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1.
Article in Russian | MEDLINE | ID: mdl-25051696

ABSTRACT

AIM: VNTR-typing of Vibrio cholerae strains isolated in the territory of Russian Federation in 2012. MATERIALS AND METHODS: 71 Vibrio cholerae O3 and 3 V cholerae O1/O139 strains were used in the study. Genotyping was performed by using PCR for 5 VNTR-loci. RESULTS: Multilocus VNTR-typing allowed to group the strains into 31 VNTR-genotypes. Genotypes were divided among 10 discrete clusters by results of a cluster analysis. The presence of tcpA gene is clearly linked with the presence of VcB locus. Each geographic region was characterized by their own VNTR-genotypes. CONCLUSION: In the course of the carried out VNTR-genotyping of V. cholerae isolated in 2012, 2 types of vibrio population formation were detected. A geographic attachment to specific regions was characteristic for most of the genotypes.


Subject(s)
Fimbriae Proteins/genetics , Minisatellite Repeats , Phylogeny , Vibrio cholerae/genetics , Cholera/epidemiology , Cholera/microbiology , Culture Media , Fimbriae Proteins/classification , Gene Expression , Genetic Loci , Genotype , Humans , Multilocus Sequence Typing/methods , Phylogeography , Polymerase Chain Reaction , Russia/epidemiology , Vibrio cholerae/classification , Vibrio cholerae/isolation & purification
2.
Article in Russian | MEDLINE | ID: mdl-25051705

ABSTRACT

AIM: Conduction of a comparative proteomic mass-spectrometric (MS) analysis using a personal database of V. cholerae protein mass-spectra and genetic VNTR-typing of cholera causative agent strains. MATERIALS AND METHODS: V. cholerae O1 El Tor strains - 7, V. cholerae non O1/non O139 - 2. Protein profiling and VNTR-genotyping of strains was carried out on MALDI TOF-MS Autoflex (Bruker Daltonics) mass-spectrometer and SIS Cholera-strains-VNTR. RESULTS: The established community of a proteomic profile of epidemic cholera vibrio strains isolated in 2010 - 2012 in Moscow allowed to determine Indian origin of a toxigenic strain isolated in Taganrog in 2011. M/z proteins distinguishing V. cholerae O1 and non O1/non O139 strains were identified. Proteomic analysis confirms the results of VNTR-genotyping. CONCLUSION: Study and typing of V. cholerae members with determination of their origin and phylogenetic relationship is possible using a collection of V. cholerae mass-spectra.


Subject(s)
Fimbriae Proteins/genetics , Minisatellite Repeats , Phylogeny , Proteomics , Vibrio cholerae/genetics , Cholera/epidemiology , Cholera/microbiology , Culture Media , Fimbriae Proteins/classification , Gene Expression , Genetic Loci , Genotype , Humans , Multilocus Sequence Typing/methods , Phylogeography , Polymerase Chain Reaction , Russia/epidemiology , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Vibrio cholerae/classification , Vibrio cholerae/isolation & purification
3.
Antimicrob Agents Chemother ; 57(1): 490-7, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23147723

ABSTRACT

Multidrug-resistant Escherichia coli strains belonging to a single lineage frequently account for a large proportion of extraintestinal E. coli infections in many parts of the world. However, limited information exists on the community prevalence and clonal composition of drug-susceptible E. coli strains. Between July 2007 and September 2010, we analyzed all consecutively collected Gram-negative bacterial isolates from patients with bloodstream infection (BSI) admitted to a public hospital in San Francisco for drug susceptibility and associated drug resistance genes. The E. coli isolates were genotyped for fimH single nucleotide polymorphisms (SNPs) and multilocus sequence types (MLSTs). Among 539 isolates, E. coli accounted for 249 (46%); 74 (30%) of them were susceptible to all tested drugs, and 129 (52%) were multidrug resistant (MDR). Only five MLST genotypes accounted for two-thirds of the E. coli isolates; the most common were ST131 (23%) and ST95 (18%). Forty-seven (92%) of 51 ST131 isolates, as opposed to only 8 (20%) of 40 ST95 isolates, were MDR (P < 0.0001). The Simpson's diversity index for drug-susceptible ST genotypes was 87%, while the index for MDR ST genotypes was 81%. ST95 strains were comprised of four fimH types, and one of these (f-6) accounted for 67% of the 21 susceptible isolates (P < 0.003). A large proportion (>70%) of both MDR and susceptible E. coli BSI isolates represented community-onset infections. These observations show that factors other than the selective pressures of antimicrobial agents used in hospitals contribute to community-onset extraintestinal infections caused by clonal groups of E. coli regardless of their drug resistance.


