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1.
Clin Immunol ; 265: 110293, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-38936523

RESUMEN

Patients with caspase-associated recruitment domain-9 (CARD9) deficiency are more likely to develop invasive fungal disease that affect CNS. However, the understanding of how Candida invades and persists in CNS is still limited. We here reported a 24-year-old woman who were previously immunocompetent and diagnosed with CNS candidiasis. A novel autosomal recessive homozygous CARD9 mutation (c.184 + 5G > T) from this patient was identified using whole genomic sequencing. Furthermore, we extensively characterized the impact of this CARD9 mutation on the host immune response in monocytes, neutrophils and CD4 + T cells, using single cell sequencing and in vitro experiments. Decreased pro-inflammatory cytokine productions of CD14 + monocyte, impaired Th17 cell differentiation, and defective neutrophil accumulation in CNS were found in this patient. In conclusion, this study proposed a novel mechanism of CNS candidiasis development. Patients with CNS candidiasis in absence of known immunodeficiencies should be analyzed for CARD9 gene mutation as the cause of invasive fungal infection predisposition.


Asunto(s)
Proteínas Adaptadoras de Señalización CARD , Humanos , Proteínas Adaptadoras de Señalización CARD/genética , Proteínas Adaptadoras de Señalización CARD/deficiencia , Femenino , Adulto Joven , Mutación , Neutrófilos/inmunología , Células Th17/inmunología , Candidiasis Mucocutánea Crónica/genética , Candidiasis Mucocutánea Crónica/inmunología , Monocitos/inmunología , Citocinas
2.
Mol Cell Probes ; 52: 101580, 2020 08.
Artículo en Inglés | MEDLINE | ID: mdl-32330556

RESUMEN

Rapid detection of severe fever with thrombocytopenia syndrome virus (SFTSV) is crucial for its control and surveillance. In this study, a rapid isothermal real-time reverse-transcription recombinase polymerase amplification (RT-RPA) assay was developed for the detection of SFTSV. The detection limit at 95% probability was 241 copies per reaction. A test of 120 serum samples of suspected severe fever with thrombocytopenia syndrome (SFTS) patients revealed that the sensitivity and specificity of the RT-RPA assay was approximately 96.00% (95%CI: 80.46%-99.79%) and 98.95% (95% CI: 94.28%-99.95%), respectively; the kappa value was 0.9495 (P<0.001). The Bland-Altman analysis showed that 87.50% of the different data points were located within the 95% limits of agreement, indicating a good correlation between the results from RT-RPA assays and those of RT-qPCR assays. In conclusion, the rapid and efficient RT-RPA assay can be a promising candidate for point-of-care detection method of SFTSV.


Asunto(s)
Bioensayo/métodos , Recombinasas/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa/métodos , Síndrome de Trombocitopenia Febril Grave/virología , Humanos , Phlebovirus , Sensibilidad y Especificidad
3.
J Eukaryot Microbiol ; 65(2): 191-199, 2018 03.
Artículo en Inglés | MEDLINE | ID: mdl-28787535

RESUMEN

Acanthamoeba spp. can be parasitic in certain situations and are responsible for serious human infections, including Acanthamoeba keratitis, granulomatous amoebic encephalitis, and cutaneous acanthamoebiasis. We analyzed the fatty acid composition of Acanthamoeba castellanii trophozoites and tested the inhibitory activity of the main fatty acids, oleic acid and arachidonic acid, in vitro. Oleic acid markedly inhibited the growth of A. castellanii, with trophozoite viability of 57.4% at a concentration of 200 µM. Caspase-3 staining and annexin V assays showed that apoptotic death occurred in A. castellanii trophozoites. Quantitative PCR and dot blot analysis showed increased levels of metacaspase and interleukin-1ß converting enzyme, which is also an indication of apoptosis. In contrast, arachidonic acid showed negligible inhibition of growth of A. castellanii trophozoites. Stimulated expression of Atg3, Atg8 and LC3A/B genes and monodansylcadaverine labeling suggested that oleic acid induces apoptosis by triggering autophagy of trophozoites.


