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1.
Environ Res ; 245: 118009, 2024 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-38141914

RESUMEN

Nowadays, the urban non-point source (NPS) pollution gradually evolved as the main contributor to urban water contamination since the point source pollution was effectively controlled. It was imperative to perform urban NPS identification in urban river to meet the requirements of precise source governance. In this study, the real-time detection about water quality parameters and fluorescence fingerprints (FFs) was performed for BX River and its outlets during rainfall period. EEM-PARAFAC and component similarity analyses discovered that the pollution encountered by BX River mainly came from road runoff and untreated municipal wastewater (UMWW) overflow. The C1 (tryptophan-like) and C3 (terrestrial humic-like) components located at Ex/Em = âˆ¼230(280)/340 and ∼275/430 nm were both detected in these two kinds of urban NPS. The C2 components of road runoff and UMWW overflow displayed remarkable differences, which located at Ex/Em = 250/385 and 245/365 nm, respectively, thus could be served as indicators for distinguishing them. During rainfall period, the outflow from rainwater outlets (RWOs) constantly showed similar FF features to road runoff, while the FFs of outflow from combined sewer outlets (CSOs) alternated between those of road runoff and UMWW overflow. The FF features of sections in BX River changed in response to the dynamic variations in FFs of the outlets, which revealed real-time pollution causes of BX River. This work not only realized the identification and differentiation of urban NPS, but also elucidated the dynamic variations of pollution characteristics throughout the entire process of "urban NPS-outlets-urban river", and demonstrated the feasibility of FF technique in quickly diagnosing the pollution causes of urban river during rainfall period, which provided important guidance for urban NPS governance.


Asunto(s)
Ríos , Calidad del Agua , Contaminación del Agua , Aguas Residuales , Espectrometría de Fluorescencia , China , Monitoreo del Ambiente/métodos
2.
Acta Biochim Biophys Sin (Shanghai) ; 55(4): 661-671, 2023 May 06.
Artículo en Inglés | MEDLINE | ID: mdl-37154586

RESUMEN

Despite substantial advances that have been made in understanding the etiology of hepatocellular carcinoma (HCC), the early-stage diagnosis and treatment of advanced-stage HCC remain a major challenge. RNF8, an E3 ligase important for the DNA damage response, has been proven to facilitate the progression of breast and lung cancer, but its role in HCC remains unclear. In this study, we find that the expression of RNF8 is up-regulated in HCC tissues and positively correlated with poor prognosis of HCC. Furthermore, silencing RNF8 by siRNAs attenuates the migration of HCC cells and inhibits epithelial-mesenchymal transition (EMT) by regulating the expressions of proteins including N-cadherin, ß-catenin, snail, and ZO-1. Moreover, Kaplan‒Meier survival analysis shows that high RNF8 expression predicts poor survival benefits from sorafenib. Finally, cell viability assay demonstrates that RNF8 depletion enhances the sensitivity of HCC cells to sorafenib and lenvatinib treatment. We hypothesize that the inhibitory role of RNF8 in EMT and its enhancing effects on anti-cancer drugs orchestrate the protective effects of RNF8 deficiency in HCC, which indicates its potential in clinical application.


Asunto(s)
Antineoplásicos , Carcinoma Hepatocelular , Neoplasias Hepáticas , Humanos , Carcinoma Hepatocelular/tratamiento farmacológico , Carcinoma Hepatocelular/genética , Carcinoma Hepatocelular/patología , Sorafenib/farmacología , Sorafenib/uso terapéutico , Neoplasias Hepáticas/tratamiento farmacológico , Neoplasias Hepáticas/genética , Neoplasias Hepáticas/patología , Transición Epitelial-Mesenquimal/genética , Antineoplásicos/farmacología , Antineoplásicos/uso terapéutico , Línea Celular Tumoral , Movimiento Celular/genética , Regulación Neoplásica de la Expresión Génica , Proteínas de Unión al ADN/genética , Ubiquitina-Proteína Ligasas/genética , Ubiquitina-Proteína Ligasas/metabolismo
3.
Int J Mol Sci ; 23(12)2022 Jun 08.
Artículo en Inglés | MEDLINE | ID: mdl-35742854

