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1.
Nat Chem Biol ; 17(9): 964-974, 2021 09.
Article in English | MEDLINE | ID: mdl-34083810

ABSTRACT

A remarkable feature of the microtubule cytoskeleton is the coexistence of subpopulations having different dynamic properties. A prominent example is the anaphase spindle, where stable antiparallel bundles exist alongside dynamic microtubules and provide spatial cues for cytokinesis. How are the dynamics of spatially proximal arrays differentially regulated? We reconstitute a minimal system of three midzone proteins: microtubule-crosslinker PRC1 and its interactors CLASP1 and Kif4A, proteins that promote and suppress microtubule elongation, respectively. We find that their collective activity promotes elongation of single microtubules while simultaneously stalling polymerization of crosslinked bundles. This differentiation arises from (1) strong rescue activity of CLASP1, which overcomes the weaker effects of Kif4A on single microtubules, and (2) lower microtubule- and PRC1-binding affinity of CLASP1, which permits the dominance of Kif4A at overlaps. In addition to canonical mechanisms where antagonistic regulators set microtubule length, our findings illuminate design principles by which collective regulator activity creates microenvironments of arrays with distinct dynamic properties.


Subject(s)
Cell Cycle Proteins/metabolism , Kinesins/metabolism , Microtubule-Associated Proteins/metabolism , Microtubules/metabolism , Cell Cycle Proteins/genetics , Cell Cycle Proteins/isolation & purification , Humans , Kinesins/genetics , Kinesins/isolation & purification , Microtubule-Associated Proteins/genetics , Microtubule-Associated Proteins/isolation & purification
2.
Biomacromolecules ; 15(5): 1797-805, 2014 May 12.
Article in English | MEDLINE | ID: mdl-24697688

ABSTRACT

The microtubule (MT) is the stiffest cytoskeletal filamentous protein that takes part in a wide range of cellular activities where its mechanical property plays a crucially significant role. How a single biological entity plays multiple roles in cell has been a mystery for long time. Over the recent years, it has been known that modulation of the mechanical property of MT by different cellular agents is the key to performing manifold in vivo activities by MT. Studying the mechanical property of MT thus has been a prerequisite in understanding how MT plays such diversified in vivo roles. However, the anisotropic structure of MT has been an impediment in obtaining a precise description of the mechanical property of MT along its longitudinal and lateral directions that requires employment of distinct experimental approach and has not been demonstrated yet. In this work, we have developed an experimental system that enabled us to investigate the effect of tensile stress on MT. By using our newly developed system, (1) we have determined the Young's modulus of MT considering its deformation under applied tensile stress and (2) a new role of MT associated motor protein kinesin in modulating the mechanical property of MT was revealed for the first time. Decrease in Young's modulus of MT with the increase in interaction with kinesin suggests that kinesin has a softening effect on MT and thereby can modulate the rigidity of MT. This work will be an aid in understanding the modulation of mechanical property of MTs by MT associated proteins and might also help obtain a clear insight of the endurance and mechanical instability of MTs under applied stress.


Subject(s)
Kinesins/metabolism , Microtubules/chemistry , Microtubules/metabolism , Animals , Kinesins/chemistry , Kinesins/isolation & purification , Surface Properties , Swine , Tubulin/chemistry , Tubulin/isolation & purification , Tubulin/metabolism
3.
Proteins ; 80(4): 1016-27, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22493778

ABSTRACT

Kar3 kinesins are microtubule (MT) minus-end-directed motors with pleiotropic functions in mitotic spindle formation and nuclear movement in budding and fission yeasts. A Kar3-like kinesin is also expressed by the filamentous fungus Ashbya gossypi, which exhibits different nuclear movement challenges from its yeast relatives. Presented here is a 2.35 Å crystal structure and enzymatic analysis of the AgKar3 motor domain (AgKar3MD). Compared to the previously published Saccharomyces cerevisiae Kar3MD structure (ScKar3MD), AgKar3MD displays differences in the conformation of some of its nucleotide-binding motifs and peripheral elements. Unlike ScKar3MD, the salt bridge between Switch I and Switch II in AgKar3MD is broken. Most of the Switch I, and the adjoining region of helix α3, are also disordered instead of bending into the active site cleft as is observed in ScKar3MD. These aspects of AgKar3MD are highly reminiscent of the ScKar3 R598A mutant that disrupts the Switch I-Switch II salt bridge and impairs MT-stimulated ATPase activity of the motor. Subtle differences in the disposition of secondary structure elements in the small lobe (ß1a, ß1b, and ß1c) at the edge of the MD are also apparent even though it contains approximately the same number of residues as ScKar3. These differences may reflect the unique enzymatic properties we measured for this motor, which include a lower MT-stimulated ATPase rate relative to ScKar3, or they could relate to its interactions with different regulatory companion proteins than its budding yeast counterpart.


