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1.
Soft Matter ; 19(23): 4254-4264, 2023 Jun 14.
Artículo en Inglés | MEDLINE | ID: mdl-37249466

RESUMEN

Nature employs protein aggregates when strong materials are needed to adhere surfaces in extreme environments, allowing organisms to survive conditions ranging from harsh intertidal coasts to open oceans. Amyloids and amyloid-like materials are prevalent and amongst the most densely bonded aggregate structures, though how they contribute to wet adhesion is not well understood. In this work, waterborne protein solutions of individual whey proteins are cured in place using varied temperature to produce model adhesives enriched in amyloid or non-amyloid aggregates. Dry adhesive strengths range from 0.2-1.5 MPa, while wet adhesive strengths range from 0-0.5 MPa across the tested proteins and processing conditions, highlighting that both proper protein selection and controlled aggregation extent are necessary for successful underwater performance. For bovine serum albumin, the amyloid-enriched adhesive was able to retain ca. 500 kPa bond strength underwater throughout extended immersion and thermal degradation testing, while the non-amyloid adhesive weakened by up to 80%. As freestanding gels, higher temperature processing improved underwater stability for all the protein materials, with amyloid-rich structures remaining mostly water-insoluble after 30 days submerged in water. Protein-based adhesives with a controlled aggregate structure shed light on the ability of amyloid-containing materials to remain adhered underwater, a necessary trait for the survival of many organisms.


Asunto(s)
Adhesivos , Thoracica , Animales , Adhesivos/química , Agregado de Proteínas , Amiloide , Agua/química
2.
Biomacromolecules ; 22(2): 365-373, 2021 02 08.
Artículo en Inglés | MEDLINE | ID: mdl-33135878

RESUMEN

Barnacles integrate multiple protein components into distinct amyloid-like nanofibers arranged as a bulk material network for their permanent underwater attachment. The design principle for how chemistry is displayed using adhesive nanomaterials, and fragments of proteins that are responsible for their formation, remains a challenge to assess and is yet to be established. Here, we use engineered bacterial biofilms to display a library of amyloid materials outside of the cell using full-length and subdomain sequences from a major component of the barnacle adhesive. A staggered charged pattern is found throughout the full-length sequence of a 43 kDa cement protein (AACP43), establishing a conserved sequence design evolved by barnacles to make adhesive nanomaterials. AACP43 domain deletions vary in their propensity to aggregate and form fibers, as exported extracellular materials are characterized through staining, immunoblotting, scanning electron microscopy, and atomic force microscopy. Full-length AACP43 and its domains have a propensity to aggregate into nanofibers independent of all other barnacle glue components, shedding light on its function in the barnacle adhesive. Curliated Escherichia coli biofilms are a compatible system for heterologous expression and the study of foreign functional amyloid adhesive materials, used here to identify the c-terminal portion of AACP43 as critical in material formation. This approach allows us to establish a common sequence pattern between two otherwise dissimilar families of cement proteins, laying the foundation to elucidate adhesive chemistries by one of the most tenacious marine fouling organisms in the ocean.


Asunto(s)
Nanoestructuras , Thoracica , Adhesivos , Animales , Biopelículas , Escherichia coli/genética , Thoracica/genética
3.
Langmuir ; 32(2): 541-50, 2016 Jan 19.
Artículo en Inglés | MEDLINE | ID: mdl-26681301

RESUMEN

Surface plasmon resonance imaging (SPRI) and voltammetry were used simultaneously to monitor Amphibalanus (=Balanus) amphitrite barnacles reattached and grown on gold-coated glass slides in artificial seawater. Upon reattachment, SPRI revealed rapid surface adsorption of material with a higher refractive index than seawater at the barnacle/gold interface. Over longer time periods, SPRI also revealed secretory activity around the perimeter of the barnacle along the seawater/gold interface extending many millimeters beyond the barnacle and varying in shape and region with time. Ex situ experiments using attenuated total reflectance infrared (ATR-IR) spectroscopy confirmed that reattachment of barnacles was accompanied by adsorption of protein to surfaces on similar time scales as those in the SPRI experiments. Barnacles were grown through multiple molting cycles. While the initial reattachment region remained largely unchanged, SPRI revealed the formation of sets of paired concentric rings having alternately darker/lighter appearance (corresponding to lower and higher refractive indices, respectively) at the barnacle/gold interface beneath the region of new growth. Ex situ experiments coupling the SPRI imaging with optical and FTIR microscopy revealed that the paired rings coincide with molt cycles, with the brighter rings associated with regions enriched in amide moieties. The brighter rings were located just beyond orifices of cement ducts, consistent with delivery of amide-rich chemistry from the ducts. The darker rings were associated with newly expanded cuticle. In situ voltammetry using the SPRI gold substrate as the working electrode revealed presence of redox active compounds (oxidation potential approx 0.2 V vs Ag/AgCl) after barnacles were reattached on surfaces. Redox activity persisted during the reattachment period. The results reveal surface adsorption processes coupled to the complex secretory and chemical activity under barnacles as they construct their adhesive interfaces.