Asunto(s)
Acanthamoeba castellanii/efectos de los fármacos , Apoptosis/efectos de los fármacos , Ácido Oléico/farmacología , Trofozoítos/efectos de los fármacos , Acanthamoeba castellanii/genética , Autofagia , Caspasa 3/genética
4.
Parasitology ; 145(14): 1890-1895, 2018 12.
Artículo en Inglés | MEDLINE | ID: mdl-29739480

RESUMEN

We have previously shown that the C-terminal region of the intermediate subunit of Entamoeba histolytica galactose- and N-acetyl-D-galactosamine-inhibitable lectin (C-Igl) is a useful antigen for serodiagnosis of amebiasis. An immunochromatographic kit was developed using fluorescent silica nanoparticles coated with C-Igl prepared in Escherichia coli. Samples for examination were added to the freeze-dried particles and then applied to the immunochromatographic device, in which a test line on the membrane was also coated with C-Igl. Fluorescent intensity was measured using a hand-held reader. In an evaluation of the kit using a human monoclonal antibody, the minimum amount of C-Igl specific antibody showing positive results was 100 pg. In the evaluation of serum samples with different antibody titers in indirect immunofluorescent antibody tests in the kit, 20 µL of serum was sufficient to obtain positive results at 30 min. Serum samples from symptomatic patients with amebic colitis and amebic liver abscess and those from asymptomatic E. histolytica-cyst carriers showed positive results in the kit. Based on evaluation using sera from healthy controls and patients with other infectious diseases, the sensitivity and specificity of the kit were 100 and 97.6%, respectively. Therefore, we conclude that the newly developed kit is useful for rapid serodiagnosis of amebiasis.


Asunto(s)
Amebiasis/diagnóstico , Anticuerpos Antiprotozoarios/sangre , Cromatografía de Afinidad/instrumentación , Juego de Reactivos para Diagnóstico , Pruebas Serológicas/instrumentación , Anticuerpos Monoclonales/inmunología , Antígenos de Protozoos/sangre , Disentería Amebiana/diagnóstico , Entamoeba histolytica , Entamebiasis/diagnóstico , Humanos , Absceso Hepático Amebiano/diagnóstico , Nanopartículas , Sensibilidad y Especificidad , Dióxido de Silicio
5.
Parasitol Res ; 117(8): 2467-2472, 2018 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-29808233

RESUMEN

In Nepal, gastrointestinal infections due to parasites including Entamoeba species are common. The main aim of this study was to identify species of Entamoeba using genotypic analysis. The prevalence of Entamoeba infections was examined by PCR in fecal samples from 143 inhabitants living close to wild rhesus macaques in Kathmandu, Nepal. The numbers of positive cases were one (0.7%) for E. histolytica, eight (5.6%) for E. dispar, seven (4.9%) for E. coli, and two (1.4%) for E. chattoni (E. polecki ST2). No infections with E. nuttalli, E. moshkovskii, and E. polecki ST1 were found. In E. dispar, at least seven different genotypes were detected from the eight samples by sequence analysis of tRNA-linked short tandem repeats. Different genotypes were found even in a couple from the same family. This is the first report demonstrating that E. dispar with high genotypic diversity is prevalent, rather than E. histolytica, in Kathmandu, and that zoonotic transmission of E. chattoni from rhesus macaques might occur in the inhabitants.


Asunto(s)
Entamoeba/clasificación , Entamoeba/aislamiento & purificación , Entamebiasis/epidemiología , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Animales , Niño , Preescolar , Entamoeba/genética , Entamebiasis/parasitología , Escherichia coli/genética , Heces/parasitología , Femenino , Genotipo , Humanos , Lactante , Macaca mulatta/parasitología , Masculino , Repeticiones de Microsatélite/genética , Persona de Mediana Edad , Nepal/epidemiología , Filogenia , Reacción en Cadena de la Polimerasa , Prevalencia , ARN de Transferencia/genética , Adulto Joven
6.
Adv Exp Med Biol ; 1018: 193-205, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-29052139

RESUMEN

Parasitic infection remains as a persistent public health problem and can be carcinogenic. Three helminth parasites, namely, Clonorchis sinensis (liver fluke) and Opisthorchis viverrini as well as Schistosoma haematobium (blood fluke), are classified as Group 1 carcinogens by the World Health Organization's International Agency for Research on Cancer (IARC Infection with liver flukes (Opisthorchis viverrini, Opisthorchis felineus and Clonorchis sinensis), World Health Organization, International Agency for Research on Cancer, 2011). Infection by these parasites is frequently asymptomatic and is thus rarely diagnosed at early exposure. Persistent infection can cause severe cancer complications. Until now, the cellular and molecular mechanisms linking fluke infections to cancer formation have yet to be defined, although many studies have focused on these mechanisms in recent years, and numerous findings were made in various aspects of parasite-associated cancers. Herein, we only introduce the fluke-induced cholangiocarcinoma (CCA) and bladder carcinoma and mainly focus on key findings in the last 5 years.


