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1.
Cell ; 185(17): 3059-3065, 2022 08 18.
Article in English | MEDLINE | ID: mdl-35985280

ABSTRACT

Ben Rein is a postdoctoral scholar at Stanford University and a science communicator on social media. In January, 2022, he and his colleagues wrote an open letter to Spotify to combat scientific misinformation. Here, Rein tells his story, sharing thoughts and lessons learned from publishing the open letter.


Subject(s)
Social Media , Communication , Humans , Male , Publishing
2.
Cell ; 184(7): 1654-1656, 2021 04 01.
Article in English | MEDLINE | ID: mdl-33798436

ABSTRACT

Many scientists spend unnecessary time reformatting papers to submit them to different journals. We propose a uniform submission format that we hope journals will include in their options for submission. Widespread adoption of this uniform submission format could shorten the submission and publishing process, freeing up time for research.


Subject(s)
Publishing/standards , Editorial Policies , Research
3.
Cell ; 182(5): 1067-1071, 2020 09 03.
Article in English | MEDLINE | ID: mdl-32888490

ABSTRACT

We can maximize the impact of scientific conferences by uploading all conference presentations, posters, and abstracts to highly trafficked public repositories for each content type. Talks can be hosted on sites like YouTube and Youku, posters can be published on Figshare, and papers and abstracts can become open access preprints.


Subject(s)
Congresses as Topic , Publishing , Science/methods , Social Media
5.
Mol Cell ; 83(3): 315-316, 2023 02 02.
Article in English | MEDLINE | ID: mdl-36736303

ABSTRACT

Models, like the Central Dogma, are a core feature of many papers we publish, yet their utility can be undermined when they are either overly simplistic or overly complicated, and it can contribute to misunderstandings when key details or limitations are left out. In this editorial, we connect different versions of the Central Dogma and how we think about scientific models more generally.


Subject(s)
Models, Theoretical , Publishing
6.
Genes Dev ; 37(1-2): 2-3, 2023 01 01.
Article in English | MEDLINE | ID: mdl-37061960

ABSTRACT

GUEST EDITOR.


Subject(s)
Communication , Publishing
7.
Cell ; 183(3): 555, 2020 10 29.
Article in English | MEDLINE | ID: mdl-33125877

Subject(s)
Perception , Publishing , Racism
8.
Cell ; 159(1): 5-8, 2014 Sep 25.
Article in English | MEDLINE | ID: mdl-25259912

ABSTRACT

Hiring committees address the glut of highly qualified applicants for faculty positions by experimenting with new evaluation methods and adapting their expectations for today's increasingly competitive academic environment.


Subject(s)
Cell Biology , Molecular Biology , Research Personnel , Universities , Cell Biology/trends , Job Application , Molecular Biology/education , Molecular Biology/trends , Publishing
9.
Nature ; 613(7942): 138-144, 2023 01.
Article in English | MEDLINE | ID: mdl-36600070

ABSTRACT

Theories of scientific and technological change view discovery and invention as endogenous processes1,2, wherein previous accumulated knowledge enables future progress by allowing researchers to, in Newton's words, 'stand on the shoulders of giants'3-7. Recent decades have witnessed exponential growth in the volume of new scientific and technological knowledge, thereby creating conditions that should be ripe for major advances8,9. Yet contrary to this view, studies suggest that progress is slowing in several major fields10,11. Here, we analyse these claims at scale across six decades, using data on 45 million papers and 3.9 million patents from six large-scale datasets, together with a new quantitative metric-the CD index12-that characterizes how papers and patents change networks of citations in science and technology. We find that papers and patents are increasingly less likely to break with the past in ways that push science and technology in new directions. This pattern holds universally across fields and is robust across multiple different citation- and text-based metrics1,13-17. Subsequently, we link this decline in disruptiveness to a narrowing in the use of previous knowledge, allowing us to reconcile the patterns we observe with the 'shoulders of giants' view. We find that the observed declines are unlikely to be driven by changes in the quality of published science, citation practices or field-specific factors. Overall, our results suggest that slowing rates of disruption may reflect a fundamental shift in the nature of science and technology.