Asunto(s)
Adhesivos/química , Amidas/química , Proteínas/química , Thoracica/química , Adhesividad , Animales , Vidrio/química , Oro/química , Muda/fisiología , Imagen Óptica , Oxidación-Reducción , Proteínas/metabolismo , Refractometría , Agua de Mar , Thoracica/fisiología
4.
BMC Genomics ; 16: 859, 2015 Oct 24.
Artículo en Inglés | MEDLINE | ID: mdl-26496984

RESUMEN

BACKGROUND: A complete understanding of barnacle adhesion remains elusive as the process occurs within and beneath the confines of a rigid calcified shell. Barnacle cement is mainly proteinaceous and several individual proteins have been identified in the hardened cement at the barnacle-substrate interface. Little is known about the molt- and tissue-specific expression of cement protein genes but could offer valuable insight into the complex multi-step processes of barnacle growth and adhesion. METHODS: The main body and sub-mantle tissue of the barnacle Amphibalanus amphitrite (basionym Balanus amphitrite) were collected in pre- and post-molt stages. RNA-seq technology was used to analyze the transcriptome for differential gene expression at these two stages and liquid chromatography-mass spectrometry/mass spectrometry (LC-MS/MS) was used to analyze the protein content of barnacle secretions. RESULTS: We report on the transcriptomic analysis of barnacle cement gland tissue in pre- and post-molt growth stages and proteomic investigation of barnacle secretions. While no significant difference was found in the expression of cement proteins genes at pre- and post-molting stages, expression levels were highly elevated in the sub-mantle tissue (where the cement glands are located) compared to the main barnacle body. We report the discovery of a novel 114kD cement protein, which is identified in material secreted onto various surfaces by adult barnacles and with the encoding gene highly expressed in the sub-mantle tissue. Further differential gene expression analysis of the sub-mantle tissue samples reveals a limited number of genes highly expressed in pre-molt samples with a range of functions including cuticular development, biominerialization, and proteolytic activity. CONCLUSIONS: The expression of cement protein genes appears to remain constant through the molt cycle and is largely confined to the sub-mantle tissue. Our results reveal a novel and potentially prominent protein to the mix of cement-related components in A. amphitrite. Despite the lack of a complete genome, sample collection allowed for extended transcriptomic analysis of pre- and post-molt barnacle samples and identified a number of highly-expressed genes. Our results highlight the complexities of this sessile marine organism as it grows via molt cycles and increases the area over which it exhibits robust adhesion to its substrate.


Asunto(s)
Perfilación de la Expresión Génica , Muda/genética , Proteínas/genética , Proteínas/metabolismo , Thoracica/genética , Thoracica/metabolismo , Transcriptoma , Animales , Biología Computacional/métodos , Expresión Génica , Regulación de la Expresión Génica , Secuenciación de Nucleótidos de Alto Rendimiento , Anotación de Secuencia Molecular
5.
Langmuir ; 31(16): 4654-62, 2015 Apr 28.
Artículo en Inglés | MEDLINE | ID: mdl-25867796

