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1.

HLA class I signal peptide polymorphism determines the level of CD94/NKG2-HLA-E-mediated regulation of effector cell responses.

Lin, Zhansong; Bashirova, Arman A; Viard, Mathias; Garner, Lee; Quastel, Max; Beiersdorfer, Maya; Kasprzak, Wojciech K; Akdag, Marjan; Yuki, Yuko; Ojeda, Pedro; Das, Sudipto; Andresson, Thorkell; Naranbhai, Vivek; Horowitz, Amir; McMichael, Andrew J; Hoelzemer, Angelique; Gillespie, Geraldine M; Garcia-Beltran, Wilfredo F; Carrington, Mary.

Nat Immunol ; 24(7): 1087-1097, 2023 07.

Artículo en Inglés | MEDLINE | ID: mdl-37264229

2.

hRpn13 shapes the proteome and transcriptome through epigenetic factors HDAC8, PADI4, and transcription factor NF-κB p50.

Osei-Amponsa, Vasty; Chandravanshi, Monika; Lu, Xiuxiu; Magidson, Valentin; Das, Sudipto; Andresson, Thorkell; Dyba, Marzena; Sabbasani, Venkata R; Swenson, Rolf E; Fromont, Caroline; Shrestha, Biraj; Zhao, Yongmei; Clapp, Michelle E; Chari, Raj; Walters, Kylie J.

Mol Cell ; 84(3): 522-537.e8, 2024 Feb 01.

Artículo en Inglés | MEDLINE | ID: mdl-38151017

3.

SARS-CoV-2 papain-like protease plays multiple roles in regulating cellular proteins in the endoplasmic reticulum.

Yang, Mei; Mariano, Jennifer; Su, Rebecca; Smith, Christopher E; Das, Sudipto; Gill, Catherine; Andresson, Thorkell; Loncarek, Jadranka; Tsai, Yien Che; Weissman, Allan M.

J Biol Chem ; 299(12): 105346, 2023 Dec.

Artículo en Inglés | MEDLINE | ID: mdl-37838170

4.

Fractional Quantum Hall States of the A Phase in the Second Landau Level.

Das, Sudipto; Das, Sahana; Mandal, Sudhansu S.

Phys Rev Lett ; 132(10): 106501, 2024 Mar 08.

Artículo en Inglés | MEDLINE | ID: mdl-38518319

5.

The role of transcription factors in the acquisition of the four latest proposed hallmarks of cancer and corresponding enabling characteristics.

Morgan, Maria P; Finnegan, Ellen; Das, Sudipto.

Semin Cancer Biol ; 86(Pt 3): 1203-1215, 2022 11.

Artículo en Inglés | MEDLINE | ID: mdl-36244529

6.

Anomalous Reentrant 5/2 Quantum Hall Phase at Moderate Landau-Level-Mixing Strength.

Das, Sudipto; Das, Sahana; Mandal, Sudhansu S.

Phys Rev Lett ; 131(5): 056202, 2023 Aug 04.

Artículo en Inglés | MEDLINE | ID: mdl-37595232

7.

Fam60a defines a variant Sin3a-Hdac complex in embryonic stem cells required for self-renewal.

Streubel, Gundula; Fitzpatrick, Darren J; Oliviero, Giorgio; Scelfo, Andrea; Moran, Bruce; Das, Sudipto; Munawar, Nayla; Watson, Ariane; Wynne, Kieran; Negri, Gian Luca; Dillon, Eugene T; Jammula, SriGanesh; Hokamp, Karsten; O'Connor, Darran P; Pasini, Diego; Cagney, Gerard; Bracken, Adrian P.

EMBO J ; 36(15): 2216-2232, 2017 08 01.

Artículo en Inglés | MEDLINE | ID: mdl-28554894

8.

An Insight Into the Driver Mutations and Molecular Mechanisms Underlying Mucinous Adenocarcinoma of the Rectum.

Reynolds, Ian S; O'Connell, Emer; Fichtner, Michael; Blümel, Anna; Mason, Sam E; Kinross, James; McNamara, Deborah A; Kay, Elaine W; O'Connor, Darran P; Das, Sudipto; Burke, John P; Prehn, Jochen H M.

Dis Colon Rectum ; 64(6): 677-688, 2021 06 01.

Artículo en Inglés | MEDLINE | ID: mdl-33955407

9.

Decreased Antibiotic Susceptibility Driven by Global Remodeling of the Klebsiella pneumoniae Proteome.

