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1.
Hum Genomics ; 17(1): 36, 2023 04 25.
Artículo en Inglés | MEDLINE | ID: mdl-37098607

RESUMEN

BACKGROUND: Phenylketonuria (PKU) is a common, congenital, autosomal recessive, metabolic disorder caused by Phenylalanine hydroxylase (PAH) variants. METHODS: 967 PKU patients from Gansu, China were genotyped by Sanger sequencing, multiplex ligation-dependent probe amplification, and whole exome sequencing. We analyzed the variants of PAH exons, their flanking sequences, and introns. RESULTS: The detection of deep intronic variants in PAH gene can significantly improve the genetic diagnostic rate of PKU. The distribution of PAH variants among PKU subtypes may be related to the unique genetic background in Gansu, China. CONCLUSION: The identification of PAH hotspot variants will aid the development of large-scale neonatal genetic screening for PKU. The five new PAH variants found in this study further expand the spectrum of PAH variants. Genotype-phenotype correlation analysis may help predict the prognosis of PKU patients and enable precise treatment regimens to be developed.


Asunto(s)
Fenilalanina Hidroxilasa , Fenilcetonurias , Humanos , Fenilalanina Hidroxilasa/genética , Fenilalanina Hidroxilasa/metabolismo , Fenilcetonurias/genética , Fenilcetonurias/diagnóstico , Mutación , Genotipo , Estudios de Asociación Genética , China , Fenotipo
2.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 41(3): 363-367, 2024 Mar 10.
Artículo en Zh | MEDLINE | ID: mdl-38448030

RESUMEN

OBJECTIVE: To explore the genetic basis for a patient with unexplained developmental delay and special facial features. METHODS: A male patient admitted to the Maternal and Child Health Care Hospital of Gansu Province on May 27, 2021 due to infertility was selected as the study subject. Clinical data of the patient was collected, and genomic DNA was extracted from peripheral blood samples from the patient and his parents. Whole exome sequencing (WES) was carried out, and candidate variant was verified by Sanger sequencing. RESULTS: The patient was found to harbor a 2.54 Mb deletion in 1p36.33p36.32 and a heterozygous c.1123G>C (p.E375Q) variant of the CHD3 gene, neither of which was detected in his parents. CONCLUSION: The patient was diagnosed with Snijders Blok-Campeau syndrome in conjunct with 1p36 deletion syndrome, which has enabled genetic counseling for his family.


Asunto(s)
Deleción Cromosómica , Trastornos de los Cromosomas , Discapacidades del Desarrollo , Facies , Hipertelorismo , Discapacidad Intelectual , Niño , Masculino , Humanos , Familia , Asesoramiento Genético , Cromosomas Humanos Par 1
3.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 41(4): 456-460, 2024 Apr 10.
Artículo en Zh | MEDLINE | ID: mdl-38565512

RESUMEN

OBJECTIVE: To explore the genetic basis for a patient with autosomal dominant retinitis pigmentosa (RP). METHODS: A male patient with RP treated at Gansu Provincial Maternal and Child Health Care Hospital in September 2019 was selected as the study subject. Clinical data was collected. Peripheral blood samples of the patient and his parents were subjected to whole exome sequencing (WES). Candidate variant was validated by Sanger sequencing and bioinformatic analysis. RESULTS: The patient, a 29-year-old male, developed night blindness, amblyopia, visual field defects and optic disc abnormalities since childhood. Gene sequencing revealed that he has harbored a heterozygous c.942G>C (p.Lys314Asn) variant of the IMPDH1 gene, which was inherited from his mother, whilst his father was of the wild type. Based on the guidelines from the American College of Medical Genetics and Genomics, the c.942G>C variant was predicted as likely pathogenic (PM1+PM2_Supporting+PP3+PP1). CONCLUSION: The c.942G>C (p.Lys314Asn) variant in the IMPDH1 gene probably underlay the RP in this patient.


Asunto(s)
Retinitis Pigmentosa , Adulto , Femenino , Humanos , Masculino , Biología Computacional , Genómica , Heterocigoto , IMP Deshidrogenasa , Madres , Mutación , Retinitis Pigmentosa/genética
4.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 41(2): 129-133, 2024 Feb 10.
Artículo en Zh | MEDLINE | ID: mdl-38311548

RESUMEN

OBJECTIVE: To explore the genetic basis of eighteen patients with Tetrahydrobiopterin deficiency (BH4D) from Gansu Province. METHODS: Eighteen patients diagnosed with BH4D at Gansu Provincial Maternal and Child Health Care Hospital from January 2018 to December 2021 were selected as the study subjects. Whole exome sequencing was carried out, and candidate variants were verified by Sanger sequencing. RESULTS: All of the thirty-six alleles of the eighteen patients were successfully determined by molecular genetic testing. Sixteen patients were found to harbor variants of the PTS gene, and two had harbored variants of the QDPR gene. Ten variants were detected in the PTS gene, with the most common ones being c.259C>T (34.38%) and c.286G>A (15.63%). Based on the guidelines from the American College of Medical Genetics and Genomics (ACMG), the c.259C>T was classified as a pathogenic variant, whilst the c.286G>A, c.166G>A, c.200C>T, c.272A>G, c.402A>C, c.421G>T, c.84_291A>G and c.317C>T were classified as likely pathogenic variants. A novel c.289_290insCTT variant was classified as likely pathogenic (PM1+PM2_Supporting+PM3+PP3+PP4). The two variants (c.478C>T and c.665C>T) detected in the QDPR gene were both classified as variants of uncertain significance (PM1+PM2_Supporting+PP3+PP4). CONCLUSION: Genetic testing has clarified the pathogenic variants in these BH4D patients, which has enabled timely and accurate clinical intervention and treatment, and provided a reference for genetic counseling and reproductive guidance for their families.