Subject(s)
Adhesins, Escherichia coli/genetics , Anti-Bacterial Agents/pharmacology , Bacteremia/drug therapy , Community-Acquired Infections/drug therapy , Escherichia coli Infections/drug therapy , Escherichia coli/drug effects , Escherichia coli/genetics , Fimbriae Proteins/genetics , Adhesins, Escherichia coli/classification , Bacteremia/microbiology , Clone Cells , Community-Acquired Infections/microbiology , Drug Resistance, Bacterial/genetics , Escherichia coli/classification , Escherichia coli/isolation & purification , Escherichia coli Infections/microbiology , Fimbriae Proteins/classification , Humans , Microbial Sensitivity Tests , Multilocus Sequence Typing , Polymorphism, Single Nucleotide
4.
J Bacteriol ; 194(10): 2725-35, 2012 May.
Article in English | MEDLINE | ID: mdl-22447901

ABSTRACT

The type IV pili are helical filaments found on many Gram-negative pathogenic bacteria, with multiple diverse roles in pathogenesis, including microcolony formation, adhesion, and twitching motility. Many pathogenic enterotoxigenic Escherichia coli (ETEC) isolates express one of two type IV pili belonging to the type IVb subclass: CFA/III or Longus. Here we show a direct correlation between CFA/III expression and ETEC aggregation, suggesting that these pili, like the Vibrio cholerae toxin-coregulated pili (TCP), mediate microcolony formation. We report a 1.26-Å resolution crystal structure of CofA, the major pilin subunit from CFA/III. CofA is very similar in structure to V. cholerae TcpA but possesses a 10-amino-acid insertion that replaces part of the α2-helix with an irregular loop containing a 3(10)-helix. Homology modeling suggests a very similar structure for the Longus LngA pilin. A model for the CFA/III pilus filament was generated using the TCP electron microscopy reconstruction as a template. The unique 3(10)-helix insert fits perfectly within the gap between CofA globular domains. This insert, together with differences in surface-exposed residues, produces a filament that is smoother and more negatively charged than TCP. To explore the specificity of the type IV pilus assembly apparatus, CofA was expressed heterologously in V. cholerae by replacing the tcpA gene with that of cofA within the tcp operon. Although CofA was synthesized and processed by V. cholerae, no CFA/III filaments were detected, suggesting that the components of the type IVb pilus assembly system are highly specific to their pilin substrates.


Subject(s)
Enterotoxigenic Escherichia coli/metabolism , Fimbriae Proteins/classification , Fimbriae Proteins/metabolism , Gene Expression Regulation, Bacterial/physiology , Amino Acid Sequence , Enterotoxigenic Escherichia coli/genetics , Fimbriae Proteins/genetics , Models, Molecular , Molecular Sequence Data , Protein Conformation , Protein Folding , Protein Subunits , Vibrio cholerae
5.
Acta Crystallogr D Biol Crystallogr ; 68(Pt 10): 1418-29, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22993096

ABSTRACT

CofA, a major pilin subunit of colonization factor antigen III (CFA/III), forms pili that mediate small-intestinal colonization by enterotoxigenic Escherichia coli (ETEC). In this study, the crystal structure of an N-terminally truncated version of CofA was determined by single-wavelength anomalous diffraction (SAD) phasing using five sulfurs in the protein. Given the counterbalance between anomalous signal strength and the undesired X-ray absorption of the solvent, diffraction data were collected at 1.5 Å resolution using synchrotron radiation. These data were sufficient to elucidate the sulfur substructure at 1.38 Å resolution. The low solvent content (29%) of the crystal necessitated that density modification be performed with an additional 0.9 Å resolution data set to reduce the phase error caused by the small sulfur anomalous signal. The CofA structure showed the αß-fold typical of type IVb pilins and showed high structural homology to that of TcpA for toxin-coregulated pili of Vibrio cholerae, including spatial distribution of key residues critical for pilin self-assembly. A pilus-filament model of CofA was built by computational docking and molecular-dynamics simulation using the previously reported filament model of TcpA as a structural template. This model revealed that the CofA filament surface was highly negatively charged and that a 23-residue-long loop between the α1 and α2 helices filled the gap between the pilin subunits. These characteristics could provide a unique binding epitope for the CFA/III pili of ETEC compared with other type IVb pili.


Subject(s)
Enterotoxigenic Escherichia coli/chemistry , Escherichia coli Proteins/chemistry , Fimbriae Proteins/chemistry , Fimbriae, Bacterial/chemistry , Sulfur/chemistry , Crystallography, X-Ray , Fimbriae Proteins/classification , Humans , Protein Subunits/chemistry , Sequence Homology, Amino Acid
6.
PLoS One ; 16(7): e0255111, 2021.
Article in English | MEDLINE | ID: mdl-34310632

