Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 48
Filter
Add more filters

Publication year range
1.
Nat Immunol ; 13(5): 481-90, 2012 May.
Article in English | MEDLINE | ID: mdl-22484734

ABSTRACT

The maintenance of immune homeostasis requires regulatory T cells (Treg cells). Here we found that Treg cell­specific ablation of Ubc13, a Lys63 (K63)-specific ubiquitin-conjugating enzyme, caused aberrant T cell activation and autoimmunity. Although Ubc13 deficiency did not affect the survival of Treg cells or expression of the transcription factor Foxp3, it impaired the in vivo suppressive function of Treg cells and rendered them sensitive to the acquisition of T helper type 1 (TH1) cell­ and interleukin 17 (IL-17)-producing helper T (TH17) cell­like effector phenotypes. This function of Ubc13 involved its downstream target, the kinase IKK. The Ubc13-IKK signaling axis controlled the expression of specific Treg cell effector molecules, including IL-10 and SOCS1. Collectively, our findings suggest that the Ubc13-IKK signaling axis regulates the molecular program that maintains Treg cell function and prevents Treg cells from acquiring inflammatory phenotypes.


Subject(s)
Autoimmunity/immunology , Cell Differentiation/immunology , I-kappa B Kinase/metabolism , T-Lymphocytes, Regulatory/immunology , Ubiquitin-Conjugating Enzymes/immunology , Animals , Forkhead Transcription Factors/immunology , Forkhead Transcription Factors/metabolism , I-kappa B Kinase/deficiency , I-kappa B Kinase/immunology , Interleukin-10/immunology , Interleukin-10/metabolism , Interleukin-17/immunology , Interleukin-17/metabolism , Lymphocyte Activation/immunology , Mice , Mice, Inbred C57BL , Mice, Transgenic , Signal Transduction/immunology , Suppressor of Cytokine Signaling 1 Protein , Suppressor of Cytokine Signaling Proteins/immunology , Suppressor of Cytokine Signaling Proteins/metabolism , T-Lymphocytes, Regulatory/cytology , Th1 Cells/cytology , Th1 Cells/immunology , Th17 Cells/cytology , Th17 Cells/immunology , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/metabolism
2.
Mol Cell ; 63(5): 753-67, 2016 09 01.
Article in English | MEDLINE | ID: mdl-27570074

ABSTRACT

ER-associated degradation (ERAD) is essential for protein quality control in the ER, not only when the ER is stressed, but also at steady state. We report a new layer of homeostatic control, in which ERAD activity itself is regulated posttranscriptionally and independently of the unfolded protein response by adjusting the endogenous levels of EDEM1, OS-9, and SEL1L (ERAD enhancers). Functional UBC6e requires its precise location in the ER to form a supramolecular complex with Derlin2. This complex targets ERAD enhancers for degradation, a function that depends on UBC6e's enzymatic activity. Ablation of UBC6e causes upregulation of active ERAD enhancers and so increases clearance not only of terminally misfolded substrates, but also of wild-type glycoproteins that fold comparatively slowly in vitro and in vivo. The levels of proteins that comprise the ERAD machinery are thus carefully tuned and adjusted to prevailing needs.


Subject(s)
Endoplasmic Reticulum/metabolism , Lectins/genetics , Membrane Proteins/genetics , Neoplasm Proteins/genetics , Protein Processing, Post-Translational , Proteins/genetics , Ubiquitin-Conjugating Enzymes/genetics , Animals , Endoplasmic Reticulum-Associated Degradation , Fibroblasts/cytology , Fibroblasts/metabolism , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Glycosylation , HEK293 Cells , Humans , Lectins/metabolism , Lentivirus/genetics , Lentivirus/metabolism , Membrane Proteins/metabolism , Mice , Neoplasm Proteins/metabolism , Proteins/metabolism , Proteolysis , Ubiquitin-Conjugating Enzymes/deficiency , Unfolded Protein Response
3.
J Immunol ; 206(10): 2376-2385, 2021 05 15.
Article in English | MEDLINE | ID: mdl-33893171

ABSTRACT

NLRP3 inflammasome plays an important role in innate immune system through recognizing pathogenic microorganisms and danger-associated molecules. Deubiquitination of NLRP3 has been shown to be essential for its activation, yet the functions of Ubc13, the K63-linked specific ubiquitin-conjugating enzyme E2, in NLRP3 inflammasome activation are not known. In this study, we found that in mouse macrophages, Ubc13 knockdown or knockout dramatically impaired NLRP3 inflammasome activation. Catalytic activity is required for Ubc13 to control NLRP3 activation, and Ubc13 pharmacological inhibitor significantly attenuates NLRP3 inflammasome activation. Mechanistically, Ubc13 associates with NLRP3 and promotes its K63-linked polyubiquitination. Through mass spectrum and biochemical analysis, we identified lysine 565 and lysine 687 as theK63-linked polyubiquitination sites of NLRP3. Collectively, our data suggest that Ubc13 potentiates NLRP3 inflammasome activation via promoting site-specific K63-linked ubiquitination of NLRP3. Our study sheds light on mechanisms of NLRP3 inflammasome activation and identifies that targeting Ubc13 could be an effective therapeutic strategy for treating aberrant NLRP3 inflammasome activation-induced pathogenesis.


