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1.
Osteoarthritis Cartilage ; 20(4): 288-95, 2012 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-22285735

RESUMEN

OBJECTIVE: Functional cartilage tissue engineering aims to generate grafts with a functional surface, similar to that of authentic cartilage. Bioreactors that stimulate cell-scaffold constructs by simulating natural joint movements hold great potential to generate cartilage with adequate surface properties. In this study two methods based on atomic force microscopy (AFM) were applied to obtain information about the quality of engineered graft surfaces. For better understanding of the molecule-function relationships, AFM was complemented with immunohistochemistry. METHODS: Bovine chondrocytes were seeded into polyurethane scaffolds and subjected to dynamic compression, applied by a ceramic ball, for 1h daily [loading group 1 (LG1)]. In loading group 2 (LG2), the ball additionally oscillated over the scaffold, generating sliding surface motion. After 3 weeks, the surfaces of the engineered constructs were analyzed by friction force and indentation-type AFM (IT-AFM). Results were complemented and compared to immunohistochemical analyses. RESULTS: The loading type significantly influenced the mechanical and histological outcomes. Constructs of LG2 exhibited lowest friction coefficient and highest micro- and nanostiffness. Collagen type II and aggrecan staining were readily observed in all constructs and appeared to reach deeper areas in loaded (LG1, LG2) compared to unloaded scaffolds. Lubricin was specifically detected at the top surface of LG2. CONCLUSIONS: This study proposes a quantitative AFM-based functional analysis at the micrometer- and nanometer scale to evaluate the quality of cartilage surfaces. Mechanical testing (load-bearing) combined with friction analysis (gliding) can provide important information. Notably, sliding-type biomechanical stimuli may favor (re-)generation and maintenance of functional articular surfaces and support the development of mechanically competent engineered cartilage.


Asunto(s)
Cartílago Articular/fisiología , Condrocitos/fisiología , Ingeniería de Tejidos/métodos , Agrecanos/metabolismo , Animales , Reactores Biológicos , Cartílago Articular/citología , Cartílago Articular/metabolismo , Bovinos , Colágeno Tipo II/metabolismo , Elasticidad , Fricción , Glicoproteínas/metabolismo , Microscopía de Fuerza Atómica/métodos , Movimiento (Física) , Estrés Mecánico , Propiedades de Superficie , Andamios del Tejido , Soporte de Peso
2.
Curr Opin Cell Biol ; 4(1): 20-6, 1992 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-1558750

RESUMEN

A consensus view on the three-dimensional structure of the F-actin filament and the relative strength of the intersubunit contacts in the filament has been established from an atomic filament model and recent three-dimensional reconstructions from electron micrographs of F-actin filaments. Functional implications of recent structural and biochemical data indicating a rather dynamic filament structure are discussed.


Asunto(s)
Citoesqueleto de Actina/química , Actinas/química , Citoesqueleto de Actina/ultraestructura , Actinas/ultraestructura , Animales , Modelos Moleculares , Conformación Proteica , Relación Estructura-Actividad
3.
Curr Opin Cell Biol ; 12(1): 79-90, 2000 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-10679360

RESUMEN

The assembly of intermediate filament (IF) arrays involves the recruitment of a complex set of cell-type-specific IF-associated proteins. Some of them are integral membrane proteins, others act as crosslinking proteins with vectorial binding activities, and yet others comprise motor proteins. In vivo IFs appear to be predominantly heteropolymers, although in vitro several IF proteins (e.g. vimentin, desmin, neurofilament (NF)-L and the nuclear lamins) do self-assemble into IF-like polymers. In contrast, NF-M, NF-H, nestin, synemin and paranemin, all bona fide IF proteins, are unable to self-assemble into IFs either in vitro or in vivo. The individual IF proteins of this large multigene family are chemically heterogeneous, exhibiting different assembly kinetics and yielding discrete types of filaments. The unique physical properties and interaction capabilities of these distinct IF molecular building blocks, in combination with accessory proteins, mediate the generation of a highly dynamic and interconnected, cell-type-specific cytoarchitecture.