ABSTRACT

Porphyromonas gingivalis, a gram-negative anaerobic bacterium, is associated with the development of periodontal disease. The genetic diversity in virulence factors, such as adhesive fimbriae, among its strains affects the bacterial pathogenicity. P. gingivalis generally expresses two distinct types of fimbriae, FimA and Mfa1. Although the genetic diversity of fimA, encoding the major FimA fimbrilin protein, has been characterized, the genes encoding the Mfa1 fimbrial components, including the Mfa1 to Mfa5 proteins, have not been fully studied. We, therefore, analyzed their genotypes in 12 uncharacterized and 62 known strains of P. gingivalis (74 strains in total). The mfa1 genotype was primarily classified into two genotypes, 53 and 70. Additionally, we found that genotype 70 could be further divided into two subtypes (70A and 70B). The diversity of mfa2 to mfa4 was consistent with the mfa1 genotype, although no subtype in genotype 70 was observed. Protein structure modeling showed high homology between the genotypes in Mfa1 to Mfa4. The mfa5 gene was classified into five genotypes (A to E) independent of other genotypes. Moreover, genotype A was further divided into two subtypes (A1 and A2). Surprisingly, some strains had two mfa5 genes, and the 2nd mfa5 exclusively occurred in genotype E. The Mfa5 protein in all genotypes showed a homologous C-terminal half, including the conserved C-terminal domain recognized by the type IX secretion system. Furthermore, the von Willebrand factor domain at the N-terminal was detected only in genotypes A to C. The mfa1 genotypes partially correlated with the ragA and ragB genotypes (located immediately downstream of the mfa gene cluster) but not with the fimA genotypes.


Subject(s)
Bacterial Proteins/genetics , Fimbriae Proteins/genetics , Porphyromonas gingivalis/genetics , Bacterial Proteins/classification , Bacterial Proteins/metabolism , Fimbriae Proteins/classification , Fimbriae Proteins/metabolism , Fimbriae, Bacterial/genetics , Genetic Variation , Genotype , High-Throughput Nucleotide Sequencing , Multigene Family , Phylogeny , Protein Isoforms/classification , Protein Isoforms/genetics , Protein Isoforms/metabolism , Protein Structure, Tertiary , Sequence Analysis, DNA , Virulence Factors/genetics , Virulence Factors/metabolism
7.
BMC Microbiol ; 10: 183, 2010 Jun 24.
Article in English | MEDLINE | ID: mdl-20576143

ABSTRACT

BACKGROUND: Catheter-associated urinary tract infection (CAUTI) is the most common nosocomial infection in the United States and is caused by a range of uropathogens. Biofilm formation by uropathogens that cause CAUTI is often mediated by cell surface structures such as fimbriae. In this study, we characterised the genes encoding type 3 fimbriae from CAUTI strains of Escherichia coli, Klebsiella pneumoniae, Klebsiella oxytoca, Citrobacter koseri and Citrobacter freundii. RESULTS: Phylogenetic analysis of the type 3 fimbrial genes (mrkABCD) from 39 strains revealed they clustered into five distinct clades (A-E) ranging from one to twenty-three members. The majority of sequences grouped in clade A, which was represented by the mrk gene cluster from the genome sequenced K. pneumoniae MGH78578. The E. coli and K. pneumoniae mrkABCD gene sequences clustered together in two distinct clades, supporting previous evidence for the occurrence of inter-genera lateral gene transfer. All of the strains examined caused type 3 fimbriae mediated agglutination of tannic acid treated human erythrocytes despite sequence variation in the mrkD-encoding adhesin gene. Type 3 fimbriae deletion mutants were constructed in 13 representative strains and were used to demonstrate a direct role for type 3 fimbriae in biofilm formation. CONCLUSIONS: The expression of functional type 3 fimbriae is common to many Gram-negative pathogens that cause CAUTI and is strongly associated with biofilm growth. Our data provides additional evidence for the spread of type 3 fimbrial genes by lateral gene transfer. Further work is now required to substantiate the clade structure reported here by examining more strains as well as other bacterial genera that make type 3 fimbriae and cause CAUTI.


Subject(s)
Citrobacter freundii/metabolism , Citrobacter koseri/metabolism , Escherichia coli/metabolism , Fimbriae Proteins/metabolism , Klebsiella oxytoca/metabolism , Klebsiella pneumoniae/metabolism , Citrobacter freundii/genetics , Citrobacter koseri/genetics , Escherichia coli/genetics , Fimbriae Proteins/classification , Fimbriae Proteins/genetics , Gene Expression Regulation, Bacterial/physiology , Klebsiella oxytoca/genetics , Klebsiella pneumoniae/genetics , Phylogeny
8.
Extremophiles ; 13(3): 403-10, 2009 May.
Article in English | MEDLINE | ID: mdl-19347566

ABSTRACT

Bacterial type IV pili perform important functions in such disparate biological processes as surface adhesion, cell-cell interactions, autoaggregation, conjugation, and twitching motility. Unlike bacteria, archaea use a type IV pilus related structure to drive swimming motility. While this unique flagellum is the best-studied example of an archaeal IV pilus-like structure, recent in silico, in vivo and structural analyses have revealed a highly diverse set of archaeal non-flagellar type IV pilus-like structures. Accumulating evidence suggests that these structures play important diverse roles in archaea.