RESUMEN

The pivotal roles of miRNAs in carcinogenesis, metastasis, and prognosis have been demonstrated recently in various cancers. This study intended to investigate the specific roles of hsa-miR-654-5p in lung cancer, which is, in general, rarely discussed. A series of closed-loop bioinformatic functional analyses were integrated with in vitro experimental validation to explore the overall biological functions and pan-cancer regulation pattern of miR-654-5p. We found that miR-654-5p abundance was significantly elevated in LUAD tissues and correlated with patients' survival. A total of 275 potential targets of miR-654-5p were then identified and the miR-654-5p-RNF8 regulation axis was validated in vitro as a proof of concept. Furthermore, we revealed the tumor-suppressing roles of miR-654-5p and demonstrated that miR-654-5p inhibited the lung cancer cell epithelial-mesenchymal transition (EMT) process, cell proliferation, and migration using target-based, abundance-based, and ssGSEA-based bioinformatic methods and in vitro validation. Following the construction of a protein-protein interaction network, 11 highly interconnected hub genes were identified and a five-genes risk scoring model was developed to assess their potential prognostic ability. Our study does not only provide a basic miRNA-mRNA-phenotypes reference map for understanding the function of miR-654-5p in different cancers but also reveals the tumor-suppressing roles and prognostic values of miR-654-5p.


Asunto(s)
Neoplasias Pulmonares , MicroARNs , Proliferación Celular/genética , Proteínas de Unión al ADN/genética , Transición Epitelial-Mesenquimal/genética , Regulación Neoplásica de la Expresión Génica , Humanos , Neoplasias Pulmonares/genética , Neoplasias Pulmonares/patología , MicroARNs/genética , Ubiquitina-Proteína Ligasas/genética
4.
Microb Cell Fact ; 20(1): 101, 2021 May 17.
Artículo en Inglés | MEDLINE | ID: mdl-34001115

RESUMEN

BACKGROUND: Pinene is a monoterpene, that is used in the manufacture of fragrances, insecticide, fine chemicals, and renewable fuels. Production of pinene by metabolic-engineered microorganisms is a sustainable method. Purple non-sulfur photosynthetic bacteria belong to photosynthetic chassis that are widely used to synthesize natural chemicals. To date, researches on the synthesis of pinene by purple non-sulfur photosynthetic bacteria has not been reported, leaving the potential of purple non-sulfur photosynthetic bacteria synthesizing pinene unexplored. RESULTS: Rhodobacter sphaeroides strain was applied as a model and engineered to express the fusion protein of heterologous geranyl diphosphate synthase (GPPS) and pinene synthase (PS), hence achieving pinene production. The reaction condition of pinene production was optimized and 97.51 µg/L of pinene was yielded. Then, genes of 1-deoxy-D-xylulose 5-phosphate synthase, 1-deoxy-D-xylulose 5-phosphate reductoisomerase and isopentenyl diphosphate isomerase were overexpressed, and the ribosome binding site of GPPS-PS mRNA was optimized, improving pinene titer to 539.84 µg/L. CONCLUSIONS: In this paper, through heterologous expression of GPPS-PS, pinene was successfully produced in R. sphaeroides, and pinene production was greatly improved by optimizing the expression of key enzymes. This is the first report on pinene produce by purple non-sulfur photosynthetic bacteria, which expands the availability of photosynthetic chassis for pinene production.


Asunto(s)
Vías Biosintéticas/genética , Ingeniería Metabólica/métodos , Monoterpenos/análisis , Monoterpenos/metabolismo , Rhodobacter sphaeroides/genética , Rhodobacter sphaeroides/metabolismo , Fotosíntesis
5.
Environ Res ; 194: 110713, 2021 03.
Artículo en Inglés | MEDLINE | ID: mdl-33428908

