Characterization of the Bujaru, frijoles and Tapara antigenic complexes into the sandfly fever group and two unclassified phleboviruses from Brazil.

The genus Phlebovirus includes the sandfly fever viruses and tick-transmitted uukuviruses. Sandfly fever group viruses have been isolated from various vertebrate species and from phlebotomines and occasionally alternative arthropods, e.g. mosquitoes, or ceratopogonids of the genus Culicoides. Uukuniemi serogroup viruses have been isolated from various vertebrate species and from ticks. Despite the public health importance of some viruses of the genus, the genomic diversity of phleboviruses that could be incriminated as causative of human or veterinary diseases remains underestimated. Here we describe the nearly complete sequences and genomic characterization of two phleboviruses belonging to the Bujaru antigenic complex: the prototype species and the Munguba virus. Furthermore, six previously unclassified phleboviruses isolated in Brazil were also sequenced and characterized: Ambe, Anhanga, Joa, Uriurana, Urucuri and Tapara viruses. The results of the phylogenetic analysis indicated that these viruses group with viruses of three antigenic complexes (Bujaru, Tapara and frijoles clades), with two unclassified phleboviruses. We also performed genomic reassortment analysis and confirmed that there were no events for the viruses described in this study, but we found a new potential reassortment in Medjerda Valley virus, which contains S and L segments of Arbia virus, and probably a unique M segment, both viruses circulate in the same geographic region, indicating these two isolates represent two distinct viruses. This study provides insights into the genetic diversity, classification and evolution of phleboviruses.

Oropouche virus is detected in peripheral blood leukocytes from patients.

Oropouche virus (OROV) is a frequent cause of arboviral febrile disease in the Amazon. The present report describes studies done in two patients, one of them; the first OROV human case acquired outside of the Amazon, which have revealed for the first time the presence of OROV in peripheral blood leukocytes. This novel finding raises important issues regarding pathogenesis of human infections and may offer a new tool, for the rapid diagnosis of this neglected infection. J. Med. Virol. 89:1108-1111, 2017. © 2017 Wiley Periodicals, Inc.

Generation of Recombinant Oropouche Viruses Lacking the Nonstructural Protein NSm or NSs.

UNLABELLED: Oropouche virus (OROV) is a midge-borne human pathogen with a geographic distribution in South America. OROV was first isolated in 1955, and since then, it has been known to cause recurring outbreaks of a dengue-like illness in the Amazonian regions of Brazil. OROV, however, remains one of the most poorly understood emerging viral zoonoses. Here we describe the successful recovery of infectious OROV entirely from cDNA copies of its genome and generation of OROV mutant viruses lacking either the NSm or the NSs coding region. Characterization of the recombinant viruses carried out in vitro demonstrated that the NSs protein of OROV is an interferon (IFN) antagonist as in other NSs-encoding bunyaviruses. Additionally, we demonstrate the importance of the nine C-terminal amino acids of OROV NSs in IFN antagonistic activity. OROV was also found to be sensitive to IFN-α when cells were pretreated; however, the virus was still capable of replicating at doses as high as 10,000 U/ml of IFN-α, in contrast to the family prototype BUNV. We found that OROV lacking the NSm protein displayed characteristics similar to those of the wild-type virus, suggesting that the NSm protein is dispensable for virus replication in the mammalian and mosquito cell lines that were tested. IMPORTANCE: Oropouche virus (OROV) is a public health threat in Central and South America, where it causes periodic outbreaks of dengue-like illness. In Brazil, OROV is the second most frequent cause of arboviral febrile illness after dengue virus, and with the current rates of urban expansion, more cases of this emerging viral zoonosis could occur. To better understand the molecular biology of OROV, we have successfully rescued the virus along with mutants. We have established that the C terminus of the NSs protein is important in interferon antagonism and that the NSm protein is dispensable for virus replication in cell culture. The tools described in this paper are important in terms of understanding this important yet neglected human pathogen.

Complete genome sequence of Piry vesiculovirus.

Piry virus (PIRYV) is a rhabdovirus (genus Vesiculovirus) and is described as a possible human pathogen, originally isolated from a Philander opossum trapped in Para State, Northern Brazil. This study describes the complete full coding sequence and the genetic characterization of PIRYV. The genome sequence reveals that PIRYV has a typical vesiculovirus-like organization, encoding the five genes typical of the genus. Phylogenetic analysis confirmed that PIRYV is most closely related to Perinet virus and clustered in the same clade as Chandipura and Isfahan vesiculoviruses.

Establishment of a minigenome system for Oropouche virus reveals the S genome segment to be significantly longer than reported previously.