Asunto(s)
Carcinogénesis/genética , Fasciola hepatica/patogenicidad , Enfermedades Parasitarias/epidemiología , Neoplasias de la Vejiga Urinaria/epidemiología , Animales , Clonorchis sinensis/patogenicidad , Humanos , Opisthorchis/patogenicidad , Enfermedades Parasitarias/parasitología , Schistosoma haematobium/patogenicidad , Neoplasias de la Vejiga Urinaria/complicaciones , Neoplasias de la Vejiga Urinaria/parasitología
7.
Anal Biochem ; 509: 67-72, 2016 09 15.
Artículo en Inglés | MEDLINE | ID: mdl-27372609

RESUMEN

In reverse-phase protein arrays (RPPA), one immobilizes complex samples (e.g., cellular lysate, tissue lysate or serum etc.) on solid supports and performs parallel reactions of antibodies with immobilized protein targets from the complex samples. In this work, we describe a label-free detection of RPPA that enables quantification of RPPA data and thus facilitates comparison of studies performed on different samples and on different solid supports. We applied this detection platform to characterization of phosphoserine aminotransferase (PSAT) expression levels in Acanthamoeba lysates treated with artemether and the results were confirmed by Western blot studies.


Asunto(s)
Acanthamoeba castellanii/metabolismo , Análisis por Matrices de Proteínas/métodos , Proteínas Protozoarias/metabolismo , Acanthamoeba castellanii/química , Proteínas Protozoarias/química
8.
J Eukaryot Microbiol ; 63(5): 572-7, 2016 09.
Artículo en Inglés | MEDLINE | ID: mdl-26861809

RESUMEN

Unique species of macaques are distributed across Sulawesi Island, Indonesia, and the details of Entamoeba infections in these macaques are unknown. A total of 77 stool samples from Celebes crested macaques (Macaca nigra) and 14 stool samples from pigs were collected in Tangkoko Nature Reserve, North Sulawesi, and the prevalence of Entamoeba infection was examined by PCR. Entamoeba polecki was detected in 97% of the macaques and all of the pigs, but no other Entamoeba species were found. The nucleotide sequence of the 18S rRNA gene in E. polecki from M. nigra was unique and showed highest similarity with E. polecki subtype (ST) 4. This is the first case of identification of E. polecki ST4 from wild nonhuman primates. The sequence of the 18S rRNA gene in E. polecki from pigs was also unique and showed highest similarity with E. polecki ST1. These results suggest that the diversity of the 18S rRNA gene in E. polecki is associated with differences in host species and geographic localization, and that there has been no transmission of E. polecki between macaques and pigs in the study area.


Asunto(s)
Entamoeba/genética , Entamoeba/aislamiento & purificación , Entamebiasis/parasitología , Macaca/parasitología , ARN Ribosómico 18S/genética , Porcinos/parasitología , Animales , Secuencia de Bases , Conservación de los Recursos Naturales , ADN Protozoario , Entamoeba/clasificación , Entamoeba/citología , Entamebiasis/epidemiología , Entamebiasis/transmisión , Entamebiasis/veterinaria , Genes Protozoarios , Genoma de Protozoos , Indonesia/epidemiología , Filogenia , Reacción en Cadena de la Polimerasa , Prevalencia , Alineación de Secuencia , Análisis de Secuencia de ADN , Especificidad de la Especie , Enfermedades de los Porcinos/epidemiología , Enfermedades de los Porcinos/parasitología
9.
J Eukaryot Microbiol ; 63(2): 171-80, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-26333681

RESUMEN

We have proposed the revival of the name Entamoeba nuttalli for a virulent ameba strain, P19-061405, from a rhesus macaque and located it phylogenetically between E. histolytica and E. dispar. As E. nuttalli was originally described for an ameba found in a toque macaque in Sri Lanka, the prevalence and characteristics of Entamoeba species in wild toque macaques were examined. PCR analysis of 227 stool samples from six locations showed positive rates for E. nuttalli, E. dispar, and E. histolytica of 18.5%, 0.4%, and 0%, respectively. Fifteen E. nuttalli strains were cultured successfully from five locations. The 18S ribosomal RNA gene showed only three nucleotide differences in comparison with P19-061405 strain. In isoenzyme analysis, the pattern of hexokinase in Sri Lankan strains was different from that of P19-061405 strains and the difference was confirmed by analysis of the genes. Hepatic inoculation of one of the Sri Lankan E. nuttalli strains in hamsters resulted in amebic abscess formation and body weight loss. These results demonstrate that E. nuttalli is prevalent in wild toque macaques and that several characteristics of the strains are unique. We conclude that use of the name E. nuttalli is appropriate for the new Entamoeba species found in nonhuman primates.