Subject(s)
Inventions , Patents as Topic , Research Report , Technology , Humans , Inventions/statistics & numerical data , Inventions/trends , Research Personnel , Technology/statistics & numerical data , Technology/trends , Patents as Topic/statistics & numerical data , Research Report/trends , Datasets as Topic , Publishing/statistics & numerical data , Publishing/trends , Time Factors , Diffusion of Innovation
10.
Nat Methods ; 21(2): 170-181, 2024 Feb.
Article in English | MEDLINE | ID: mdl-37710020

ABSTRACT

Images document scientific discoveries and are prevalent in modern biomedical research. Microscopy imaging in particular is currently undergoing rapid technological advancements. However, for scientists wishing to publish obtained images and image-analysis results, there are currently no unified guidelines for best practices. Consequently, microscopy images and image data in publications may be unclear or difficult to interpret. Here, we present community-developed checklists for preparing light microscopy images and describing image analyses for publications. These checklists offer authors, readers and publishers key recommendations for image formatting and annotation, color selection, data availability and reporting image-analysis workflows. The goal of our guidelines is to increase the clarity and reproducibility of image figures and thereby to heighten the quality and explanatory power of microscopy data.


Subject(s)
Checklist , Publishing , Reproducibility of Results , Image Processing, Computer-Assisted , Microscopy
11.
PLoS Biol ; 22(7): e3002715, 2024 Jul.
Article in English | MEDLINE | ID: mdl-39042591

ABSTRACT

Awards can propel academic careers. They also reflect the culture and values of the scientific community. But do awards incentivize greater transparency, inclusivity, and openness in science? Our cross-disciplinary survey of 222 awards for the "best" journal articles across all 27 SCImago subject areas revealed that journals and learned societies administering such awards generally publish little detail on their procedures and criteria. Award descriptions were brief, rarely including contact details or information on the nominations pool. Nominations of underrepresented groups were not explicitly encouraged, and concepts that align with Open Science were almost absent from the assessment criteria. At the same time, 10% of awards, especially the recently established ones, tended to use article-level impact metrics. USA-affiliated researchers dominated the winner's pool (48%), while researchers from the Global South were uncommon (11%). Sixty-one percent of individual winners were men. Overall, Best Paper awards miss the global calls for greater transparency and equitable access to academic recognition. We provide concrete and implementable recommendations for scientific awards to improve the scientific recognition system and incentives for better scientific practice.


Subject(s)
Awards and Prizes , Humans , Research Personnel , Male , Female , Science , Publishing/standards , Periodicals as Topic/standards
12.
Proc Natl Acad Sci U S A ; 121(21): e2322462121, 2024 May 21.
Article in English | MEDLINE | ID: mdl-38758699

ABSTRACT

While scientific researchers often aim for high productivity, prioritizing the quantity of publications may come at the cost of time and effort dedicated to individual research. It is thus important to examine the relationship between productivity and disruption for individual researchers. Here, we show that with the increase in the number of published papers, the average citation per paper will be higher yet the mean disruption of papers will be lower. In addition, we find that the disruption of scientists' papers may decrease when they are highly productive in a given year. The disruption of papers in each year is not determined by the total number of papers published in the author's career, but rather by the productivity of that particular year. Besides, more productive authors also tend to give references to recent and high-impact research. Our findings highlight the potential risks of pursuing productivity and aim to encourage more thoughtful career planning among scientists.


Subject(s)
Publishing , Research Personnel , Publishing/statistics & numerical data , Humans , Efficiency , Journal Impact Factor , Bibliometrics
13.
Proc Natl Acad Sci U S A ; 121(32): e2402646121, 2024 Aug 06.
Article in English | MEDLINE | ID: mdl-39074264