Oropouche virus (OROV) is a medically important orthobunyavirus, which causes frequent outbreaks of a febrile illness in the northern parts of Brazil. However, despite being the cause of an estimated half a million human infections since its first isolation in Trinidad in 1955, details of the molecular biology of this tripartite, negative-sense RNA virus remain limited. We have determined the complete nucleotide sequence of the Brazilian prototype strain of OROV, BeAn 19991, and found a number of differences compared with sequences in the database. Most notable were that the S segment contained an additional 204 nt at the 3' end and that there was a critical nucleotide mismatch at position 9 within the base-paired terminal panhandle structure of each genome segment. In addition, we obtained the complete sequence of the Trinidadian prototype strain TRVL-9760 that showed similar characteristics to the BeAn 19991 strain. By using a T7 RNA polymerase-driven minigenome system, we demonstrated that cDNA clones of the BeAn 19991 L and S segments expressed functional proteins, and also that the newly determined terminal untranslated sequences acted as functional promoters in the minigenome assay. By co-transfecting a cDNA to the viral glycoproteins, virus-like particles were generated that packaged a minigenome and were capable of infecting naive cells.

Genetic analysis of members of the species Oropouche virus and identification of a novel M segment sequence.

Oropouche virus (OROV) is a public health threat in South America, and in particular in northern Brazil, causing frequent outbreaks of febrile illness. Using a combination of deep sequencing and Sanger sequencing approaches, we determined the complete genome sequences of eight clinical isolates that were obtained from patient sera during an Oropouche fever outbreak in Amapa state, northern Brazil, in 2009. We also report the complete genome sequences of two OROV reassortants isolatd from two marmosets in Minas Gerais state, south-east Brazil, in 2012 that contained a novel M genome segment. Interestingly, all 10 isolates possessed a 947 nt S segment that lacked 11 residues in the S-segment 3' UTR compared with the recently redetermined Brazilian prototype OROV strain BeAn19991. OROV maybe circulating more widely in Brazil and in the non-human primate population than previously appreciated, and the identification of yet another reassortant highlights the importance of bunyavirus surveillance in South America.

Perfil lipídico e fatores de risco para doenças cardiovasculares em idosos acompanhados na atenção primária à saúde / Lipid profile and risk factors for cardiovascular diseases in older people seen in primary health care / Perfil lipídico y factores de riesgo de enfermedades cardiovasculares en ancianos seguidos en la atención primaria de salud / Lipid profile and risk factors for cardiovascular diseases in older people seen in primary health care

Introdução: As dislipidemias estão entre os fatores de riscos mais importantes para o desenvolvimento de doenças cardiovasculares (DCV), além de estarem relacionadas a outras patologias que predispõem às DCV. Em função da elevada prevalência e da incidência de complicações associadas à cronicidade da doença, as dislipidemias representam elevados custos ao setor da saúde e da previdência social. Diante disso, ressalta-se a importância do Sistema Único de Saúde, representado pela Atenção Primária à Saúde (APS), em prover práticas de prevenção, diagnóstico e acompanhamento dos pacientes dislipidêmicos, a fim de desonerar o sistema financeiro e promover o envelhecimento saudável. Objetivo: Descrever a prevalência de perfil lipídico alterado entre os idosos. Além disso, pretendeu-se caracterizar a amostra quanto aos aspectos sociodemográficos, de saúde e de comportamento, bem como analisar os fatores associados à distribuição do perfil lipídico alterado e às características da amostra. Métodos: Estudo transversal com dados secundários, obtidos de agosto de 2021 a julho de 2022, tendo como população pacientes idosos em acompanhamento na APS do município de Marau (RS). Todos os dados foram coletados dos prontuários eletrônicos da rede de APS e, após dupla digitação e validação dos dados, a amostra foi caracterizada por meio de estatística descritiva. Foi calculada a prevalência de perfil lipídico alterado com intervalo de confiança de 95% (IC95%) e foi verificada sua distribuição conforme as variáveis de exposição, empregando-se o teste do χ2 e admitindo-se erro tipo I de 5%. Resultados: A prevalência de dislipidemia proporcional entre os sexos foi maior no feminino (33%). A cor de pele predominante foi a branca (76,7%). Cerca de 20% dos pacientes apresentavam colesterol total, colesterol HDL-c e triglicerídeos alterados, enquanto cerca de 15% apresentavam o colesterol HDL-c anormal. Constatou-se que os pacientes dislipidêmicos apresentam mais diabetes e hipertensão em relação aos não dislipidêmicos, ocorrendo a sinergia de fatores de risco para as DCV. Conclusões: A caracterização exercida neste estudo serve de base científica para a compreensão da realidade local e, também, para o direcionamento de políticas públicas na atenção primária que atuem de forma efetiva na prevenção e no controle das dislipidemias e demais fatores de risco cardiovascular.