Subject(s)
Inflammasomes/metabolism , Lysine/metabolism , Macrophages/metabolism , NLR Family, Pyrin Domain-Containing 3 Protein/metabolism , Polyubiquitin/metabolism , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitination/genetics , Animals , HEK293 Cells , Humans , Inflammasomes/immunology , Macrophages/immunology , Mice , Mice, Transgenic , NLR Family, Pyrin Domain-Containing 3 Protein/genetics , Protein Binding , Transfection , Ubiquitin-Conjugating Enzymes/antagonists & inhibitors , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitination/drug effects
4.
Development ; 146(23)2019 12 02.
Article in English | MEDLINE | ID: mdl-31704792

ABSTRACT

The number and quality of oocytes within the ovarian reserve largely determines fertility and reproductive lifespan in mammals. An oocyte-specific transcription factor cascade controls oocyte development, and some of these transcription factors, such as newborn ovary homeobox gene (NOBOX), are candidate genes for primary ovarian insufficiency in women. Transcription factors are frequently modified by the post-translational modification SUMOylation, but it is not known whether SUMOylation is required for function of the oocyte-specific transcription factors or if SUMOylation is required in oocytes during their development within the ovarian follicle. To test this, the sole E2 SUMO-conjugating enzyme, Ube2i, was ablated in mouse oocytes beginning in primordial follicles. Loss of oocyte Ube2i resulted in female infertility with major defects in stability of the primordial follicle pool, ovarian folliculogenesis, ovulation and meiosis. Transcriptomic profiling of ovaries suggests that loss of oocyte Ube2i caused defects in both oocyte- and granulosa cell-expressed genes, including NOBOX and some of its known target genes. Together, these studies show that SUMOylation is required in the mammalian oocyte during folliculogenesis for both oocyte development and communication with ovarian somatic cells.


Subject(s)
Cell Communication , Granulosa Cells , Infertility, Female , Oocytes/metabolism , Sumoylation , Ubiquitin-Conjugating Enzymes/deficiency , Animals , Female , Gene Expression Regulation, Developmental , Granulosa Cells/metabolism , Granulosa Cells/pathology , Infertility, Female/embryology , Infertility, Female/genetics , Infertility, Female/pathology , Mice , Mice, Knockout , Oocytes/pathology , Ubiquitin-Conjugating Enzymes/metabolism
5.
BMC Cancer ; 21(1): 1012, 2021 Sep 09.
Article in English | MEDLINE | ID: mdl-34503444

ABSTRACT

BACKGROUND: UEV1A encodes a ubiquitin-E2 variant closely associated with tumorigenesis and metastasis, but its underlying mechanism in promoting metastasis remains to be investigated. METHODS: In this study, we experimentally manipulated UEV1A and CT45A gene expression and monitored their effects on cancer-related gene expression, cell migration and the signal transduction cascade. RESULTS: It was found that UEV1A overexpression induces CT45A family gene expression in breast cancer cells. Indeed, ectopic expression of UEV1A was sufficient to induce CT45A and its downstream genes involved in tumorigenesis, epithelial-mesenchymal transition (EMT), stemness and metastasis, and to promote cell migration and EMT signaling. Consistently, depletion of CT45A abolished the above effects, indicating that CT45A is a critical downstream effector of Uev1A. The Uev1A-induced cell migration and EMT signaling was dependent on AKT but independent of NF-κB, indicating that CT45A acts downstream of the AKT pathway. CONCLUSIONS: Based on previous reports and observations in this study, we propose that the Ubc13-Uev1A complex activates AKT through K63-linked polyubiquitination, which leads to enhanced CT45A expression, stimulated cell migration and EMT signaling in breast cells. Since similar effects were also observed in a colorectal cancer cell line, the Ubc13/Uev1A-AKT-CT45A axis may also promote tumorigenesis and metastasis in other tissues.


Subject(s)
Antigens, Neoplasm/metabolism , Breast Neoplasms/metabolism , Cell Movement , Proto-Oncogene Proteins c-akt/metabolism , Transcription Factors/metabolism , Ubiquitin-Conjugating Enzymes/metabolism , Antigens, Neoplasm/genetics , Breast Neoplasms/genetics , Breast Neoplasms/pathology , Epithelial-Mesenchymal Transition/genetics , Female , Gene Expression Regulation, Neoplastic , HCT116 Cells/metabolism , HCT116 Cells/pathology , Humans , MCF-7 Cells , Microarray Analysis , NF-kappa B , Neoplastic Stem Cells , Proto-Oncogene Proteins c-akt/genetics , Signal Transduction/physiology , Transcription Factors/deficiency , Transcription Factors/genetics , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitination , Up-Regulation
6.
Biochem Biophys Res Commun ; 531(3): 402-408, 2020 10 20.
Article in English | MEDLINE | ID: mdl-32868078

ABSTRACT

Presbycusis is a form of age-related hearing loss (AHL). Many studies have shown that the degeneration of various structures in the cochlea of the inner ear is related to AHL, and DNA damage is an important factor leading to the above process. As an E2 ubiquitin-conjugated enzyme, RAD6B plays an important role in DNA damage repair (DDR) through histone ubiquitination. However, the molecular mechanism is still unclear. In this study, we investigated the role of RAD6B in the morphological changes and DDR mechanisms in aging-related degeneration of the cochlea of mice. We observed that the hair cells, stria vascularis and spiral ganglion in the cochlea of the RAD6B knockout mice showed significant degenerative changes and abnormal expression of proteins associated with DDR mechanisms compared with those of the littermate wild-type mice. In conclusion, our results suggest that the deletion of RAD6B may lead to abnormalities in DDR, thereby accelerating the degeneration of various structures in the cochlea and senescence and apoptosis of cochlea cells.