Subject(s)
Ascomycota/chemistry , Fungal Proteins/chemistry , Kinesins/chemistry , Adenosine Triphosphatases/chemistry , Amino Acid Sequence , Ascomycota/classification , Ascomycota/enzymology , Catalytic Domain , Cloning, Molecular , Crystallography, X-Ray/methods , Enzyme Activation , Fungal Proteins/classification , Fungal Proteins/isolation & purification , Kinesins/classification , Kinesins/isolation & purification , Molecular Sequence Data , Phylogeny , Protein Binding , Protein Structure, Secondary , Protein Structure, Tertiary , Sequence Alignment , Structure-Activity Relationship
4.
J Cell Sci ; 123(Pt 10): 1732-41, 2010 May 15.
Article in English | MEDLINE | ID: mdl-20427314

ABSTRACT

A key process during epithelial polarization involves establishment of polarized transport routes from the Golgi to distinct apical and basolateral membrane domains. To do this, the machinery involved in selective trafficking must be regulated during differentiation. Our previous studies showed that KIF5B selectively transports vesicles containing p75-neurotrophin receptors to the apical membrane of polarized, but not non-polarized MDCK cells. To identify the kinesin(s) responsible for p75 trafficking in non-polarized MDCK cells we expressed KIF-specific dominant-negative constructs and assayed for changes in post-Golgi transport of p75 by time-lapse fluorescence microscopy. Overexpression of the tail domains of kinesin-3 family members that contain a C-terminal pleckstrin homology (PH) domain, KIF1A or KIF1Bbeta, attenuated the rate of p75 exit from the Golgi in non-polarized MDCK cells but not in polarized cells. Analysis of p75 post-Golgi transport in cells expressing KIF1A or KIF1Bbeta with their PH domains deleted revealed that vesicle transport by these motors depends on the PH domains. Furthermore, purified KIF1A and KIF1Bbeta tails interact with p75 vesicles and these interactions require the PH domain. Knockdown of canine KIF1A also inhibited exit of p75 from the Golgi, and this was rescued by expression of human KIF1A. Together these data demonstrate that post-Golgi transport of p75 in non-polarized epithelial cells is mediated by kinesin-3 family motors in a PH-domain-dependent process.


Subject(s)
Epithelial Cells/metabolism , Kinesins/metabolism , Receptor, Nerve Growth Factor/metabolism , Animals , Cell Line , Cell Polarity , Cloning, Molecular , Dogs , Epithelial Cells/pathology , Golgi Apparatus/metabolism , Hydrogen-Ion Concentration , Kinesins/genetics , Kinesins/isolation & purification , Membrane Microdomains/metabolism , Protein Structure, Tertiary/genetics , Protein Transport/genetics , RNA, Small Interfering/genetics , Transgenes/genetics
5.
New Phytol ; 193(3): 576-589, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22074362

ABSTRACT

• Kinesins with a calponin homology domain (KCHs) have been identified recently as a plant-specific subgroup of the kinesin-14 family and are suspected to act as microtubule-actin filament cross-linkers. The cellular function, however, has remained elusive. • In order to address the function of KCHs, we isolated NtKCH, a novel KCH homologue from tobacco BY-2 cells. Following synchronization, NtKCH transcripts were shown to be abundant during mitosis, whereas, during interphase, expression was low. • Using fluorescent-tagged cell lines and immunolabelling techniques, the localization of tobacco KCH was found to differ depending on the cell cycle. During interphase, NtKCH mainly associated with cortical microtubules, whereas a subfraction also co-localized with perinuclear actin cables. In dividing cells, NtKCH accumulated at the pre-prophase band and at the phragmoplast. However, it remained absent from spindle microtubules, but, instead, concentrated at two agglomerations in proximity to the two cell poles. • This work develops a detailed model for the dual localization and function of NtKCH during cell division vs cell expansion. This model implies two dynamic states of KCHs that differ with regard to actin interaction. This allows the modulation of force generation by KCH in a cell cycle-dependent capture mechanism.


Subject(s)
Actins/metabolism , Cell Division , Cross-Linking Reagents/metabolism , Kinesins/metabolism , Microtubules/metabolism , Nicotiana/cytology , Plant Proteins/metabolism , Amino Acid Sequence , Cell Line , Cell Proliferation , Gene Expression Regulation, Plant , Green Fluorescent Proteins/metabolism , Interphase , Kinesins/chemistry , Kinesins/genetics , Kinesins/isolation & purification , Mitosis , Models, Biological , Molecular Sequence Data , Plant Proteins/chemistry , Plant Proteins/genetics , Plant Proteins/isolation & purification , Protein Transport , RNA, Messenger/genetics , RNA, Messenger/metabolism , Recombinant Fusion Proteins/metabolism , Sequence Analysis, Protein , Spindle Apparatus/metabolism , Time-Lapse Imaging , Nicotiana/genetics , Nicotiana/metabolism , Up-Regulation/genetics
6.
Lab Chip ; 10(6): 755-61, 2010 Mar 21.
Article in English | MEDLINE | ID: mdl-20221564

