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1.
Sensors (Basel) ; 22(18)2022 Sep 09.
Artículo en Inglés | MEDLINE | ID: mdl-36146168

RESUMEN

The effects of mutual coupling on the scanning characteristics of a four-element linear rectangular dielectric resonator antenna array (RDRA) are investigated for different inter-element spacing in this work. In particular, the gain and half-power beam width (HPBW) of an RDRA are studied for various scan angles in the E- and H-plane configurations. It is shown that for both the E and H planes, mutual coupling has an adverse effect on the performance of both phased array configurations. The H-plane array, however, is more stable than the E-plane array in terms of a gain and beam width performance comparison. The HPBW increases and gain decreases more in the E plane than the H plane when the scan angle is increased.

2.
Sensors (Basel) ; 21(6)2021 Mar 10.
Artículo en Inglés | MEDLINE | ID: mdl-33801835

RESUMEN

This paper presents a novel incentive-based load shedding management scheme within a microgrid environment equipped with the required IoT infrastructure. The proposed mechanism works on the principles of reverse combinatorial auction. We consider a region of multiple consumers who are willing to curtail their load in the peak hours in order to gain some incentives later. Using the properties of combinatorial auctions, the participants can bid in packages or combinations in order to maximize their and overall social welfare of the system. The winner determination problem of the proposed combinatorial auction, determined using particle swarm optimization algorithm and hybrid genetic algorithm, is also presented in this paper. The performance evaluation and stability test of the proposed scheme are simulated using MATLAB and presented in this paper. The results indicate that combinatorial auctions are an excellent choice for load shedding management where a maximum of 50 users participate.

3.
Sensors (Basel) ; 20(17)2020 Aug 27.
Artículo en Inglés | MEDLINE | ID: mdl-32867171

RESUMEN

Deployment of efficient and cost-effective parking lots is a known bottleneck for the electric vehicles (EVs) sector. A comprehensive solution incorporating the requirements of all key stakeholders is required. Taking up the challenge, we propose a real-time EV smart parking lot model to attain the following objectives: (a) maximize the smart parking lot revenue by accommodating maximum number of EVs and (b) minimize the cost of power consumption by participating in a demand response (DR) program offered by the utility since it is a tool to answer and handle the electric power usage requirements for charging the EV in the smart parking lot. With a view to achieving these objectives, a linear programming-based binary/cyclic (0/1) optimization technique is developed for the EV charge scheduling process. It is difficult to solve the problems of binary optimization in real-time given that the complexity of the problem increases with the increase in number of EV. We deploy a simplified convex relaxation technique integrated with the linear programming solution to overcome this problem. The algorithm achieves: minimum power consumption cost of the EV smart parking lot; efficient utilization of available power; maximization of the number of the EV to be charged; and minimum impact on the EV battery lifecycle. DR participation provide benefits by offering time-based and incentive-based hourly intelligent charging schedules for the EV. A thorough comparison is drawn with existing variable charging rate-based techniques in order to demonstrate the comparative validity of our proposed technique. The simulation results show that even under no DR event, the proposed scheme results in 2.9% decrease in overall power consumption cost for a 500 EV scenario when compared to variable charging rate method. Moreover, in similar conditions, such as no DR event and for 500 EV arrived per day, there is a 2.8% increase in number of EV charged per day, 3.2% improvement in the average state-of-charge (SoC) of the EV, 12.47% reduction in the average time intervals required to achieve final SoC.