Subject(s)
Archaea , Fimbriae Proteins/classification , Fimbriae Proteins/chemistry , Protein Conformation
9.
Oral Microbiol Immunol ; 24(5): 423-6, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19702958

ABSTRACT

BACKGROUND AND OBJECTIVES: Porphyromonas gingivalis is frequently identified to type by evaluation of fimA polymorphisms and less often by pulsed-field gel electrophoresis (PFGE) because of the technical intricacies of PFGE. To compare these techniques, we genotyped P. gingivalis clinical isolates as to (i) their fimA type and (ii) their whole genome restriction profile (PFGE analysis). MATERIAL AND METHODS: Thirty-two P. gingivalis strains were isolated from 16 unrelated periodontitis patients. Two strains were isolated from each patient. Strains were subjected to a fimA-typing polymerase chain reaction (PCR) assay. Strains that could not be typed by PCR were submitted to sequencing of the entire fimA gene. The PFGE profiles of clinical strains were compared using bioinformatic analysis. RESULTS: Seven of the 32 isolates were not typeable by PCR and so their entire fimA gene was sequenced. The sequencing identified each strain as belonging to a single fimA type. In one case, sequencing of the fimA gene did not agree with the result obtained using fimA PCR typing. With the exception of one patient, each patient presented isolates bearing the same fimA type. However, in three patients, isolates with the same fimA type presented different PFGE pulsotypes. CONCLUSION: The P. gingivalis typing using fimA PCR has limitations in typeability and discriminatory power. A typing technique for P. gingivalis that is easy to perform but that presents adequate typeability and discriminatory power is needed if we want to better understand the epidemiology of periodontal disease.


Subject(s)
Bacteroidaceae Infections/microbiology , Fimbriae Proteins/classification , Periodontitis/microbiology , Pili, Sex/classification , Porphyromonas gingivalis/classification , Bacterial Typing Techniques , Clone Cells/classification , Electrophoresis, Gel, Pulsed-Field , Fimbriae Proteins/genetics , Genome, Bacterial/genetics , Genotype , Humans , Phylogeny , Pili, Sex/genetics , Porphyromonas gingivalis/isolation & purification
10.
J Periodontal Res ; 44(1): 1-12, 2009 Feb.
Article in English | MEDLINE | ID: mdl-18973529

ABSTRACT

BACKGROUND AND OBJECTIVE: Research on Porphyromonas gingivalis, a periodontopathogen, has provided a tremendous amount of information over the last 20 years, which may exceed in part than that on other closely related members in terms of phylogenetic as well as proteomic criteria, including Bacteroides fragilis and B. thetaiotaomicron as major anaerobic, opportunistic pathogens in the medical field. In this minireview, we focused on recent research findings concerning surface components such as outer membrane proteins and fimbriae, of P. gingivalis. MATERIAL AND METHODS: Elucidation of the surface components in P. gingivalis was especially difficult because outer membrane proteins are tightly bound to lipopolysaccharide and they are resistant to dissociation and separation from each other, even during sodium dodecyl sulfate-polyacrylamide gel electrophoresis, unless samples are appropriately heated. In addition, P. gingivalis is asaccharolytic and therefore a potent proteolytic bacterium, another factor causing difficulty in research. The study of the surface components was carefully carried out considering these unique features in P. gingivalis when compared with other gram-negative bacteria, including Escherichia coli and Pseudomonas aeruginosa. RESULTS: Separation of outer membrane proteins, and characterization of OmpA-like proteins and RagAB as major proteins, is described herein. Our recent findings on FimA and Mfa1 fimbriae, two unique appendages in this organism, and on their regulation of expression are also described briefly. CONCLUSION: Surface components of P. gingivalis somehow have contact with host tissues and cells because of the outermost cell elements. Therefore, such bacterial components are potentially important in the occurrence of periodontal diseases.


Subject(s)
Bacterial Outer Membrane Proteins/classification , Porphyromonas gingivalis/metabolism , Bacterial Proteins/classification , Bacteroides/metabolism , Fimbriae Proteins/classification , Fimbriae, Bacterial/chemistry , Humans , Phylogeny , Pili, Sex/chemistry , Proteome/classification
11.
J Microbiol Methods ; 158: 93-98, 2019 03.
Article in English | MEDLINE | ID: mdl-30742840