Introduction: Dyslipidemias are among the most important risk factors for the development of cardiovascular diseases (CVD), in addition to being related to other pathologies that predispose to CVD. Because of the high prevalence and incidence of complications associated with the chronicity of the disease, dyslipidemias represent high costs for the health and social security sector. This highlights the importance of the Unified Health System, represented by primary health care (PHC), in providing prevention, diagnosis and follow-up practices for dyslipidemic patients to relieve the financial system and promote healthy aging. Objective: The study aimed to describe the prevalence of altered lipid profile among older people. In addition, we sought to characterize the sample in terms of sociodemographic, health and behavioral aspects, as well as to analyze the factors associated with the distribution of the altered lipid profile and the characteristics of the sample. Methods: We conducted a cross-sectional study with secondary data, from August 2021 to July 2022, with older patients being followed up at the PHC in the city of Marau (RS) as the study population. All data were collected from the electronic medical records of the PHC network, and after double-typing and validation, the sample was characterized using descriptive statistics. The prevalence of altered lipid profile was determined with a 95% confidence interval (95%CI), and its distribution was verified according to the exposure variables, using the chi-square test and a type I error of 5%. Results: The prevalence of proportional dyslipidemia between sexes was higher in females (33%). The predominant skin color was white (76.7%). About 20% of the patients had altered total cholesterol, HDL-C and triglycerides, while about 15% had abnormal HDL-C. It was found that more dyslipidemic patients had diabetes and hypertension than non-dyslipidemic patients, with a synergy of risk factors for CVD. Conclusions: The characterization carried out in this study serves as a scientific basis for understanding the local reality and also for directing public policies in PHC that act effectively in the prevention and control of dyslipidemia and other cardiovascular risk factors.

Introducción: las dislipidemias se encuentran entre los factores de riesgo más importantes para el desarrollo de enfermedades cardiovasculares (ECV), además de estar relacionadas con otras patologías que predisponen a ECV. Debido a la alta prevalencia e incidencia de complicaciones asociadas a la cronicidad de la enfermedad, las dislipidemias representan altos costos para los sectores de salud y seguridad social. Frente a eso, se destaca la importancia del Sistema Único de Salud, representado por la Atención Primaria de Salud (APS), en la provisión de prácticas de prevención, diagnóstico y seguimiento de pacientes dislipidémicos, con el fin de descongestionar el sistema financiero y promover el envejecimiento saludable. Objetivo: El estudio tiene como objetivo describir la prevalencia del perfil lipídico alterado entre los ancianos. Además, se pretende caracterizar la muestra en cuanto a aspectos sociodemográficos, de salud y conductuales, así como analizar los factores asociados a la distribución del perfil lipídico alterado y las características de la muestra. Métodos: estudio transversal con datos secundarios, de agosto de 2021 a julio de 2022, con pacientes ancianos en seguimiento en la APS del municipio de Marau (RS) como población. Todos los datos fueron recolectados de la historia clínica electrónica de la red de la APS y, luego de doble digitación y validación, la muestra fue caracterizada mediante estadística descriptiva. Se calculó la prevalencia de perfil lipídico alterado con un intervalo de confianza del 95% (IC95%) y se verificó su distribución según las variables de exposición, utilizando la prueba de chi-cuadrado y admitiendo un error tipo I del 5%. Resultados: la prevalencia de dislipidemia proporcional entre sexos fue mayor en el sexo femenino (33%). El color de piel predominante fue el blanco (76,7%). Alrededor del 20% de los pacientes tenían colesterol total, colesterol HDL-C y triglicéridos alterados, mientras que alrededor del 15% tenían colesterol HDL-C anormal. Se encontró que los pacientes dislipidémicos tienen más diabetes e hipertensión que los pacientes no dislipidémicos, con una sinergia de factores de riesgo para ECV. Conclusiones: la caracterización realizada en este estudio sirve de base científica para comprender la realidad local y también para orientar políticas públicas en atención primaria que actúen de manera efectiva en la prevención y control de la dislipidemia y otros factores de riesgo cardiovascular.