4.
Sensors (Basel) ; 20(14)2020 Jul 09.
Artículo en Inglés | MEDLINE | ID: mdl-32659882

RESUMEN

Target detection and tracking is important in military as well as in civilian applications. In order to detect and track high-speed incoming threats, modern surveillance systems are equipped with multiple sensors to overcome the limitations of single-sensor based tracking systems. This research proposes the use of information from RADAR and Infrared sensors (IR) for tracking and estimating target state dynamics. A new technique is developed for information fusion of the two sensors in a way that enhances performance of the data association algorithm. The measurement acquisition and processing time of these sensors is not the same; consequently the fusion center measurements arrive out of sequence. To ensure the practicality of system, proposed algorithm compensates the Out of Sequence Measurements (OOSMs) in cluttered environment. This is achieved by a novel algorithm which incorporates a retrodiction based approach to compensate the effects of OOSMs in a modified Bayesian technique. The proposed modification includes a new gating strategy to fuse and select measurements from two sensors which originate from the same target. The state estimation performance is evaluated in terms of Root Mean Squared Error (RMSE) for both position and velocity, whereas, track retention statistics are evaluated to gauge the performance of the proposed tracking algorithm. The results clearly show that the proposed technique improves track retention and and false track discrimination (FTD).

5.
Sensors (Basel) ; 19(24)2019 Dec 05.
Artículo en Inglés | MEDLINE | ID: mdl-31817333

RESUMEN

Fusion of the Global Positioning System (GPS) and Inertial Navigation System (INS) for navigation of ground vehicles is an extensively researched topic for military and civilian applications. Micro-electro-mechanical-systems-based inertial measurement units (MEMS-IMU) are being widely used in numerous commercial applications due to their low cost; however, they are characterized by relatively poor accuracy when compared with more expensive counterparts. With a sudden boom in research and development of autonomous navigation technology for consumer vehicles, the need to enhance estimation accuracy and reliability has become critical, while aiming to deliver a cost-effective solution. Optimal fusion of commercially available, low-cost MEMS-IMU and the GPS may provide one such solution. Different variants of the Kalman filter have been proposed and implemented for integration of the GPS and the INS. This paper proposes a framework for the fusion of adaptive Kalman filters, based on Sage-Husa and strong tracking filtering algorithms, implemented on MEMS-IMU and the GPS for the case of a ground vehicle. The error models of the inertial sensors have also been implemented to achieve reliable and accurate estimations. Simulations have been carried out on actual navigation data from a test vehicle. Measurements were obtained using commercially available GPS receiver and MEMS-IMU. The solution was shown to enhance navigation accuracy when compared to conventional Kalman filter.

6.
J Med Syst ; 43(8): 271, 2019 Jul 05.
Artículo en Inglés | MEDLINE | ID: mdl-31278506

RESUMEN

We present a novel reconstruction method for dynamic MR images from highly under-sampled k-space measurements. The reconstruction problem is posed as spectrally regularized matrix recovery problem, where kernel-based low rank constraint is employed to effectively utilize the non-linear correlations between the images in the dynamic sequence. Unlike other kernel-based methods, we use a single-step regularized reconstruction approach to simultaneously learn the kernel basis functions and the weights. The objective function is optimized using variable splitting and alternating direction method of multipliers. The framework can seamlessly handle additional sparsity constraints such as spatio-temporal total variation. The algorithm performance is evaluated on a numerical phantom and in vivo data sets and it shows significant improvement over the comparison methods.


Asunto(s)
Procesamiento de Imagen Asistido por Computador/métodos , Imagen por Resonancia Magnética/métodos , Algoritmos , Humanos , Hígado/diagnóstico por imagen , Imagen de Perfusión Miocárdica
7.
BMC Med Inform Decis Mak ; 18(1): 46, 2018 06 25.
Artículo en Inglés | MEDLINE | ID: mdl-29940927