RESUMEN

Glucosyltransferases (Gtfs) from S. mutans play critical roles in the development of virulent oral biofilms associated with dental caries disease. Gtfs adsorbed to the tooth surface produce glucans that promote local microbial colonization and provide an insoluble exopolysaccharides (EPS) matrix that facilitates biofilm initiation. Moreover, agents that inhibit the enzymatic activity of Gtfs in solution often have reduced or no effects on surface-adsorbed Gtfs. This study elucidated the mechanisms responsible for the differences in functionality that GtfB exhibits in solution vs surface-adsorbed. Upon adsorption to planar fused-quartz substrates, GtfB displayed a 37% loss of helices and 36% increase of ß-sheets, as determined by circular dichroism (CD) spectroscopy, and surface-induced conformational changes were more severe on substrates modified with CH3- and NH2-terminated self-assembled monolayers. GtfB also underwent substantial conformation changes when adsorbing to hydroxyapatite (HA) microspheres, likely due to electrostatic interactions between negatively charged GtfB and positively charged HA crystal faces. Conformational changes were lessened when HA surfaces were coated with saliva (sHA) prior to GtfB adsorption. Furthermore, GtfB remained highly active on sHA, as determined by in situ attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy, producing glucans that were structurally different than GtfB in solution and known to increase the accumulation and virulence of biofilms. Our data provide the first insight into the structural underpinnings governing Gtf conformation and enzymatic function that occur on tooth surfaces in vivo, which may lead to designing potent new inhibitors and improved strategies to combat the formation of pathogenic oral biofilms.


Asunto(s)
Durapatita/química , Glucanos/biosíntesis , Glucosiltransferasas/química , Glucosiltransferasas/metabolismo , Saliva/química , Adsorción , Durapatita/metabolismo , Glucanos/química , Conformación Molecular , Tamaño de la Partícula , Saliva/metabolismo , Streptococcus mutans/enzimología , Streptococcus mutans/metabolismo , Propiedades de Superficie
6.
Anal Chem ; 86(17): 8526-9, 2014 Sep 02.
Artículo en Inglés | MEDLINE | ID: mdl-25110989

RESUMEN

Dissociation constants of GG-X-GG and X5 peptides (X = G, D, H, or K), and bovine albumin (BSA) and fibronectin (FN) were measured by X-ray photoelectron spectroscopy (XPS) in ultrahigh vacuum at room temperature. The biomolecules were deposited on Au substrates by drying 2.0 µL drops of 1.0 µg µL(-1) stock solutions in 100 mM sodium phosphate buffers (pH 1-12) at room temperature. Because of the ∼+1.3 eV shift in binding energy (BE) of protonated amines, pK values of basic amino acids were calculated by plotting the fraction of protonated amines as a function of solution pH. Similarly, the BE of carboxyl groups shifted ∼-1.3 eV upon deprotonation. While C 1s spectra were convoluted by the multiple chemical states of carbon present in the samples, the ratio of the C 1s components centered at BE = 289.0 ± 0.4 and BE = 287.9 ± 0.3 proved to reliably assess deprotonation of carboxyl groups. The pK values for the Asp (3.1 and 2.4), His (6.7), and Lys (11.3 and 10.6) peptides, and the pI of BSA (4.8) and FN (5.7), were consistent with published values; thus, these methods could potentially be used to determine the dissociation constants of surface-bound biomolecules.


Asunto(s)
Bioquímica/instrumentación , Bioquímica/métodos , Fibronectinas/análisis , Espectroscopía de Fotoelectrones , Albúmina Sérica Bovina/análisis , Animales , Bovinos , Punto Isoeléctrico , Cinética
7.
J Pept Sci ; 20(5): 366-74, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24648029

RESUMEN

We show that three designed cyclic d,l-peptides are ß-helical in TFE-a solvent in which the archetypal ß-helical peptide, gA, is unstructured. This result represents an advance in the field of ß-helical peptide foldamers and a step toward achieving ß-helical structure under a broad range of solvent conditions. We synthesized two of the three peptides examined using an improved variant of our original CBC strategy. Here, we began with a commercially available PEG-PS composite resin prefunctionalized with the alkanesulfonamide 'SCL' linker and preloaded with glycine. Our new conditions avoided C-terminal epimerization during the CBC step and simplified purification. In addition, we present results to define the scope and limitations of our CBC strategy. These methods and observations will prove useful in designing additional cyclic ß-helical peptides for applications ranging from transmembrane ion channels to ligands for macromolecular targets. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.