Subject(s)
Aging/pathology , Cochlea/metabolism , Cochlea/pathology , Ubiquitin-Conjugating Enzymes/deficiency , Animals , Apoptosis , Caspase 3/metabolism , Cell Line , Cyclin-Dependent Kinase Inhibitor p16/metabolism , Cyclin-Dependent Kinase Inhibitor p21/metabolism , DNA Damage , DNA Repair , Histones/metabolism , Mice, Knockout , Tumor Suppressor Protein p53/metabolism , Ubiquitin-Conjugating Enzymes/metabolism
7.
Cytogenet Genome Res ; 160(5): 245-254, 2020.
Article in English | MEDLINE | ID: mdl-32485717

ABSTRACT

Chromosomal microdeletion syndromes present with a wide spectrum of clinical phenotypes that depend on the size and gene content of the affected region. In a healthy carrier, epigenetic mechanisms may compensate for the same microdeletion, which may segregate through several generations without any clinical symptoms until the epigenetic modifications no longer function. We report 2 novel cases of Xq24 microdeletions inherited from mothers with extremely skewed X-chromosome inactivation (sXCI). The first case is a boy presenting with X-linked mental retardation, Nascimento type, due to a 168-kb Xq24 microdeletion involving 5 genes (CXorf56, UBE2A, NKRF, SEPT6, and MIR766) inherited from a healthy mother and grandmother with sXCI. In the second family, the presence of a 239-kb Xq24 microdeletion involving 3 additional genes (SLC25A43, SLC25A5-AS1, and SLC25A5) was detected in a woman with sXCI and a history of recurrent pregnancy loss with a maternal family history without reproductive wastages or products of conception. These cases provide evidence that women with an Xq24 microdeletion and sXCI may be at risk for having a child with intellectual disability or for experiencing a pregnancy loss due to the ontogenetic pleiotropy of a chromosomal microdeletion and its incomplete penetrance modified by sXCI.


Subject(s)
Abortion, Habitual/genetics , Chromosome Deletion , Chromosomes, Human, X/genetics , Mothers , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics , X Chromosome Inactivation/genetics , Adult , Child, Preschool , Epigenesis, Genetic , Female , Humans , Infant , Infant, Newborn , Intellectual Disability/genetics , Male , Phenotype , Syndrome , Young Adult
8.
Hum Mol Genet ; 25(1): 1-8, 2016 Jan 01.
Article in English | MEDLINE | ID: mdl-26476408

ABSTRACT

UBE2A deficiency syndrome (also known as X-linked intellectual disability type Nascimento) is an intellectual disability syndrome characterized by prominent dysmorphic features, impaired speech and often epilepsy. The syndrome is caused by Xq24 deletions encompassing the UBE2A (HR6A) gene or by intragenic UBE2A mutations. UBE2A encodes an E2 ubiquitin-conjugating enzyme involved in DNA repair and female fertility. A recent study in Drosophila showed that dUBE2A binds to the E3 ligase Parkin, which is required for mitochondrial function and responsible for juvenile Parkinson's disease. In addition, these studies showed impairments in synaptic transmission in dUBE2A mutant flies. However, a causal role of UBE2A in of cognitive deficits has not yet been established. Here, we show that Ube2a knockout mice have a major deficit in spatial learning tasks, whereas other tested phenotypes, including epilepsy and motor coordination, were normal. Results from electrophysiological measurements in the hippocampus showed no deficits in synaptic transmission nor in the ability to induce long-term synaptic potentiation. However, a small but significant deficit was observed in mGLUR-dependent long-term depression, a pathway previously implied in several other mouse models for neurodevelopmental disorders. Our results indicate a causal role of UBE2A in learning and mGLUR-dependent long-term depression, and further indicate that the Ube2a knockout mouse is a good model to study the molecular mechanisms underlying UBE2A deficiency syndrome.


