The EPILEPSIAE database: an extensive electroencephalography database of epilepsy patients.

From the very beginning the seizure prediction community faced problems concerning evaluation, standardization, and reproducibility of its studies. One of the main reasons for these shortcomings was the lack of access to high-quality long-term electroencephalography (EEG) data. In this article we present the EPILEPSIAE database, which was made publicly available in 2012. We illustrate its content and scope. The EPILEPSIAE database provides long-term EEG recordings of 275 patients as well as extensive metadata and standardized annotation of the data sets. It will adhere to the current standards in the field of prediction and facilitate reproducibility and comparison of those studies. Beyond seizure prediction, it may also be of considerable benefit for studies focusing on seizure detection, basic neurophysiology, and other fields.

Germany weighs whether culling excess lab animals is a crime.

As prosecutors evaluate complaints from animal rights groups, labs try to reduce surplus.

The role of high-quality EEG databases in the improvement and assessment of seizure prediction methods.

Initially, seizure prediction was based on the analysis of brief EEG segments preceding clinically manifest seizures. Whereas such approaches suggested that the sensitivities of various EEG-derived features in predicting seizures were high, the inclusion of longer interictal periods and the combined assessment of sensitivity and specificity and the application of statistical validation methods have put into question the validity of such claims. We here show that the duration of EEG on which analyses are based and the number of seizures assessed negatively correlate with the reported sensitivities of prediction studies. Methodological aspects of seizure prediction are discussed in the framework of currently existing databases and of the newly established European Union database. This article is part of a Supplemental Special Issue entitled The Future of Automated Seizure Detection and Prediction.

Anticipating the unobserved: prediction of subclinical seizures.

Subclinical seizures (SCS) have rarely been considered in the diagnosis and therapy of epilepsy and have not been systematically analyzed in studies on seizure prediction. Here, we investigate whether predictions of subclinical seizures are feasible and how their occurrence may affect the performance of prediction algorithms. Using the European database of long-term recordings of surface and invasive electroencephalography data, we analyzed the data from 21 patients with SCS, including in total 413 clinically manifest seizures (CS) and 3341 SCS. Based on the mean phase coherence we investigated the predictive performance of CS and SCS. The two types of seizures had similar prediction sensitivities. Significant performance was found considerably more often for SCS than for CS, especially for patients with invasive recordings. When analyzing false alarms triggered by predicting CS, a significant number of these false predictions were followed by SCS for 9 of 21 patients. Although currently observed prediction performance may not be deemed sufficient for clinical applications for the majority of the patients, it can be concluded that the prediction of SCS is feasible on a similar level as for CS and allows a prediction of more of the seizures impairing patients, possibly also reducing the number of false alarms that were in fact correct predictions of CS. This article is part of a Supplemental Special Issue entitled The Future of Automated Seizure Detection and Prediction.

Joining the benefits: combining epileptic seizure prediction methods.

PURPOSE: In recent years, a variety of methods developed in the field of linear and nonlinear time series analysis have been used to obtain reliable predictions of epileptic seizures. Because individual methods for seizure prediction so far have shown statistical significance but insufficient performance for clinical applications, we investigated possible improvements by combining algorithms capturing different aspects of electroencephalogram (EEG) dynamics. METHODS: We applied the mean phase coherence and the dynamic similarity index to long-term continuous intracranial EEG data. The predictive performance of both methods was assessed and statistically evaluated separately, as well as by using logical "AND" and "OR" combinations. RESULTS: Used independently, either method resulted in a statistically significant prediction performance in only a few patients. Particularly the "AND" combination led to improved prediction performances, leading to an increase in sensitivity and/or specificity. For a maximum false prediction rate of 0.15/h, the mean sensitivity improved from about 25% for the individual methods to 43.2% for the "AND" and to 35.2% for the "OR" combination. DISCUSSION: This study shows that combinations of prediction methods are promising new approaches to enhance seizure prediction performance considerably. It allows merging the individual benefits of prediction methods in a complementary manner. Because either sensitivity or specificity of seizure prediction methods can be improved depending on the needs of the desired clinical application, the combination opens a new window for future use in a clinical setting.

A common strategy and database to compare the performance of seizure prediction algorithms.

A reliable algorithm for the timely prediction of epileptic seizures would be a milestone in epilepsy research. Prediction performances have so far been determined using retrospective data assessment, leaving open the question as to whether they prove statistically significant and clinically useful under prospective conditions. To this aim, a Seizure Prediction Competition has been set up. Here, the background and the details of this competition are described.