Asunto(s)
Péptidos Cíclicos/química , Péptidos Cíclicos/síntesis química , Trifluoroetanol/química , Ciclización , Modelos Moleculares , Estructura Secundaria de Proteína
8.
Biofouling ; 30(7): 799-812, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-25115515

RESUMEN

The radial growth and advancement of the adhesive interface to the substratum of many species of acorn barnacles occurs underwater and beneath an opaque, calcified shell. Here, the time-dependent growth processes involving various autofluorescent materials within the interface of live barnacles are imaged for the first time using 3D time-lapse confocal microscopy. Key features of the interface development in the striped barnacle, Amphibalanus (= Balanus) amphitrite were resolved in situ and include advancement of the barnacle/substratum interface, epicuticle membrane development, protein secretion, and calcification. Microscopic and spectroscopic techniques provide ex situ material identification of regions imaged by confocal microscopy. In situ and ex situ analysis of the interface support the hypothesis that barnacle interface development is a complex process coupling sequential, timed secretory events and morphological changes. This results in a multi-layered interface that concomitantly fulfills the roles of strongly adhering to a substratum while permitting continuous molting and radial growth at the periphery.


Asunto(s)
Thoracica/crecimiento & desarrollo , Animales , Células Epidérmicas , Epidermis/crecimiento & desarrollo , Thoracica/citología
9.
Biofilm ; 7: 100186, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38495771

RESUMEN

Marine biofouling causes serious environmental problems and has adverse impacts on the maritime industry. Biofouling on windows and optical equipment reduces surface transparency, limiting their application for on-site monitoring or continuous measurement. This work illustrates that UV emitting glasses (UEGs) can prevent the establishment and growth of biofilm on the illuminated surfaces. Specifically, this paper describes how UEGs are enabled by innovatively modifying the surfaces of the glass with light scattering particles. Modification of glass surface with silica nanoparticles at a concentration 26.5 µg/cm2 resulted in over ten-fold increase in UV irradiance, while maintaining satisfactory visible and IR transparency metrics of over 99 %. The UEG reduced visible biological growth by 98 % and resulted in a decrease of 1.79 log in detected colony forming units when compared to the control during a 20 day submersion at Port Canaveral, Florida, United States. These findings serve as strong evidence that UV emitting glass should be explored as a promising approach for biofilm inhibition on transparent surfaces.

10.
J Am Chem Soc ; 135(40): 15040-52, 2013 Oct 09.
Artículo en Inglés | MEDLINE | ID: mdl-24079407

RESUMEN

The adsorption to gold surfaces in aqueous solutions has been systematically evaluated for a series of model oligopeptides. The series includes GG-X-GG "host-guest" sequences, where the central X residue is one of 19 proteinogenic amino acids, and water-soluble X5 and X10 homo-oligopeptides. Irreversible adsorption on gold of GG-X-GG peptides, which lack significant secondary structure, was quantitatively analyzed by X-ray photoelectron spectroscopy (XPS). The broad range of the quasi-equilibrium surface densities measured by XPS corroborates the hypothesis that surface interactions of GG-X-GG peptides are dominated by their central X residues. The highest surface density was produced by GGCGG, followed by sequences with hydrophobic, charged, and polar central residues. Neither electrostatic nor hydrophobic interactions dominate the adsorption of GG-X-GG peptides: for charged and polar central residues, surface densities correlate with the size of the side chains but not with the sign of the charges, while for hydrophobic residues, the surface densities are uncorrelated with side-chain hydrophobicity. An intriguing result is the disparity in surface adsorption of structural isomers of Leu and Val, which exhibit a correlation between the position of the branched carbon in the side chain and the interaction of the peptide backbone with the surface. The surface density produced by the adsorption of GG-X-GG peptides overall was low; however, adsorption tended to increase as the number of X residues increased (GG-X-GG < X5 < X10), suggesting that cooperative binding is important for surface attachment of proteins that readily adsorb on inorganic surfaces. The Leu and Val isomer investigation and trends revealed by our analysis show how the methodology and results described here provide a fundamental reference for future experimental and computational studies and for rational design of peptides that exhibit predictable adsorption behaviors on a given surface.