Subject(s)
Learning/physiology , Long-Term Synaptic Depression/physiology , Memory/physiology , Neuronal Plasticity/physiology , Ubiquitin-Conjugating Enzymes/physiology , Animals , Genetic Diseases, X-Linked/genetics , Hippocampus/physiology , Intellectual Disability/genetics , Long-Term Potentiation , Male , Mice , Mice, Knockout , Mutation , Receptors, Metabotropic Glutamate/metabolism , Social Behavior , Synaptic Transmission/physiology , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics
9.
Am J Med Genet A ; 176(3): 722-726, 2018 Mar.
Article in English | MEDLINE | ID: mdl-29283210

ABSTRACT

UBE2A deficiency is a syndromic condition of X-linked intellectual disability (ID) characterized by typical dysmorphic features that include synophrys, prominent supraorbital ridges, almond-shaped, and deep-set eyes, large ears, wide mouth, myxedematous appearance, hirsutism, micropenis, and onychodystrophy. To date, only seven familial UBE2A intragenic mutations and nine larger microdeletions encompassing UBE2A have been reported. Here, we describe two siblings with X-linked ID and typical clinical features of UBE2A deficiency caused by a novel hemizygous variant, identified by massively parallel sequencing of X-exome. The synonymous c.330G>A substitution in UBE2A modifies the last nucleotide of exon 5, causing the exon skipping and resulting in an out-of-frame transcript, likely encoding for a truncated form of the ubiquitin-conjugating enzyme E2 A. As confirmed by deep sequencing, the c.330G>A substitution in UBE2A was undetectable in genomic DNA from maternal blood cells, suggesting that the recurrent UBE2A deficiency observed in males of this family is caused by a maternal germline mosaicism.


Subject(s)
Genetic Association Studies , Genetic Predisposition to Disease , Siblings , Ubiquitin-Conjugating Enzymes/deficiency , Adult , Alternative Splicing , Chromosomes, Human, X , Comparative Genomic Hybridization , DNA Mutational Analysis , Facies , Genetic Association Studies/methods , Germ-Line Mutation , Humans , Male , Maternal Inheritance , Mosaicism , Pedigree , Sequence Analysis, DNA
10.
Arterioscler Thromb Vasc Biol ; 37(9): 1646-1656, 2017 09.
Article in English | MEDLINE | ID: mdl-28684613

ABSTRACT

OBJECTIVE: Impaired endothelial cell (EC) autophagy compromises shear stress-induced nitric oxide (NO) generation. We determined the responsible mechanism. APPROACH AND RESULTS: On autophagy compromise in bovine aortic ECs exposed to shear stress, a decrease in glucose uptake and EC glycolysis attenuated ATP production. We hypothesized that decreased glycolysis-dependent purinergic signaling via P2Y1 (P2Y purinoceptor 1) receptors, secondary to impaired autophagy in ECs, prevents shear-induced phosphorylation of eNOS (endothelial nitric oxide synthase) at its positive regulatory site S1117 (p-eNOSS1177) and NO generation. Maneuvers that restore glucose transport and glycolysis (eg, overexpression of GLUT1 [glucose transporter 1]) or purinergic signaling (eg, addition of exogenous ADP) rescue shear-induced p-eNOSS1177 and NO production in ECs with impaired autophagy. Conversely, inhibiting glucose transport via GLUT1 small interfering RNA, blocking purinergic signaling via ectonucleotidase-mediated ATP/ADP degradation (eg, apyrase), or inhibiting P2Y1 receptors using pharmacological (eg, MRS2179 [2'-deoxy-N6-methyladenosine 3',5'-bisphosphate tetrasodium salt]) or genetic (eg, P2Y1-receptor small interfering RNA) procedures inhibit shear-induced p-eNOSS1177 and NO generation in ECs with intact autophagy. Supporting a central role for PKCδT505 (protein kinase C delta T505) in relaying the autophagy-dependent purinergic-mediated signal to eNOS, we find that (1) shear stress-induced activating phosphorylation of PKCδT505 is negated by inhibiting autophagy, (2) shear-induced p-eNOSS1177 and NO generation are restored in autophagy-impaired ECs via pharmacological (eg, bryostatin) or genetic (eg, constitutively active PKCδ) activation of PKCδT505, and (3) pharmacological (eg, rottlerin) and genetic (eg, PKCδ small interfering RNA) PKCδ inhibition prevents shear-induced p-eNOSS1177 and NO generation in ECs with intact autophagy. Key nodes of dysregulation in this pathway on autophagy compromise were revealed in human arterial ECs. CONCLUSIONS: Targeted reactivation of purinergic signaling and PKCδ has strategic potential to restore compromised NO generation in pathologies associated with suppressed EC autophagy.


Subject(s)
Adenosine Triphosphate/metabolism , Autophagy , Endothelial Cells/enzymology , Glycolysis , Mechanotransduction, Cellular , Nitric Oxide Synthase Type III/metabolism , Nitric Oxide/metabolism , Receptors, Purinergic P2Y1/metabolism , Animals , Autophagy/drug effects , Autophagy-Related Proteins/deficiency , Autophagy-Related Proteins/genetics , Cattle , Cells, Cultured , Endothelial Cells/drug effects , Endothelial Cells/pathology , Glucose Transporter Type 1/genetics , Glucose Transporter Type 1/metabolism , Glycolysis/drug effects , Humans , Mechanotransduction, Cellular/drug effects , Mice, Inbred C57BL , Mice, Knockout , Phosphorylation , Protein Kinase C-delta/antagonists & inhibitors , Protein Kinase C-delta/genetics , Protein Kinase C-delta/metabolism , Protein Kinase Inhibitors/pharmacology , Purinergic P2Y Receptor Antagonists/pharmacology , RNA Interference , Reactive Oxygen Species/metabolism , Receptors, Purinergic P2Y1/drug effects , Receptors, Purinergic P2Y1/genetics , Serine , Stress, Mechanical , Transfection , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics
11.
J Biol Chem ; 291(6): 3030-42, 2016 Feb 05.
Article in English | MEDLINE | ID: mdl-26601958