Prevalência de Influenza A, vírus sincicial respiratório eSARS-CoV-2 em pacientes com síndrome respiratóriaaguda grave em Passo Fundo, Rio Grande do Sul / Prevalence of Influenza A, respiratory syncytial virus andSARS-CoV-2 in patients with severe acute respiratorysyndrome in Passo Fundo, Rio Grande do Sul

A síndrome respiratória aguda grave (SRAG) é caracterizada por sintomas de febre alta, tosse e dispneia, e, na maioria dos casos, relacionada a uma quantidade reduzida de agentes infecciosos. O objetivo foi avaliar a prevalência dos vírus respiratórios Influenza A (FluA), vírus sincicial respiratório (RSV) e do novo coronavírus (SARS-CoV-2) em pacientes com internação hospitalar por SRAG. Estudo transversal, com pacientes em internação hospitalar com SRAG entre novembro de 2021 e maio de 2022. Dados sociodemográficos e clínicos e amostras da nasofaringe foram coletados/as, as quais foram submetidas à extração de RNA e testadas quanto à positividade para Influenza A, RSV e SARS-CoV-2 por meio da técnica de PCR em tempo real pelo método SYBR Green. Foram incluídos 42 pacientes, sendo 59,5% do sexo feminino, 57,1% idosos, 54,8% com ensino fundamental. A maior parte dos pacientes reportou hábito tabagista prévio ou atual (54,8%), não etilista (73,8%) e 83,3% deles apresentavam alguma comorbidade, sendo hipertensão arterial sistêmica e diabetes mellitus tipo 2 as mais prevalentes. Um total de 10,5% dos pacientes testou positivo para FluA, nenhuma amostra positiva para RSV e 76,3% positivos para SARS-CoV-2. Na população estudada, SRAG com agravo hospitalar foi observado em maior proporção, em mulheres, idosos e pessoas com comorbidades, embora sem significância estatística, sendo o novo coronavírus o agente etiológico mais relacionado, o que evidencia a patogenicidade desse agente e suas consequências ainda são evidentes após quase 2 anos de período pandêmico.

Severe acute respiratory syndrome (SARS) is characterized by symptoms of high fever, cough and dyspnea, and is in most cases related to a reduced amount of infectious agents. The objective was to assess the prevalence of respiratory viruses Influenza A (FluA), respiratory syncytial virus (RSV) and the new coronavirus (SARS-CoV-2) in patients hospitalized for SARS. Cross-sectional study, with patients hospitalized with SARS between November 2021 and May 2022. Sociodemographic and clinical data and nasopharyngeal samples were collected, which were subjected to RNA extraction and tested for positivity for Influenza A, RSV and SARS-CoV-2 using the real-time PCR technique using the SYBR Green method. 42 patients were included, 59.5% female, 57.1% elderly, 54.8% with primary education. Most patients reported previous or current smoking habits (54.8%), non-drinkers (73.8) and 83.3% of them had some comorbidity, with systemic arterial hypertension and type 2 diabetes mellitus being the most prevalent. A total of 10.5% of patients tested positive for FluA, no samples positive for RSV, and 76.3% positive for SARS-CoV-2. In the studied population, SARS with hospital injury was observed more frequently in women and the elderly, with associated comorbidities, with the new coronavirus being the most related etiological agent, which shows, although not statistically significant, that the pathogenicity of this agent and its consequences are still evident after almost 2 years of period pandemic.

Association Between Active Commuting and Cardiometabolic Diseases in Primary Health Care Users

Abstract Background Although active commuting is inversely related to cardiovascular disease risk factors, these associations are unknown among Brazilian primary health care users. Objective To investigate the association between active commuting to daily activities and the prevalence of cardiometabolic diseases. Methods This cross-sectional study, conducted between May and August 2019, included primary health care users from all 34 primary health care centers in Passo Fundo, a city in southern Brazil. Cardiometabolic diseases (type 2 diabetes, hypertension, hypercholesterolemia, hypertriglyceridemia, cardiovascular diseases, and overweight/obesity) were measured by self-reported medical diagnosis using a questionnaire. Active commuting was analyzed dichotomously: daily commuting on foot or by bicycle was considered active, while daily commuting by car, motorcycle, or bus was considered passive. To determine the association between cardiometabolic diseases and active commuting, crude and adjusted prevalence ratios (PR) were estimated using Poisson regression, considering p <0.05 significant. Results The sample consisted of 1443 patients. There was an inverse association between active commuting and type 2 diabetes (PR: 0.59; 95% CI [Confidence Interval]: 0.39-0.90) and overweight/obesity (PR: 0.83: 95% CI: 0.71-0.98). Conclusion A lower prevalence of type 2 diabetes and obesity/overweight was observed in people who actively commute. These findings indicate that changes in urban infrastructure to enable safe active commuting will positively impact the health of the population.