RESUMEN

BACKGROUND: Text mining (TM) methods have been used extensively to extract relations and events from the literature. In addition, TM techniques have been used to extract various types or dimensions of interpretative information, known as Meta-Knowledge (MK), from the context of relations and events, e.g. negation, speculation, certainty and knowledge type. However, most existing methods have focussed on the extraction of individual dimensions of MK, without investigating how they can be combined to obtain even richer contextual information. In this paper, we describe a novel, supervised method to extract new MK dimensions that encode Research Hypotheses (an author's intended knowledge gain) and New Knowledge (an author's findings). The method incorporates various features, including a combination of simple MK dimensions. METHODS: We identify previously explored dimensions and then use a random forest to combine these with linguistic features into a classification model. To facilitate evaluation of the model, we have enriched two existing corpora annotated with relations and events, i.e., a subset of the GENIA-MK corpus and the EU-ADR corpus, by adding attributes to encode whether each relation or event corresponds to Research Hypothesis or New Knowledge. In the GENIA-MK corpus, these new attributes complement simpler MK dimensions that had previously been annotated. RESULTS: We show that our approach is able to assign different types of MK dimensions to relations and events with a high degree of accuracy. Firstly, our method is able to improve upon the previously reported state of the art performance for an existing dimension, i.e., Knowledge Type. Secondly, we also demonstrate high F1-score in predicting the new dimensions of Research Hypothesis (GENIA: 0.914, EU-ADR 0.802) and New Knowledge (GENIA: 0.829, EU-ADR 0.836). CONCLUSION: We have presented a novel approach for predicting New Knowledge and Research Hypothesis, which combines simple MK dimensions to achieve high F1-scores. The extraction of such information is valuable for a number of practical TM applications.


Asunto(s)
Investigación Biomédica/métodos , Minería de Datos/métodos , Conocimiento , Proyectos de Investigación , Máquina de Vectores de Soporte , Humanos
8.
BMC Bioinformatics ; 14: 14, 2013 Jan 16.
Artículo en Inglés | MEDLINE | ID: mdl-23323936

RESUMEN

BACKGROUND: Negation occurs frequently in scientific literature, especially in biomedical literature. It has previously been reported that around 13% of sentences found in biomedical research articles contain negation. Historically, the main motivation for identifying negated events has been to ensure their exclusion from lists of extracted interactions. However, recently, there has been a growing interest in negative results, which has resulted in negation detection being identified as a key challenge in biomedical relation extraction. In this article, we focus on the problem of identifying negated bio-events, given gold standard event annotations. RESULTS: We have conducted a detailed analysis of three open access bio-event corpora containing negation information (i.e., GENIA Event, BioInfer and BioNLP'09 ST), and have identified the main types of negated bio-events. We have analysed the key aspects of a machine learning solution to the problem of detecting negated events, including selection of negation cues, feature engineering and the choice of learning algorithm. Combining the best solutions for each aspect of the problem, we propose a novel framework for the identification of negated bio-events. We have evaluated our system on each of the three open access corpora mentioned above. The performance of the system significantly surpasses the best results previously reported on the BioNLP'09 ST corpus, and achieves even better results on the GENIA Event and BioInfer corpora, both of which contain more varied and complex events. CONCLUSIONS: Recently, in the field of biomedical text mining, the development and enhancement of event-based systems has received significant interest. The ability to identify negated events is a key performance element for these systems. We have conducted the first detailed study on the analysis and identification of negated bio-events. Our proposed framework can be integrated with state-of-the-art event extraction systems. The resulting systems will be able to extract bio-events with attached polarities from textual documents, which can serve as the foundation for more elaborate systems that are able to detect mutually contradicting bio-events.


Asunto(s)
Minería de Datos/métodos , Algoritmos , Inteligencia Artificial
9.
Heliyon ; 9(4): e15407, 2023 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-37123955

RESUMEN

Computer science graduates face a massive gap between industry-relevant skills and those learned at school. Industry practitioners often counter a huge challenge when moving from academics to industry, requiring a completely different set of skills and knowledge. It is essential to fill the gap between the industry's required skills and those taught at varsities. In this study, we leverage deep learning and big data to propose a framework that maps the required skills with those acquired by computing graduates. Based on the mapping, we recommend enhancing the computing curriculum to match the industry-relevant skills. Our proposed framework consists of four layers: data, embedding, mapping, and a curriculum enhancement layer. Based on the recommendations from the mapping module, we made revisions and modifications to the computing curricula. Finally, we perform a case study of the Norwegian IT jobs market, where we make recommendations for data science and software engineering-related jobs. We argue that by using our proposed methodology and analysis, a significant enhancement in the computing curriculum is possible to help increase employability, student satisfaction, and smart decision-making.