ABSTRACT

Gliding microtubules (MTs) on a surface coated with kinesin biomolecular motors have been suggested for the development of nanoscale transport systems. In order to establish a sorting function for gliding MTs, events for MTs approaching micro-scale grooves were investigated. MTs longer than the width of grooves fabricated on a Si substrate bridged the grooves (bridging) and many MTs shorter than the groove width almost began to bridge, but returned to the surface that they approached from (guiding). Occurrence probabilities for the events were analyzed with focus on the geometric conditions, such as length of the MTs, width of the grooves, and the incident angle (alpha) of the MTs approaching the grooves. The occurrence probability for bridging increased with an increase in the incident angle (16%, alpha = 0-30 degrees; 51%, alpha = 30-60 degrees; 75%, alpha = 60-90 degrees), and the probability for guiding decreased with an increase in the incident angle (79%, alpha = 0-30 degrees; 55%, alpha = 30-60 degrees; 5%, alpha = 60-90 degrees). The results indicate that an incident angle of 30-60 degrees is an effective condition for MT sorting, because the bridging and guiding events can sort MTs that are longer and shorter than the groove widths, respectively. Furthermore, the occurrence probabilities of both bridging and guiding in a higher concentration of methylcellulose (0.5%) increased up to approximately 70% at incident angles of 30-60 degrees, indicating good feasibility for the development of devices for the sorting of MTs on surfaces with topographical grooves.


Subject(s)
Kinesins/chemistry , Kinesins/isolation & purification , Microfluidic Analytical Techniques/instrumentation , Micromanipulation/instrumentation , Microtubules/chemistry , Molecular Motor Proteins/chemistry , Molecular Motor Proteins/isolation & purification , Equipment Design , Equipment Failure Analysis , Molecular Weight , Surface Properties
7.
Hum Mol Genet ; 17(9): 1245-52, 2008 May 01.
Article in English | MEDLINE | ID: mdl-18203753

ABSTRACT

Hereditary spastic paraplegia (HSP) is a neurodegenerative disease caused by motoneuron degeneration. It is linked to at least 30 loci, among them SPG10, which causes dominant forms and originates in point mutations in the neuronal Kinesin-1 gene (KIF5A). Here, we investigate the motility of KIF5A and four HSP mutants. All mutations are single amino-acid exchanges and located in kinesin's motor or neck domain. The mutation in the neck (A361V) did not change the gliding properties in vitro, the others either reduced microtubule affinity or gliding velocity or both. In laser-trapping assays, none of the mutants moved more than a few steps along microtubules. Motility assays with mixtures of homodimeric wild-type, homodimeric mutant and heterodimeric wild-type/mutant motors revealed that only one mutant (N256S) reduces the gliding velocity at ratios present in heterozygous patients, whereas the others (K253N, R280C) do not. Attached to quantum dots as artificial cargo, mixtures involving N256S mutants produced slower cargo populations lagging behind in transport, whereas mixtures with the other mutants led to populations of quantum dots that rarely bound to microtubules. These differences indicate that the dominant inheritance of SPG10 is caused by two different mechanisms that both reduce the gross cargo flux, leading to deficient supply of the synapse.


Subject(s)
Kinesins/genetics , Point Mutation , Spastic Paraplegia, Hereditary/genetics , Amino Acid Sequence , Animals , Biological Transport , Cell Movement , Genes, Dominant , Heterozygote , Humans , Kinesins/chemistry , Kinesins/isolation & purification , Kinesins/metabolism , Microtubules/physiology , Molecular Motor Proteins/chemistry , Molecular Motor Proteins/genetics , Molecular Motor Proteins/isolation & purification , Molecular Motor Proteins/metabolism , Mutation, Missense , Protein Structure, Tertiary , Quantum Dots , Swine
8.
Mol Biol Cell ; 18(1): 282-94, 2007 Jan.
Article in English | MEDLINE | ID: mdl-17093055

ABSTRACT

Spindle assembly and accurate chromosome segregation require the proper regulation of microtubule dynamics. MCAK, a Kinesin-13, catalytically depolymerizes microtubules, regulates physiological microtubule dynamics, and is the major catastrophe factor in egg extracts. Purified GFP-tagged MCAK domain mutants were assayed to address how the different MCAK domains contribute to in vitro microtubule depolymerization activity and physiological spindle assembly activity in egg extracts. Our biochemical results demonstrate that both the neck and the C-terminal domain are necessary for robust in vitro microtubule depolymerization activity. In particular, the neck is essential for microtubule end binding, and the C-terminal domain is essential for tight microtubule binding in the presence of excess tubulin heterodimer. Our physiological results illustrate that the N-terminal domain is essential for regulating microtubule dynamics, stimulating spindle bipolarity, and kinetochore targeting; whereas the C-terminal domain is necessary for robust microtubule depolymerization activity, limiting spindle bipolarity, and enhancing kinetochore targeting. Unexpectedly, robust MCAK microtubule (MT) depolymerization activity is not needed for sperm-induced spindle assembly. However, high activity is necessary for proper physiological MT dynamics as assayed by Ran-induced aster assembly. We propose that MCAK activity is spatially controlled by an interplay between the N- and C-terminal domains during spindle assembly.


