electrophoresis, Polyacrylamide Gel , Leucine/genetics , Mitochondria/drug effects , Mitochondrial Membranes/drug effects , Mitochondrial Membranes/metabolism , Molecular Sequence Data , Mutation/genetics , Nuclear Pore Complex Proteins/chemistry , Nuclear Pore Complex Proteins/metabolism , Protein Structure, Secondary , Saccharomyces cerevisiae/drug effects
15.
Methods ; 61(2): 156-64, 2013 Jun 01.
Article in English | MEDLINE | ID: mdl-23607990

ABSTRACT

Rapid analysis of a cell's propensity to undergo apoptosis through the mitochondrial pathway is hindered by the complex network of interactions between more than fifteen known members of the BCL2 family that govern the decision to undergo mitochondrial apoptosis, and measurement of protein levels alone fails to account for critical interactions between the proteins. To address this issue, we have developed two functional assays for same-day analysis of cell lines or primary tissue samples. Using defined inputs in the form of peptides derived primarily from the BH3 domains of pro-apoptotic members of the BCL2 family, we invoke a response in the mitochondria in the form of mitochondrial outer membrane permeabilization measured indirectly using potential sensitive dyes. BH3 profiling can be applied to any viable single cell suspension and provides a response from the sum total of all known and unknown interactions within the BCL2 family for each stimulus, and the pattern of response can provide both a cell's propensity towards mitochondrial apoptosis, or 'priming', as well as indicate dependencies on specific anti-apoptotic proteins. Described here are optimized conditions for both plate-based and FACS-based BH3 profiling for homogeneous and heterogeneous samples.


Subject(s)
Apoptosis , Mitochondria/metabolism , Mitochondrial Membranes/metabolism , Peptide Fragments/pharmacology , Proto-Oncogene Proteins c-bcl-2/metabolism , Proto-Oncogene Proteins/pharmacology , Cell Line, Tumor , Digitonin/pharmacology , Flow Cytometry , Fluorescent Dyes , Fluorometry , Gene Expression Regulation , Humans , Membrane Potential, Mitochondrial/drug effects , Mitochondria/drug effects , Mitochondria/pathology , Mitochondrial Membranes/drug effects , Mitochondrial Membranes/pathology , Peptide Fragments/chemistry , Permeability , Proto-Oncogene Proteins/chemistry , Proto-Oncogene Proteins c-bcl-2/genetics
16.
J Biol Chem ; 287(20): 16869-79, 2012 May 11.
Article in English | MEDLINE | ID: mdl-22451678

ABSTRACT

Nuclear localization of multiple receptor-tyrosine kinases (RTKs), such as EGF receptor (EGFR), ErbB-2, FGF receptor (FGFR), and many others, has been reported by several groups. We previously showed that cell surface EGFR is trafficked to the nucleus through a retrograde pathway from the Golgi to the endoplasmic reticulum (ER) and that EGFR is then translocated to the inner nuclear membrane (INM) through the INTERNET (integral trafficking from the ER to the nuclear envelope transport) pathway. However, the nuclear trafficking mechanisms of other membrane RTKs, apart from EGFR, remain unclear. The purpose of this study was to compare the nuclear transport of EGFR family proteins with that of FGFR-1. Interestingly, we found that digitonin permeabilization, which selectively releases soluble nuclear transporters from the cytoplasm and has been shown to inhibit nuclear transport of FGFR-1, had no effects on EGFR nuclear transport, raising the possibility that EGFR and FGFR-1 use different pathways to be translocated into the nucleus. Using the subnuclear fractionation assay, we further demonstrated that biotinylated cell surface ErbB-2, but not FGFR-1, is targeted to the INM, associating with Sec61ß in the INM, similar to the nuclear trafficking of EGFR. Thus, ErbB-2, but not FGFR-1, shows a similar trafficking pathway to EGFR for translocation to the nucleus, indicating that at least two different pathways of nuclear transport exist for cell surface receptors. This finding provides a new direction for investigating the trafficking mechanisms of various nuclear RTKs.


Subject(s)
Cell Membrane/metabolism , ErbB Receptors/metabolism , Nuclear Envelope/metabolism , Receptor, ErbB-2/metabolism , 3T3 Cells , Active Transport, Cell Nucleus/drug effects , Active Transport, Cell Nucleus/physiology , Animals , Cell Line, Tumor , Cell Membrane/genetics , Cell Membrane Permeability/drug effects , Digitonin/pharmacology , ErbB Receptors/genetics , Humans , Indicators and Reagents/pharmacology , Mice , Nuclear Envelope/genetics , Receptor, ErbB-2/genetics
17.
Biochim Biophys Acta ; 1817(10): 1901-6, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22398128