Prevalência de fatores associados à autopercepção do comportamento sexual de risco em adultos e idosos / Prevalence of factors associated with self-perception of sexual risky behaviour in adults and elderly

Introdução: o comportamento sexual de risco pode ser definido como aquele que expõe o indivíduo à maior probabilidade de contrair uma infecção sexualmente transmissível. Objetivo: avaliar a autopercepção do comportamento sexual de risco e seus fatores associados. Metodologia: foi realizado um estudo transversal com 1.443 adultos e idosos, de ambos os sexos, usuários da Atenção Primária à Saúde (APS) de Passo Fundo ­ RS, dos quais foram analisadas características sociodemográficas e comportamentais. Resultados: a prevalência da autopercepção do comportamento sexual de risco foi de 15% (IC95 13-17). Da amostra, 8,8% relataram ter tido dois ou mais parceiros sexuais no último ano, enquanto 64,6% não fazem uso de preservativo durante a relação sexual. Maior probabilidade de autopercepção do comportamento sexual de risco foi identificado em indivíduos cuja escolaridade é de nível fundamental, sem cônjuge e que relataram multiplicidade de parceiros sexuais. Conclusão: apesar da considerável prevalência da autopercepção de comportamento sexual de risco, esta não esteve relacionada ao não uso do preservativo, reforçando a necessidade de constante educação sexual da população adulta e idosa usuária da APS, visando à redução da exposição às doenças sexualmente transmissíveis.

Introduction: sexual risky behaviour can be defined as that which exposes the individual to the greatest probability of contracting a sexually transmitted infection. Objective: To evaluate the self-perception of sexual risky behaviour and associated factors. Methods: a cross-sectional study was conducted with 1.443 adults and seniors, of both sex, users of Primary Health Care in Passo Fundo ­ RS, from whom sociodemographic and behaviour characteristics were analysed. Results: The prevalence of self-perceived sexual risky behaviour was 15% (IC95 13-17). In the sample, 8,8% reported having had 2 or more sexual partners in the last year, while 64,6% did not use condoms during sexual intercourse. Higher probability of self-perceived sexual risky behaviour was identified in individual's whit basic education, in those without a spouse and who reported a multiplicity of sexual partners. Conclusion: Despite the considerable prevalence of self-perception of risky sexual behavior, it was not related to not use of condoms, reinforcing the need for constant sexual education of the adult and elderly population who use primary care, aiming at reducing exposure to sexually transmitted diseases.

Prevalência de diabetes mellitustipo 2 em usuários da Atenção Primária àSaúdee fatores associados / Prevalence of type 2 diabetes mellitus in users of Primary Health Care and associated factors

O diabetes mellitus tipo 2 (DM2) é uma patologia crônica que cresceu mundialmente. Quando mal controlado, pode acarretar ao seu portador diversas complicações, comprometendo, assim, a sua qualidade de vida. O presente trabalho teve como objetivo estimar a prevalência e os fatores associados à diabetes mellitus tipo 2 (DM2) em usuários da Atenção Primária à Saúde (APS). Trata-se de um estudo transversal realizado de maio a agosto de 2019. A estatística compreendeu o cálculo da prevalência de DM2, es eu intervalo de confiança foi de 95% (IC95). Para verificação dos fatores ajustados, foram calculadas as Razões de Prevalência (RP), brutas e ajustadas. A amostra foi de 1.365 usuários, com prevalência do desfecho de9% (IC95 8-11), sendo esta maior entre idosos (RP=2,21; IC95 1,50-3,26), hipertensos (RP= 3,02; IC95 1,90-4,81), pessoas com hipertrigliceridemia (RP=2,38; IC95 1,67-3,38), polimedicados (RP=2,91; IC95 1,82-4,67) e que não praticavam atividade física (RP=1,71; IC95 1,04-2,79) e menor entre aqueles que não exerciam atividade remunerada (RP=0,39; IC95 0,22-0,70) e com costume de pesquisar sobre saúde na internet (RP=0,51; IC95 0,30-0,88). Os achados obtidos nesse estudo destacam a imprescindibilidade à promoção de ações inovadoras com novas formas de atenção primária.

Type 2 diabetes mellitus (DM2) is a chronic pathology that has grown worldwide. If poorly controlled, it can cause several complications to the patient, thus compromising their quality of life. The present study aimed to estimate the prevalence and factors associated with type 2 Diabetes mellitus (DM2) in users of Primary Health Care (PHC). This is a cross-sectional study carried out from May to August 2019. The statistics comprised the calculation of the prevalence of DM2, and its 95% confidence interval (95% CI). To check the adjusted factors, gross and adjusted Prevalence Ratios (PR) were calculated. Thesample consisted of 1,365 users, with a 9% prevalence of the outcome (CI95 8-11), which was higher among the elderly (PR = 2.21; CI95 1.50-3.26), hypertensive patients (PR = 3.02; CI95 1.90-4.81), with hypertriglyceridemia (PR = 2.38; CI95 1.67-3.38), polymedicates (PR = 2.91; CI95 1.82-4.67) and that did not practice physical activity (PR = 1.71; CI95 1.04-2.79) and lower, among those who did not engage in paid activity (PR = 0.39; CI95 0.22-0.70) and with the habit of researching on health on the internet (PR = 0.51; 95% CI 0.30-0.88). The findings obtained in this study the need to promote innovative actions with new forms of primary care is highlighted.