Subject(s)
Kinesins/chemistry , Kinesins/metabolism , Microtubules/metabolism , Spindle Apparatus/chemistry , Spindle Apparatus/metabolism , Animals , Cell Extracts , Kinesins/isolation & purification , Male , Microtubules/chemistry , Mutant Proteins/metabolism , Ovum/cytology , Protein Structure, Tertiary , Proto-Oncogene Proteins c-mos/metabolism , Spermatozoa , Xenopus laevis
9.
Nat Commun ; 11(1): 3123, 2020 06 19.
Article in English | MEDLINE | ID: mdl-32561740

ABSTRACT

Intracellular trafficking of organelles, driven by kinesin-1 stepping along microtubules, underpins essential cellular processes. In absence of other proteins on the microtubule surface, kinesin-1 performs micron-long runs. Under crowding conditions, however, kinesin-1 motility is drastically impeded. It is thus unclear how kinesin-1 acts as an efficient transporter in intracellular environments. Here, we demonstrate that TRAK1 (Milton), an adaptor protein essential for mitochondrial trafficking, activates kinesin-1 and increases robustness of kinesin-1 stepping on crowded microtubule surfaces. Interaction with TRAK1 i) facilitates kinesin-1 navigation around obstacles, ii) increases the probability of kinesin-1 passing through cohesive islands of tau and iii) increases the run length of kinesin-1 in cell lysate. We explain the enhanced motility by the observed direct interaction of TRAK1 with microtubules, providing an additional anchor for the kinesin-1-TRAK1 complex. Furthermore, TRAK1 enables mitochondrial transport in vitro. We propose adaptor-mediated tethering as a mechanism regulating kinesin-1 motility in various cellular environments.


Subject(s)
Adaptor Proteins, Vesicular Transport/metabolism , Kinesins/metabolism , Microtubules/metabolism , Mitochondria/metabolism , Adaptor Proteins, Vesicular Transport/genetics , Adaptor Proteins, Vesicular Transport/isolation & purification , Animals , Cell Line, Tumor , Intrinsically Disordered Proteins/genetics , Intrinsically Disordered Proteins/metabolism , Kinesins/genetics , Kinesins/isolation & purification , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Mice , Microscopy, Fluorescence , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , tau Proteins/genetics , tau Proteins/metabolism
10.
J Cell Biol ; 133(3): 595-604, 1996 May.
Article in English | MEDLINE | ID: mdl-8636234

ABSTRACT

We have identified an 80-kD protein that is involved in mitotic spindle elongation in the diatom Cylindrotheca fusiformis. DSK1 (Diatom Spindle Kinesin 1) was isolated using a peptide antibody raised against a conserved region in the motor domain of the kinesin superfamily. By sequence homology, DSK1 belongs to the central motor family of kinesin-related proteins. Immunoblots using an antibody raised against a non-conserved region of DSK1 show that DSK1 is greatly enriched in mitotic spindle preparations. Anti-DSK1 stains in diatom central spindle with a bias toward the midzone, and staining is retained in the spindle midzone during spindle elongation in vitro. Furthermore, preincubation with anti-DSK1 blocks function in an in vitro spindle elongation assay. This inhibition of spindle elongation can be rescued by preincubating concurrently with the fusion protein against which anti-DSK1 was raised. We conclude that DSK1 is involved in spindle elongation and is likely to be responsible for pushing hal-spindles apart in the spindle midzone.


Subject(s)
Anaphase/physiology , Diatoms/chemistry , Kinesins/isolation & purification , Spindle Apparatus/chemistry , Base Sequence , Cloning, Molecular , Kinesins/classification , Kinesins/genetics , Molecular Sequence Data , Sequence Homology, Amino Acid
11.
J Cell Biol ; 128(1-2): 81-94, 1995 Jan.
Article in English | MEDLINE | ID: mdl-7822425

ABSTRACT

Although the overall structures of flagellar and cytoplasmic microtubules are understood, many details have remained a matter of debate. In particular, studies of the arrangement of tubulin subunits have been hampered by the low contrast of the tubulin subunits. This problem can now be addressed by the kinesin decoration technique. We have shown previously that the recombinant kinesin head domain binds to beta-tubulin, thus enhancing the contrast between alpha- and beta-tubulin in the electron microscope; this allows one to study the arrangement of tubulin dimers. Here we describe the lattices of the four different types of microtubules in eukaryotic flagellar axonemes (outer doublet A and B, central pair C1 and C2). They could all be labeled with kinesin head with an 8-nm axial periodicity (the tubulin dimer repeat), and all of them showed the B-surface lattice. This lattice is characterized by a 0.92-nm stagger between adjacent protofilaments. The B-lattice was observed on the axonemal microtubules as well as on extensions made by polymerizing porcine brain tubulin onto axonemal microtubules in the proximal and distal directions. This emphasizes that axonemal microtubules serve as high fidelity templates for seeding microtubules. The presence of a B-lattice implies that there must be a helical discontinuity ("seam") in the wall. This discontinuity is now placed near protofilaments A1 and A2 of the A-tubule, close to the inner junction between A- and B-microtubules. The two junctions differ in structure: the protofilaments of the inner junction (A1-B10) are staggered roughly by half a dimer, those of the outer junction (A10-B1) are roughly in register. Of the two junctions the inner one appears to have the stronger bonds, whereas the outer one is more labile and opens up easily, generating "composite sheets" with chevron patterns from which the polarity can be deduced (arrow in the plus direction). Decorated microtubules have a clear polarity. We find that all flagellar microtubules have the same polarities. The orientation of the dimers is such that the plus end terminates with a crown of alpha subunits, the minus end terminates with beta subunits which thus could be in contact with gamma-tubulin at the nucleation centers.