10.
Sci Rep ; 13(1): 4412, 2023 Mar 17.
Artículo en Inglés | MEDLINE | ID: mdl-36932131

RESUMEN

Recently, researchers have applied blockchain technology in vehicular networks to take benefit of its security features, such as confidentiality, authenticity, immutability, integrity, and non-repudiation. The resource-intensive nature of the blockchain consensus algorithm makes it a challenge to integrate it with vehicular networks due to the time-sensitive message dissemination requirements. Moreover, most of the researchers have used the Proof-of-Work consensus algorithm, or its variant to add a block to a blockchain, which is a highly resource-intensive process with greater latency. In this paper, we propose a consensus algorithm for vehicular networks named as Vehicular network Based Consensus Algorithm (VBCA) to ensure data security across the network using blockchain that maintains a secured pool of confirmed messages exchanged in the network. The proposed scheme, based on a consortium blockchain, reduces average transaction latency, and increases the number of confirmed transactions in a decentralized manner, without compromising the integrity and security of data. The simulation results show improved performance in terms of confirmed transactions, transaction latency, number of blocks, and block creation time.

11.
Artículo en Inglés | MEDLINE | ID: mdl-34977844

RESUMEN

BACKGROUND: The SARS-Cov-2 virus (commonly known as COVID-19) has resulted in substantial casualties in many countries. The first case of COVID-19 was reported in China towards the end of 2019. Cases started to appear in several other countries (including Pakistan) by February 2020. To analyze the spreading pattern of the disease, several researchers used the Susceptible-Infectious-Recovered (SIR) model. However, the classical SIR model cannot predict the death rate. OBJECTIVE: In this article, we present a Death-Infection-Recovery (DIR) model to forecast the virus spread over a window of one (minimum) to fourteen (maximum) days. Our model captures the dynamic behavior of the virus and can assist authorities in making decisions on non-pharmaceutical interventions (NPI), like travel restrictions, lockdowns, etc. METHOD: The size of training dataset used was 134 days. The Auto Regressive Integrated Moving Average (ARIMA) model was implemented using XLSTAT (add-in for Microsoft Excel), whereas the SIR and the proposed DIR model was implemented using python programming language. We compared the performance of DIR model with the SIR model and the ARIMA model by computing the Percentage Error and Mean Absolute Percentage Error (MAPE). RESULTS: Experimental results demonstrate that the maximum% error in predicting the number of deaths, infections, and recoveries for a period of fourteen days using the DIR model is only 2.33%, using ARIMA model is 10.03% and using SIR model is 53.07%. CONCLUSION: This percentage of error obtained in forecasting using DIR model is significantly less than the% error of the compared models. Moreover, the MAPE of the DIR model is sufficiently below the two compared models that indicates its effectiveness.

12.
J Ambient Intell Humaniz Comput ; : 1-12, 2022 Apr 08.
Artículo en Inglés | MEDLINE | ID: mdl-35432622

RESUMEN

We argue that social computing and its diverse applications can contribute to the attainment of sustainable development goals (SDGs)-specifically to the SDGs concerning gender equality and empowerment of all women and girls, and to make cities and human settlements inclusive. To achieve the above goals for the sustainable growth of societies, it is crucial to study gender-based violence (GBV) in a smart city context, which is a common component of violence across socio-economic groups globally. This paper analyzes the nature of news articles reported in English newspapers of Pakistan, India, and the UK-accumulating 12,693 gender-based violence-related news articles. For the qualitative textual analysis, we employ Latent Dirichlet allocation for topic modeling and propose a Doc2Vec based word-embeddings model to classify gender-based violence-related content, called GBV2Vec. Further, by leveraging GBV2Vec, we also build an online tool that analyzes the sensitivity of Gender-based violence-related content from the textual data. We run a case study on GBV concerning COVID-19 by feeding the data collected through Google News API. Finally, we show different news reporting trends and the nature of the gender-based violence committed during the testing times of COVID-19. The approach and the toolkit that this paper proposes will be of great value to decision-makers and human rights activists, given the prompt and coordinated performance against gender-based violence in smart city context-and can contribute to the achievement of SDGs for sustainable growth of human societies.