Asunto(s)
Oro/química , Oligopéptidos/química , Adsorción , Interacciones Hidrofóbicas e Hidrofílicas , Estructura Secundaria de Proteína , Solventes/química , Propiedades de Superficie
11.
Langmuir ; 29(32): 10095-101, 2013 Aug 13.
Artículo en Inglés | MEDLINE | ID: mdl-23845110

RESUMEN

Conformational changes of three cyclic ß-helical peptides upon adsorption onto planar fused-quartz substrates were detected and analyzed by far-ultraviolet (UV) circular dichroism (CD) spectroscopy. In trifluoroethanol (TFE), hydrophobic peptides, Leu ß and Val ß, form left- and right-handed helices, respectively, and water-soluble peptide WS ß forms a left-handed helix. Upon adsorption, CD spectra showed a mixture of folded and unfolded conformations for Leu ß and Val ß and predominantly unfolded conformations for WS ß. X-ray photoelectron spectroscopy (XPS) provided insight about the molecular mechanisms governing the conformational changes, revealing that ca. 40% of backbone amides in Leu ß and Val ß were interacting with the hydrophilic substrate, while only ca. 15% of the amines/amides in WS ß showed similar interactions. In their folded ß-helical conformations, Leu ß and Val ß present only hydrophobic groups to their surroundings; hydrophilic surface groups can only interact with backbone amides if the peptides change their conformation. Conversely, as a ß helix, WS ß presents hydrophilic side chains to its surroundings that could, in principle, interact with hydrophilic surface groups, with the peptide retaining its folded structure. Instead, the observed unfolded surface conformation for WS ß and the relatively small percentage of surface-bound amides (15 versus 40% for Leu ß and Val ß) suggest that hydrophilic surface groups induce unfolding. Upon this surface-induced unfolding, WS ß interacts with the surface preferentially via hydrophilic side chains rather than backbone amides. In contrast, the unfolded ß-hairpin-like form of WS ß does not irreversibly adsorb on fused quartz from water, highlighting that solvation effects can be more important than initial conformation in governing peptide adsorption. Both label-free methods demonstrated in this work are, in general, applicable to structural analysis of a broad range of biomolecules adsorbed on transparent planar substrates, the surface properties of which could be customized.


Asunto(s)
Péptidos Cíclicos/química , Cuarzo/química , Adsorción , Dicroismo Circular , Modelos Moleculares , Conformación Proteica , Propiedades de Superficie
12.
ACS Biomater Sci Eng ; 9(1): 246-256, 2023 01 09.
Artículo en Inglés | MEDLINE | ID: mdl-36542483

RESUMEN

Biomaterials are an important source of inspiration for the development of strong and tough materials. Many improved and optimized synthetic materials have been recently developed utilizing this bioinspiration concept. Using side-chain-to-side-chain polymerization of cyclic ß-peptide rings, a novel class of nanomaterials was recently introduced with outstanding mechanical properties such as toughness values greater than natural silks. In this work, molecular dynamics is used to understand the mechanics of side-chain-to-side-chain polymerization of cyclic ß-peptide rings. Unbiased steered molecular dynamics simulations are used to show the difference in the strength of polymerized and unpolymerized processing of similar cyclic rings. The simulations are performed both in aqueous and vacuum environments to capture the role of water on the mechanical properties of the cyclic peptides. Our results show that unpolymerized peptides behave like brittle material, whereas polymerized ones can withstand some stress after initial failure with large values of strain-to-failure. Finally, we have shown that the strength of cyclic peptides in water is higher than in a vacuum.


Asunto(s)
Péptidos Cíclicos , Polímeros , Polímeros/química , Agua/química , Péptidos/química , Materiales Biocompatibles
13.
Biointerphases ; 18(3)2023 05 01.
Artículo en Inglés | MEDLINE | ID: mdl-37289032

RESUMEN

Microbial growth on surfaces poses health concerns and can accelerate the biodegradation of engineered materials and coatings. Cyclic peptides are promising agents to combat biofouling because they are more resistant to enzymatic degradation than their linear counterparts. They can also be designed to interact with extracellular targets and intracellular targets and/or self-assemble into transmembrane pores. Here, we determine the antimicrobial efficacy of two pore-forming cyclic peptides, α-K3W3 and ß-K3W3, against bacterial and fungal liquid cultures and their capacity to inhibit biofilm formation on coated surfaces. These peptides display identical sequences, but the additional methylene group in the peptide backbone of ß-amino acids results in a larger diameter and an enhancement in the dipole moment. In liquid cultures, ß-K3W3 exhibited lower minimum inhibitory concentration values and greater microbicidal power in reducing the number of colony forming units (CFUs) when exposed to a gram-positive bacterium, Staphylococcus aureus, and two fungal strains, Naganishia albida and Papiliotrema laurentii. To evaluate the efficacy against the formation of fungal biofilms on painted surfaces, cyclic peptides were incorporated into polyester-based thermoplastic polyurethane. The formation of N. albida and P. laurentii microcolonies (105 per inoculation) for cells extracted from coatings containing either peptide could not be detected after a 7-day exposure. Moreover, very few CFUs (∼5) formed after 35 days of repeated depositions of freshly cultured P. laurentii every 7 days. In contrast, the number of CFUs for cells extracted from the coating without cyclic peptides was >8 log CFU.