Subject(s)
Flagella/ultrastructure , Kinesins/ultrastructure , Microtubules/ultrastructure , Sperm Tail/ultrastructure , Animals , Brain , Kinesins/biosynthesis , Kinesins/isolation & purification , Macromolecular Substances , Male , Microscopy, Electron , Models, Structural , Recombinant Proteins/biosynthesis , Recombinant Proteins/isolation & purification , Recombinant Proteins/ultrastructure , Sea Urchins , Swine , Tubulin/ultrastructure
12.
J Cell Biol ; 130(6): 1387-99, 1995 Sep.
Article in English | MEDLINE | ID: mdl-7559760

ABSTRACT

We cloned a new member of the murine brain kinesin superfamily, KIF3B, and found that its amino acid sequence is highly homologous but not identical to KIF3A, which we previously cloned and named KIF3 (47% identical). KIF3B is localized in various organ tissues and developing neurons of mice and accumulates with anterogradely moving membranous organelles after ligation of nerve axons. Immunoprecipitation assay of the brain revealed that KIF3B forms a complex with KIF3A and three other high molecular weight (approximately 100 kD)-associated polypeptides, called the kinesin superfamily-associated protein 3 (KAP3). In vitro reconstruction using baculovirus expression systems showed that KIF3A and KIF3B directly bind with each other in the absence of KAP3. The recombinant KIF3A/B complex (approximately 50-nm rod with two globular heads and a single globular tail) demonstrated plus end-directed microtubule sliding activity in vitro. In addition, we showed that KIF3B itself has motor activity in vitro, by making a complex of wild-type KIF3B and a chimeric motor protein (KIF3B head and KIF3A rod tail). Subcellular fractionation of mouse brain homogenates showed a considerable amount of the native KIF3 complex to be associated with membrane fractions other than synaptic vesicles. Immunoprecipitation by anti-KIF3B antibody-conjugated beads and its electron microscopic study also revealed that KIF3 is associated with membranous organelles. Moreover, we found that the composition of KAP3 is different in the brain and testis. Our findings suggest that KIF3B forms a heterodimer with KIF3A and functions as a new microtubule-based anterograde translocator for membranous organelles, and that KAP3 may determine functional diversity of the KIF3 complex in various kinds of cells in vivo.


Subject(s)
Brain/metabolism , Kinesins/isolation & purification , Microtubules/metabolism , Amino Acid Sequence , Animals , Biological Transport , Cell Membrane/metabolism , Cloning, Molecular , Kinesins/metabolism , Male , Mice , Molecular Sequence Data , Testis/metabolism
13.
J Cell Biol ; 116(4): 957-65, 1992 Feb.
Article in English | MEDLINE | ID: mdl-1734025

ABSTRACT

Kinesin is a mechanochemical enzyme composed of three distinct domains: a globular head domain, a rodlike stalk domain, and a small globular tail domain. The stalk domain has sequence features characteristic of alpha-helical coiled coils. To gain insight into the structure of the kinesin stalk, we expressed it from a segment of the Drosophila melanogaster kinesin heavy chain gene and purified it from Escherichia coli. When observed by EM, this protein formed a rodlike structure 40-55 nm long that was occasionally bent at a hingelike region near the middle of the molecule. An additional EM study and a chemical cross-linking study showed that this protein forms a parallel dimer and that the two chains are in register. Finally, using circular dichroism spectroscopy, we showed that this protein is approximately 55-60% alpha-helical in physiological aqueous solution at 25 degrees C, and approximately 85-90% alpha-helical at 4 degrees C. From these results, we conclude that the stalk of kinesin heavy chain forms an alpha-helical coiled coil structure. The temperature dependence of the circular dichroism signal has two major transitions, at 25-30 degrees C and at 45-50 degrees C, which suggests that a portion of the alpha-helical structure in the stalk is less stable than the rest. By producing the amino-terminal (coil 1) and carboxy-terminal (coil 2) halves of the stalk separately in E. coli, we showed that the region that melts below 30 degrees C lies within coil 1, while the majority of coil 2 melts above 45 degrees C. We suggest that this difference in stability may play a role in the force-generating mechanism or regulation of kinesin.