Keasey, Sarah L; Suh, Moo-Jin; Das, Sudipto; Blancett, Candace D; Zeng, Xiankun; Andresson, Thorkell; Sun, Mei G; Ulrich, Robert G.

Mol Cell Proteomics ; 18(4): 657-668, 2019 04.

Artículo en Inglés | MEDLINE | ID: mdl-30617156

10.

FKBPL-based peptide, ALM201, targets angiogenesis and cancer stem cells in ovarian cancer.

Annett, Stephanie; Moore, Gillian; Short, Amy; Marshall, Andrea; McCrudden, Cian; Yakkundi, Anita; Das, Sudipto; McCluggage, W Glenn; Nelson, Laura; Harley, Ian; Moustafa, Nermeen; Kennedy, Catherine J; deFazio, Anna; Brand, Alison; Sharma, Raghwa; Brennan, Donal; O'Toole, Sharon; O'Leary, John; Bates, Mark; O'Riain, Ciarán; O'Connor, Darran; Furlong, Fiona; McCarthy, Helen; Kissenpfennig, Adrien; McClements, Lana; Robson, Tracy.

Br J Cancer ; 122(3): 361-371, 2020 02.

Artículo en Inglés | MEDLINE | ID: mdl-31772325

11.

Das et al. Reply.

Das, Sudipto; Das, Sahana; Mandal, Sudhansu S.

Phys Rev Lett ; 132(2): 029602, 2024 Jan 12.

Artículo en Inglés | MEDLINE | ID: mdl-38277593

12.

Functional characterization of a chr13q22.1 pancreatic cancer risk locus reveals long-range interaction and allele-specific effects on DIS3 expression.

Hoskins, Jason W; Ibrahim, Abdisamad; Emmanuel, Mickey A; Manmiller, Sarah M; Wu, Yinglun; O'Neill, Maura; Jia, Jinping; Collins, Irene; Zhang, Mingfeng; Thomas, Janelle V; Rost, Lauren M; Das, Sudipto; Parikh, Hemang; Haake, Jefferson M; Matters, Gail L; Kurtz, Robert C; Bamlet, William R; Klein, Alison; Stolzenberg-Solomon, Rachael; Wolpin, Brian M; Yarden, Ronit; Wang, Zhaoming; Smith, Jill; Olson, Sara H; Andresson, Thorkell; Petersen, Gloria M; Amundadottir, Laufey T.

Hum Mol Genet ; 25(21): 4726-4738, 2016 11 01.

Artículo en Inglés | MEDLINE | ID: mdl-28172817

13.

Abatacept reduces disease activity and ultrasound power Doppler in ACPA-negative undifferentiated arthritis: a proof-of-concept clinical and imaging study.

Buch, Maya H; Hensor, Elizabeth M A; Rakieh, Chadi; Freeston, Jane E; Middleton, Edward; Horton, Sarah; Das, Sudipto; Peterfy, Charles; Tan, Ai Lyn; Wakefield, Richard J; Emery, Paul.

Rheumatology (Oxford) ; 56(1): 58-67, 2017 01.

Artículo en Inglés | MEDLINE | ID: mdl-28028155

14.

Differential DNA methylation profiles of coding and non-coding genes define hippocampal sclerosis in human temporal lobe epilepsy.

Miller-Delaney, Suzanne F C; Bryan, Kenneth; Das, Sudipto; McKiernan, Ross C; Bray, Isabella M; Reynolds, James P; Gwinn, Ryder; Stallings, Raymond L; Henshall, David C.

Brain ; 138(Pt 3): 616-31, 2015 Mar.

Artículo en Inglés | MEDLINE | ID: mdl-25552301

15.

Repeat cycles of rituximab on clinical relapse in ANCA-associated vasculitis: identifying B cell biomarkers for relapse to guide retreatment decisions.

Md Yusof, Md Yuzaiful; Vital, Edward M; Das, Sudipto; Dass, Shouvik; Arumugakani, Gururaj; Savic, Sinisa; Rawstron, Andrew C; Emery, Paul.

Ann Rheum Dis ; 74(9): 1734-8, 2015 Sep.

Artículo en Inglés | MEDLINE | ID: mdl-25854586

16.

Proteomic screening of human targets of viral microRNAs reveals functions associated with immune evasion and angiogenesis.

Gallaher, Amelia M; Das, Sudipto; Xiao, Zhen; Andresson, Thorkell; Kieffer-Kwon, Philippe; Happel, Christine; Ziegelbauer, Joseph.

PLoS Pathog ; 9(9): e1003584, 2013.

Artículo en Inglés | MEDLINE | ID: mdl-24039573

17.