Asunto(s)
Antiinfecciosos , Poliuretanos , Poliuretanos/farmacología , Materiales Biocompatibles Revestidos/farmacología , Materiales Biocompatibles Revestidos/química , Antiinfecciosos/farmacología , Biopelículas , Péptidos , Péptidos Cíclicos , Antibacterianos/farmacología , Pruebas de Sensibilidad Microbiana
14.
J Mater Chem B ; 10(45): 9400-9412, 2022 11 23.
Artículo en Inglés | MEDLINE | ID: mdl-36285764

RESUMEN

Enzyme function relies on the placement of chemistry defined by solvent and self-associative hydrogen bonding displayed by the protein backbone. Amyloids, long-range multi-peptide and -protein materials, can mimic enzyme functions while having a high proportion of stable self-associative backbone hydrogen bonds. Though catalytic amyloid structures have exhibited a degree of temperature and solvent stability, defining their full extremophilic properties and the molecular basis for such extreme activity has yet to be realized. Here we demonstrate that, like thermophilic enzymes, catalytic amyloid activity persists across high temperatures with an optimum activity at 81 °C where they are 30-fold more active than at room temperature. Unlike thermophilic enzymes, catalytic amyloids retain both activity and structure well above 100 °C as well as in the presence of co-solvents. Changes in backbone vibrational states are resolved in situ using non-linear 2D infrared spectroscopy (2DIR) to reveal that activity is sustained by reorganized backbone hydrogen bonds in extreme environments, evidenced by an emergent vibrational mode centered at 1612 cm-1. Restructuring also occurs in organic solvents, and facilitates complete retention of hydrolysis activity in co-solvents of lesser polarity. We support these findings with molecular modeling, where the displacement of water by co-solvents leads to shorter, less competitive, bonding lifetimes that further stabilize self-associative backbone interactions. Our work defines amyloid properties that counter classical proteins, where extreme environments induce mechanisms of restructuring to support enzyme-like functions necessary for synthetic applications.


Asunto(s)
Extremófilos , Amiloide/química , Enlace de Hidrógeno , Solventes/química , Modelos Moleculares
15.
Langmuir ; 25(24): 13926-33, 2009 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-19499935

RESUMEN

Systems using immobilized enzymes are attractive for a wide range of industrial and medical applications because they allow for the fabrication of stable, reusable substrates with highly specific functionality. The performance of these systems is greatly dependent upon the orientation and conformation of the adsorbed enzymes. To investigate these relationships, we have developed and applied methods to quantitatively assess the secondary structure of adsorbed enzyme layers on planar surfaces using circular dichroism (CD) spectroscopy and evaluate their bioactivity using colorimetric assays. These combined measurements provide molecular-level insights regarding whether observed changes in adsorbed enzyme bioactivity are due to the adsorbed orientation of an enzyme or adsorption-induced changes in its conformation. Using this approach, we investigated the adsorption behavior of lysozyme (HEWL), xylanase (XYL), and glucose oxidase (GOx) on OH-, CH(3)-, NH(2)-, and COOH-terminated alkanethiol self-assembled monolayer (SAM) surfaces. The bioactivities of small enzymes HEWL and XYL had pronounced variations between the different SAM surfaces despite their structural stability, highlighting the role of adsorbed orientation on bioactivity. In contrast, GOx, which is a much larger enzyme, exhibited wide variations in both its structure and bioactivity after adsorption, with adsorption-induced conformational changes actually enhancing its bioactivity. These results provide new insights into protein-surface interactions at the molecular level and demonstrate that adsorption can either promote or inhibit bioactivity depending on how the surface chemistry influences the orientation and conformational state of the enzyme on the surface.