Asunto(s)
Filamentos Intermedios/química , Filamentos Intermedios/metabolismo , Citoesqueleto de Actina/metabolismo , Animales , Núcleo Celular/metabolismo , Citoplasma/metabolismo , Humanos , Filamentos Intermedios/genética , Laminas , Microtúbulos/metabolismo , Familia de Multigenes , Distrofias Musculares/genética , Distrofias Musculares/metabolismo , Proteínas Nucleares/genética , Proteínas Nucleares/metabolismo , Procesamiento Proteico-Postraduccional
4.
Curr Opin Cell Biol ; 8(3): 397-406, 1996 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-8743893

RESUMEN

Transport of proteins, RNAs and ribonucleoprotein particles into and out of the nucleus is essential for many cellular functions to proceed. Recent progress in this area of research has led to the identification of a number of signals and cytosolic factors that mediate the nuclear import of proteins through the nuclear pore complexes. However, as the sites on the nuclear pore complex at which these signals and factors exert their function are still largely unidentified, the molecular mechanisms underlying this nuclear import pathway remain to be elucidated.


Asunto(s)
Núcleo Celular/química , Núcleo Celular/metabolismo , Proteínas Nucleares/metabolismo , Animales , Transporte Biológico/fisiología , Membrana Nuclear/química , Membrana Nuclear/metabolismo
5.
Curr Opin Cell Biol ; 6(1): 25-33, 1994 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-8167022

RESUMEN

Thus far, intermediate filaments (IFs) have been the least understood of the three cytoskeletal filament systems with regard to their structure, assembly, network formation, and dynamics. This picture is now slowly but definitely changing, as recent in vivo and in vitro experiments, including generation of transgenic animals, have yielded important new data shedding light on the following areas: the molecular architecture of IFs; the role of the highly variable end domains during IF assembly and network formation; the factors that govern whether IF proteins are involved in de novo filament formation or are incorporated into a pre-existing IF network; and the effects of post-translational modifications, such as phosphorylation and glycosylation of IF polypeptides, on filament assembly, dynamics and turnover.


Asunto(s)
Filamentos Intermedios/fisiología , Filamentos Intermedios/ultraestructura , Animales , Animales Modificados Genéticamente , Glicosilación , Humanos , Modelos Estructurales , Enfermedad de la Neurona Motora/genética , Enfermedad de la Neurona Motora/patología , Enfermedad de la Neurona Motora/fisiopatología , Procesamiento Proteico-Postraduccional , Enfermedades de la Piel/genética , Enfermedades de la Piel/patología , Enfermedades de la Piel/fisiopatología
6.
Curr Opin Cell Biol ; 11(3): 391-401, 1999 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-10395558

RESUMEN

Toward dissecting the molecular composition and architecture of the nuclear pore complex (NPC), over the past 18 months novel nucleoporins and NPC subcomplexes were identified and characterized. The three-dimensional structure of isolated yeast NPCs was determined by electron cryomicroscopy. New specimen preparation and labeling protocols localized a number of nucleoporins and NPC subcomplexes within the three-dimensional architecture of the yeast NPC. Structural changes of native NPCs mediated by physiological effectors such as calcium or ATP were monitored by time-lapse atomic force microscopy, thus revealing a first glimpse of the NPC's functional dynamics.


Asunto(s)
Membrana Nuclear/fisiología , Animales , Humanos , Glicoproteínas de Membrana/fisiología , Membrana Nuclear/ultraestructura , Proteínas Nucleares/fisiología
7.
Nat Med ; 7(5): 591-7, 2001 May.
Artículo en Inglés | MEDLINE | ID: mdl-11329061

RESUMEN

Although cytoskeletal mutations are known causes of genetically based forms of dilated cardiomyopathy, the pathways that link these defects with cardiomyopathy are unclear. Here we report that the alpha-actinin-associated LIM protein (ALP; Alp in mice) has an essential role in the embryonic development of the right ventricular (RV) chamber during its exposure to high biomechanical workloads in utero. Disruption of the gene encoding Alp (Alp) is associated with RV chamber dilation and dysfunction, directly implicating alpha-actinin-associated proteins in the onset of cardiomyopathy. In vitro assays showed that Alp directly enhances the capacity of alpha-actinin to cross-link actin filaments, indicating that the loss of Alp function contributes to destabilization of actin anchorage sites in cardiac muscle. Alp also colocalizes at the intercalated disc with alpha-actinin and gamma-catenin, the latter being a known disease gene for human RV dysplasia. Taken together, these studies point to a novel developmental pathway for RV dilated cardiomyopathy via instability of alpha-actinin complexes.