RESUMEN

To prevent the illegal discharge of metal plating wastewater (MPW), it is necessary to explore a monitoring method that could achieve the identification of MPW in natural water bodies. Fluorescence excitation-emission matrix-parallel factor (EEM-PARAFAC) analysis might be a promising tool for the detection of MPW. However, before conducting the practical monitoring, the apparent fluorescence features of different kinds of MPW must be first understood. In this study, six types of MPW (576 samples) from ten metal plating plants were collected and their fluorescence fingerprints (FFs) were characterized by EEM-PARAFAC analysis. Results showed that pretreatment wastewater (PTW), copper-contained electroplating wastewater (Cu-EPW), nickel-contained electroplating wastewater (Ni-EPW), copper-contained electroless wastewater (Cu-ELW), nickel-contained electroless wastewater (Ni-ELW), and metal plating effluent (MPE) presented one, three, one, one, two, and three types of FFs, respectively. Among them, three individual fluorescent components were identified in Ni-EPW and two were decomposed in other kinds of MPW. Owing to the discrepancies of production processes, electroplating additives, wastewater treatment techniques, and management levels, different metal plating plants owned different FFs. By spectral comparison, the tyrosine-like components in PTW and Ni-ELW might derived from some phenolic and benzenesulfonic acidic compounds. Fluorescent component similarity analysis indicated that EEM-PARAFAC technique could distinguish the raw and treated MPW. This study not only constructed the first FF database for MPW, but also provided valuable guidance for their practical monitoring in aquatic environment.


Asunto(s)
Aguas Residuales , Contaminantes Químicos del Agua , Galvanoplastia , Análisis Factorial , Sustancias Húmicas/análisis , Espectrometría de Fluorescencia , Aguas Residuales/análisis , Contaminantes Químicos del Agua/análisis
6.
Biotechnol Bioeng ; 117(7): 2279-2294, 2020 07.
Artículo en Inglés | MEDLINE | ID: mdl-32175589

RESUMEN

Beyond their widespread application as genome-editing and regulatory tools, clustered regularly interspaced short palindromic repeats (CRISPR)-CRISPR-associated (Cas) systems also play a critical role in nucleic acid detection due to their high sensitivity and specificity. Recently developed Cas family effectors have opened the door to the development of new strategies for detecting different types of nucleic acids for a variety of purposes. Precise and efficient nucleic acid detection using CRISPR-Cas systems has the potential to advance both basic and applied biological research. In this review, we summarize the CRISPR-Cas systems used for the recognition and detection of specific nucleic acids for different purposes, including the detection of genomic DNA, nongenomic DNA, RNA, and pathogenic microbe genomes. Current challenges and further applications of CRISPR-based detection methods will be discussed according to the most recent developments.


Asunto(s)
Sistemas CRISPR-Cas , ADN/genética , ARN/genética , Animales , Repeticiones Palindrómicas Cortas Agrupadas y Regularmente Espaciadas , ADN/análisis , Humanos , Polimorfismo de Nucleótido Simple , ARN/análisis
7.
Acta Biochim Biophys Sin (Shanghai) ; 51(8): 791-798, 2019 Aug 05.
Artículo en Inglés | MEDLINE | ID: mdl-31294443

RESUMEN

MicroRNAs (miRNAs) are a class of endogenous noncoding genes that regulate gene expression at the posttranscriptional level. In recent decades, miRNAs have been reported to play important roles in tumor growth and metastasis, while some reported functions of a specific miRNA in tumorigenesis are contradictory. In this study, we reevaluated the role of miR-214, which has been reported to serve as an oncogene or anti-oncogene in breast cancer metastasis. We found that miR-214 inhibited breast cancer via targeting RNF8, a newly identified regulator that could promote epithelial-mesenchymal transition (EMT). Specifically, the survival rate of breast cancer patients was positively correlated with miR-214 levels and negatively correlated with RNF8 expression. The overexpression of miR-214 inhibited cell proliferation and invasion of breast cancer, while suppression of miR-214 by chemically modified antagomir enhanced the proliferation and invasion of breast cancer cells. Furthermore, miR-214 could modulate the EMT process via downregulating RNF8. To our knowledge, this is the first report that reveals the role of the miR-214-RNF8 axis in EMT, and our results demonstrate a novel mechanism for miR-214 acting as a tumor suppressor through the regulation of EMT.


Asunto(s)
Neoplasias de la Mama/genética , Proteínas de Unión al ADN/metabolismo , Transición Epitelial-Mesenquimal , Regulación Neoplásica de la Expresión Génica , MicroARNs/metabolismo , Ubiquitina-Proteína Ligasas/metabolismo , Neoplasias de la Mama/metabolismo , Línea Celular Tumoral , Movimiento Celular , Proliferación Celular , Regulación hacia Abajo , Femenino , Células HEK293 , Humanos , Células MCF-7 , Invasividad Neoplásica , Metástasis de la Neoplasia
8.
Int J Mol Sci ; 17(6)2016 Jun 06.
Artículo en Inglés | MEDLINE | ID: mdl-27275821