Prevalência e fatores associados à autopercepção negativa da saúde em usuários atendidos na atenção primária em um município do norte gaúcho / Prevalence and factors associated with negative self-perception of health in patients treated in primary care in a municipality in the north of the state of Rio Grande do Sul

A autopercepção da saúde é considerada um importante indicador das condições de saúde por se basear em critérios subjetivos e objetivos e por sua capacidade preditora de morbimortalidade, sendo, portanto, utilizada como instrumento norteador de ações de promoção da saúde. Objetivou-se estimar a prevalência de autopercepção negativa da saúde e sua associação com fatores sociodemográficos, de saúde e de comportamento em usuários da Atenção Primária à Saúde. Trata-se de um estudo transversal realizado em Passo Fundo, RS, entre maio e agosto de 2019, com adultos e idosos em atendimento na Atenção Primária à Saúde. Calculou-se a prevalência do desfecho, com intervalo de confiança de 95% (IC95) e as Razões de Prevalência (RP) brutas e ajustadas, visando identificar os fatores associados. A amostra foi de 1.443 participantes, com prevalência do desfecho de 47% (IC95 44-49), sendo esta maior entre mulheres, idosos, portadores de multimorbidade, com dor crônica, polimedicados, com insônia, em tratamento psicológico e com autopercepção negativa da alimentação. Por outro lado, os usuários com no mínimo o ensino superior, brancos, não tabagistas e aqueles com hábitos alimentares inadequados estiveram menos associados ao desfecho. Conclui-se que a alta prevalência de autopercepção negativa da saúde e os fatores associados reforçam a necessidade da atenção por parte dos profissionais de saúde para a promoção de intervenções específicas e efetivas nessa população.

Self-perceived health is considered an important indicator of health conditions because it is based on subjective and objective criteria and because of its predictive capacity for morbidity and mortality, therefore, it is used as a guiding instrument for health promotion actions. The objective of this study was to estimate the prevalence of negative self-rated health and its association with sociodemographic, health and behavioral factors in users of Primary Health Care. It was about a cross-sectional study carried out in Passo Fundo, RS, between May and August 2019, with adults and elderly people cared for at the Primary Health Care. The prevalence of the outcome was calculated, with a 95% confidence interval (CI95) and the crude and adjusted Prevalence Ratios (PR) in order to identify the associated factors. The sample consisted of 1,443 participants, with an outcome prevalence of 47% (CI95 44-49), which was higher among women, elderly, multimorbidity patients, with chronic pain, polymedicated, with insomnia, undergoing psychological treatment and with self-perception negative food. On the other hand, users with at least higher education, whites, non-smokers and those with inadequate eating habits were less predisposed to the outcome. It is concluded that the high prevalence of negative self-perception of health and associated factors reinforce the need for attention by health professionals to promote specific and effective interventions in this population.

Vulnerabilidade social na população idosa usuária da Atenção Primária à Saúde de um município do Rio Grande do Sul / Social vulnerability of the older population using PrimaryHealth Care in a municipality of Rio Grande do Sul

O envelhecimento populacional, realidade no Brasil, é um processo fisiológico acompanhado por diversos fatores que podem aumentar a vulnerabilidade dessa população. O objetivo do presente estudo foi caracterizar uma amostra de idosos usuários da Atenção Primária à Saúde quanto aos fatores sociodemográficos, aspectos de saúde e hábitos de vida, associados à prevalência de vulnerabilidade social, de acordo com variáveis preditoras. Os dados foram coletados por meio de aplicação de questionário e posteriormente digitados, validados e analisados por meio de estatística descritiva. Foram entrevistados 403 idosos, com maioria composta pelo sexo feminino, idade entre 60-69 anos, da cor branca, que possuem companheiro, cursaram o ensino fundamental, que praticam atividade física, não fumam ou bebem, não exercem atividade remunerada, com renda per capita mensal menor ou igual a 1 salário mínimo, que residem com 2 pessoas e que possuem 3 ou mais doenças crônicas não transmissíveis. A prevalência de vulnerabilidade social, dada pela ausência de cônjuge, baixa escolaridade e baixa renda, foi de 51% e variou em função do sexo (56,7% em mulheres; p=0,01), mas não variou em função da idade (p=0,30) e da cor da pele (p=0,07). A maior vulnerabilidade social em idosas é decorrente da maior longevidade, associada muitas vezes à ausência de companheiro, bem como pelas históricas desvantagens educacionais, que culminam em baixa escolaridade, e dificuldades financeiras, como menor renda, em comparação aos homens.