ABSTRACT

Bacterial fruit blotch (BFB) of cucurbits, caused by Acidovorax citrulli, is a major threat to commercial watermelon and melon production worldwide. At present, there are at least two genetically distinct sub-populations (group I and II) of A. citrulli that differ in host preference among cucurbit species and copper sensitivity. In this study, we analyzed the pilA gene sequences of 103 A. citrulli strains from China and other countries. Based on these data, we classified all tested A. citrulli strains into three types. The pilA-based type 1 strains in this study coincided with the previously established group I strains; while the type 2 strains coincided with group II strains. Ten strains that did not cluster with group I or II strains were classified into a new type, designated type 3. Based on differences in pilA sequences, we designed a multiplex PCR assay to distinguish the three A. citrulli pilus types. This multiplex PCR assay has proven to be viable for strain typing of 139 A. citrulli strains and for the detection of this pathogen in artificially inoculated seeds and leaves and naturally infected leaves and fruits. This assay proved to be rapid, accurate, reliable and applicable for early distinction of A. citrulli types associated with BFB epidemics. It may also inform the judicious and environmentally sound use of bactericides, especially copper-based compounds.


Subject(s)
Comamonadaceae/genetics , Fimbriae Proteins/classification , Fimbriae Proteins/genetics , Multiplex Polymerase Chain Reaction , Fruit/microbiology , Plant Diseases/microbiology
12.
Folia Microbiol (Praha) ; 50(2): 107-12, 2005.
Article in English | MEDLINE | ID: mdl-16110913

ABSTRACT

Primers were designed and prepared and conditions were determined for PCR detection and differentiation of enterotoxigenic E. coli bacterial strains isolated from diarrheic pigs. Primers K88/1 and K88/2 are 25 bp oligomers that correspond to a region of genes encoding one of serological variants of the K88 antigen (K88ab(1), K88ab(2), K88ac or K88ad). A positive result of PCR is an amplificate of 792 bp in size for K88ab and K88ad variant or 786 bp for K88ac variant. The individual serological variants of genes of the K88 antigen could be differentiated by cutting the obtained PCR amplificates by restriction endonucleases. The PCR analysis of 674 E. coli strains isolated from diarrheic pigs showed that 184 strains were K88 positive. By using restriction endonucleases the K88-positive strains were in 4 cases classified as K88ab variant, 180 as K88ac variant and none contained gene for the K88ad variant. Ninety-five % coincidence with serological examination using K88ab, K88ac and K88ad specific antibodies was shown.


Subject(s)
Antigens, Bacterial/analysis , Antigens, Bacterial/classification , Diarrhea/veterinary , Escherichia coli Infections/veterinary , Escherichia coli Proteins/analysis , Escherichia coli Proteins/classification , Escherichia coli/isolation & purification , Fimbriae Proteins/analysis , Fimbriae Proteins/classification , Polymerase Chain Reaction/methods , Swine Diseases/microbiology , Animals , Antigens, Bacterial/genetics , DNA Primers , DNA Restriction Enzymes/metabolism , Diarrhea/microbiology , Escherichia coli/classification , Escherichia coli/genetics , Escherichia coli Infections/microbiology , Escherichia coli Proteins/genetics , Fimbriae Proteins/genetics , Genetic Variation , Slovakia , Swine
13.
J Periodontol ; 74(9): 1355-60, 2003 Sep.
Article in English | MEDLINE | ID: mdl-14584870

ABSTRACT

BACKGROUND: Porphyromonas gingivalis is one of the major microbial pathogens associated with chronic periodontitis. To eradicate such pathogens by periodontal therapy, it is essential to clarify the source of infection. Recent findings suggest that the genotype of the fimbriae is one of the important factors in infection by P. gingivalis. The objectives of the present study were to investigate the transmission of P. gingivalis between spouses and to determine the relationship between P. gingivalis fimA type and colonization. METHODS: A total of 14 couples were selected to investigate the transmission of P. gingivalis and its association with the fimA types. To examine the distribution of fimA type in the general population, 32 subgingival plaque samples from 47 patients with periodontitis were also tested. The transmission of P. gingivalis strains was determined by using pulsed field gel electrophoresis (PFGE). P. gingivalis strains isolated from the couples and subgingival dental plaque samples were studied for fimA classification. RESULTS: The PFGE patterns of P. gingivalis strains from matched husbands and wives were identical for six of the 14 couples. In five of these six couples (83.3%), P. gingivalis strains harboring the type II fimA gene were present. The proportion of type II fimA in the strains isolated from couples with probable intrafamilial transmission was significantly higher than that in patients with periodontitis or in the group of samples isolated from one member of a couple. CONCLUSION: This study suggests that fimA type II, even though widely distributed in patients with periodontitis, may be an important factor in the transmission of P. gingivalis between spouses.