RESUMEN

The herpes simplex virus thymidine kinase/ganciclovir (HSV TK/GCV) system is one of the best studied cancer suicide gene therapy systems. Our previous study showed that caspase 3 expression was upregulated and bladder tumor growth was significantly reduced in rats treated with a combination of Bifidobacterium (BF) and HSV TK/GCV (BF-rTK/GCV). However, it was raised whether the BF-mediated recombinant thymidine kinase combined with ganciclovir (BF-rTK/GCV) was safe to administer via venous for cancer gene therapy. To answer this question, the antitumor effects of BF-rTK/GCV were mainly evaluated in a xenograft nude mouse model bearing MKN-45 gastric tumor cells. The immune response, including analysis of cytokine profiles, was analyzed to evaluate the safety of intramuscular and intravenous injection of BF-rTK in BALB/c mice. The results suggested that gastric tumor growth was significantly inhibited in vivo by BF-rTK/GCV. However, the BF-rTK/GCV had no effect on mouse body weight, indicating that the treatment was safe for the host. The results of cytokine profile analysis indicated that intravenous injection of a low dose of BF-rTK resulted in a weaker cytokine response than that obtained with intramuscular injection. Furthermore, immunohistochemical analysis showed that intravenous administration did not affect the expression of immune-associated TLR2 and TLR4. Finally, the BF-rTK/GCV inhibited vascular endothelial growth factor (VEGF) expression in mouse model, which is helpful for inhibiting of tumor angiogenesis. That meant intravenous administration of BF-rTK/GCV was an effective and safe way for cancer gene therapy.


Asunto(s)
Bifidobacterium/fisiología , Ganciclovir/farmacología , Terapia Genética , Vectores Genéticos/genética , Herpesvirus Humano 1/genética , Neoplasias/genética , Neoplasias/patología , Timidina Quinasa/genética , Administración Intravenosa , Animales , Apoptosis/efectos de los fármacos , Apoptosis/genética , Biomarcadores , Caspasa 8/metabolismo , Línea Celular Tumoral , Citocinas/genética , Citocinas/metabolismo , Modelos Animales de Enfermedad , Ganciclovir/administración & dosificación , Expresión Génica , Terapia Genética/métodos , Vectores Genéticos/administración & dosificación , Vectores Genéticos/efectos adversos , Humanos , Masculino , Ratones , Neoplasias/metabolismo , Neoplasias/terapia , Transducción de Señal/efectos de los fármacos , Receptor Toll-Like 2/genética , Receptor Toll-Like 2/metabolismo , Carga Tumoral/efectos de los fármacos , Carga Tumoral/genética , Ensayos Antitumor por Modelo de Xenoinjerto
9.
Front Oncol ; 14: 1360557, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38496755

RESUMEN

Background: While hemangiomas are the most commonly occurring benign vascular tumors, their occurrence in the gastrointestinal system is rare. This case report presents a unique instance of small intestinal hemangioma in a pediatric patient. Case description: A 21-month-old girl was admitted to the hospital with a history of "recurrent blood in the stool for one year and anemia for five months." Upon evaluation at our facility, abdominal color ultrasound and enhanced CT scans revealed a protruding mass in the wall of the small intestine, leading to a preliminary diagnosis of small intestinal hemangioma. Subsequent single-site umbilical laparoscopic exploration identified a tumor measuring approximately 6cm×2.5cm×1.2cm on the jejunum wall. Consequently, segmental resection of the intestine was performed, and the postoperative pathological diagnosis confirmed cavernous hemangioma. Conclusion: Small intestinal hemangiomas, particularly in pediatric patients, are exceptionally rare and challenging to diagnose as the cause of gastrointestinal bleeding prior to surgery. Hence, small intestinal hemangiomas should be considered in such cases. Laparoscopic surgical resection emerges as the optimal approach for addressing small intestinal hemangiomas.