Subject(s)
Drosophila melanogaster/chemistry , Kinesins/chemistry , Amino Acid Sequence , Animals , Circular Dichroism , Dithionitrobenzoic Acid , Kinesins/isolation & purification , Kinesins/ultrastructure , Microscopy, Electron , Molecular Sequence Data , Protein Conformation , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/isolation & purification , Recombinant Fusion Proteins/ultrastructure , Temperature
14.
J Cell Biol ; 128(5): 761-8, 1995 Mar.
Article in English | MEDLINE | ID: mdl-7876303

ABSTRACT

Microtubule-associated mechanoenzymes have been proposed to play a fundamental role in chromosome movement. We have cloned and characterized the cDNA for a novel protein, named Chromokinesin, that fulfills several of the criteria expected of a mitotic motor. Chromokinesin contains both a kinesin motor-like domain and an unusual basic-leucine zipper DNA-binding domain. Its mRNA is readily detectable in proliferating cells, but not in postmitotic cells. Immunocytochemical analysis with antibodies directed against the nonconserved COOH-terminal region of Chromokinesin indicates that the protein is localized in the nucleus, and primarily associated with chromosome arms in mitotic cells. These data suggest that Chromokinesin is likely to function as a microtubule-based mitotic motor with DNA as its cargo.


Subject(s)
DNA-Binding Proteins/genetics , Kinesins/genetics , Nuclear Proteins/genetics , Amino Acid Sequence , Animals , Base Sequence , Cell Division , Chick Embryo , Chromosomes/physiology , Cloning, Molecular , DNA-Binding Proteins/isolation & purification , Escherichia coli/genetics , Immunohistochemistry , In Situ Hybridization , Kinesins/isolation & purification , Leucine Zippers , Mitosis/physiology , Molecular Sequence Data , Nuclear Proteins/isolation & purification , Polymerase Chain Reaction , Protein Binding , Recombinant Fusion Proteins/biosynthesis , Sequence Homology, Amino Acid
15.
J Cell Biol ; 128(1-2): 95-104, 1995 Jan.
Article in English | MEDLINE | ID: mdl-7822426

ABSTRACT

Using antipeptide antibodies to conserved regions of the kinesin motor domain, we cloned a kinesin-related protein that associates with the centromere region of mitotic chromosomes. We call the protein MCAK, for mitotic centromere-associated kinesin. MCAK appears concentrated on centromeres at prophase and persists until telophase, after which time the localization disperses. It is found throughout the centromere region and between the kinetochore plates of isolated mitotic CHO chromosomes, in contrast to two other kinetochore-associated microtubule motors: cytoplasmic dynein and CENP-E (Yen et al., 1992), which are closer to the outer surface of the kinetochore plates. Sequence analysis shows MCAK to be a kinesin-related protein with the motor domain located in the center of the protein. It is 60-70% similar to kif2, a kinesin-related protein originally cloned from mouse brain with a centrally located motor domain (Aizawa et al., 1992). MCAK protein is present in interphase and mitotic CHO cells and is transcribed as a single 3.4-kb message.


Subject(s)
Centromere/physiology , Centromere/ultrastructure , Kinesins/physiology , Kinetochores/physiology , Amino Acid Sequence , Animals , Base Sequence , Binding Sites , CHO Cells , Chromosomal Proteins, Non-Histone/physiology , Cloning, Molecular , Cricetinae , Dyneins/physiology , Kinesins/chemistry , Kinesins/isolation & purification , Kinetochores/ultrastructure , Mitosis , Molecular Sequence Data , Plasmids , Polymerase Chain Reaction , Protein Structure, Secondary , Reading Frames , Spindle Apparatus/ultrastructure , Subcellular Fractions/metabolism
16.
J Cell Biol ; 127(4): 1041-8, 1994 Nov.
Article in English | MEDLINE | ID: mdl-7525600

ABSTRACT

This paper describes the molecular and biochemical properties of KLP68D, a new kinesin-like motor protein in Drosophila melanogaster. Sequence analysis of a full-length cDNA encoding KLP68D demonstrates that this protein has a domain that shares significant sequence identity with the entire 340-amin acid kinesin heavy chain motor domain. Sequences extending beyond the motor domain predict a region of alpha-helical coiled-coil followed by a globular "tail" region; there is significant sequence similarity between the alpha-helical coiled-coil region of the KLP68D protein and similar regions of the KIF3 protein of mouse and the KRP85 protein of sea urchin. This finding suggests that all three proteins may be members of the same family, and that they all perform related functions. KLP68D protein produced in Escherichia coli is, like kinesin itself, a plus-end directed microtubule motor. In situ hybridization analysis of KLP68D RNA in Drosophila embryos indicates that the KLP68D gene is expressed primarily in the central nervous system and in a subset of the peripheral nervous system during embryogenesis. Thus, KLP68D may be used for anterograde axonal transport and could conceivably move cargoes in fly neurons different than those moved by kinesin heavy chain or other plus-end directed motors.