Asunto(s)
Entamoeba/enzimología , Entamoeba/aislamiento & purificación , Entamebiasis/veterinaria , Hexoquinasa/metabolismo , Macaca/parasitología , Enfermedades de los Monos/parasitología , Animales , Cricetinae , ADN Protozoario/genética , Entamoeba/genética , Entamebiasis/parasitología , Genotipo , Hexoquinasa/genética , Hexoquinasa/aislamiento & purificación , Isoenzimas , Masculino , Mesocricetus , Filogenia , Reacción en Cadena de la Polimerasa/métodos , Polimorfismo Genético , Prevalencia , Sri Lanka
10.
Antimicrob Agents Chemother ; 59(8): 4680-8, 2015 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-26014935

RESUMEN

Acanthamoeba sp. parasites are the causative agents of Acanthamoeba keratitis, fatal granulomatous amoebic encephalitis, and cutaneous infections. However, there are currently no effective drugs for these organisms. Here, we evaluated the activity of the antimalarial agent artemether against Acanthamoeba castellanii trophozoites and identified potential targets of this agent through a proteomic approach. Artemether exhibited in vitro amoebicidal activity in a time- and dose-dependent manner and induced ultrastructural modification and cell apoptosis. The iTRAQ quantitative proteomic analysis identified 707 proteins that were differentially expressed after artemether treatment. We focused on phosphoglycerate dehydrogenase and phosphoserine aminotransferase in the serine biosynthesis pathway because of their importance to the growth and proliferation of protozoan and cancer cells. The expression of these proteins in Acanthamoeba was validated using quantitative real-time PCR and Western blotting after artemether treatment. The changes in the expression levels of phosphoserine aminotransferase were consistent with those of phosphoglycerate dehydrogenase. Therefore, the downregulation of phosphoserine aminotransferase may be due to the downregulation of phosphoglycerate dehydrogenase. Furthermore, exogenous serine might antagonize the activity of artemether against Acanthamoeba trophozoites. These results indicate that the serine biosynthesis pathway is important to amoeba survival and that targeting these enzymes would improve the treatment of Acanthamoeba infections. Artemether may be used as a phosphoglycerate dehydrogenase inhibitor to control or block Acanthamoeba infections.


Asunto(s)
Acanthamoeba castellanii/efectos de los fármacos , Amebicidas/farmacología , Antimaláricos/farmacología , Artemisininas/farmacología , Vías Biosintéticas/efectos de los fármacos , Serina/metabolismo , Queratitis por Acanthamoeba/tratamiento farmacológico , Queratitis por Acanthamoeba/metabolismo , Queratitis por Acanthamoeba/parasitología , Acanthamoeba castellanii/metabolismo , Amebiasis/tratamiento farmacológico , Amebiasis/metabolismo , Amebiasis/parasitología , Animales , Apoptosis/efectos de los fármacos , Arteméter , Proliferación Celular/efectos de los fármacos , Encefalitis/tratamiento farmacológico , Encefalitis/metabolismo , Encefalitis/parasitología , Fosfoglicerato-Deshidrogenasa/metabolismo , Proteómica/métodos , Transaminasas/metabolismo , Trofozoítos/parasitología
11.
Antimicrob Agents Chemother ; 59(2): 818-25, 2015 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-25403663

RESUMEN

The emergence and transmission of extensively drug-resistant tuberculosis (XDR-TB) pose an increasing threat to global TB control. This study aimed to identify the patterns of evolution and transmission dynamics of XDR-TB in populations in a region of China where TB is highly endemic. We analyzed a total of 95 XDR-TB isolates collected from 2003 to 2009 in Chongqing, China. Eight drug resistance genes covering 7 drugs that define XDR-TB were amplified by PCR followed by DNA sequencing. Variable-number tandem repeat 16-locus (VNTR-16) genotyping and genotypic drug resistance profiles were used to determine the evolution or transmission patterns of XDR-TB strains. Our results indicated that the Beijing genotype was predominant (85/95 [89.5%]) in XDR-TB strains, and as many as 40.0% (38/95) of the isolates were distributed into 6 clusters based on VNTR-16 genotyping and drug resistance mutation profiles. All isolates of each cluster harbored as many as six identical resistance mutations in the drug resistance genes rpoB, katG, inhA promoter, embB, rpsL, and gidB. Among the nine cases with continuous isolates from multidrug-resistant (MDR) to XDR-TB, 4 cases represented acquired drug resistance, 4 cases were caused by transmission, and 1 case was due to exogenous superinfection. The XDR-TB epidemic in China is mainly caused by a high degree of clonal transmission, but evolution from MDR to XDR and even superinfection with a new XDR strain can also occur.