10.
Clin Pharmacol Ther ; 115(5): 993-1006, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38037868

RESUMEN

Circulating tumor DNA (ctDNA) analysis increasingly provides a promising minimally invasive alternative to tissue biopsies in precision oncology. However, there are no ctDNA analysis approaches available in nasopharyngeal carcinoma (NPC) and current methods of ctDNA mutation profiling have limited resolution because of the high background noise and false-positive rate caused by benign variants in plasma cell-free DNA (cfDNA), majorly generated during clonal hematopoiesis. Although personalized parallel white blood cell genome sequencing suppresses the noise of clonal hematopoiesis variances, the system cost and complexity restrict its extensive application in clinical settings. We developed Matched WBC Genome sequencing Independent CtDNA profiling (MaGIC) approaches, which synergically integrated a ctDNA capturing panel for a hybrid capture cfDNA deep sequencing, in silico background elimination, and a reliable readout measurement. We profiled the ctDNAs of 80 plasma samples from 40 patients with NPC before and during chemotherapy by MaGICs. In addition, the public cfDNA sequencing data and The Cancer Genome Atlas project data were analyzed by MaGICs to evaluate their application in other scenarios of patient classification. The MaGIC version-2 has the ability to predict the chemosensitivity of patients with NPC with high accuracy by utilizing a single sample of liquid biopsy from each patient prior to a standardized treatment regimen. Moreover, both versions of MaGICs are of ideal performance in the diagnosis of patients with prostate cancer by liquid biopsy and prognosis prediction of multiple cancers by tissue biopsy. This study has the potential to enhance the sensitivity and expand the application scope of ctDNA detection, independently of other paired genome sequencing methods. As a result, it might further increase the clinical utilization of liquid biopsy based on ctDNA.


Asunto(s)
ADN Tumoral Circulante , Neoplasias Nasofaríngeas , Neoplasias de la Próstata , Masculino , Humanos , ADN Tumoral Circulante/genética , Carcinoma Nasofaríngeo/tratamiento farmacológico , Carcinoma Nasofaríngeo/genética , Medicina de Precisión , Mutación , Neoplasias Nasofaríngeas/diagnóstico , Neoplasias Nasofaríngeas/tratamiento farmacológico , Neoplasias Nasofaríngeas/genética , Biomarcadores de Tumor/genética , Secuenciación de Nucleótidos de Alto Rendimiento/métodos
11.
Nat Commun ; 15(1): 2740, 2024 Mar 28.
Artículo en Inglés | MEDLINE | ID: mdl-38548733

RESUMEN

Photoreceptor proteins utilise chromophores to sense light and trigger a biological response. The discovery that adenosylcobalamin (or coenzyme B12) can act as a light-sensing chromophore heralded a new field of B12-photobiology. Although microbial genome analysis indicates that photoactive B12-binding domains form part of more complex protein architectures, regulating a range of molecular-cellular functions in response to light, experimental evidence is lacking. Here we identify and characterise a sub-family of multi-centre photoreceptors, termed photocobilins, that use B12 and biliverdin (BV) to sense light across the visible spectrum. Crystal structures reveal close juxtaposition of the B12 and BV chromophores, an arrangement that facilitates optical coupling. Light-triggered conversion of the B12 affects quaternary structure, in turn leading to light-activation of associated enzyme domains. The apparent widespread nature of photocobilins implies involvement in light regulation of a wider array of biochemical processes, and thus expands the scope for B12 photobiology. Their characterisation provides inspiration for the design of broad-spectrum optogenetic tools and next generation bio-photocatalysts.


Asunto(s)
Pigmentos Biliares , Fotorreceptores Microbianos , Fotoquímica , Biliverdina , Proteínas Bacterianas/metabolismo , Fotorreceptores Microbianos/química , Luz
12.
Methods Mol Biol ; 2630: 25-45, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-36689174

RESUMEN

Low-cost detection of miRNAs has caught broad attention in recent years due to the potential application of these small noncoding RNAs for diagnostics and therapeutic purposes. Their small size and low abundance, however, derive challenges in engineering robust detection tools. To date, multiple detection assays have been developed to achieve highly specific recognition of trace amount of miRNA with state-of-the-art nucleic acid detection and signal amplification techniques. In this chapter we describe how isothermal amplification techniques and CRISPR/Cas-based techniques can be integrated to generate rationally designed miRNA detection systems for specific miRNA.


