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1.
Sci Data ; 8(1): 276, 2021 10 28.
Artículo en Inglés | MEDLINE | ID: mdl-34711851

RESUMEN

Circular RNA (circRNA) are a recently discovered class of RNA characterized by a covalently-bonded back-splice junction. As circRNAs are inherently more stable than other RNA species, they may be detected extracellularly in peripheral biofluids and provide novel biomarkers. While circRNA have been identified previously in peripheral biofluids, there are few datasets for circRNA junctions from healthy controls. We collected 134 plasma and 114 urine samples from 54 healthy, male college athlete volunteers, and used RNASeq to determine circRNA content. The intersection of six bioinformatic tools identified 965 high-confidence, characteristic circRNA junctions in plasma and 72 in urine. Highly-expressed circRNA junctions were validated by qRT-PCR. Longitudinal samples were collected from a subset, demonstrating circRNA expression was stable over time. Lastly, the ratio of circular to linear transcripts was higher in plasma than urine. This study provides a valuable resource for characterization of circRNA in plasma and urine from healthy volunteers, one that can be developed and reassessed as researchers probe the circRNA contents of biofluids across physiological changes and disease states.


Asunto(s)
Atletas , ARN Circular/sangre , ARN Circular/orina , Adolescente , Voluntarios Sanos , Humanos , Masculino , RNA-Seq , Adulto Joven
2.
Sci Rep ; 7: 44061, 2017 03 17.
Artículo en Inglés | MEDLINE | ID: mdl-28303895

RESUMEN

Interest in circulating RNAs for monitoring and diagnosing human health has grown significantly. There are few datasets describing baseline expression levels for total cell-free circulating RNA from healthy control subjects. In this study, total extracellular RNA (exRNA) was isolated and sequenced from 183 plasma samples, 204 urine samples and 46 saliva samples from 55 male college athletes ages 18-25 years. Many participants provided more than one sample, allowing us to investigate variability in an individual's exRNA expression levels over time. Here we provide a systematic analysis of small exRNAs present in each biofluid, as well as an analysis of exogenous RNAs. The small RNA profile of each biofluid is distinct. We find that a large number of RNA fragments in plasma (63%) and urine (54%) have sequences that are assigned to YRNA and tRNA fragments respectively. Surprisingly, while many miRNAs can be detected, there are few miRNAs that are consistently detected in all samples from a single biofluid, and profiles of miRNA are different for each biofluid. Not unexpectedly, saliva samples have high levels of exogenous sequence that can be traced to bacteria. These data significantly contribute to the current number of sequenced exRNA samples from normal healthy individuals.


Asunto(s)
Ácidos Nucleicos Libres de Células/análisis , ARN/análisis , Adolescente , Adulto , Ácidos Nucleicos Libres de Células/aislamiento & purificación , Humanos , Masculino , ARN/sangre , ARN/aislamiento & purificación , ARN/orina , Saliva/química , Adulto Joven
3.
Phys Sportsmed ; 23(1): 65-69, 1995 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-29278086

RESUMEN

In brief Though not frequently reported in the literature, plantar fascia tears or ruptures can occur in running and jumping sports. Misdiagnosis as an acute flare of the much more common plantar fasciitis is possible. Though the injury is initially quite disabling, athletes can-as in this case report-return within weeks to competition with proper diagnosis, intervention, and rehabilitation.

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