Subject(s)
Fimbriae Proteins/classification , Periodontitis/microbiology , Pili, Sex/classification , Porphyromonas gingivalis/classification , Spouses , Adult , Aged , Bacteroidaceae Infections/transmission , Dental Plaque/microbiology , Electrophoresis, Gel, Pulsed-Field , Family Health , Female , Fimbriae Proteins/genetics , Humans , Male , Middle Aged , Pili, Sex/genetics , Porphyromonas gingivalis/physiology
14.
J Periodontol ; 74(1): 90-6, 2003 Jan.
Article in English | MEDLINE | ID: mdl-12593602

ABSTRACT

Porphyromonas gingivalis is a predominant periodontal pathogen, which expresses a number of potential virulence factors involved in the pathogenesis of periodontitis. Among them, fimbriae are a critical factor to mediate the bacterial interaction with host tissues, which promotes the bacterial adhesion to and invasion of the targeted sites. Fimbriae are capable of binding to human salivary components, commensal bacteria, and a variety of host cells including macrophages, epithelial cells, and fibroblasts. Human extracellular matrix (ECM) proteins such as vitronectin and fibronectin play important roles in cellular signal transduction via binding to receptor integrins. Fimbriae showed significant binding affinity to ECM proteins and clearly inhibited the molecular interactions between vitronectin/fibronectin and their receptor alphavbeta3 and alpha5beta1 integrins overexpressed on Chinese hamster ovary (CHO) cell strain. P. gingivalis fimbriae are likely to interrupt the cellular signaling via ECM proteins/integrins in periodontal regions. Fimbriae are also thought to be critically important in invasive events of the organism to host cells. The fimA genes, encoding FimA (a subunit of fimbriae), of P. gingivalis strains are classified into 5 types, I to V. Recent clinical investigations demonstrated the close relationship between the organisms with type II fimA and periodontitis development. Recombinant FimA (rFimA) proteins of types I to V were generated to compare their adhesion/invasion abilities to human gingival fibroblasts (HGF) and a human epithelial cell line (HEp-2 cells), respectively. There were no significant differences in the adhesion ability of microspheres (MS) coated with these rFimAs to HGF; however, the adhesion of type II rFimA-MS to HEp-2 cells was significantly greater than that of other rFimA types. It was also observed that the type II rFimA-MS markedly invaded the epithelial cells and accumulated around the nuclei. Collectively, these findings suggest that fimbriae of P. gingivalis, especially type II, are involved in the initiation and progression of human periodontitis.


Subject(s)
Bacteroidaceae Infections/physiopathology , Periodontal Diseases/microbiology , Porphyromonas gingivalis/physiology , Animals , Bacterial Adhesion/physiology , CHO Cells , Cricetinae , Disease Progression , Epithelial Cells/microbiology , Fibroblasts/microbiology , Fibronectins/physiology , Fimbriae Proteins/classification , Fimbriae Proteins/genetics , Fimbriae, Bacterial/physiology , Gingiva/cytology , Gingiva/microbiology , Humans , Integrin alpha5beta1/physiology , Integrin alphaVbeta3/physiology , Macrophages/microbiology , Periodontitis/microbiology , Pili, Sex/genetics , Pili, Sex/physiology , Recombinant Proteins , Saliva/microbiology , Signal Transduction/physiology , Virulence Factors/physiology , Vitronectin/physiology
15.
J Oral Sci ; 46(1): 9-14, 2004 Mar.
Article in English | MEDLINE | ID: mdl-15141718

ABSTRACT

Several studies have provided clinical evidence that FimA clonal variation may contribute to the periodontopathogenicity of Porphyromonas gingivalis (P.g.). We studied the gene expression profiling of the macrophage-like human cell line U937 after infection of two types of P.g. (fimA type I; Pg-I and fimA type II; Pg-II) using microarray. Of 1088 genes examined, 394 genes were detectable. Bioinformatics algorithms were used to analyze the detectable genes. Hierarchical clustering analysis showed that gene expression patterns of Pg-II and the control (no infection) were grouped together. K-means clustering grouped 79 genes into Pg-II dominance and 88 genes into Pg-I dominance. A large number of genes related to cell signaling, extracellular communication proteins, cell receptors (by ligands), protein turnover and cell adhesion receptors/proteins were grouped into clusters of Pg-I dominance. Our results indicate that compared with Pg-I, Pg-II induces a low host response as measured by its weak induction of gene expression.


Subject(s)
Gene Expression Regulation, Bacterial/genetics , Macrophages/microbiology , Porphyromonas gingivalis/genetics , Bacteroidaceae Infections/microbiology , Cell Communication/genetics , Cells, Cultured , Fimbriae Proteins/classification , Fimbriae Proteins/genetics , Humans , Integrins/genetics , Oligonucleotide Array Sequence Analysis , Pili, Sex/classification , Pili, Sex/genetics , Porphyromonas gingivalis/classification , Porphyromonas gingivalis/pathogenicity , Proteins/genetics , Receptors, Cell Surface/genetics , Transcriptional Activation
16.
J Investig Clin Dent ; 5(3): 201-7, 2014 Aug.
Article in English | MEDLINE | ID: mdl-23447375