ABSTRACT

Brain mitochondria are not only major producers of reactive oxygen species but they also considerably contribute to the removal of toxic hydrogen peroxide by the glutathione (GSH) and thioredoxin-2 (Trx2) antioxidant systems. In this work we estimated the relative contribution of both systems and catalase to the removal of intrinsically produced hydrogen peroxide (H(2)O(2)) by rat brain mitochondria. By using the specific inhibitors auranofin and 1-chloro-2,4-dinitrobenzene (DNCB), the contribution of Trx2- and GSH-systems to reactive oxygen species (ROS) detoxification in rat brain mitochondria was determined to be 60±20% and 20±15%, respectively. Catalase contributed to a non-significant extent only, as revealed by aminotriazole inhibition. In digitonin-treated rat hippocampal homogenates inhibition of Trx2- and GSH-systems affected mitochondrial hydrogen peroxide production rates to a much higher extent than the endogenous extramitochondrial hydrogen peroxide production, pointing to a strong compartmentation of ROS metabolism. Imaging experiments of hippocampal slice cultures showed on single cell level substantial heterogeneity of hydrogen peroxide detoxification reactions. The strongest effects of inhibition of hydrogen peroxide removal by auranofin or DNCB were detected in putative interneurons and microglial cells, while pyramidal cells and astrocytes showed lower effects. Thus, our data underline the important contribution of the Trx2-system to hydrogen peroxide detoxification in rat hippocampus. This article is part of a Special Issue entitled: 17th European Bioenergetics Conference (EBEC 2012).


Subject(s)
Glutathione Peroxidase/metabolism , Hippocampus/enzymology , Hydrogen Peroxide/metabolism , Mitochondria/enzymology , Mitochondrial Proteins/metabolism , Nerve Tissue Proteins/metabolism , Thioredoxin-Disulfide Reductase/metabolism , Animals , Antirheumatic Agents/pharmacology , Astrocytes/cytology , Astrocytes/metabolism , Auranofin/pharmacology , Catalase/metabolism , Digitonin/pharmacology , Dinitrochlorobenzene/pharmacology , Glutathione/metabolism , Indicators and Reagents/pharmacology , Male , Microglia/cytology , Microglia/metabolism , Rats , Rats, Wistar , Thioredoxins/metabolism
19.
Methods Mol Biol ; 2557: 53-60, 2023.
Article in English | MEDLINE | ID: mdl-36512209

ABSTRACT

The protozoan parasite, Trypanosoma brucei, offers a simple system to study the growth and duplication of the Golgi. Cell lines stably expressing a photoactivatable GFP attached to an endogenous Golgi protein are permeabilized using digitonin. Photoactivation followed by imaging can then be used to follow the formation of the new Golgi.


Subject(s)
Parasites , Trypanosoma brucei brucei , Animals , Trypanosoma brucei brucei/metabolism , Golgi Apparatus/metabolism , Digitonin/pharmacology , Digitonin/metabolism , Parasites/metabolism , Protozoan Proteins/metabolism
20.
J Biol Chem ; 286(2): 1046-53, 2011 Jan 14.
Article in English | MEDLINE | ID: mdl-21062740

ABSTRACT

We studied the properties of the permeability transition pore (PTP) in rat liver mitochondria and in mitoplasts retaining inner membrane ultrastructure and energy-linked functions. Like mitochondria, mitoplasts readily underwent a permeability transition following Ca(2+) uptake in a process that maintained sensitivity to cyclosporin A. On the other hand, major differences between mitochondria and mitoplasts emerged in PTP regulation by ligands of the outer membrane translocator protein of 18 kDa, TSPO, formerly known as the peripheral benzodiazepine receptor. Indeed, (i) in mitoplasts, the PTP could not be activated by photo-oxidation after treatment with dicarboxylic porphyrins endowed with protoporphyrin IX configuration, which bind TSPO in intact mitochondria; and (ii) mitoplasts became resistant to the PTP-inducing effects of N,N-dihexyl-2-(4-fluorophenyl)indole-3-acetamide and of other selective ligands of TSPO. Thus, the permeability transition is an inner membrane event that is regulated by the outer membrane through specific interactions with TSPO.


Subject(s)
Calcium/metabolism , Carrier Proteins/metabolism , Mitochondria, Liver/metabolism , Mitochondrial Membranes/metabolism , Porphyrins/pharmacokinetics , Receptors, GABA-A/metabolism , Animals , Cell Membrane Permeability/drug effects , Cell Membrane Permeability/physiology , Digitonin/pharmacology , Membrane Potential, Mitochondrial/physiology , Mitochondria, Liver/drug effects , Mitochondrial Membranes/drug effects , Oxidation-Reduction , Photochemical Processes , Porphyrins/chemistry , Rats , Rats, Wistar
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