13.
PLoS One ; 17(3): e0266103, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35358269

RESUMEN

Recommender Systems (RS) are widely used to help people or group of people in finding their required information amid the issue of ever-growing information overload. The existing group recommender approaches consider users to be part of a single group only, but in real life a user may be associated with multiple groups having conflicting preferences. For instance, a person may have different preferences in watching movies with friends than with family. In this paper, we address this problem by proposing a Hybrid Two-phase Group Recommender Framework (HTGF) that takes into consideration the possibility of users having simultaneous membership of multiple groups. Unlike the existing group recommender systems that use traditional methods like K-Means, Pearson correlation, and cosine similarity to form groups, we use Fuzzy C-means clustering which assigns a degree of membership to each user for each group, and then Pearson similarity is used to form groups. We demonstrate the usefulness of our proposed framework using a movies data set. The experiments were conducted on MovieLens 1M dataset where we used Neural Collaborative Filtering to recommend Top-k movies to each group. The results demonstrate that our proposed framework outperforms the traditional approaches when compared in terms of group satisfaction parameters, as well as the conventional metrics of precision, recall, and F-measure.


Asunto(s)
Algoritmos , Películas Cinematográficas , Análisis por Conglomerados , Humanos
14.
Sci Rep ; 12(1): 16636, 2022 10 05.
Artículo en Inglés | MEDLINE | ID: mdl-36198707

RESUMEN

In regions with limited potable water availability, membrane desalination is being employed to filter water using a pressure-driven approach. Because of the high energy consumption required to produce the pressure differential needed for this method, researchers have been trying different geometric designs of spacer filaments to enhance the amount of permeate flux in terms of energy utilization. The purpose of spacer filaments is to support membranes structurally and induce turbulent mixing in spiral wound membrane desalination. In this paper, the improvement of mass transfer in desalination driven by reverse osmosis has been studied using Computational Fluid Dynamics (CFD) with the introduction of spiral wound membranes that are lined with spacer filaments in a zig-zag formation having alternating diameters for strands. The fluid flow characteristics for a 2-dimensional geometric model were resolved using the open-source program OpenFOAM by changing the Reynolds number to just before the inception of instabilities. Ratios of alternate strand diameters were also varied between one and two. Based on a detailed analysis of velocity contours, pressure distribution, wall shear stresses, and steady-state vortex systems, the research findings offer guidance for employing alternating strand design in zig-zag formation for optimum mass transfer and minimal pressure drop when accounting for concentration polarization.


Asunto(s)
Incrustaciones Biológicas , Agua Potable , Purificación del Agua , Membranas Artificiales , Ósmosis , Purificación del Agua/métodos
15.
PLoS One ; 17(6): e0268867, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35687613

RESUMEN

The present work investigates a novel four-port, multiple-input multiple-output (MIMO), single element dielectric resonator antenna (DRA) for sub-6 GHz band. The DRA is designed and fabricated into a symmetric cross shape and fed using a coplanar waveguide (CPW) feed. A single radiator with four ports is rarely found in the literature. The -10 dB impedance bandwidth covered by the antenna is from 5.52 GHz to 6.2 GHz (11.6%) which covers fifth generation (5G) new radio (NR) bands N47 and wireless local area network (WLAN) IEEE 802.11a band. The isolation between orthogonal ports is about 15 dB while the isolation between opposite ports is 12 dB. The radiation pattern of the proposed antenna is bidirectional due to the absence of a ground plane below the DRA. The orthogonal modes excited in the DRA are [Formula: see text] and [Formula: see text] through the four symmetrical CPW feeds. The simulated and measured results of the proposed design show that MIMO characteristics are achieved by pattern diversity between the ports. Due to the perfect symmetry of the design, the proposed work could be extended to MIMO array applications as well.