Subject(s)
Axonal Transport , Drosophila Proteins , Drosophila melanogaster/physiology , Kinesins/biosynthesis , Microtubules/physiology , Nerve Tissue Proteins/biosynthesis , Amino Acid Sequence , Animals , Base Sequence , Drosophila melanogaster/embryology , Embryo, Nonmammalian/physiology , Gene Expression , In Situ Hybridization , Kinesins/chemistry , Kinesins/isolation & purification , Molecular Sequence Data , Nerve Tissue Proteins/chemistry , Nerve Tissue Proteins/isolation & purification , Protein Structure, Secondary , RNA Probes , RNA, Messenger/analysis , RNA, Messenger/biosynthesis
17.
J Cell Biol ; 132(3): 371-80, 1996 Feb.
Article in English | MEDLINE | ID: mdl-8636215

ABSTRACT

The heterotrimeric kinesin-II holoenzyme purified from sea urchin (Strongylocentrotus purpuratus) eggs is assembled from two heterodimerized kinesin-related motor subunits of known sequence, together with a third, previously uncharacterized 115-kD subunit, SpKAP115. Using monospecific anti-SpKAP115 antibodies we have accomplished the molecular cloning and sequencing of the SpKAP115 subunit. The deduced sequence predicts a globular 95-kD non-motor "accessory" polypeptide rich in alpha-helical segments that are generally not predicted to form coiled coils. Electron microscopy of individual rotary shadowed kinesin-II holoenzymes also suggests that SpKAP115 is globular, with a somewhat asymmetric morphology. Moreover, the SpKAP115 subunit lies at one end of the 51-nm-long kinesin-II complex, being separated from the two presumptive motor domains by a approximately 26-nm-long rod, in a manner similar to the light chains (KLCs) of kinesin itself. This indicates that SpKAP115 and the KLCs may have analogous functions, yet SpKAP115 does not display significant sequence similarity with the KLCs. The results show that kinesin and kinesin-II are assembled from highly divergent accessory polypeptides together with kinesin related motor subunits (KRPs) containing conserved motor domains linked to divergent tails. Despite the lack of sequence conservation outside the motor domains, there is striking conservation of the ultrastructure of the kinesin and kinesin-II holoenzymes.


Subject(s)
Calcium-Binding Proteins/biosynthesis , Kinesins/biosynthesis , Muscle Proteins/biosynthesis , Protein Conformation , Amino Acid Sequence , Animals , Calcium-Binding Proteins/chemistry , Calcium-Binding Proteins/isolation & purification , Cloning, Molecular , DNA, Complementary , Kinesins/chemistry , Kinesins/isolation & purification , Macromolecular Substances , Microscopy, Electron , Models, Structural , Molecular Sequence Data , Molecular Weight , Muscle Proteins/chemistry , Muscle Proteins/isolation & purification , Osmolar Concentration , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Sea Urchins
18.
J Cell Biol ; 119(5): 1287-96, 1992 Dec.
Article in English | MEDLINE | ID: mdl-1447303

ABSTRACT

In neuronal axons, various kinds of membranous components are transported along microtubules bidirectionally. However, only two kinds of mechanochemical motor proteins, kinesin and brain dynein, had been identified as transporters of membranous organelles in mammalian neurons. Recently, a series of genes that encode proteins closely related to kinesin heavy chain were identified in several organisms including Schizosaccharomyces pombe, Aspergillus niddulans, Saccharomyces cerevisiae, Caenorhabditus elegans, and Drosophila. Most of these members of the kinesin family are implicated in mechanisms of mitosis or meiosis. To address the mechanism of intracellular organelle transport at a molecular level, we have cloned and characterized five different members (KIF1-5), that encode the microtubule-associated motor domain homologous to kinesin heavy chain, in murine brain tissue. Homology analysis of amino acid sequence indicated that KIF1 and KIF5 are murine counterparts of unc104 and kinesin heavy chain, respectively, while KIF2, KIF3, and KIF4 are as yet unidentified new species. Complete amino acid sequence of KIF3 revealed that KIF3 consists of NH2-terminal motor domain, central alpha-helical rod domain, and COOH-terminal globular domain. Complete amino acid sequence of KIF2 revealed that KIF2 consists of NH2-terminal globular domain, central motor domain, and COOH-terminal alpha-helical rod domain. This is the first identification of the kinesin-related protein which has its motor domain at the central part in its primary structure. Northern blot analysis revealed that KIF1, KIF3, and KIF5 are expressed almost exclusively in murine brain, whereas KIF2 and KIF4 are expressed in brain as well as in other tissues. All these members of the kinesin family are expressed in the same type of neurons, and thus each one of them may transport its specific organelle in the murine central nervous system.