Asunto(s)
Evolución Biológica , Tuberculosis Extensivamente Resistente a Drogas/transmisión , Tuberculosis Resistente a Múltiples Medicamentos/transmisión , Antituberculosos/uso terapéutico , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , China/epidemiología , Farmacorresistencia Bacteriana Múltiple/genética , Tuberculosis Extensivamente Resistente a Drogas/tratamiento farmacológico , Genotipo , Humanos , Reacción en Cadena de la Polimerasa , Tuberculosis Resistente a Múltiples Medicamentos/tratamiento farmacológico
12.
J Med Virol ; 87(11): 1867-71, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-25959799

RESUMEN

Acute respiratory tract infection is a major cause of morbidity and mortality worldwide, particularly in infants and young children. High-throughput, accurate, broad-range tools for etiologic diagnosis are critical for effective epidemic control. In this study, the diagnostic capacities of an Ibis platform based on the PCR/ESI-MS assay were evaluated using clinical samples. Nasopharyngeal aspirates (NPAs) were collected from 120 children (<5 years old) who were hospitalized with lower respiratory tract infections between November 2010 and October 2011. The respiratory virus detection assay was performed using the PCR/ESI-MS assay and the DFA. The discordant PCR/ESI-MS and DFA results were resolved with RT-PCR plus sequencing. The overall agreement for PCR/ESI-MS and DFA was 98.3% (118/120). Compared with the results from DFA, the sensitivity and specificity of the PCR/ESI-MS assay were 100% and 97.5%, respectively. The PCR/ESI-MS assay also detected more multiple virus infections and revealed more detailed subtype information than DFA. Among the 12 original specimens with discordant results between PCR/ESI-MS and DFA, 11 had confirmed PCR/ESI-MS results. Thus, the PCR/ESI-MS assay is a high-throughput, sensitive, specific and promising method to detect and subtype conventional viruses in respiratory tract infections and allows rapid identification of mixed pathogens.


Asunto(s)
Nasofaringe/virología , Reacción en Cadena de la Polimerasa/métodos , Infecciones del Sistema Respiratorio/diagnóstico , Espectrometría de Masa por Ionización de Electrospray/métodos , Virosis/diagnóstico , Virus/clasificación , Virus/aislamiento & purificación , Preescolar , Técnicas de Laboratorio Clínico/métodos , Femenino , Técnica del Anticuerpo Fluorescente Directa , Humanos , Lactante , Masculino , Infecciones del Sistema Respiratorio/virología , Sensibilidad y Especificidad , Virología/métodos , Virosis/virología
13.
Parasitol Res ; 114(4): 1387-95, 2015 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-25622549

RESUMEN

Free-living amoebae of the genus Acanthamoeba are widespread protozoans that can cause serious infectious diseases. This study characterised phosphoglycerate dehydrogenase (PGDH) and phosphoserine aminotransferase (PSAT) in the phosphorylated serine biosynthetic pathway of Acanthamoeba castellanii. The PGDH gene encodes a protein of 442 amino acids with a calculated molecular weight of 47.7 kDa and an isoelectric point (pI) of 7.64. Meanwhile, the PSAT gene encodes a protein of 394 amino acids with a calculated molecular weight of 43.8 kDa and a pI of 5.80. Confocal microscopy suggests that PGDH is mainly diffused in the cytoplasm, whereas PSAT is located in the inner part of the cell membrane. The messenger RNA (mRNA) expression levels of PGDH and PSAT vary depending on growth state under consecutive culture conditions. No significant changes in the mRNA expression levels of both PGDH and PSAT occur after the incubation of L-serine with Acanthamoeba. This result indicates that exogenous serine exerts no influence on the expression of these genes and that the so-called feedback inhibition of both PGDH and PSAT in Acanthamoeba differs from that in bacteria or other organisms. We propose that the enzymes in the phosphorylated serine biosynthetic pathway function in amoeba growth and proliferation.


Asunto(s)
Acanthamoeba castellanii/enzimología , Proteínas Bacterianas/genética , Clonación Molecular , Fosfoglicerato-Deshidrogenasa/genética , Serina/biosíntesis , Transaminasas/genética , Acanthamoeba castellanii/química , Acanthamoeba castellanii/genética , Secuencia de Aminoácidos , Proteínas Bacterianas/química , Proteínas Bacterianas/metabolismo , Secuencia de Bases , Vías Biosintéticas , Regulación Bacteriana de la Expresión Génica , Datos de Secuencia Molecular , Peso Molecular , Fosfoglicerato-Deshidrogenasa/química , Fosfoglicerato-Deshidrogenasa/metabolismo , Transaminasas/química , Transaminasas/metabolismo
14.
Anal Chem ; 86(12): 5815-21, 2014 Jun 17.
Artículo en Inglés | MEDLINE | ID: mdl-24857567

RESUMEN

Airborne Mycobacterium tuberculosis is the main source of tuberculosis infection, which is known as one of the worldwide infectious diseases. Direct capture and analysis of airborne Mycobacterium tuberculosis is essential for disease prevention and control. At present, low concentration of pathogens directly collected from the air is the major drawback for rapid analysis. Herein an integrated microfluidic system capable of airborne Mycobacterium tuberculosis capture, enrichment, and rapid bacteriological immunoassay was developed. The whole detection time was decreased to less than 50 min including 20 min of enrichment and 30 min of immunoreaction analysis. It had the advantages of low detection limit, fast detection speed, and low reagent consumption compared with conventional techniques, showing the potential to become a new airborne pathogen analysis platform.