Asunto(s)
Redes de Área Local , Tecnología Inalámbrica , Dolor en el Pecho , Impedancia Eléctrica , Humanos
16.
PeerJ Comput Sci ; 8: e888, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35494840

RESUMEN

Nearly 3.5 billion humans have oral health issues, including dental caries, which requires dentist-patient exposure in oral examinations. The automated approaches identify and locate carious regions from dental images by localizing and processing either colored photographs or X-ray images taken via specialized dental photography cameras. The dentists' interpretation of carious regions is difficult since the detected regions are masked using solid coloring and limited to a particular dental image type. The software-based automated tools to localize caries from dental images taken via ordinary cameras requires further investigation. This research provided a mixed dataset of dental photographic (colored or X-ray) images, instantiated a deep learning approach to enhance the existing dental image carious regions' localization procedure, and implemented a full-fledged tool to present carious regions via simple dental images automatically. The instantiation mainly exploits the mixed dataset of dental images (colored photographs or X-rays) collected from multiple sources and pre-trained hybrid Mask RCNN to localize dental carious regions. The evaluations performed by the dentists showed that the correctness of annotated datasets is up to 96%, and the accuracy of the proposed system is between 78% and 92%. Moreover, the system achieved the overall satisfaction level of dentists above 80%.

17.
PLoS One ; 17(12): e0278324, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36512616

RESUMEN

The growing issue of demand-supply management between the prosumers and the local energy market requires an efficient and reliable energy management model. The microlayers, such as prosumers, energy districts, and macro players, namely retail dealers and wholesale dealers play a pivotal role in achieving mutual benefits. The stochastic nature of renewable energy generation in energy districts requires an effective model that can contemplate all stochastic complexities. Therefore, this paper proposes a mutual trade model between energy districts and smart grid to authorize the prosumers for mutual energy transactions under the stochastic adaptive-service level agreement. Moreover, multiple smart contacts are developed between the stakeholders to design adaptability and stochastic behavior of wind speed and solar irradiance. The real-time adaptations of the stochastic adaptive-service level agreement are based on technical beneficial feasibility and achieved through stochastic and adaptive functions. The optimized solution based on a genetic algorithm is proposed for the energy cost and energy surplus of prosumers and output parameters of the mutual trade model (grid revenue). In the context of mutual benefits associated with balanced demand and supply, the economic load dispatch and simplex method maximization are used for optimized demand-supply energy management. Moreover, the effectiveness of the proposed adaptive and stochastic mutual trade model is validated through simulation and statistical analysis.


Asunto(s)
Energía Renovable , Viento , Simulación por Computador , Sistemas de Computación
18.
BMC Bioinformatics ; 12: 393, 2011 Oct 10.
Artículo en Inglés | MEDLINE | ID: mdl-21985429

RESUMEN

BACKGROUND: Biomedical papers contain rich information about entities, facts and events of biological relevance. To discover these automatically, we use text mining techniques, which rely on annotated corpora for training. In order to extract protein-protein interactions, genotype-phenotype/gene-disease associations, etc., we rely on event corpora that are annotated with classified, structured representations of important facts and findings contained within text. These provide an important resource for the training of domain-specific information extraction (IE) systems, to facilitate semantic-based searching of documents. Correct interpretation of these events is not possible without additional information, e.g., does an event describe a fact, a hypothesis, an experimental result or an analysis of results? How confident is the author about the validity of her analyses? These and other types of information, which we collectively term meta-knowledge, can be derived from the context of the event. RESULTS: We have designed an annotation scheme for meta-knowledge enrichment of biomedical event corpora. The scheme is multi-dimensional, in that each event is annotated for 5 different aspects of meta-knowledge that can be derived from the textual context of the event. Textual clues used to determine the values are also annotated. The scheme is intended to be general enough to allow integration with different types of bio-event annotation, whilst being detailed enough to capture important subtleties in the nature of the meta-knowledge expressed in the text. We report here on both the main features of the annotation scheme, as well as its application to the GENIA event corpus (1000 abstracts with 36,858 events). High levels of inter-annotator agreement have been achieved, falling in the range of 0.84-0.93 Kappa. CONCLUSION: By augmenting event annotations with meta-knowledge, more sophisticated IE systems can be trained, which allow interpretative information to be specified as part of the search criteria. This can assist in a number of important tasks, e.g., finding new experimental knowledge to facilitate database curation, enabling textual inference to detect entailments and contradictions, etc. To our knowledge, our scheme is unique within the field with regards to the diversity of meta-knowledge aspects annotated for each event.