ABSTRACT

UBE2W ubiquitinates N termini of proteins rather than internal lysine residues, showing a preference for substrates with intrinsically disordered N termini. The in vivo functions of this intriguing E2, however, remain unknown. We generated Ube2w germ line KO mice that proved to be susceptible to early postnatal lethality without obvious developmental abnormalities. Although the basis of early death is uncertain, several organ systems manifest changes in Ube2w KO mice. Newborn Ube2w KO mice often show altered epidermal maturation with reduced expression of differentiation markers. Mirroring higher UBE2W expression levels in testis and thymus, Ube2w KO mice showed a disproportionate decrease in weight of these two organs (~50%), suggesting a functional role for UBE2W in the immune and male reproductive systems. Indeed, Ube2w KO mice displayed sustained neutrophilia accompanied by increased G-CSF signaling and testicular vacuolation associated with decreased fertility. Proteomic analysis of a vulnerable organ, presymptomatic testis, showed a preferential accumulation of disordered proteins in the absence of UBE2W, consistent with the view that UBE2W preferentially targets disordered polypeptides. These mice further allowed us to establish that UBE2W is ubiquitously expressed as a single isoform localized to the cytoplasm and that the absence of UBE2W does not alter cell viability in response to various stressors. Our results establish that UBE2W is an important, albeit not essential, protein for early postnatal survival and normal functioning of multiple organ systems.


Subject(s)
Epidermis , Skin Abnormalities , Ubiquitin-Conjugating Enzymes , Animals , Epidermis/abnormalities , Epidermis/enzymology , Epidermis/immunology , Leukocyte Disorders/congenital , Leukocyte Disorders/enzymology , Leukocyte Disorders/genetics , Leukocyte Disorders/immunology , Male , Mice , Mice, Knockout , Skin Abnormalities/enzymology , Skin Abnormalities/genetics , Skin Abnormalities/immunology , Testis/enzymology , Testis/immunology , Thymus Gland/enzymology , Thymus Gland/immunology , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/immunology
12.
J Biol Chem ; 289(50): 34490-502, 2014 Dec 12.
Article in English | MEDLINE | ID: mdl-25320092

ABSTRACT

ER-resident proteins destined for degradation are dislocated into the cytosol by components of the ER quality control machinery for proteasomal degradation. Dislocation substrates are ubiquitylated in the cytosol by E2 ubiquitin-conjugating/E3 ligase complexes. UBE2J1 is one of the well-characterized E2 enzymes that participate in this process. However, the physiological function of Ube2j1 is poorly defined. We find that Ube2j1(-/-) mice have reduced viability and fail to thrive early after birth. Male Ube2j1(-/-) mice are sterile due to a defect in late spermatogenesis. Ultrastructural analysis shows that removal of the cytoplasm is incomplete in Ube2j1(-/-) elongating spermatids, compromising the release of mature elongate spermatids into the lumen of the seminiferous tubule. Our findings identify an essential function for the ubiquitin-proteasome-system in spermiogenesis and define a novel, non-redundant physiological function for the dislocation step of ER quality control.


Subject(s)
Spermatogenesis , Ubiquitin-Conjugating Enzymes/metabolism , Animals , B-Lymphocytes/immunology , B-Lymphocytes/metabolism , Cell Line , Endoplasmic Reticulum/metabolism , Immunoglobulins/metabolism , Infertility, Male/metabolism , Infertility, Male/pathology , Male , Mice , Spermatids/cytology , Spermatids/pathology , Ubiquitin-Conjugating Enzymes/deficiency , Unfolded Protein Response , Up-Regulation
13.
Am J Med Genet A ; 167A(1): 204-10, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25287747

ABSTRACT

Intragenic mutations of the UBE2A gene, as well as larger deletions of Xq24 encompassing UBE2A have in recent years been associated with a syndromic form of X-linked intellectual disability called UBE2A deficiency syndrome or X-linked intellectual disability type Nascimento (OMIM#300860). Common clinical features in these patients include moderate to severe intellectual disability (ID), heart defects, dysmorphic features such as high forehead, synophrys, prominent supraorbital ridges, almond-shaped and deep-set eyes, wide mouth, myxedematous appearance, hirsutism, onychodystrophy, and genital anomalies. This study investigates clinical and molecular data of two unrelated, affected males with chromosome Xq24 deletions encompassing UBE2A. Both have been followed from birth until two years of age. A review of the previously published patients with deletions encompassing UBE2A is provided. Besides the common features, the two boys show anomalies not previously described, such as retinal coloboma, esophageal atresia with esophageal fistula, long fingers, camptodactyly, clinodactyly, and long broad toes. Analyses of the phenotype-genotype correlations suggest considerable prevalence of heart defects in the group of patients with larger deletions of Xq24 in comparison to the patients having intragenic UBE2A mutations. However, further studies are needed in order to establish statistically reliable phenotype-genotype correlations of this syndrome.