Subject(s)
Brain Chemistry/genetics , Kinesins/genetics , Kinesins/isolation & purification , RNA, Messenger/isolation & purification , Amino Acid Sequence , Animals , Base Sequence , Biological Transport , Cerebellum/anatomy & histology , Cerebellum/chemistry , Gene Expression , Hippocampus/anatomy & histology , Hippocampus/chemistry , Histocytochemistry , Kinesins/biosynthesis , Mice , Molecular Sequence Data , Nucleic Acid Hybridization , Organelles/physiology , Protein Conformation , Sequence Homology, Amino Acid , Tissue Distribution , Transcription, Genetic
19.
J Cell Biol ; 136(4): 859-70, 1997 Feb 24.
Article in English | MEDLINE | ID: mdl-9049251

ABSTRACT

We used a peptide antibody to a conserved sequence in the motor domain of kinesins to screen a Xenopus ovary cDNA expression library. Among the clones isolated were two that encoded a protein we named XCTK2 for Xenopus COOH-terminal kinesin 2. XCTK2 contains an NH2-terminal globular domain, a central alpha-helical stalk, and a COOH-terminal motor domain. XCTK2 is similar to CTKs in other organisms and is most homologous to CHO2. Antibodies raised against XCTK2 recognize a 75-kD protein in Xenopus egg extracts that cosediments with microtubules. In Xenopus tissue culture cells, the anti-XCTK2 antibodies stain mitotic spindles as well as a subset of interphase nuclei. To probe the function of XCTK2, we have used an in vitro assay for spindle assembly in Xenopus egg extracts. Addition of antibodies to cytostatic factor-arrested extracts causes a 70% reduction in the percentage of bipolar spindles formed. XCTK2 is not required for maintenance of bipolar spindles, as antibody addition to preformed spindles has no effect. To further evaluate the function of XCTK2, we expressed XCTK2 in insect Sf-9 cells using the baculovirus expression system. When purified (recombinant XCTK2 is added to Xenopus egg extracts at a fivefold excess over endogenous levels) there is a stimulation in both the rate and extent of bipolar spindle formation. XCTK2 exists in a large complex in extracts and can be coimmunoprecipitated with two other proteins from extracts. XCTK2 likely plays an important role in the establishment and structural integrity of mitotic spindles.


Subject(s)
Kinesins/physiology , Ovum/physiology , Spindle Apparatus/physiology , Xenopus Proteins , Amino Acid Sequence , Animals , Cell Extracts/physiology , Kinesins/chemistry , Kinesins/isolation & purification , Kinesins/metabolism , Macromolecular Substances , Molecular Sequence Data , Ovum/cytology , Spindle Apparatus/drug effects , Spindle Apparatus/metabolism , Xenopus laevis
20.
J Cell Biol ; 129(1): 157-67, 1995 Apr.
Article in English | MEDLINE | ID: mdl-7535303

ABSTRACT

Kinesin is known as a representative cytoskeletal motor protein that is engaged in cell division and axonal transport. In addition to the mutant assay, recent advances using the PCR cloning technique have elucidated the existence of many kinds of kinesin-related proteins in yeast, Drosophila, and mice. We previously cloned five different members of kinesin superfamily proteins (KIFs) in mouse brain (Aizawa, H., Y. Sekine, R. Takemura, Z. Zhang, M. Nangaku, and N. Hirokawa. 1992. J. Cell Biol. 119:1287-1296) and demonstrated that one of them, KIF3A, is an anterograde motor (Kondo, S., R. Sato-Yashitake, Y. Noda, H. Aizawa, T. Nakata, Y. Matsuura, and N. Hirokawa. J. Cell Biol. 1994. 125:1095-1107). We have now characterized another axonal transport motor, KIF2. Different from other KIFs, KIF2 is a central type motor, since its motor domain is located in the center of the molecule. Recombinant KIF2 exists as a dimer with a bigger head and plus-end directionally moves microtubules at a velocity of 0.47 +/- 0.11 microns/s, which is two thirds that of kinesin's. Immunocytological examination showed that native KIF2 is abundant in developing axons and that it accumulates in the proximal region of the ligated nerves after a 20-h ligation. Soluble KIF2 exists without a light chain, and KIF2's associated-vesicles, immunoprecipitated by anti-KIF2 antibody, are different from those carried by existing motors such as kinesin and KIF3A. They are also distinct from synaptic vesicles, although KIF2 is accumulated in so-called synaptic vesicle fractions and embryonal growth cone particles. Our results strongly suggest that KIF2 functions as a new anterograde motor, being specialized for a particular group of membranous organelles involved in fast axonal transport.


Subject(s)
Axons/metabolism , Brain/metabolism , Kinesins/biosynthesis , Microtubules/physiology , Organelles/physiology , Peripheral Nerves/metabolism , Animals , Axonal Transport , Blotting, Western , Cell Line , Cloning, Molecular , Drosophila/physiology , Immunohistochemistry , Kinesins/chemistry , Kinesins/isolation & purification , Kinesins/metabolism , Mice , Microscopy, Electron , Organelles/ultrastructure , Rats , Rats, Wistar , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Spodoptera , Synaptic Vesicles/metabolism , Synaptic Vesicles/ultrastructure , Transfection
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