Asunto(s)
Actinina/genética , Cardiomiopatías/etiología , Ventrículos Cardíacos/patología , Proteínas de Homeodominio/fisiología , Animales , Cardiomiopatías/genética , Proteínas del Citoesqueleto/metabolismo , Desmoplaquinas , Ventrículos Cardíacos/metabolismo , Proteínas de Homeodominio/genética , Proteínas de Homeodominio/metabolismo , Ratones , gamma Catenina
8.
J Cell Biol ; 97(1): 264-9, 1983 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-6190821

RESUMEN

We show that freeze-dried actin filaments which have been rotary shadowed with a light coat of platinum appear very similar in morphology and width to negatively-stained filaments. The addition of a thicker coat of platinum to such preparations gives the actin filaments a different morphology and width, which are similar to those of the rotary-shadowed, quick-frozen filaments described by Heuser and Kirschner (J. Cell Biol. 1980, 86:212-234). The consistent view of the actin filament presented here, particularly its 7-8-nm width, can be interpreted in terms of the overall orientation of the actin subunit in the actin filament.


Asunto(s)
Actinas , Liofilización , Sustancias Macromoleculares , Microscopía Electrónica , Modelos Moleculares , Coloración y Etiquetado
9.
J Cell Biol ; 93(2): 452-8, 1982 May.
Artículo en Inglés | MEDLINE | ID: mdl-7096448

RESUMEN

We describe a method for the induction of different polymorphic forms of actin filament paracrystals. This polymorphism is probably based on differences in the stagger and/or polarity of adjacent filaments in single-layered paracrystals and by superposition of different layers in multilayered paracrystals. The helical parameters defining the filament geometry are indistinguishable for the different polymorphic forms observed and for the four different actins used. Analysis of these paracrystals, some of which are ordered to better than 2.5 nm, should provide a reference structure suitable for alignment and orientation within the actin filament of high resolution models of the actin monomer obtained from crystal data.


Asunto(s)
Actinas , Cristalización , Sustancias Macromoleculares , Microscopía Electrónica , Polilisina , Cloruro de Potasio
10.
J Cell Biol ; 110(6): 2013-24, 1990 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-2351691

RESUMEN

Cross-linking of actin filaments (F-actin) into bundles and networks was investigated with three different isoforms of the dumbbell-shaped alpha-actinin homodimer under identical reaction conditions. These were isolated from chicken gizzard smooth muscle, Acanthamoeba, and Dictyostelium, respectively. Examination in the electron microscope revealed that each isoform was able to cross-link F-actin into networks. In addition, F-actin bundles were obtained with chicken gizzard and Acanthamoeba alpha-actinin, but not Dictyostelium alpha-actinin under conditions where actin by itself polymerized into disperse filaments. This F-actin bundle formation critically depended on the proper molar ratio of alpha-actinin to actin, and hence F-actin bundles immediately disappeared when free alpha-actinin was withdrawn from the surrounding medium. The apparent dissociation constants (Kds) at half-saturation of the actin binding sites were 0.4 microM at 22 degrees C and 1.2 microM at 37 degrees C for chicken gizzard, and 2.7 microM at 22 degrees C for both Acanthamoeba and Dictyostelium alpha-actinin. Chicken gizzard and Dictyostelium alpha-actinin predominantly cross-linked actin filaments in an antiparallel fashion, whereas Acanthamoeba alpha-actinin cross-linked actin filaments preferentially in a parallel fashion. The average molecular length of free alpha-actinin was 37 nm for glycerol-sprayed/rotary metal-shadowed and 35 nm for negatively stained chicken gizzard; 46 and 44 nm, respectively, for Acanthamoeba; and 34 and 31 nm, respectively, for Dictyostelium alpha-actinin. In negatively stained preparations we also evaluated the average molecular length of alpha-actinin when bound to actin filaments: 36 nm for chicken gizzard and 35 nm for Acanthamoeba alpha-actinin, a molecular length roughly coinciding with the crossover repeat of the two-stranded F-actin helix (i.e., 36 nm), but only 28 nm for Dictyostelium alpha-actinin. Furthermore, the minimal spacing between cross-linking alpha-actinin molecules along actin filaments was close to 36 nm for both smooth muscle and Acanthamoeba alpha-actinin, but only 31 nm for Dictyostelium alpha-actinin. This observation suggests that the molecular length of the alpha-actinin homodimer may determine its spacing along the actin filament, and hence F-actin bundle formation may require "tight" (i.e., one molecule after the other) and "untwisted" (i.e., the long axis of the molecule being parallel to the actin filament axis) packing of alpha-actinin molecules along the actin filaments.