Asunto(s)
Microbiología del Aire , Microfluídica/instrumentación , Mycobacterium tuberculosis/aislamiento & purificación , Inmunoensayo
15.
Parasitol Res ; 113(1): 367-74, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-24185530

RESUMEN

Several polymorphic markers, including serine-rich protein genes, have been used for the genotyping of isolates from the morphologically indistinguishable protozoan parasites Entamoeba histolytica, Entamoeba dispar, and Entamoeba nuttalli. Genotypes of tRNA-linked short tandem repeats (STRs) are highly polymorphic, but the correlation with geographical distribution is unknown. We have recently isolated 15 E. nuttalli strains from wild rhesus macaques in four locations in Kathmandu Valley, Nepal. The sequences of the serine-rich protein genes of the E. nuttalli strains differed among the four locations. In this study, we analyzed tRNA-linked STRs in six loci of the 15 strains. Two genotypes were found in loci N-K2, R-R, and S(TGA)-D, three in locus S-Q, and five in locus D-A. In locus A-L, one major genotype and ten minor genotypes were found, resulting in mixtures of two to six genotypes in eight strains. By combination of the main genotypes in the six loci, the 15 strains were divided into nine genotypes. The genotypes observed in E. nuttalli strains were quite different from those in E. histolytica and E. dispar. A phylogenetic tree constructed from tRNA-linked STRs in the six loci reflected the different places of isolation. These results suggest that sequence diversity of tRNA-linked STRs in E. nuttalli occurs with relatively high frequency and might be a marker of geographical distribution of host rhesus macaques, even in limited areas.


Asunto(s)
Entamoeba/genética , Genotipo , Macaca mulatta/parasitología , Repeticiones de Microsatélite , ARN de Transferencia/genética , Animales , Entamoeba/aislamiento & purificación , Entamebiasis/parasitología , Sitios Genéticos , Nepal , Filogenia , ARN Protozoario/genética
16.
Drug Discov Ther ; 18(3): 178-187, 2024 Jul 09.
Artículo en Inglés | MEDLINE | ID: mdl-38777764

RESUMEN

In humans, Entamoeba histolytica is the main pathogen causing various amoebiases, while E. moshkovskii falls between being a pathogen and non-pathogen. The two species have similar behavior patterns but differ significantly in pathogenicity, with previous studies and clinical data indicating that E. moshkovskii has a low level of pathogenicity. Meaningfully, the biological characteristics of E. moshkovskii make it a potential model organism and a protein display platform for studying the functions of important Entamoeba proteins. Here, an Amoeba-pcDNA3.1 vector capable of overexpressing E. histolytica-sourced Igl-C protein was constructed and successfully transfected into E. moshkovskii. High levels of expression of the Igl-C, EGFP, and NeoR genes were identified in Igl-C-transfected trophozoites using qRT-PCR, and they were subsequently confirmed using immunoblotting. Transfection of Igl-C protein improved the adherence and phagocytosis of E. moshkovskii, demonstrating that E. histolytica Igl mediated amoebic adhesion. Moreover, as a manifestation of protein virulence, the ability of post-transfected trophozoites to induce inflammation in host macrophages was also enhanced. In conclusion, this study utilizing the characteristics of E. moshkovskii confirmed its potential to serve as a model organism. E. moshkovskii could replace E. histolytica as the target of gene editing, allowing more efficient study of amoebic pathogenicity.


Asunto(s)
Entamoeba histolytica , Entamoeba , Proteínas Protozoarias , Trofozoítos , Entamoeba/genética , Entamoeba/patogenicidad , Proteínas Protozoarias/genética , Proteínas Protozoarias/metabolismo , Entamoeba histolytica/genética , Entamoeba histolytica/patogenicidad , Entamoeba histolytica/metabolismo , Trofozoítos/metabolismo , Fagocitosis , Lectinas/metabolismo , Lectinas/genética , Humanos , Animales , Transfección , Virulencia/genética , Entamebiasis/parasitología , Ratones
17.
Front Cell Infect Microbiol ; 14: 1414135, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38863831