ABSTRACT

AIM: The objective of the present study was to detect the presence of Porphyromonas gingivalis (fimA), Aggregatibacter actinomycetemcomitans, and red complex in the coronary plaque of patients with coronary artery disease. METHODS: The study population consisted of 51 patients with chronic periodontitis undergoing coronary artery bypass grafting. DNA was extracted from subgingival and coronary atherosclerotic plaque samples. Polymerase chain reaction was used to amplify the part of 16S rRNA gene to detect the presence of Aggregatibacter actinomycetemcomitans, Porphyromonas gingivalis (fimA), Porphyromonas gingivalis, Tannerella forsythia, and Treponema denticola. RESULTS: Aggregatibacter actinomycetemcomitans, Tannerella forsythia, Porphyromonas gingivalis, Porphyromonas gingivalis (fimA), and Treponema denticola were detected in 0%, 31.4%, 45.1%, 39.2%, and 51% of the atherosclerotic plaque samples, respectively. In both subgingival and coronary atherosclerotic plaque samples, Tannerella forsythia was detected in 19.6%, Porphyromonas gingivalis in 39.2%, Porphyromonas gingivalis (fimA) in 33.3%, and Treponema denticola in 35.3% of the samples. CONCLUSION: The study confirmed the detection of red complex bacteria in coronary plaque samples. However Aggregatibacter actinomycetemcomitans could not be detected in these samples.


Subject(s)
Aggregatibacter actinomycetemcomitans/genetics , Coronary Artery Disease/microbiology , Fimbriae Proteins/genetics , Pili, Sex/genetics , Plaque, Atherosclerotic/microbiology , Porphyromonas gingivalis/genetics , Adult , Aged , Aged, 80 and over , Aggregatibacter actinomycetemcomitans/classification , Bacteroides/classification , Bacteroides/genetics , Chronic Periodontitis/complications , Chronic Periodontitis/microbiology , Coronary Artery Bypass , Coronary Artery Disease/surgery , DNA, Bacterial/analysis , Dental Plaque/microbiology , Dental Plaque Index , Female , Fimbriae Proteins/classification , Humans , Male , Middle Aged , Pili, Sex/classification , Plaque, Atherosclerotic/surgery , Polymerase Chain Reaction , Porphyromonas gingivalis/classification , RNA, Bacterial/analysis , RNA, Ribosomal, 16S/analysis , Treponema denticola/classification , Treponema denticola/genetics
17.
Mol Oral Microbiol ; 28(5): 392-403, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23809984

ABSTRACT

The periodontal pathogen Porphyromonas gingivalis generally expresses two distinct fimbriae, FimA and Mfa1, which play a role in biofilm formation. The fimA gene that encodes FimA fimbrilin is polymorphic, and polymerase chain reaction analysis has identified six genotypes called types I-V and Ib. We found recently that fimbriae exhibit antigenic heterogeneity among the genotypes. In the present study, we analysed the fimA DNA sequences of 84 strains of P. gingivalis and characterized the antigenicity of FimA fimbriae. Strains analysed here comprised 10, 16, 29, 13, 10 and 6 strains of types I, Ib, II, III, IV and V, respectively. DNA sequencing revealed that type Ib does not represent a single cluster and that type II sequences are remarkably diverse. In contrast, the fimA sequences of the other types were relatively homogeneous. Antigenicity was investigated using antisera elicited by pure FimA fimbriae of types I-V. Antigenicity correlated generally with the respective genotype. Type Ib strains were recognized by type I antisera. However, some strains showed cross-reactivity, especially, many type II strains reacted with type III antisera. The levels of fimbrial expression were highly variable, and expression was positively correlated with ability of biofilm formation on a saliva-coated plate. Further, two strains without FimA and Mfa1 fimbriae expressed fimbrial structures, suggesting that the strains produce other types of fimbriae.


Subject(s)
Antigens, Bacterial/genetics , Fimbriae Proteins/genetics , Pili, Sex/genetics , Porphyromonas gingivalis/genetics , Antigenic Variation/genetics , Antigens, Bacterial/classification , Antigens, Bacterial/immunology , Bacterial Proteins/genetics , Bacterial Proteins/immunology , Biofilms , Cross Reactions/immunology , DNA, Bacterial/genetics , Dental Pellicle/microbiology , Fimbriae Proteins/classification , Fimbriae Proteins/immunology , Genotype , Humans , Open Reading Frames/genetics , Pili, Sex/immunology , Porphyromonas gingivalis/immunology , Saliva/microbiology , Sequence Analysis, DNA
18.
J Oral Sci ; 54(1): 77-83, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22466890