Asunto(s)
Citoesqueleto de Actina/fisiología , Actinina/fisiología , Actinas/análisis , Citoesqueleto/fisiología , Acanthamoeba , Citoesqueleto de Actina/metabolismo , Citoesqueleto de Actina/ultraestructura , Actinina/análisis , Actinina/metabolismo , Actinas/metabolismo , Actinas/fisiología , Animales , Centrifugación/métodos , Pollos , Dictyostelium , Electroforesis en Gel de Poliacrilamida , Microscopía Electrónica , Estructura Molecular , Músculos/análisis , Músculos/metabolismo , Músculos/ultraestructura
11.
J Cell Biol ; 106(3): 785-96, 1988 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-3346326

RESUMEN

We have used N,N'-1,4-phenylenebismaleimide, a bifunctional sulfhydryl cross-linking reagent, to probe the oligomeric state of actin during the early stages of its polymerization into filaments. We document that one of the first steps in the polymerization of globular monomeric actin (G-actin) under a wide variety of ionic conditions is the dimerization of a significant fraction of the G-actin monomer pool. As polymerization proceeds, the yield of this initial dimer ("lower" dimer with an apparent molecular mass of 86 kD by SDS-PAGE [LD]) is attenuated, while an actin filament dimer ("upper" dimer with an apparent molecular mass of 115 kD by SDS-PAGE [UD] as characterized [Elzinga, M., and J. J. Phelan. 1984. Proc. Natl. Acad. Sci. USA. 81:6599-6602]) is formed. This shift from LD to UD occurs concomitant with formation of filaments as assayed by N-(1-pyrenyl)iodoacetamide fluorescence enhancement and electron microscopy. Isolated cross-linked LD does not form filaments, while isolated cross-linked UD will assemble into filaments indistinguishable from those polymerized from unmodified G-actin under typical filament-forming conditions. The presence of cross-linked LD does not effect the kinetics of polymerization of actin monomer, whereas cross-linked UD shortens the "lag phase" of the polymerization reaction in a concentration-dependent fashion. Several converging lines of evidence suggest that, although accounting for a significant oligomeric species formed during early polymerization, the LD is incompatible with the helical symmetry defining the mature actin filament; however, it could represent the interfilament dimer found in paracrystalline arrays or filament bundles. Furthermore, the LD is compatible with the unit cell structure and symmetry common to various types of crystalline actin arrays (Aebi, U., W. E. Fowler, G. Isenberg, T. D. Pollard, and P. R. Smith. 1981. J. Cell Biol. 91:340-351) and might represent the major structural state in which a mutant beta-actin (Leavitt, J., G. Bushar, T. Kakunaga, H. Hamada, T. Hirakawa, D. Goldman, and C. Merril. 1982. Cell. 28:259-268) is arrested under polymerizing conditions.


Asunto(s)
Citoesqueleto de Actina/metabolismo , Actinas/metabolismo , Citoesqueleto/metabolismo , Citoesqueleto de Actina/ultraestructura , Actinas/aislamiento & purificación , Animales , Cromatografía en Gel , Reactivos de Enlaces Cruzados/farmacología , Electroforesis en Gel de Poliacrilamida , Maleimidas/farmacología , Microscopía Electrónica , Polímeros/aislamiento & purificación , Polímeros/metabolismo
12.
J Cell Biol ; 138(3): 559-74, 1997 Aug 11.
Artículo en Inglés | MEDLINE | ID: mdl-9245786

RESUMEN

The effect of the type of metal ion (i.e., Ca2+, Mg2+, or none) bound to the high-affinity divalent cation binding site (HAS) of actin on filament assembly, structure, and dynamics was investigated in the absence and presence of the mushroom toxin phalloidin. In agreement with earlier reports, we found the polymerization reaction of G-actin into F-actin filaments to be tightly controlled by the type of divalent cation residing in its HAS. Moreover, novel polymerization data are presented indicating that LD, a dimer unproductive by itself, does incorporate into growing F-actin filaments. This observation suggests that during actin filament formation, in addition to the obligatory nucleation- condensation pathway involving UD, a productive filament dimer, a facultative, LD-based pathway is implicated whose abundance strongly depends on the exact polymerization conditions chosen. The "ragged" and "branched" filaments observed during the early stages of assembly represent a hallmark of LD incorporation and might be key to producing an actin meshwork capable of rapidly assembling and disassembling in highly motile cells. Hence, LD incorporation into growing actin filaments might provide an additional level of regulation of actin cytoskeleton dynamics. Regarding the structure and mechanical properties of the F-actin filament at steady state, no significant correlation with the divalent cation residing in its HAS was found. However, compared to native filaments, phalloidin-stabilized filaments were stiffer and yielded subtle but significant structural changes. Together, our data indicate that whereas the G-actin conformation is tightly controlled by the divalent cation in its HAS, the F-actin conformation appears more robust than this variation. Hence, we conclude that the structure and dynamics of the Mg-F-actin moiety within the thin filament are not significantly modulated by the cyclic Ca2+ release as it occurs in muscle contraction to regulate the actomyosin interaction via troponin.