Peptide neurotransmitters activate a cation channel complex of NALCN and UNC-80.

Lu, Boxun; Su, Yanhua; Das, Sudipto; Wang, Haikun; Wang, Yan; Liu, Jin; Ren, Dejian.

Nature ; 457(7230): 741-4, 2009 Feb 05.

Artículo en Inglés | MEDLINE | ID: mdl-19092807

18.

Abatacept or tocilizumab after rituximab in rheumatoid arthritis? An exploratory study suggests non-response to rituximab is associated with persistently high IL-6 and better clinical response to IL-6 blocking therapy.

Das, Sudipto; Vital, Edward M; Horton, Sarah; Bryer, Domini; El-Sherbiny, Yasser; Rawstron, Andrew C; Ponchel, Frederique; Emery, Paul; Buch, Maya H.

Ann Rheum Dis ; 73(5): 909-12, 2014 May.

Artículo en Inglés | MEDLINE | ID: mdl-24385201

19.

A structure-based designed small molecule depletes hRpn13^Pru and a select group of KEN box proteins.

Lu, Xiuxiu; Chandravanshi, Monika; Sabbasani, Venkata R; Gaikwad, Snehal; Hughitt, V Keith; Gyabaah-Kessie, Nana; Scroggins, Bradley T; Das, Sudipto; Myint, Wazo; Clapp, Michelle E; Schwieters, Charles D; Dyba, Marzena A; Bolhuis, Derek L; Koscielniak, Janusz W; Andresson, Thorkell; Emanuele, Michael J; Brown, Nicholas G; Matsuo, Hiroshi; Chari, Raj; Citrin, Deborah E; Mock, Beverly A; Swenson, Rolf E; Walters, Kylie J.

Nat Commun ; 15(1): 2485, 2024 Mar 20.

Artículo en Inglés | MEDLINE | ID: mdl-38509117

20.

Differential DNA methylation patterns define status epilepticus and epileptic tolerance.

Miller-Delaney, Suzanne F C; Das, Sudipto; Sano, Takanori; Jimenez-Mateos, Eva M; Bryan, Kenneth; Buckley, Patrick G; Stallings, Raymond L; Henshall, David C.

J Neurosci ; 32(5): 1577-88, 2012 Feb 01.

Artículo en Inglés | MEDLINE | ID: mdl-22302800

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HLA class I signal peptide polymorphism determines the level of CD94/NKG2-HLA-E-mediated regulation of effector cell responses.

hRpn13 shapes the proteome and transcriptome through epigenetic factors HDAC8, PADI4, and transcription factor NF-κB p50.

SARS-CoV-2 papain-like protease plays multiple roles in regulating cellular proteins in the endoplasmic reticulum.

Fractional Quantum Hall States of the A Phase in the Second Landau Level.

The role of transcription factors in the acquisition of the four latest proposed hallmarks of cancer and corresponding enabling characteristics.

Anomalous Reentrant 5/2 Quantum Hall Phase at Moderate Landau-Level-Mixing Strength.

Fam60a defines a variant Sin3a-Hdac complex in embryonic stem cells required for self-renewal.

An Insight Into the Driver Mutations and Molecular Mechanisms Underlying Mucinous Adenocarcinoma of the Rectum.

Decreased Antibiotic Susceptibility Driven by Global Remodeling of the Klebsiella pneumoniae Proteome.

FKBPL-based peptide, ALM201, targets angiogenesis and cancer stem cells in ovarian cancer.

Das et al. Reply.

Functional characterization of a chr13q22.1 pancreatic cancer risk locus reveals long-range interaction and allele-specific effects on DIS3 expression.

Abatacept reduces disease activity and ultrasound power Doppler in ACPA-negative undifferentiated arthritis: a proof-of-concept clinical and imaging study.

Differential DNA methylation profiles of coding and non-coding genes define hippocampal sclerosis in human temporal lobe epilepsy.

Repeat cycles of rituximab on clinical relapse in ANCA-associated vasculitis: identifying B cell biomarkers for relapse to guide retreatment decisions.

Proteomic screening of human targets of viral microRNAs reveals functions associated with immune evasion and angiogenesis.

Peptide neurotransmitters activate a cation channel complex of NALCN and UNC-80.

Abatacept or tocilizumab after rituximab in rheumatoid arthritis? An exploratory study suggests non-response to rituximab is associated with persistently high IL-6 and better clinical response to IL-6 blocking therapy.

A structure-based designed small molecule depletes hRpn13^Pru and a select group of KEN box proteins.

Differential DNA methylation patterns define status epilepticus and epileptic tolerance.