Asunto(s)
Enzimas Inmovilizadas/química , Adsorción , Dicroismo Circular , Colorimetría , Enzimas Inmovilizadas/metabolismo , Glucosa Oxidasa/química , Glucosa Oxidasa/metabolismo , Cinética , Muramidasa/química , Muramidasa/metabolismo , Conformación Proteica , Estructura Secundaria de Proteína , Propiedades de Superficie , Xilosidasas/química , Xilosidasas/metabolismo
16.
Biomacromolecules ; 10(4): 748-55, 2009 Apr 13.
Artículo en Inglés | MEDLINE | ID: mdl-19271753

RESUMEN

Attaining control over the surface chemistry of titanium is critical to its use in medical implants, especially to address complications such as infection and loosening of implants over time, which still present significant challenges. The surface-initiated atom transfer radical polymerization (SI-ATRP) of a saccharide-substituted methacrylate, 2-gluconamidoethyl methacrylate (GAMA), affords dense polymer brushes that resist protein adsorption and cell adhesion. We further tailored the nature of the surfaces by covalent attachment of an adhesion peptide to afford control over cell adhesion. Whereas unmodified poly(GAMA) brushes prevent cell adhesion, brushes with a tethered GFOGER-containing peptide sequence promote the deposition of confluent well-spread cells. The presentation of adhesion proteins on a robust bioresistive background in this fashion constitutes a versatile approach to the development of new biomaterials.


Asunto(s)
Adhesión Celular/fisiología , Metacrilatos/química , Osteoblastos/metabolismo , Polímeros/química , Titanio/metabolismo , Animales , Células Cultivadas , Ensayo de Inmunoadsorción Enzimática , Ratones , Osteoblastos/citología , Fragmentos de Péptidos/química , Fragmentos de Péptidos/metabolismo , Espectroscopía Infrarroja por Transformada de Fourier , Resonancia por Plasmón de Superficie , Propiedades de Superficie , Titanio/química
17.
Integr Biol (Camb) ; 11(5): 235-247, 2019 05 01.
Artículo en Inglés | MEDLINE | ID: mdl-31251329

RESUMEN

Successful proteomic characterization of biological material depends on the development of robust sample processing methods. The acorn barnacle Amphibalanus amphitrite is a biofouling model for adhesive processes, but the identification of causative proteins involved has been hindered by their insoluble nature. Although effective, existing sample processing methods are labor and time intensive, slowing progress in this field. Here, a more efficient sample processing method is described which exploits pressure cycling technology (PCT) in combination with protein solvents. PCT aids in protein extraction and digestion for proteomics analysis. Barnacle adhesive proteins can be extracted and digested in the same tube using PCT, minimizing sample loss, increasing throughput to 16 concurrently processed samples, and decreasing sample processing time to under 8 hours. PCT methods produced similar proteomes in comparison to previous methods. Two solvents which were ineffective at extracting proteins from the adhesive at ambient pressure (urea and methanol) produced more protein identifications under pressure than highly polar hexafluoroisopropanol, leading to the identification and description of >40 novel proteins at the interface. Some of these have homology to proteins with elastomeric properties or domains involved with protein-protein interactions, while many have no sequence similarity to proteins in publicly available databases, highlighting the unique adherent processes evolved by barnacles. The methods described here can not only be used to further characterize barnacle adhesive to combat fouling, but may also be applied to other recalcitrant biological samples, including aggregative or fibrillar protein matrices produced during disease, where a lack of efficient sample processing methods has impeded advancement. Data are available via ProteomeXchange with identifier PXD012730.


Asunto(s)
Adhesivos , Ensayo de Materiales/instrumentación , Proteómica/instrumentación , Proteómica/métodos , Thoracica/fisiología , Animales , Incrustaciones Biológicas , Carbohidratos/química , Biología Computacional , Estrés Oxidativo , Oxígeno/química , Péptidos/química , Presión , Unión Proteica , Mapeo de Interacción de Proteínas , Proteoma , Solventes
18.
ACS Nano ; 13(5): 5172-5183, 2019 05 28.
Artículo en Inglés | MEDLINE | ID: mdl-30986028