Asunto(s)
Actinas/metabolismo , Actinas/ultraestructura , Calcio/metabolismo , Magnesio/metabolismo , Actinas/química , Biopolímeros , Reactivos de Enlaces Cruzados , Dimerización , Ácido Egtácico/farmacología , Fluorescencia , Procesamiento de Imagen Asistido por Computador , Maleimidas , Microscopía Electrónica , Microscopía Electrónica de Transmisión de Rastreo , Faloidina/farmacología , Cloruro de Potasio/farmacología , Conformación Proteica , Estructura Secundaria de Proteína
13.
J Cell Biol ; 102(5): 1767-77, 1986 May.
Artículo en Inglés | MEDLINE | ID: mdl-2422179

RESUMEN

The four major keratins of normal human epidermis (molecular mass 50, 56.5, 58, and 65-67 kD) can be subdivided on the basis of charge into two subfamilies (acidic 50-kD and 56.5-kD keratins vs. relatively basic 58-kD and 65-67-kD keratins) or subdivided on the basis of co-expression into two "pairs" (50-kD/58-kD keratin pair synthesized by basal cells vs. 56.5-kD/65-67-kD keratin pair expressed in suprabasal cells). Acidic and basic subfamilies were separated by ion exchange chromatography in 8.5 M urea and tested for their ability to reassemble into 10-nm filaments in vitro. The two keratins in either subfamily did not reassemble into 10-nm filaments unless combined with members of the other subfamily. While electron microscopy of acidic and basic keratins equilibrated in 4.5 M urea showed that keratins within each subfamily formed distinct oligomeric structures, possibly representing precursors in filament assembly, chemical cross-linking followed by gel analysis revealed dimers and larger oligomers only when subfamilies were combined. In addition, among the four major keratins, the acidic 50-kD and basic 58-kD keratins showed preferential association even in 8.5 M urea, enabling us to isolate a 50-kD/58-kD keratin complex by gel filtration. This isolated 50-kD/58-kD keratin pair readily formed 10-nm filaments in vitro. These results demonstrate that in tissues containing multiple keratins, two keratins are sufficient for filament assembly, but one keratin from each subfamily is required. More importantly, these data provide the first evidence for the structural significance of specific co-expressed acidic/basic keratin pairs in the formation of epithelial 10-nm filaments.


Asunto(s)
Citoesqueleto/ultraestructura , Filamentos Intermedios/ultraestructura , Queratinas/fisiología , Epidermis/ultraestructura , Humanos , Punto Isoeléctrico , Queratinas/clasificación , Microscopía Electrónica , Peso Molecular , Unión Proteica , Relación Estructura-Actividad
14.
J Cell Biol ; 126(3): 603-17, 1994 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-8045926

RESUMEN

We have used antibodies directed against a number of nuclear pore complex (NPC) proteins to determine their mutual interactions and location within the three-dimensional structure of the NPC. A monoclonal antibody, termed QE5, recognized three NPC polypeptides, p250, NUP153, and p62 on Western blots, and labeled the nuclear envelope of several cultured cell lines by immunofluorescence microscopy. These three polypeptides contained O-linked N-acetylglucosamine residues and were released from the NPC by detergent/high-salt treatment as discrete high molecular weight complexes. p250 was found in association with a novel 75 kD protein, NUP153 was released as a homo-oligomer of about 1 megadalton, and p62 was associated with polypeptides of 58 and 54 kD (previously reported by Finlay, D. R., E. Meier, P. Bradley, J. Horecka, and D. J. Forbes. 1991. J. Cell Biol. 114:169-183). p75, p58, and p54 were not galactosylated in vitro. Xenopus oocyte NEs were labeled with gold-conjugated QE5 and prepared for electron microscopy by quick freezing/freeze drying/rotary metal shadowing. This EM preparation method enabled us to more precisely localize the epitopes of this antibody to the cytoplasmic filaments and the nuclear basket of the NPC. Since QE5 recognizes three O-linked NPC glycoproteins, its labeling was compared with that of the lectin wheat germ agglutinin which recognizes O-linked N-acetylglucosamine moieties. The two probes were found to yield similar, although not identical, distributions of label. To identify the individual proteins with particular NPC components, we have used an anti-peptide antibody against NUP153 and a monospecific anti-p250 polyclonal antibody. Labeling with these two antibodies has documented that NUP153 is a constituent of the nuclear basket with at least one of its epitopes residing in its terminal ring, whereas p250 is a constituent of the cytoplasmic filaments.


