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Biosci Biotechnol Biochem ; 88(6): 620-629, 2024 May 22.
Artículo en Inglés | MEDLINE | ID: mdl-38479783

RESUMEN

Human transglutaminase 1 (TG1) modulates skin development, while its involvement in diseases remains poorly understood, necessitating comprehensive exploration of its substrate interactions. To study the substrate profile of TG1, an in vitro selection system based on cDNA display technology was used to screen two peptide libraries with mutations at varying distance from the reactive glutamine. Next-generation sequencing and bioinformatics analysis of the selected DNA pools revealed a detailed TG1 substrate profile, indicating preferred and non-preferred amino acid sequences. The peptide sequence, AEQHKLPSKWPF, was identified showing high reactivity and specificity to TG1. The position weight matrix calculated from the per amino acid enrichment factors was employed to search human proteins using an in-house algorithm, revealing six known TG1 substrate proteins with high scores, alongside a list of candidate substrates currently under investigation. Our findings are expected to assist in future medical diagnoses and development of treatments for skin disorders.


Asunto(s)
ADN Complementario , Secuenciación de Nucleótidos de Alto Rendimiento , Transglutaminasas , Humanos , Transglutaminasas/genética , Transglutaminasas/metabolismo , Especificidad por Sustrato , ADN Complementario/genética , Secuencia de Aminoácidos , Biblioteca de Péptidos
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