Fluctuations in the open time of synaptic channels: an application to noise analysis based on charge.

Synaptic channels are stochastic devices. Even recording from large ensembles of channels, the fluctuations, described by Markov transition matrices, can be used to extract single channel properties. Here we study fluctuations in the open time of channels, which is proportional to the charge flowing through the channel. We use the results to implement a novel type of noise analysis that uses the charge rather than the current to extract fundamental channel parameters. We show in simulations that this charge based noise analysis is more robust if the synapse is located on the dendrites and thus subject to cable filtering. However, we also demonstrate that when multiple synapses are distributed on the dendrites, noise analysis breaks down. We finally discuss applications of our results to other biological processes.

EPILEPSIAE - a European epilepsy database.

With a worldwide prevalence of about 1%, epilepsy is one of the most common serious brain diseases with profound physical, psychological and, social consequences. Characteristic symptoms are seizures caused by abnormally synchronized neuronal activity that can lead to temporary impairments of motor functions, perception, speech, memory or, consciousness. The possibility to predict the occurrence of epileptic seizures by monitoring the electroencephalographic activity (EEG) is considered one of the most promising options to establish new therapeutic strategies for the considerable fraction of patients with currently insufficiently controlled seizures. Here, a database is presented which is part of an EU-funded project "EPILEPSIAE" aiming at the development of seizure prediction algorithms which can monitor the EEG for seizure precursors. High-quality, long-term continuous EEG data, enriched with clinical metadata, which so far have not been available, are managed in this database as a joint effort of epilepsy centers in Portugal (Coimbra), France (Paris) and Germany (Freiburg). The architecture and the underlying schema are here reported for this database. It was designed for an efficient organization, access and search of the data of 300 epilepsy patients, including high quality long-term EEG recordings, obtained with scalp and intracranial electrodes, as well as derived features and supplementary clinical and imaging data. The organization of this European database will allow for accessibility by a wide spectrum of research groups and may serve as a model for similar databases planned for the future.

Statistical validation of event predictors: a comparative study based on the field of seizure prediction.

The prediction of events is of substantial interest in many research areas. To evaluate the performance of prediction methods, the statistical validation of these methods is of utmost importance. Here, we compare an analytical validation method to numerical approaches that are based on Monte Carlo simulations. The comparison is performed in the field of the prediction of epileptic seizures. In contrast to the analytical validation method, we found that for numerical validation methods insufficient but realistic sample sizes can lead to invalid high rates of false positive conclusions. Hence we outline necessary preconditions for sound statistical tests on above chance predictions.

Seizure prediction in epilepsy: from circadian concepts via probabilistic forecasting to statistical evaluation.

Seizure prediction performance is hampered by high numbers of false predictions. Here we present an approach to reduce the number of false predictions based on circadian concepts. Based on eight representative patients we demonstrate that this approach increases the performance considerably. The fraction of patients for whom we found a significant seizure prediction performance was increased from 25% to 38% by accounting for circadian dependencies.

Identification of preseizure States in epilepsy: a data-driven approach for multichannel EEG recordings.

The retrospective identification of preseizure states usually bases on a time-resolved characterization of dynamical aspects of multichannel neurophysiologic recordings that can be assessed with measures from linear or non-linear time series analysis. This approach renders time profiles of a characterizing measure - so-called measure profiles - for different recording sites or combinations thereof. Various downstream evaluation techniques have been proposed to single out measure profiles that carry potential information about preseizure states. These techniques, however, rely on assumptions about seizure precursor dynamics that might not be generally valid or face the statistical problem of multiple testing. Addressing these issues, we have developed a method to preselect measure profiles that carry potential information about preseizure states, and to identify brain regions associated with seizure precursor dynamics. Our data-driven method is based on the ratio S of the global to local temporal variance of measure profiles. We evaluated its suitability by retrospectively analyzing long-lasting multichannel intracranial EEG recordings from 18 patients that included 133 focal onset seizures, using a bivariate measure for the strength of interactions. In 17/18 patients, we observed S to be significantly correlated with the predictive performance of measure profiles assessed retrospectively by means of receiver-operating-characteristic statistics. Predictive performance was higher for measure profiles preselected with S than for a manual selection using information about onset and spread of seizures. Across patients, highest predictive performance was not restricted to recordings from focal areas, thus supporting the notion of an extended epileptic network in which even distant brain regions contribute to seizure generation. We expect our method to provide further insight into the complex spatial and temporal aspects of the seizure generating process.