Ageing population, a reality in Brazil, is a physiological process accompanied by several factors that can increase the vulnerability of this population. The objective of the present study was to characterize a sample of older population users of the urban network of Primary Health Care regarding sociodemographic factors, health aspects and lifestyle habits, associated with the prevalence of social vulnerability, in accordance with predictor's variables. Data were collected through questionnaire application and later typed, validated and analyzed using descriptive statistics. We interviewed 403 elderly, with a majority composed of females, aged 60-69 years, white, who have a partner, attended elementary school, who practice physical activity, do not smoke or drink, do not perform paid activity, with per capita monthly income less than or equal to 1 minimum wage, who live with 2 people and who have 3 or more chronic non-communicable diseases. The prevalence of social vulnerability, given by the absence of spouse, low schooling and low income, was 51% and varied according to gender (56.7% in women; p=0.01), but did not vary according to age (p=0.30) and skin color (p=0.07). The greater social vulnerability in the old women is due to greater longevity, often associated with the absence of a partner, as well as historical educational, with low educational level, and income disadvantages, as lower income, compared to men.

Revalidation and genetic characterization of new members of Group C (Orthobunyavirus genus, Peribunyaviridae family) isolated in the Americas.

Group C serogroup includes members of the Orthobunyavirus genus (family Peribunyaviridae) and comprises 15 arboviruses that can be associated with febrile illness in humans. Although previous studies described the genome characterization of Group C orthobunyavirus, there is a gap in genomic information about the other viruses in this group. Therefore, in this study, complete genomes of members of Group C serogroup were sequenced or re-sequenced and used for genetic characterization, as well as to understand their phylogenetic and evolutionary aspects. Thus, our study reported the genomes of three new members in Group C virus (Apeu strain BeAn848, Itaqui strain BeAn12797 and Nepuyo strain BeAn10709), as well as re-sequencing of original strains of five members: Caraparu (strain BeAn3994), Madrid (strain BT4075), Murucutu (strain BeAn974), Oriboca (strain BeAn17), and Marituba (strain BeAn15). These viruses presented a typical genomic organization related to members of the Orthobunyavirus genus. Interestingly, all viruses of this serogroup showed an open reading frame (ORF) that encodes the putative nonstructural NSs protein that precedes the nucleoprotein ORF, an unprecedented fact in Group C virus. Also, we confirmed the presence of natural reassortment events. This study expands the genomic information of Group C viruses, as well as revalidates the genomic organization of viruses that were previously reported.

Viral diversity of Rhipicephalus microplus parasitizing cattle in southern Brazil.

Ticks are ectoparasites spread worldwide and are well known as vectors of many viruses of great importance to human and animal health. However, the viral diversity in ticks is still poorly understood, particularly in South America. Here we characterized the viral diversity present in Rhipicephalus microplus parasitizing cattle in the southern region of Brazil using metagenomics. Our study revealed the presence of viruses that had not been previously described in the region, including lihan tick virus (Phenuiviridae family) and wuhan tick virus 2 (Chuviridae family), as well as expands the biogeography of jingmen tick virus (Flaviviridae family) in Brazil. Also, we described three novel tymoviruses (Tymovirales order), named guarapuava tymovirus-like 1 to 3. We described the genomic and phylogenetic characterization of these viruses. Our study sheds light on the viral diversity of Rhipicephalus microplus in South America, and also expands the biogeography of tick viruses that were previously described only in Asia.

Novel Parvoviruses from Wild and Domestic Animals in Brazil Provide New Insights into Parvovirus Distribution and Diversity.

Parvoviruses (family Parvoviridae) are small, single-stranded DNA viruses. Many parvoviral pathogens of medical, veterinary and ecological importance have been identified. In this study, we used high-throughput sequencing (HTS) to investigate the diversity of parvoviruses infecting wild and domestic animals in Brazil. We identified 21 parvovirus sequences (including twelve nearly complete genomes and nine partial genomes) in samples derived from rodents, bats, opossums, birds and cattle in Pernambuco, São Paulo, Paraná and Rio Grande do Sul states. These sequences were investigated using phylogenetic and distance-based approaches and were thereby classified into eight parvovirus species (six of which have not been described previously), representing six distinct genera in the subfamily Parvovirinae. Our findings extend the known biogeographic range of previously characterized parvovirus species and the known host range of three parvovirus genera (Dependovirus, Aveparvovirus and Tetraparvovirus). Moreover, our investigation provides a window into the ecological dynamics of parvovirus infections in vertebrates, revealing that many parvovirus genera contain well-defined sub-lineages that circulate widely throughout the world within particular taxonomic groups of hosts.