Asunto(s)
Técnicas Biosensibles , MicroARNs , MicroARNs/genética , Sistemas CRISPR-Cas , Técnicas de Amplificación de Ácido Nucleico/métodos , Bioensayo
13.
Front Endocrinol (Lausanne) ; 14: 1215469, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37795359

RESUMEN

Objective: To evaluate the prevalence of abnormal endocrine dysfunction for recurrent pregnancy loss (RPL) amongst patients with two versus three or more pregnancy losses. Methods: This cross-sectional study retrospectively collected pre-pregnancy data of 537 women diagnosed with RPL in Shengjing Hospital of China Medical University from 2017 to 2022, including the baseline data of patients and the test results of endocrine factors. Several endocrine dysfunction included in this study were: thyroid dysfunction, obesity, hyperprolactinemia, polycystic ovary syndrome and blood glucose abnormality. Furthermore, vitamin D level were collected to study its relationship with endocrine dysfunction. Finally, we subdivided the patients according to the number of previous pregnancy loss and compared the prevalence of endocrine dysfunction between subgroups. Results: Among 537 RPL patients, 278 (51.8%) patients had abnormal endocrine test results. The highest incidence of endocrine dysfunction was thyroid dysfunction (24.39%, 131/537), followed by hyperprolactinemia (17.34%, 85/490), obesity (10.8%, 58/537), polycystic ovary syndrome (10.50%, 56/533), and abnormal blood glucose (5.29%, 27/510). Only 2.47%(13/527) of patients have vitamin D level that reach the standard. After subdividing the population according to the number of pregnancy loss, we did not find that the incidence of endocrine dysfunction (P=0.813), thyroid dysfunction (P=0.905), hyperprolactinemia (P=0.265), polycystic ovary syndrome (P=0.638), blood glucose abnormality (P=0.616) and vitamin D deficiency (P=0.908) were different among patients with two versus three or more pregnancy losses. However, obesity (P=0.003) was found more frequently observed in patients with more times of pregnancy loss. Conclusion: The prevalence of endocrine dysfunction in RPL population is high. There is no difference in the prevalence of endocrine dysfunction, except for obesity, among patients with two or more pregnancy losses, which may suggest investigations of endocrine dysfunction when patients have two pregnancy losses.


Asunto(s)
Aborto Habitual , Hiperprolactinemia , Síndrome del Ovario Poliquístico , Enfermedades de la Tiroides , Embarazo , Femenino , Humanos , Síndrome del Ovario Poliquístico/complicaciones , Síndrome del Ovario Poliquístico/diagnóstico , Síndrome del Ovario Poliquístico/epidemiología , Estudios Transversales , Estudios Retrospectivos , Hiperprolactinemia/diagnóstico , Hiperprolactinemia/epidemiología , Hiperprolactinemia/complicaciones , Glucemia , Aborto Habitual/diagnóstico , Aborto Habitual/epidemiología , Aborto Habitual/etiología , Obesidad/complicaciones , Enfermedades de la Tiroides/complicaciones , Enfermedades de la Tiroides/diagnóstico , Enfermedades de la Tiroides/epidemiología , Vitamina D
14.
Chin Herb Med ; 15(3): 421-429, 2023 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-37538867

RESUMEN

Objective: Cassiae Semen (CS, Juemingzi in Chinese) has been used for thousands of years in ancient Chinese history for relieving constipation, improving liver function as well as preventing myopia. Here we aimed to elucidate the anti-steatosis effect and underlying mechanism of CS against non-alcoholic fatty liver disease (NAFLD). Methods: High-performance liquid chromatography (HPLC) was used to identify the major components of CS water extract. Mice were fed with a high-fat and sugar-water (HFSW) diet to induce hepatic steatosis and then treated with CS. The anti-NAFLD effect was determined by measuring serum biomarkers and histopathology staining. Additionally, the effects of CS on cell viability and lipid metabolism in oleic acid and palmitic acid (OAPA)-treated HepG2 cells were measured. The expression of essential genes and proteins involved in lipid metabolism and autophagy signalings were measured to uncover the underlying mechanism. Results: Five compounds, including aurantio-obtusin, rubrofusarin gentiobioside, cassiaside C, emodin and rhein were simultaneously identified in CS extract. CS not only improved the diet-induced hepatic steatosis in vivo, as indicated by decreased number and size of lipid droplets, hepatic and serum triglycerides (TG) levels, but also markedly attenuated the OAPA-induced lipid accumulation in hepatocytes. These lipid-lowering effects induced by CS were largely dependent on the inhibition of fatty acid synthase (FASN) and the activation of autophagy-related signaling, including AMP-activated protein kinase (AMPK), light chain 3-II (LC3-II)/ LC3-1 and autophagy-related gene5 (ATG5). Conclusion: Our study suggested that CS effectively protected liver steatosis via decreasing FASN-related fatty acid synthesis and activating AMPK-mediated autophagy, which might become a promising therapeutic strategy for relieving NAFLD.