ABSTRACT

Despite the long-standing calls for increased levels of interdisciplinary research as a way to address society's grand challenges, most science is still disciplinary. To understand the slow rate of convergence to more interdisciplinary research, we examine 154,021 researchers who received a PhD in a biomedical field between 1970 and 2013, measuring the interdisciplinarity of their articles using the disciplinary composition of references. We provide a range of evidence that interdisciplinary research is impactful, but that those who conduct it face early career impediments. The researchers who are initially the most interdisciplinary tend to stop publishing earlier in their careers-it takes about 8 y for half of the researchers in the top percentile in terms of initial interdisciplinarity to stop publishing, compared to more than 20 y for moderately interdisciplinary researchers (10th to 75th percentiles). Moreover, perhaps in response to career challenges, initially interdisciplinary researchers on average decrease their interdisciplinarity over time. These forces reduce the stock of interdisciplinary researchers who can train future cohorts. Indeed, new graduates tend to be less interdisciplinary than the stock of active researchers. We show that interdisciplinarity does increase over time despite these dampening forces because initially disciplinary researchers become more interdisciplinary as their careers progress.


Subject(s)
Biomedical Research , Interdisciplinary Research , Humans , Research Personnel , Career Choice , Career Mobility , Publishing/statistics & numerical data
14.
PLoS Biol ; 21(1): e3002011, 2023 01.
Article in English | MEDLINE | ID: mdl-36706134

ABSTRACT

PLOS began publishing influential open access science in 2003. As PLOS Biology enters its third decade, we reflect on our mission, what has changed, what remains to be done and our wishes for the future.


Subject(s)
Biology , Publishing , Forecasting
15.
PLoS Biol ; 21(10): e3002377, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37856555

ABSTRACT

Twenty years ago this month, PLOS Biology was launched, helping to catalyze a movement that has transformed publishing in the life sciences. In this issue, we explore how the community can continue innovating for positive change in the next decades.


Subject(s)
Biological Science Disciplines , Publishing , Biology
16.
PLoS Biol ; 21(10): e3002234, 2023 10.
Article in English | MEDLINE | ID: mdl-37788235

ABSTRACT

Academic journals have been publishing the results of biomedical research for more than 350 years. Reviewing their history reveals that the ways in which journals vet submissions have changed over time, culminating in the relatively recent appearance of the current peer-review process. Journal brand and Impact Factor have meanwhile become quality proxies that are widely used to filter articles and evaluate scientists in a hypercompetitive prestige economy. The Web created the potential for a more decoupled publishing system in which articles are initially disseminated by preprint servers and then undergo evaluation elsewhere. To build this future, we must first understand the roles journals currently play and consider what types of content screening and review are necessary and for which papers. A new, open ecosystem involving preprint servers, journals, independent content-vetting initiatives, and curation services could provide more multidimensional signals for papers and avoid the current conflation of trust, quality, and impact. Academia should strive to avoid the alternative scenario, however, in which stratified publisher silos lock in submissions and simply perpetuate this conflation.


Subject(s)
Biomedical Research , Ecosystem , Publishing , Peer Review
17.
PLoS Biol ; 21(11): e3002376, 2023 Nov.
Article in English | MEDLINE | ID: mdl-37971964

ABSTRACT

Uniformly accessible DNA sequences are needed to improve experimental reproducibility and automation. Rather than descriptions of how engineered DNA is assembled, publishers should require complete and empirically validated sequences.


Subject(s)
DNA , Publishing , Reproducibility of Results , Base Sequence , DNA/genetics , Automation
18.
Nat Rev Mol Cell Biol ; 15(10): 690-8, 2014 10.
Article in English | MEDLINE | ID: mdl-25245078

ABSTRACT

Biologists regularly face an increasingly difficult task - to effectively communicate bigger and more complex structural data using an ever-expanding suite of visualization tools. Whether presenting results to peers or educating an outreach audience, a scientist can achieve maximal impact with minimal production time by systematically identifying an audience's needs, planning solutions from a variety of visual communication techniques and then applying the most appropriate software tools. A guide to available resources that range from software tools to professional illustrators can help researchers to generate better figures and presentations tailored to any audience's needs, and enable artistically inclined scientists to create captivating outreach imagery.


Subject(s)
Information Dissemination , Models, Molecular , Protein Conformation , Databases, Protein , Molecular Structure , Publishing
19.
Cell ; 164(6): 1092-1093, 2016 Mar 10.
Article in English | MEDLINE | ID: mdl-26967274
20.
Cell ; 164(6): 1079-1081, 2016 Mar 10.
Article in English | MEDLINE | ID: mdl-26967270
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