Asunto(s)
Membrana Nuclear/metabolismo , Proteínas de Complejo Poro Nuclear , Proteínas Nucleares/metabolismo , Secuencia de Aminoácidos , Animales , Anticuerpos/inmunología , Western Blotting , Línea Celular , Citoplasma/metabolismo , Técnica del Anticuerpo Fluorescente , Células HeLa , Humanos , Glicoproteínas de Membrana/inmunología , Glicoproteínas de Membrana/metabolismo , Glicoproteínas de Membrana/ultraestructura , Datos de Secuencia Molecular , Membrana Nuclear/inmunología , Membrana Nuclear/ultraestructura , Proteínas Nucleares/inmunología , Proteínas Nucleares/ultraestructura , Ratas
15.
J Cell Biol ; 97(4): 1131-43, 1983 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-6194161

RESUMEN

We show that intermediate-sized filaments reconstituted from human epidermal keratins appear unraveled in the presence of phosphate ions. In such unraveling filaments, up to four "4.5-nm protofibrils" can be distinguished, which are helically twisted around each other in a right-handed sense. Lowering the pH of phosphate-containing preparations causes the unraveling filaments to further dissociate into "2-nm protofilaments." In addition, we find that reconstitution of keratin extracts in the presence of small amounts of trypsin yields paracrystalline arrays of 4.5-nm protofibrils with a prominent 5.4-nm axial repeat. Limited proteolysis of intact filaments immobilized on an electron microscope grid also unveils the presence of 4.5-nm protofibrils within the filament with the same 5.4-nm axial repeat. These results, together with other published data, are consistent with a 10-nm filament model based on three distinct levels of helical organization: (a) the 2-nm protofilament, consisting of multi-chain extended alpha-helical segments coiled around each other; (b) the 4.5-nm protofibril, being a multi-stranded helix of protofilaments; and (c) the 10-nm filament, being a four-stranded helix of protofibrils.


Asunto(s)
Citoesqueleto/análisis , Queratinas/análisis , Cationes Bivalentes/farmacología , Citoesqueleto/ultraestructura , Epidermis , Humanos , Concentración de Iones de Hidrógeno , Sustancias Macromoleculares , Microscopía Electrónica , Modelos Biológicos , Fosfatos/farmacología , Conformación Proteica , Tripsina
16.
J Cell Biol ; 143(3): 577-88, 1998 Nov 02.
Artículo en Inglés | MEDLINE | ID: mdl-9813081

RESUMEN

The nuclear pore complex (NPC), a supramolecular assembly of approximately 100 different proteins (nucleoporins), mediates bidirectional transport of molecules between the cytoplasm and the cell nucleus. Extensive structural studies have revealed the three- dimensional (3D) architecture of Xenopus NPCs, and eight of the approximately 12 cloned and characterized vertebrate nucleoporins have been localized within the NPC. Thanks to the power of yeast genetics, 30 yeast nucleoporins have recently been cloned and characterized at the molecular level. However, the localization of these nucleoporins within the 3D structure of the NPC has remain elusive, mainly due to limitations of preparing yeast cells for electron microscopy (EM). We have developed a new protocol for preparing yeast cells for EM that yielded structurally well-preserved yeast NPCs. A direct comparison of yeast and Xenopus NPCs revealed that the NPC structure is evolutionarily conserved, although yeast NPCs are 15% smaller in their linear dimensions. With this preparation protocol and yeast strains expressing nucleoporins tagged with protein A, we have localized Nsp1p and its interacting partners Nup49p, Nup57p, Nup82p, and Nic96p by immuno-EM. Accordingly, Nsp1p resides in three distinct subcomplexes which are located at the entry and exit of the central gated channel and at the terminal ring of the nuclear basket.