15.
Water Res ; 229: 119408, 2023 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-36462254

RESUMEN

Snow owns stronger adsorption capacity for organic pollutants compared with rain. Huge amounts of anthropogenic dissolved organic matters (DOMs) in the atmosphere may enter the water environment with urban snow and increase water pollution risk. Extracting stable pollution features of urban snow is conducive to identifying the urban snow pollution from the water environment. Herein, we systematically explored the spectroscopic and compositional profiles of urban snow in Beijing from three snow events by multiple analytical tools and extracted stable pollution features of urban snow for the first time. Results showed that conventional pollutants with high concentration were detected in urban snow. The fluorescence signals of humic-like and some protein-like materials, the molecular weight distributions of chromophoric DOM at 254 nm and humic-like materials, and 172 kinds of lignin-like molecular formulas were extracted as stable features for urban snow. These stable features of urban snow laid the foundation for the identification of urban snow pollution and the analysis of the impact mechanisms of atmospheric pollution sources on the water environment.


Asunto(s)
Monitoreo del Ambiente , Contaminantes Ambientales , Monitoreo del Ambiente/métodos , Materia Orgánica Disuelta , Nieve/química , Espectrometría de Fluorescencia , Agua
16.
Front Bioeng Biotechnol ; 11: 1062769, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-36890909

RESUMEN

Proteins, as gifts from nature, provide structure, sequence, and function templates for designing biomaterials. As first reported here, one group of proteins called reflectins and derived peptides were found to present distinct intracellular distribution preferences. Taking their conserved motifs and flexible linkers as Lego bricks, a series of reflectin-derivates were designed and expressed in cells. The selective intracellular localization property leaned on an RMs (canonical conserved reflectin motifs)-replication-determined manner, suggesting that these linkers and motifs were constructional fragments and ready-to-use building blocks for synthetic design and construction. A precise spatiotemporal application demo was constructed in the work by integrating RLNto2 (as one representative of a synthetic peptide derived from RfA1) into the Tet-on system to effectively transport cargo peptides into nuclei at selective time points. Further, the intracellular localization of RfA1 derivatives was spatiotemporally controllable with a CRY2/CIB1 system. At last, the functional homogeneities of either motifs or linkers were verified, which made them standardized building blocks for synthetic biology. In summary, the work provides a modularized, orthotropic, and well-characterized synthetic-peptide warehouse for precisely regulating the nucleocytoplasmic localization of proteins.

17.
Comput Intell Neurosci ; 2022: 7113765, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36035858

RESUMEN

Insulators identification and their missing defect detection are of paramount importance for the intelligent inspection of high-voltage transmission lines. As the backgrounds are complex, some insulators may be occluded, and the missing defect of the insulator is so small that it is not easily detected from aerial images with different backgrounds. To address the above issues, in this study, a cascaded You Only Look Once (YOLO) models are mainly explored to perform insulators and their defect detection in aerial images. Firstly, the datasets used for insulators location and missing defect detection are created. Secondly, a new model is proposed to locate the position of insulators, which is improved in the feature extraction network and multisacle prediction network based on previous YOLOv3-dense model. An improved YOLOv4-tiny model is used to conduct missing defect detection on the detected insulators. And then, the proposed YOLO models are trained and tested on the built datasets, respectively. Finally, the final models are cascaded for insulators identification and their missing defect detection. The average precision of missing defect detection can reach 98.4%, which is 5.2% higher than that of faster RCNN and 10.2% higher than that of SSD. The running time of the cascaded YOLO models for missing defect detection can reach 106 frames per second. Extensive experiments demonstrate that the proposed deep learning models achieve good performance in insulator identification and its missing defect detection from the inspection of high-voltage transmission lines.