ABSTRACT

Porphyromonas gingivalis FimA fimbriae have been classified into 6 genotypes (types I-V and Ib) based on the diversity of the fimA genes encoding the fimbrial subunits. We investigated the prevalence of fimA genotype in Japanese children. Dental plaque specimens were obtained from 400 subjects (age; 2 to 15 years), including 134 with healthy gingiva, 239 with gingivitis and 27 with periodontitis, and then analyzed by polymerase chain reaction. P. gingivalis was detected in 1.5%, 10.0% and 29.6% of these subjects, respectively. Significant differences were observed with regard to P. gingivalis infection among the groups [chi-squared analysis: gingivitis vs. healthy, P < 0.01, odds ratio (OR) = 7.4; periodontitis vs. healthy, P < 0.001, OR = 27.8]. In P. gingivalis-positive subjects with periodontitis, the most prevalent fimA types were type Ib/type II combination (37.5%) and type IV (37.5%), followed by type II (25.0%), while type IV (33.3%) and type II (29.2%) were most often detected in those with gingivitis. Our results suggest that the presence of P. gingivalis is associated with periodontal diseases, and that the type II, IV and Ib/II combination are the most common among fimA genotypes.


Subject(s)
Dental Plaque/microbiology , Fimbriae Proteins/genetics , Gingivitis/microbiology , Periodontitis/microbiology , Porphyromonas gingivalis/genetics , Adolescent , Chi-Square Distribution , Child , Child, Preschool , DNA, Bacterial/genetics , Dental Plaque/epidemiology , Fimbriae Proteins/classification , Genotype , Gingivitis/epidemiology , Humans , Infant , Japan/epidemiology , Molecular Epidemiology , Odds Ratio , Periodontitis/epidemiology
19.
J Vet Med Sci ; 74(7): 885-91, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22382732

ABSTRACT

Porphyromonas gulae, a gram-negative black-pigmented anaerobe, is a pathogen for periodontitis in dogs. An approximately 41-kDa fimbrial subunit protein (FimA) encoded by fimA is regarded as associated with periodontitis. In the present study, the fimA genes of 17 P. gulae strains were sequenced, and classified into two major types. The generation of phylogenetic trees based on the deduced amino acid sequence of FimA of P. gulae strains along with sequences from several strains of Porphyromonas gingivalis, a major cause of human periodontitis, revealed that the two types of FimA (types A and B) of P. gulae were similar to type I FimA and types II and III FimA of P. gingivalis, respectively. A PCR system for classification was established based on differences in the nucleotide sequences of the fimA genes. Analysis of 115 P. gulae-positive oral swab specimens from dogs revealed that 42.6%, 22.6%, and 26.1% of them contained type A, type B, and both type A and B fimA genes, respectively. Experiments with a mouse abscess model demonstrated that the strains with type B fimA caused significantly greater systemic inflammation than those with type A. These results suggest that the FimA proteins of P. gulae are diverse with two major types and that strains with type B fimA could be more virulent.


Subject(s)
Dog Diseases/microbiology , Fimbriae Proteins/genetics , Genetic Variation , Periodontitis/veterinary , Phylogeny , Porphyromonas/metabolism , Amino Acid Sequence , Animals , Base Sequence , Cluster Analysis , DNA Primers/genetics , Dog Diseases/pathology , Dogs , Fimbriae Proteins/classification , Mice , Molecular Sequence Data , Periodontitis/microbiology , Periodontitis/pathology , Sequence Alignment , Sequence Analysis, DNA/veterinary
20.
Vaccine ; 28(30): 4817-26, 2010 Jul 05.
Article in English | MEDLINE | ID: mdl-20457291

ABSTRACT

The rapid onset and dramatic consequences of Neisseria meningitidis infections make the design of a broadly protective vaccine a priority for public health. There is an ongoing quest for meningococcal components that are surface exposed, widely conserved and can induce protective antibodies. Type IV pili (Tfp) are filamentous structures with a key role in pathogenesis that extend beyond the surface of the bacteria and have demonstrated vaccine potential. However, extensive antigenic variation of PilE, the major subunit of Tfp, means that they are currently considered to be unsuitable vaccine components. Recently it has been shown that Tfp also contain low abundance pilins ComP, PilV and PilX in addition to PilE. This prompted us to examine the prevalence and sequence diversity of these proteins in a panel of N. meningitidis disease isolates. We found that all minor pilins are highly conserved and the major pilin genes are also highly conserved within the ST-8 and ST-11 clonal complexes. These data have important implications for the re-consideration of pilus subunits as vaccine antigens.


Subject(s)
Fimbriae Proteins/genetics , Meningococcal Vaccines/genetics , Neisseria meningitidis/genetics , Antigens, Bacterial/genetics , Antigens, Bacterial/immunology , Base Sequence , Cloning, Molecular , Conserved Sequence , Fimbriae Proteins/classification , Genes, Bacterial/genetics , Humans , Meningococcal Infections/microbiology , Molecular Sequence Data , Phylogeny , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment
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