Subject(s)
Chromosome Deletion , Chromosomes, Human, X/genetics , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics , Child, Preschool , Humans , Infant , Infant, Newborn , Male , Syndrome
14.
Nature ; 457(7229): 612-5, 2009 Jan 29.
Article in English | MEDLINE | ID: mdl-19079240

ABSTRACT

In nature, organisms are exposed to chronic low-dose ultraviolet light (CLUV) as opposed to the acute high doses common to laboratory experiments. Analysis of the cellular response to acute high-dose exposure has delineated the importance of direct DNA repair by the nucleotide excision repair pathway and for checkpoint-induced cell cycle arrest in promoting cell survival. Here we examine the response of yeast cells to CLUV and identify a key role for the RAD6-RAD18-RAD5 error-free postreplication repair (RAD6 error-free PRR) pathway in promoting cell growth and survival. We show that loss of the RAD6 error-free PRR pathway results in DNA-damage-checkpoint-induced G2 arrest in CLUV-exposed cells, whereas wild-type and nucleotide-excision-repair-deficient cells are largely unaffected. Cell cycle arrest in the absence of the RAD6 error-free PRR pathway was not caused by a repair defect or by the accumulation of ultraviolet-induced photoproducts. Notably, we observed increased replication protein A (RPA)- and Rad52-yellow fluorescent protein foci in the CLUV-exposed rad18Delta cells and demonstrated that Rad52-mediated homologous recombination is required for the viability of the rad18Delta cells after release from CLUV-induced G2 arrest. These and other data presented suggest that, in response to environmental levels of ultraviolet exposure, the RAD6 error-free PRR pathway promotes replication of damaged templates without the generation of extensive single-stranded DNA regions. Thus, the error-free PRR pathway is specifically important during chronic low-dose ultraviolet exposure to prevent counter-productive DNA checkpoint activation and allow cells to proliferate normally.


Subject(s)
Adenosine Triphosphatases/metabolism , DNA Repair/radiation effects , DNA-Binding Proteins/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae/radiation effects , Ubiquitin-Conjugating Enzymes/metabolism , Ultraviolet Rays , Adenosine Triphosphatases/deficiency , Adenosine Triphosphatases/genetics , DNA Damage , DNA Helicases , DNA Replication/radiation effects , DNA, Fungal/radiation effects , DNA-Binding Proteins/deficiency , DNA-Binding Proteins/genetics , G2 Phase/radiation effects , Rad52 DNA Repair and Recombination Protein/metabolism , Recombination, Genetic , Replication Protein A/metabolism , Saccharomyces cerevisiae/cytology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/genetics , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics
15.
Proc Natl Acad Sci U S A ; 109(50): E3405-13, 2012 Dec 11.
Article in English | MEDLINE | ID: mdl-23184977

ABSTRACT

Autophagy is a cellular degradation process involving an intracellular membrane trafficking pathway that recycles cellular components or eliminates intracellular microbes in lysosomes. Many pathogens subvert autophagy to enhance their replication, but the mechanisms these pathogens use to initiate the autophagy process have not been elucidated. This study identifies rotavirus as a pathogen that encodes a viroporin, nonstructural protein 4, which releases endoplasmic reticulum calcium into the cytoplasm, thereby activating a calcium/calmodulin-dependent kinase kinase-ß and 5' adenosine monophosphate-activated protein kinase-dependent signaling pathway to initiate autophagy. Rotavirus hijacks this membrane trafficking pathway to transport viral proteins from the endoplasmic reticulum to sites of viral replication to produce infectious virus. This process requires PI3K activity and autophagy-initiation proteins Atg3 and Atg5, and it is abrogated by chelating cytoplasmic calcium or inhibiting calcium/calmodulin-dependent kinase kinase-ß. Although the early stages of autophagy are initiated, rotavirus infection also blocks autophagy maturation. These studies identify a unique mechanism of virus-mediated, calcium-activated signaling that initiates autophagy and hijacks this membrane trafficking pathway to transport viral proteins to sites of viral assembly.


Subject(s)
Autophagy/physiology , Calcium-Calmodulin-Dependent Protein Kinase Kinase/physiology , Rotavirus/physiology , Virus Replication/physiology , Animals , Autophagy-Related Protein 5 , Autophagy-Related Proteins , Calcium Signaling , Cell Line , Cells, Cultured , Enzyme Activation , Glycoproteins/physiology , Macaca mulatta , Mice , Mice, Knockout , Microtubule-Associated Proteins/deficiency , Microtubule-Associated Proteins/genetics , Microtubule-Associated Proteins/physiology , Protein Transport , Rotavirus/pathogenicity , Signal Transduction , Toxins, Biological/physiology , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitin-Conjugating Enzymes/physiology , Unfolded Protein Response , Viral Nonstructural Proteins/physiology , Virus Assembly/physiology
16.
Reproduction ; 145(1): 45-56, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23108111