Asunto(s)
Proteínas de Unión al Calcio , Proteínas Fúngicas/análisis , Proteínas de Complejo Poro Nuclear , Proteínas Nucleares/análisis , Proteínas de Saccharomyces cerevisiae , Saccharomyces cerevisiae/química , Animales , Núcleo Celular/química , Citoplasma/química , Proteínas Fluorescentes Verdes , Proteínas Luminiscentes/análisis , Proteínas de la Membrana/análisis , Membrana Nuclear/química , Proteínas Recombinantes de Fusión/análisis , Saccharomyces cerevisiae/ultraestructura , Xenopus
17.
J Cell Biol ; 123(6 Pt 1): 1517-33, 1993 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-8253847

RESUMEN

Neurofilaments, assembled from NF-L, NF-M, and NF-H subunits, are the most abundant structural elements in myelinated axons. Although all three subunits contain a central, alpha-helical rod domain thought to mediate filament assembly, only NF-L self-assembles into 10-nm filaments in vitro. To explore the roles of the central rod, the NH2-terminal head and the COOH-terminal tail domain in filament assembly, full-length, headless, tailless, and rod only fragments of mouse NF-L were expressed in bacteria, purified, and their structure and assembly properties examined by conventional and scanning transmission electron microscopy (TEM and STEM). These experiments revealed that in vitro assembly of NF-L into bona fide 10-nm filaments requires both end domains: whereas the NH2-terminal head domain promotes lateral association of protofilaments into protofibrils and ultimately 10-nm filaments, the COOH-terminal tail domain controls lateral assembly of protofilaments so that it terminates at the 10-nm filament level. Hence, the two end domains of NF-L have antagonistic effects on the lateral association of protofilaments into higher-order structures, with the effect of the COOH-terminal tail domain being dominant over that of the NH2-terminal head domain. Consideration of the 21-nm axial beading commonly observed with 10-nm filaments, the approximate 21-nm axial periodicity measured on paracrystals, and recent cross-linking data combine to support a molecular model for intermediate filament architecture in which the 44-46-nm long dimer rods overlap by 1-3-nm head-to-tail, whereas laterally they align antiparallel both unstaggered and approximately half-staggered.


Asunto(s)
Filamentos Intermedios/ultraestructura , Proteínas de Neurofilamentos/química , Animales , Bovinos , Técnicas In Vitro , Filamentos Intermedios/química , Sustancias Macromoleculares , Ratones , Microscopía Electrónica , Unión Proteica , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína , Proteínas Recombinantes , Relación Estructura-Actividad
18.
J Cell Biol ; 115(3): 689-703, 1991 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-1918159

RESUMEN

Three-dimensional (3-D) helical reconstructions computed from electron micrographs of negatively stained dispersed F-actin filaments invariably revealed two uninterrupted columns of mass forming the "backbone" of the double-helical filament. The contact between neighboring subunits along the thus defined two long-pitch helical strands was spatially conserved and of high mass density, while the intersubunit contact between them was of lower mass density and varied among reconstructions. In contrast, phalloidinstabilized F-actin filaments displayed higher and spatially more conserved mass density between the two long-pitch helical strands, suggesting that this bicyclic hepta-peptide toxin strengthens the intersubunit contact between the two strands. Consistent with this distinct intersubunit bonding pattern, the two long-pitch helical strands of unstabilized filaments were sometimes observed separated from each other over a distance of two to six subunits, suggesting that the intrastrand intersubunit contact is also physically stronger than the interstrand contact. The resolution of the filament reconstructions, extending to 2.5 nm axially and radially, enabled us to reproducibly "cut out" the F-actin subunit which measured 5.5 nm axially by 6.0 nm tangentially by 3.2 nm radially. The subunit is distinctly polar with a massive "base" pointing towards the "barbed" end of the filament, and a slender "tip" defining its "pointed" end (i.e., relative to the "arrowhead" pattern revealed after stoichiometric decoration of the filaments with myosin subfragment 1). Concavities running approximately parallel to the filament axis both on the inner and outer face of the subunit define a distinct cleft separating the subunit into two domains of similar size: an inner domain confined to radii less than or equal to 2.5-nm forms the uninterrupted backbone of the two long-pitch helical strands, and an outer domain placed at radii of 2-5-nm protrudes radially and thus predominantly contributes to the outer part of the massive base. Quantitative evaluation of successive crossover spacings along individual F-actin filaments revealed the deviations from the mean repeat to be compensatory, i.e., short crossovers frequently followed long ones and vice versa. The variable crossover spacings and diameter of the F-actin filament together with the local unraveling of the two long-pitch helical strands are explained in terms of varying amounts of compensatory "lateral slipping" of the two strands past each other roughly perpendicular to the filament axis. This intrinsic disorder of the actin filament may enable the actin moiety to play a more active role in actin-myosin-based force generation than merely act as a rigid passive cable as has hitherto been assumed.