Asunto(s)
Minería de Datos , Almacenamiento y Recuperación de la Información , Sistemas de Administración de Bases de Datos , Humanos , Sistemas de Información , Conocimiento , Semántica
19.
BMC Bioinformatics ; 12 Suppl 8: S11, 2011 Oct 03.
Artículo en Inglés | MEDLINE | ID: mdl-22151769

RESUMEN

BACKGROUND: The selection of relevant articles for curation, and linking those articles to experimental techniques confirming the findings became one of the primary subjects of the recent BioCreative III contest. The contest's Protein-Protein Interaction (PPI) task consisted of two sub-tasks: Article Classification Task (ACT) and Interaction Method Task (IMT). ACT aimed to automatically select relevant documents for PPI curation, whereas the goal of IMT was to recognise the methods used in experiments for identifying the interactions in full-text articles. RESULTS: We proposed and compared several classification-based methods for both tasks, employing rich contextual features as well as features extracted from external knowledge sources. For IMT, a new method that classifies pair-wise relations between every text phrase and candidate interaction method obtained promising results with an F1 score of 64.49%, as tested on the task's development dataset. We also explored ways to combine this new approach and more conventional, multi-label document classification methods. For ACT, our classifiers exploited automatically detected named entities and other linguistic information. The evaluation results on the BioCreative III PPI test datasets showed that our systems were very competitive: one of our IMT methods yielded the best performance among all participants, as measured by F1 score, Matthew's Correlation Coefficient and AUC iP/R; whereas for ACT, our best classifier was ranked second as measured by AUC iP/R, and also competitive according to other metrics. CONCLUSIONS: Our novel approach that converts the multi-class, multi-label classification problem to a binary classification problem showed much promise in IMT. Nevertheless, on the test dataset the best performance was achieved by taking the union of the output of this method and that of a multi-class, multi-label document classifier, which indicates that the two types of systems complement each other in terms of recall. For ACT, our system exploited a rich set of features and also obtained encouraging results. We examined the features with respect to their contributions to the classification results, and concluded that contextual words surrounding named entities, as well as the MeSH headings associated with the documents were among the main contributors to the performance.


Asunto(s)
Minería de Datos , Proteómica , Humanos , Publicaciones Periódicas como Asunto , Mapeo de Interacción de Proteínas , Proteínas/metabolismo
20.
R Soc Open Sci ; 8(1): 201823, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33614100

RESUMEN

Since the coronavirus disease (COVID-19) outbreak in December 2019, studies have been addressing diverse aspects in relation to COVID-19 and Variant of Concern 202012/01 (VOC 202012/01) such as potential symptoms and predictive tools. However, limited work has been performed towards the modelling of complex associations between the combined demographic attributes and varying nature of the COVID-19 infections across the globe. This study presents an intelligent approach to investigate the multi-dimensional associations between demographic attributes and COVID-19 global variations. We gather multiple demographic attributes and COVID-19 infection data (by 8 January 2021) from reliable sources, which are then processed by intelligent algorithms to identify the significant associations and patterns within the data. Statistical results and experts' reports indicate strong associations between COVID-19 severity levels across the globe and certain demographic attributes, e.g. female smokers, when combined together with other attributes. The outcomes will aid the understanding of the dynamics of disease spread and its progression, which in turn may support policy makers, medical specialists and society, in better understanding and effective management of the disease.

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