RESUMEN

The permanent adhesive produced by adult barnacles is held together by tightly folded proteins that form amyloid-like materials distinct among marine foulants. In this work, we link stretches of alternating charged and noncharged linear sequences from a family of adhesive proteins to their role in forming fibrillar nanomaterials. Using recombinant proteins and short barnacle cement derived peptides (BCPs), we find a central sequence with charged motifs of the pattern [Gly/Ser/Val/Thr/Ala-X], where X are charged amino acids, to exert specific control over timing, structure, and morphology of fibril formation. While most BCPs remain dormant, the core segment demonstrates rapid polymerization as well as an ability to template other peptides with no propensity for self-assembly. Patterned charge domains assemble dormant peptides through a specific antiparallel ß-sheet structure as measured by FTIR. While charged domains favor an antiparallel structure, BCPs without charged domains switch fibril assembly to favor simpler parallel ß-sheet aggregates. In addition to activation, charged domains direct nanofibers to grow into discrete microns long fibrils similar to the natural adhesive, while segments without such domains only form short branched aggregates. The assembly of adhesive sequences through recognition of structured templates outlines a strategy used by barnacles to control physical mechanisms of underwater adhesive delivery, activation, and curing based on molecular recognition between proteins.


Asunto(s)
Adhesivos/química , Conformación Molecular , Polimerizacion , Thoracica/química , Secuencia de Aminoácidos , Animales , Nanoestructuras/química , Péptidos/química , Espectroscopía Infrarroja por Transformada de Fourier
19.
Philos Trans R Soc Lond B Biol Sci ; 374(1784): 20190203, 2019 10 28.
Artículo en Inglés | MEDLINE | ID: mdl-31495306

RESUMEN

Concerns about the bioaccumulation of toxic antifouling compounds have necessitated the search for alternative strategies to combat marine biofouling. Because many biologically essential minerals have deleterious effects on organisms at high concentration, one approach to preventing the settlement of marine foulers is increasing the local concentration of ions that are naturally present in seawater. Here, we used surface-active borate glasses as a platform to directly deliver ions (Na+, Mg2+ and BO43-) to the adhesive interface under acorn barnacles (Amphibalanus (=Balanus) amphitrite). Additionally, surface-active glasses formed reaction layers at the glass-water interface, presenting another challenge to fouling organisms. Proteomics analysis showed that cement deposited on the gelatinous reaction layers is more soluble than cement deposited on insoluble glasses, indicating the reaction layer and/or released ions disrupted adhesion processes. Laboratory experiments showed that the majority (greater than 79%) of adult barnacles re-attached to silica-free borate glasses for 14 days could be released and, more importantly, barnacle larvae did not settle on the glasses. The formation of microbial biofilms in field tests diminished the performance of the materials. While periodic water jetting (120 psi) did not prevent the formation of biofilms, weekly cleaning did dramatically reduce macrofouling on magnesium aluminoborate glass to levels below a commercial foul-release coating. This article is part of the theme issue 'Transdisciplinary approaches to the study of adhesion and adhesives in biological systems'.


Asunto(s)
Boratos/química , Magnesio/química , Sodio/química , Thoracica/fisiología , Animales , Propiedades de Superficie
20.
Adv Sci (Weinh) ; 5(6): 1700762, 2018 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-29938165

RESUMEN

Marine macrofoulers (e.g., barnacles, tubeworms, mussels) create underwater adhesives capable of attaching themselves to almost any material. The difficulty in removing these organisms frustrates maritime and oceanographic communities, and fascinates biomedical and industrial communities seeking synthetic adhesives that cure and hold steadfast in aqueous environments. Protein analysis can reveal the chemical composition of natural adhesives; however, developing synthetic analogs that mimic their performance remains a challenge due to an incomplete understanding of adhesion processes. Here, it is shown that acorn barnacles (Amphibalanus (=Balanus) amphitrite) secrete a phase-separating fluid ahead of growth and cement deposition. This mixture consists of a phenolic laden gelatinous phase that presents a phase rich in lipids and reactive oxygen species at the seawater interface. Nearby biofilms rapidly oxidize and lift off the surface as the secretion advances. While phenolic chemistries are ubiquitous to arthropod adhesives and cuticles, the findings demonstrate that A. amphitrite uses these chemistries in a complex surface-cleaning fluid, at a substantially higher relative abundance than in its adhesive. The discovery of this critical step in underwater adhesion represents a missing link between natural and synthetic adhesives, and provides new directions for the development of environmentally friendly biofouling solutions.

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