ABSTRACT

The ubiquitination process is indispensable for proteome regulation. Three classes of ubiquitin (Ub)-related proteins can be distinguished: E1, E2 and E3. Proteins from the E2 class are responsible for the transfer of Ubls from E1 to the target protein. For this activity, interaction with class E3 ligases is usually required. Ub-conjugating enzyme E2Q 1 (UBE2Q1) belongs to the E2 class of Ub-related enzymes and is demonstrated to be involved in the regulation of membrane B4GALT1 protein. Here, we demonstrate that human UBE2Q1 and mouse Ube2q1 are widely expressed and highly conserved genes. To elucidate the function of UBE2Q1 protein, we generated knockout mouse model. No overt phenotype was detected in UBE2Q1-deficient males, but in mutant females, pleiotropic reproductive defects were observed including altered oestrus cycle, abnormal sexual behaviour and reduced offspring care. Moreover, in the uterus of mutant females, significantly increased embryonic lethality and decreased implantation capacity of homozygous mutant embryos were noticed. We found that Ube2q1 is not expressed in the uterus of non-pregnant females but its expression is up-regulated during pregnancy. Taken together, Ube2q1 is involved in different aspects of female fertility.


Subject(s)
Embryo Implantation/physiology , Infertility, Female/physiopathology , Ubiquitin-Conjugating Enzymes/deficiency , Uterus/physiopathology , Animals , Estrus/physiology , Female , Humans , Infertility, Female/metabolism , Male , Mice , Mice, Knockout , Models, Animal , Pregnancy , Pregnancy, Animal/physiology , Reproduction/physiology , Sexual Behavior, Animal/physiology , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitin-Conjugating Enzymes/metabolism , Uterus/metabolism
17.
J Biol Chem ; 286(1): 469-79, 2011 Jan 07.
Article in English | MEDLINE | ID: mdl-21044962

ABSTRACT

UbcH5c, a member of the UbcH5 family of protein ubiquitin conjugase E2 enzymes, is a critical component of biological processes in human cells, being the initial ubiquitinating enzyme of substrates like IκB, TP53, and cyclin D1. We report here that the metastasis regulator protein SLUG inhibits the expression of UbcH5c directly through chromatin remodeling and thus, among other downstream effects, elevates the level of cyclin D1, thus enhancing the growth rates of breast cancer cells. Overexpression of SLUG in the SLUG-deficient breast cancer cells significantly decreased the levels of mRNA and protein of UbcH5c but only elevated the protein levels of cyclin D1. On the contrary, knockdown of SLUG in SLUG-high breast cancer cells elevated the levels of UbcH5c while decreasing the level of cyclin D1 protein. SLUG is recruited at the E2-box sequence at the UbcH5c gene promoter along with the corepressor CtBP1 and the effector HDAC1 to silence the expression of this gene. Knockdown of UbcH5c in the SLUG-deficient human breast cells elevated the level of cyclin D1 as well as the rates of proliferation and invasiveness of these cells. Whereas the growth rates of the cells are enhanced due to overexpression of SLUG or knockdown of UbcH5c in the breast cancer cells tested, ER(+) cells also acquire resistance to the anti-estrogen 4-hydroxytamoxifen due to the rise of cyclin D1 levels in these cells. This study thus implicates high levels of SLUG and low levels of UbcH5c as a determinant in the progression of metastatic breast cancer.


Subject(s)
Breast Neoplasms/pathology , Cyclin D1/metabolism , Transcription Factors/metabolism , Ubiquitination , Breast Neoplasms/genetics , Breast Neoplasms/metabolism , Cell Line, Tumor , Cell Proliferation , Chromatin Assembly and Disassembly , Drug Resistance, Neoplasm/genetics , Gene Expression Regulation, Neoplastic/genetics , Gene Knockdown Techniques , Humans , Neoplasm Invasiveness/genetics , Promoter Regions, Genetic/genetics , Proteasome Endopeptidase Complex/metabolism , Snail Family Transcription Factors , Tamoxifen/analogs & derivatives , Tamoxifen/pharmacology , Transcription Factors/deficiency , Transcription Factors/genetics , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitin-Conjugating Enzymes/metabolism , Ubiquitination/genetics
18.
Proc Natl Acad Sci U S A ; 106(49): 20836-41, 2009 Dec 08.
Article in English | MEDLINE | ID: mdl-19926860

ABSTRACT

The ubiquitin-conjugating enzyme Ubc13 mediates lysine-63-specific protein ubiquitination involved in signal transduction by immune receptors; however, the in vivo physiological functions of Ubc13 remain incompletely understood. Using Ubc13 conditional knockout mice, we show that somatic deletion of the Ubc13 gene causes severe loss of multi lineages of immune cells, which is associated with profound atrophy of the thymus and bone marrow, as well as lethality of the mice. Ubc13 has a cell-intrinsic function in mediating hematopoiesis and is essential for the survival and accumulation of hematopoietic stem cells in the bone marrow. Interestingly, loss of Ubc13 results in accumulation of beta-catenin and hyperexpression of Wnt target genes, a condition known to cause impaired hematopoiesis. These results establish Ubc13 as a crucial regulator of hematopoiesis and suggest a role for Ubc13 in the control of Wnt signaling in hematopoietic stem cells.