Asunto(s)
Redes Neurales de la Computación
18.
Comput Struct Biotechnol J ; 20: 5477-5489, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36249565

RESUMEN

In the eukaryotic cellular milieu, proteins are continuously synthesized and degraded effectively via endogenous protein degradation machineries such as the ubiquitin-proteasome and lysosome pathways. By reengineering and repurposing these natural protein regulatory mechanisms, the targeted protein degradation (TPD) strategies are presenting biologists with powerful tools to manipulate the abundance of proteins of interest directly, precisely, and reversibly at the post-translational level. In recent years, TPD is gaining massive attention and is recognized as a paradigm shift both in basic research, application-oriented synthetic biology, and pioneering clinical work. In this review, we summarize the updated information, especially the engineering efforts and developmental route, of current state-of-the-art TPD technology such as Trim-Away, LYTACs, and AUTACs. Besides, the general design principle, benefits, problems, and opportunities to be addressed were further analyzed, with the aim of providing guidelines for exploration, discovery, and further application of novel TPD tools in the future.

19.
Phytomedicine ; 103: 154219, 2022 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-35691075

RESUMEN

BACKGROUND: Metabolic associated fatty liver disease (MAFLD) is a progressive chronic liver disease, yet there is still a lack of effective pharmacological therapies at present. Saikosaponin D (SSd) has been reported to exhibit hepatoprotective and anti-steatosis activities in our previous research. PURPOSE: The current study aims to further investigate the underlying mechanisms of SSd on MAFLD from the perspectives of the crosstalk between fatty acid (FA) biosynthesis and catabolism to provide strong support for further clinical management of MAFLD. METHODS: A MAFLD mouse model induced by a high-fat diet and glucose-fructose water (HFSW) was used for in vivo study. HepG2 cells, primary mouse hepatocytes and adipocytes were further employed for in vitro studies. RESULTS: SSd improved intracellular lipid accumulation both in the liver and adipose tissues in HFSW-fed mice. Mechanistically, SSd may serve as a potent PPARα agonist, and the activation of PPARα by SSd in both hepatocytes and adipocytes not only promoted FA oxidation but also concurrently induced INSIG1/2 expression, which subsequently inhibited SREBP1c maturation and ultimately FA synthesis. Moreover, the regulative effect of SSd on lipid metabolism was abolished by the PPARα inhibitor, GW6471. CONCLUSION: This study demonstrated that SSd improved lipid homeostasis by coordinately regulating PPARα activation-mediated both inhibition of SREBP1c-dependent FA biosynthesis and induction of FA degradation, and thus shed novel light on the discovery of SSd-based therapeutic strategies for MAFLD.


Asunto(s)
Enfermedad del Hígado Graso no Alcohólico , PPAR alfa , Saponinas , Proteína 1 de Unión a los Elementos Reguladores de Esteroles , Animales , Dieta Alta en Grasa/efectos adversos , Células Hep G2 , Hepatocitos/efectos de los fármacos , Hepatocitos/metabolismo , Humanos , Metabolismo de los Lípidos/efectos de los fármacos , Ratones , Ratones Endogámicos C57BL , Enfermedad del Hígado Graso no Alcohólico/tratamiento farmacológico , Enfermedad del Hígado Graso no Alcohólico/metabolismo , Ácido Oleanólico/análogos & derivados , PPAR alfa/agonistas , PPAR alfa/metabolismo , Saponinas/farmacología , Transducción de Señal/efectos de los fármacos , Proteína 1 de Unión a los Elementos Reguladores de Esteroles/metabolismo
20.
Front Cell Dev Biol ; 10: 862011, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35813206

RESUMEN

Reflectin proteins are natural copolymers consisting of repeated canonical domains. They are located in a biophotonic system called Bragg lamellae and manipulate the dynamic structural coloration of iridocytes. Their biological functions are intriguing, but the underlying mechanism is not fully understood. Reflectin A1, A2, B1, and C were found to present distinguished cyto-/nucleoplasmic localization preferences in the work. Comparable intracellular localization was reproduced by truncated reflectin variants, suggesting a conceivable evolutionary order among reflectin proteins. The size-dependent access of reflectin variants into the nucleus demonstrated a potential model of how reflectins get into Bragg lamellae. Moreover, RfA1 was found to extensively interact with the cytoskeleton, including its binding to actin and enrichment at the microtubule organizing center. This implied that the cytoskeleton system plays a fundamental role during the organization and transportation of reflectin proteins. The findings presented here provide evidence to get an in-depth insight into the evolutionary processes and working mechanisms of reflectins, as well as novel molecular tools to achieve tunable intracellular transportation.

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