Characterization of the Gamboa Virus Serogroup (Orthobunyavirus Genus, Peribunyaviridae Family).

Comprehensive comparative phylogenetic analyses were performed on 17 Gamboa serogroup viruses (GAMSVs) from distinct geographic regions in the Americas and other representative members of the genus Orthobunyavirus (Peribunyaviridae), based on small (S), medium (M), and large (L) open reading frame full-length and partial sequences. Genome characterization showed that the GAMSVs divide into four clades or genotypes. The GAMSVs have a genetic organization similar to other orthobunyaviruses, except that they have a larger NSm protein than other orthobunyaviruses. A serosurvey for Gamboa virus antibodies was performed in plasma from birds, other wild animals, and humans living around the Tucuruí hydroelectric dam in Pará state, northern Brazil, a known focus of GAMSV activity. Newborn chicks (Gallus gallus domesticus) were experimentally infected with a GAMSV, and the pathogenesis is described. Histopathological changes were primarily in the lungs and liver. Also, a review of the ecology of the GAMSVs in the Americas is included. In sum, this study presents the genomic and evolutionary characterization of the Gamboa group and the potential model of pathogenesis, which would be helpful for diagnostic purposes, epidemiology, and immunopathogenesis studies.

Genomic characterization and evolution of Tacaiuma orthobunyavirus (Peribunyaviridae family) isolated in Brazil.

Tacaiuma virus (TCMV) is antigenically characterized as a member of the Anopheles A complex in the Orthobunyavirus genus, Peribunyaviridae family (Bunyavirales order). Clinically, the TCMV infection is characterized by acute febrile illness with myalgia and arthralgia lasting three to five days. However, the genomic and evolutionary aspect of this virus has not been elucidated. In this study, we described the complete coding sequences of three segments of two TCMV strains isolated in Brazil and three complete coding sequences of the small segment of three TCMV strains. All the strains sequenced in this study showed the typical genomic organization of orthobunyaviruses that infect vertebrates, except for the absence of the open reading frame that encodes the well-described non-structural small protein. This study presents the genomic and evolutionary characterization of TCMV strains and would be helpful for diagnostic purposes and epidemiology.

Correlation between Helicobacter pylori infection, gastric diseases and life habits among patients treated at a university hospital in Southeast Brazil.

Helicobacter pylori is considered a significant agent in the development of various gastric diseases. However, the diseases caused by this bacterium are known as being multi-factorial, with the genotype, immune system and life habits of the host playing important roles in the establishment of the clinical outcome. Also, H. pylori exhibit a high degree of genetic variability, contributing to the complexity of the host-pathogen relationship. These observations, considered together with the widely-varying origins and social habits of the Brazilian population, lead us to speculate about the influence of these life habits on H. pylori infection and the clinical outcome. Therefore, in this study we evaluated the relationship between H. pylori infection and certain diseases in 172 patients treated at the Hospital das Clínicas of Ribeirão Preto (HCRP), Brazil, taking into account their different life habits, such as non-steroidal anti-inflammatory drugs and alcohol ingestion, and smoking habit. Our analysis indicated that H. pylori infection is not affected by any of the life habits evaluated but is associated with the development of peptic ulcers (gastric and duodenal ulcer) and inverse correlate with gastroesophageal reflux disease (GERD). No correlation was found between the infection with this bacterium and gastritis or intestinal metaplasia. However, gastritis and erosive gastritis were directly correlated with non-steroidal anti-inflammatory drugs (NSAID) ingestion. Moreover, ingestion of alcohol beverages exhibited a protective effect on gastritis development in men. Our data also indicated that to achieve reliable detection of this bacterium in biopsies, two or three detection methods should be used.

The Potential for Reassortment between Oropouche and Schmallenberg Orthobunyaviruses.

A number of viruses within the Peribunyaviridae family are naturally occurring reassortants, a common phenomenon for segmented viruses. Using a minigenome-reporter and virus-like particle (VLP) production assay, we have accessed the potential of Oropouche virus (OROV), Schmallenberg virus (SBV), and other orthobunyaviruses within the Simbu serogroup to reassort. We found that the untranslated region (UTR) in the medium segment is a potential contributing factor for reassortment by the tested viruses. We demonstrate that for promoter activity to occur it was essential that the viral RNA polymerase (L) and nucleocapsid (N) proteins were from the same virus, reinforcing the hypothesis that the large and small segments that encode these proteins segregate together during genome reassortment. Our results indicate that, given the right epidemiological setting, reassortment between SBV and OROV would potentially be feasible and could contribute to the emergence of a new Simbu virus.