RESUMEN

Introduction: Acanthamoeba infection is a serious public health concern, necessitating the development of effective and safe anti-Acanthamoeba chemotherapies. Poly (ADP-ribose) polymerases (PARPs) govern a colossal amount of biological processes, such as DNA damage repair, protein degradation and apoptosis. Multiple PARP-targeted compounds have been approved for cancer treatment. However, repurposing of PARP inhibitors to treat Acanthamoeba is poorly understood. Methods: In the present study, we attempted to fill these knowledge gaps by performing anti-Acanthamoeba efficacy assays, cell biology experiments, bioinformatics, and transcriptomic analyses. Results: Using a homology model of Acanthamoeba poly (ADP-ribose) polymerases (PARPs), molecular docking of approved drugs revealed three potential inhibitory compounds: olaparib, venadaparib and AZ9482. In particular, venadaparib exhibited superior docking scores (-13.71) and favorable predicted binding free energy (-89.28 kcal/mol), followed by AZ9482, which showed a docking score of -13.20 and a binding free energy of -92.13 kcal/mol. Notably, the positively charged cyclopropylamine in venadaparib established a salt bridge (through E535) and a hydrogen bond (via N531) within the binding pocket. For comparison, AZ9482 was well stacked by the surrounding aromatic residues including H625, Y652, Y659 and Y670. In an assessment of trophozoites viability, AZ9482 exhibited a dose-and time-dependent anti-trophozoite effect by suppressing Acanthamoeba PARP activity, unlike olaparib and venadaparib. An Annexin V-fluorescein isothiocyanate/propidium iodide apoptosis assay revealed AZ9482 induced trophozoite necrotic cell death rather than apoptosis. Transcriptomics analyses conducted on Acanthamoeba trophozoites treated with AZ9482 demonstrated an atlas of differentially regulated proteins and genes, and found that AZ9482 rapidly upregulates a multitude of DNA damage repair pathways in trophozoites, and intriguingly downregulates several virulent genes. Analyzing gene expression related to DNA damage repair pathway and the rate of apurinic/apyrimidinic (AP) sites indicated DNA damage efficacy and repair modulation in Acanthamoeba trophozoites following AZ9482 treatment. Discussion: Collectively, these findings highlight AZ9482, as a structurally unique PARP inhibitor, provides a promising prototype for advancing anti-Acanthamoeba drug research.


Asunto(s)
Simulación del Acoplamiento Molecular , Inhibidores de Poli(ADP-Ribosa) Polimerasas , Inhibidores de Poli(ADP-Ribosa) Polimerasas/farmacología , Humanos , Piperazinas/farmacología , Ftalazinas/farmacología , Ftalazinas/química , Reposicionamiento de Medicamentos , Poli(ADP-Ribosa) Polimerasas/metabolismo , Acanthamoeba/efectos de los fármacos , Biología Computacional , Apoptosis/efectos de los fármacos , Perfilación de la Expresión Génica , Antiprotozoarios/farmacología , Trofozoítos/efectos de los fármacos
18.
Drug Discov Ther ; 18(1): 10-15, 2024 Mar 20.
Artículo en Inglés | MEDLINE | ID: mdl-38355121

RESUMEN

A fluorescence immunochromatography (FIC) kit was developed recently using fluorescent silica nanoparticles coated with a recombinant C-terminal fragment of the surface lectin intermediate subunit (C-Igl) of Entamoeba histolytica to establish rapid serodiagnosis of amebiasis. We further evaluated the system using serum samples from 52 Thai patients with amebiasis. Of the patients, 50 (96%) tested positive using FIC. The samples were also tested using enzyme-linked immunosorbent assay (ELISA) with C-Igl as the antigen. Two samples were negative on ELISA but positive on FIC. The correlation coefficient between the fluorescence intensity using FIC and the optical density value using ELISA was 0.5390, indicating a moderate correlation between the two tests. Serum samples from 20 patients with malaria and 22 patients with Clostridioides difficile infection were also tested using FIC. The false-positive rates were 4/20 (20%) and 1/22 (4%) in patients with malaria and C. difficile infection, respectively. Combining the data from the present study with our previous study, the sensitivity and specificity of FIC were determined to be 98.5% and 95.2%, respectively. The results of the 50 samples were studied using a fluorescence scope and a fluorescence intensity reader, and the findings were compared. Disagreements were found in only two samples showing near-borderline fluorescence intensity, indicating that the use of scope was adequate for judging the results. These results demonstrate that FIC is a simple and rapid test for the serodiagnosis of amebiasis.