Subject(s)
Hematopoiesis , Lysine/metabolism , Ubiquitin-Conjugating Enzymes/metabolism , Animals , Atrophy , Blood Cells/enzymology , Blood Cells/pathology , Bone Marrow Cells/pathology , Cell Differentiation , Embryo Loss/enzymology , Embryo Loss/pathology , Gene Expression Regulation, Developmental , Integrases/metabolism , Mice , Mice, Knockout , Signal Transduction , Stem Cells/pathology , Substrate Specificity , Thymus Gland/enzymology , Thymus Gland/pathology , Ubiquitin-Conjugating Enzymes/deficiency , Wnt Proteins/metabolism , beta Catenin/genetics , beta Catenin/metabolism
19.
BMC Genomics ; 11: 367, 2010 Jun 10.
Article in English | MEDLINE | ID: mdl-20537150

ABSTRACT

BACKGROUND: The ubiquitin-conjugating enzyme HR6B is required for spermatogenesis in mouse. Loss of HR6B results in aberrant histone modification patterns on the trancriptionally silenced X and Y chromosomes (XY body) and on centromeric chromatin in meiotic prophase. We studied the relationship between these chromatin modifications and their effects on global gene expression patterns, in spermatocytes and spermatids. RESULTS: HR6B is enriched on the XY body and on centromeric regions in pachytene spermatocytes. Global gene expression analyses revealed that spermatid-specific single- and multicopy X-linked genes are prematurely expressed in Hr6b knockout spermatocytes. Very few other differences in gene expression were observed in these cells, except for upregulation of major satellite repeat transcription. In contrast, in Hr6b knockout spermatids, 7298 genes were differentially expressed; 65% of these genes was downregulated, but we observed a global upregulation of gene transcription from the X chromosome. In wild type spermatids, approximately 20% of the single-copy X-linked genes reach an average expression level that is similar to the average expression from autosomes. CONCLUSIONS: Spermatids maintain an enrichment of repressive chromatin marks on the X chromosome, originating from meiotic prophase, but this does not interfere with transcription of the single-copy X-linked genes that are reactivated or specifically activated in spermatids. HR6B represses major satellite repeat transcription in spermatocytes, and functions in the maintenance of X chromosome silencing in spermatocytes and spermatids. It is discussed that these functions involve modification of chromatin structure, possibly including H2B ubiquitylation.


Subject(s)
Spermatids/metabolism , Spermatocytes/metabolism , Ubiquitin-Conjugating Enzymes/metabolism , X Chromosome Inactivation , X Chromosome/genetics , Animals , Cell Cycle Proteins/genetics , Centromere/genetics , Centromere/metabolism , Chromatin/genetics , Chromatin/metabolism , Gene Dosage/genetics , Gene Expression Profiling , Gene Knockout Techniques , Genes, X-Linked/genetics , Histones/genetics , Histones/metabolism , Male , Mice , Microtubule-Associated Proteins/genetics , Organ Specificity , Phosphoproteins/genetics , Testis/metabolism , Transcription, Genetic , Transcriptional Activation , Ubiquitin-Conjugating Enzymes/deficiency , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitin-Protein Ligases/metabolism , Ubiquitination , Up-Regulation , X Chromosome/metabolism , Y Chromosome/genetics
20.
Am J Med Genet A ; 152A(12): 3084-90, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21108393

ABSTRACT

We describe three patients with a comparable deletion encompassing SLC25A43, SLC25A5, CXorf56, UBE2A, NKRF, and two non-coding RNA genes, U1 and LOC100303728. Moderate to severe intellectual disability (ID), psychomotor retardation, severely impaired/absent speech, seizures, and urogenital anomalies were present in all three patients. Facial dysmorphisms include ocular hypertelorism, synophrys, and a depressed nasal bridge. These clinical features overlap with those described in two patients from a family with a similar deletion at Xq24 that also includes UBE2A, and in several patients of Brazilian and Polish families with point mutations in UBE2A. Notably, all five patients with an Xq24 deletion have ventricular septal defects that are not present in patients with a point mutation, which might be attributed to the deletion of SLC25A5. Taken together, the UBE2A deficiency syndrome in male patients with a mutation in or a deletion of UBE2A is characterized by ID, absent speech, seizures, urogenital anomalies, frequently including a small penis, and skin abnormalities, which include generalized hirsutism, low posterior hairline, myxedematous appearance, widely spaced nipples, and hair whorls. Facial dysmorphisms include a wide face, a depressed nasal bridge, a large mouth with downturned corners, thin vermilion, and a short, broad neck.


Subject(s)
Intellectual Disability/genetics , Seizures/genetics , Ubiquitin-Conjugating Enzymes/genetics , Urogenital Abnormalities/genetics , Abnormalities, Multiple/genetics , Child , Child, Preschool , Chromosomes, Human, X/genetics , Humans , Infant , Male , Pedigree , Point Mutation , Skin Abnormalities/genetics , Speech Disorders/genetics , Syndrome , Ubiquitin-Conjugating Enzymes/deficiency
SELECTION OF CITATIONS
SEARCH DETAIL