Asunto(s)
Actinas/ultraestructura , Actinas/efectos de los fármacos , Actinas/metabolismo , Animales , Análisis de Fourier , Microscopía Electrónica , Modelos Estructurales , Músculos/metabolismo , Faloidina/farmacología , Conformación Proteica , Conejos
19.
J Cell Biol ; 113(3): 485-95, 1991 May.
Artículo en Inglés | MEDLINE | ID: mdl-2016332

RESUMEN

Chicken lamin B2, a nuclear member of the intermediate-type filament (IF) protein family, was expressed as a full-length protein in Escherichia coli. After purification, its structure and assembly properties were explored by EM, using both glycerol spraying/low-angle rotary metal shadowing and negative staining for preparation, as well as by analytical ultracentrifugation. At its first level of structural organization, lamin B2 formed "myosin-like" 3.1S dimers consisting of a 52-nm-long tail flanked at one end by two globular heads. These myosin-like molecules are interpreted to represent two lamin polypeptides interacting via their 45-kD central rod domains to form a segmented, parallel and unstaggered 52-nm-long two-stranded alpha-helical coiled-coil, and their COOH-terminal end domains folding into globular heads. At the second level of organization, lamin B2 dimers associated longitudinally to form polar head-to-tail polymers. This longitudinal mode of association of laminin dimers is in striking contrast to the lateral mode of association observed previously for cytoplasmic IF dimers. At the third level of organization, these polar head-to-tail polymers further associated laterally, in an approximately half-staggered fashion, to form filamentous and eventually paracrystal-like structures revealing a pronounced 24.5-nm axial repeat. Finally, following up on recent studies implicating the mitotic cdc2 kinase in the control of lamin polymerization (Peter, M., J. Nakagawa, M. Dorée, J. C. Labbé, and E. A. Nigg. 1990. Cell. 61:591-602), we have examined the effect of phosphorylation by purified cdc2 kinase on the assembly properties and molecular interactions of the bacterially expressed lamin B2. Phosphorylation of chicken lamin B2 by cdc2 kinase interferes with the head-to-tail polymerization of the lamin dimers. This finding supports the notion that cdc2 kinase plays a major, direct role in triggering mitotic disassembly of the nuclear lamina.


Asunto(s)
Lamina Tipo B , Proteínas Nucleares/química , Animales , Secuencia de Bases , Proteína Quinasa CDC2/metabolismo , Calcio/farmacología , Pollos , Cristalización , Escherichia coli/genética , Escherichia coli/metabolismo , Laminas , Sustancias Macromoleculares , Datos de Secuencia Molecular , Proteínas Nucleares/genética , Proteínas Nucleares/aislamiento & purificación , Proteínas Nucleares/metabolismo , Fosforilación , Polímeros , Proteínas Recombinantes/química , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo
20.
J Cell Biol ; 91(2 Pt 1): 340-51, 1981 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-7309785

RESUMEN

Crystalline sheets of Acanthamoeba actin induced by the trivalent lanthanide gadolinium exist in three different polymorphic forms, which show different striation patterns and surface topographies. We have called these different forms "rectangular" and "square" sheets, and "cylinders" and have shown that each of the three forms is constructed from common "basic" lattices associated in different ways. We have used image processing of electron micrographs to obtain a model for the actin molecule in projection to a resolution of 1.5 nm. The overall dimensions observed in these images are 5.6 x 3.3 x 4.5 nm, and the molecule itself appears distinctly bilobed with the two lobes separated by a cleft. actin monomers in the sheets are arranged with P2 symmetry and are therefore packed in a manner different from that of the molecules in actin filaments. Because approximately 35% of the surface area of the actin molecule is exposed on the surface of these sheets, the sheets should be useful to study the stoichiometric binding of actin-binding proteins to the actin molecule.


Asunto(s)
Actinas , Amoeba/análisis , Animales , Computadores , Cristalización , Gadolinio , Sustancias Macromoleculares , Microscopía Electrónica , Modelos Químicos
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