Asunto(s)
Amebiasis , Clostridioides difficile , Entamebiasis , Malaria , Nanopartículas , Humanos , Entamebiasis/diagnóstico , Dióxido de Silicio , Tailandia , Amebiasis/diagnóstico , Ensayo de Inmunoadsorción Enzimática/métodos , Pruebas Serológicas/métodos , Sensibilidad y Especificidad
19.
BMC Microbiol ; 13: 31, 2013 Feb 08.
Artículo en Inglés | MEDLINE | ID: mdl-23391153

RESUMEN

BACKGROUND: Shigella is a major pathogen responsible for bacillary dysentery, a severe form of shigellosis. Severity of the disease depends on the virulence of the infecting strain. Shigella pathogenicity is a multi-gene phenomenon, involving the participation of genes on an unstable large virulence plasmid and chromosomal pathogenicity islands. RESULTS: A multiplex PCR (mPCR) assay was developed to detect S. flexneri 2a from rural regions of Zhengding (Hebei Province, China). We isolated and tested 86 strains using our mPCR assay, which targeted the ipaH, ial and set1B genes. A clinical strain of S. flexneri 2a 51 (SF51) containing ipaH and ial, but lacking set1B was found. The virulence of this strain was found to be markedly decreased. Further testing showed that the SF51 strain lacked pic. To investigate the role of pic in S. flexneri 2a infections, a pic knockout mutant (SF301-∆ pic) and two complementation strains, SF301-∆ pic/pPic and SF51/pPic, were created. Differences in virulence for SF51, SF301-∆ pic, SF301-∆ pic/pPic, SF51/pPic and S. flexneri 2a 301 (SF301) were compared. Compared with SF301, both SF51 and SF301-∆ pic exhibited lower levels of Hela cell invasion and resulted in reduced keratoconjunctivitis, with low levels of tissue damage seen in murine eye sections. The virulence of SF301-∆ pic and SF51 was partially recovered in vitro and in vivo through the addition of a complementary pic gene. CONCLUSIONS: The pic gene appears to be involved in an increase in pathogenicity of S. flexneri 2a. This gene assists with bacterial invasion into host cells and alters inflammatory reactions.


Asunto(s)
Proteínas Bacterianas/metabolismo , Disentería Bacilar/patología , Eliminación de Gen , Serina Proteasas/metabolismo , Shigella flexneri/patogenicidad , Factores de Virulencia/metabolismo , Animales , Proteínas Bacterianas/genética , China , Modelos Animales de Enfermedad , Disentería Bacilar/microbiología , Endocitosis , Células Epiteliales/microbiología , Ojo/patología , Femenino , Prueba de Complementación Genética , Células HeLa , Histocitoquímica , Humanos , Queratoconjuntivitis/microbiología , Queratoconjuntivitis/patología , Ratones , Ratones Endogámicos BALB C , Reacción en Cadena de la Polimerasa , Población Rural , Serina Proteasas/genética , Shigella flexneri/genética , Shigella flexneri/aislamiento & purificación , Virulencia , Factores de Virulencia/genética
20.
Clin Dev Immunol ; 2013: 475809, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-23861692

RESUMEN

Human anthrax infection caused by exposure to Bacillus anthracis cannot always be treated by antibiotics. This is mostly because of the effect of the remaining anthrax toxin in the body. Lethal factor (LF) is a component of lethal toxin (LeTx), which is the major virulence of anthrax toxin. A murine IgG monoclonal antibody (mAb) against LF with blocking activity (coded LF8) was produced in a previous study. In this report, a human/murine chimeric Fab mAb (coded LF8-Fab) was developed from LF8 by inserting murine variable regions into human constant regions using antibody engineering to reduce the incompatibility of the murine antibody for human use. The LF8-Fab expressed in Escherichia coli could specifically identify LF with an affinity of 3.46 × 10(7) L/mol and could neutralize LeTx with an EC50 of 85 µ g/mL. Even after LeTx challenge at various time points, the LF8-Fab demonstrated protection of J774A.1 cells in vitro. The results suggest that the LF8-Fab might be further characterized and potentially be used for clinical applications against anthrax infection.


Asunto(s)
Anticuerpos Neutralizantes/farmacología , Bacillus anthracis/efectos de los fármacos , Toxinas Bacterianas/antagonistas & inhibidores , Fragmentos Fab de Inmunoglobulinas/farmacología , Macrófagos/efectos de los fármacos , Secuencia de Aminoácidos , Animales , Anticuerpos Neutralizantes/genética , Anticuerpos Neutralizantes/inmunología , Afinidad de Anticuerpos , Especificidad de Anticuerpos , Antígenos Bacterianos/inmunología , Bacillus anthracis/crecimiento & desarrollo , Bacillus anthracis/inmunología , Toxinas Bacterianas/inmunología , Secuencia de Bases , Línea Celular , Escherichia coli/genética , Expresión Génica , Fragmentos Fab de Inmunoglobulinas/genética , Fragmentos Fab de Inmunoglobulinas/inmunología , Macrófagos/inmunología , Macrófagos/microbiología , Ratones , Datos de Secuencia Molecular , Ingeniería de Proteínas , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/inmunología , Proteínas Recombinantes de Fusión/farmacología
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