Asunto(s)
Fenilcetonurias , Niño , Humanos , Alelos , Fenilcetonurias/genética , Familia , Asesoramiento Genético , Pruebas Genéticas , Mutación
5.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 41(3): 306-311, 2024 Mar 10.
Artículo en Zh | MEDLINE | ID: mdl-38448019

RESUMEN

OBJECTIVE: To explore the genetic basis for a Chinese pedigree affected with co-morbid Ornithine carbamoyl transferase deficiency (OTCD) and MECP2 duplication syndrome. METHODS: A proband who was admitted to the Neonatal Intensive Care Unit of Gansu Provincial Maternal and Child Health Care Hospital on December 19, 2017 was selected as the study subject. High-throughput sequencing and multiplex ligation-dependent probe amplification (MLPA) were carried out for her pedigree, and short tandem repeat-based linkage analysis and chromosome copy number variation sequencing (CNV-seq) were used for the prenatal diagnosis. RESULTS: The proband, a 3-day-old female, was found to harbor heterozygous deletion of exons 7-9 of the OTC gene. Based on the guidelines from the American College of Medical Genetics and Genomics (ACMG), the variant was classified as likely pathogenic (PVS1+PM2_Supporting+PP4). The proband was diagnosed with OTCD , which was in keeping with her acute encephalopathy and metabolic abnormalities (manifesting as hyperammonemia, decreased blood citrulline, and increased urine orotic acid). Prenatal diagnosis was carried out for the subsequent pregnancy. The fetus did not harbor the exons 7-9 deletion of the OTC gene, but was found to carry a duplication in Xq28 region (which encompassed the whole region of MECP2 duplication syndrome) and was positive for the SRY sequence. The same duplication was also found in the proband and her mother. Considering the possible existence of X-chromosome inactivation, the proband was diagnosed with two X-linked recessive disorders including OTCD and MECP2 duplication syndrome, and the fetus was determined as a male affected with the MECP2 duplication syndrome. CONCLUSION: Discoveries of the pathogenic variants underlying the OTCD and MECP2 duplication syndrome have enabled clinical intervention, treatment, genetic counseling and prenatal diagnosis for this pedigree.


Asunto(s)
Transferasas de Carboxilo y Carbamoilo , Discapacidad Intelectual Ligada al Cromosoma X , Enfermedad por Deficiencia de Ornitina Carbamoiltransferasa , Niño , Femenino , Humanos , Recién Nacido , Masculino , Embarazo , China , Variaciones en el Número de Copia de ADN , Ornitina , Enfermedad por Deficiencia de Ornitina Carbamoiltransferasa/diagnóstico , Enfermedad por Deficiencia de Ornitina Carbamoiltransferasa/genética , Linaje , Diagnóstico Prenatal
6.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 41(4): 467-472, 2024 Apr 10.
Artículo en Zh | MEDLINE | ID: mdl-38565514

RESUMEN

OBJECTIVE: To analyze the clinical phenotype and genotypes of two children with Carnitine-acylcarnitine translocase deficiency (CACTD). METHODS: Two children diagnosed with CACTD at the Gansu Provincial Maternal and Child Health Care Hospital respectively on January 3 and November 19, 2018 were selected as the study subjects. Trio-whole exome sequencing (trio-WES) was carried out, and candidate variants were validated through Sanger sequencing and pathogenicity analysis. RESULTS: Both children were males and had manifested mainly with hypoglycemia. Trio-WES and Sanger sequencing showed that child 1 had harbored compound heterozygous variants of the SLC25A20 gene, namely c.49G>C (p.Gly17Arg) and c.106-2A>G, which were inherited from his father and mother, respectively. Child 2 had harbored homozygous c.199-10T>G variants of the SLC25A20 gene, which were inherited from both of his parents. Among these, the c.106-2A>G and c.49G>C variants were unreported previously. Based on the guidelines from the American College of Medical Genetics and Genomics (ACMG), the c.49G>C (p.Gly17Arg), c.106-2A>G, and c.199-10T>G variants were classified as likely pathogenic (PM2_supporting+PP3+PM3_strong+PP4), pathogenic (PVS1+PM2_supporting+PM5+PP3), and pathogenic (PVS1+PM2_supporting+PP3+PP5), respectively. CONCLUSION: Combined with their clinical phenotype and genetic analysis, both children were diagnosed with CACTD. Above finding has provided a basis for their treatment as well as genetic counseling and prenatal diagnosis for their families.


Asunto(s)
Carnitina Aciltransferasas/deficiencia , Asesoramiento Genético , Genómica , Errores Innatos del Metabolismo Lipídico , Niño , Masculino , Femenino , Embarazo , Humanos , Linaje , Madres , Mutación , Proteínas de Transporte de Membrana
7.
Zhongguo Dang Dai Er Ke Za Zhi ; 26(1): 67-71, 2024 Jan 15.
Artículo en Zh | MEDLINE | ID: mdl-38269462

RESUMEN

OBJECTIVES: To investigate the disease spectrum and pathogenic genes of inherited metabolic disorder (IMD) among neonates in Gansu Province of China. METHODS: A retrospective analysis was conducted on the tandem mass spectrometry data of 286 682 neonates who received IMD screening in Gansu Provincial Maternal and Child Health Hospital from January 2018 to December 2021. A genetic analysis was conducted on the neonates with positive results in tandem mass spectrometry during primary screening and reexamination. RESULTS: A total of 23 types of IMD caused by 28 pathogenic genes were found in the 286 682 neonates, and the overall prevalence rate of IMD was 0.63 (1/1 593), among which phenylketonuria showed the highest prevalence rate of 0.32 (1/3 083), followed by methylmalonic acidemia (0.11, 1/8 959) and tetrahydrobiopterin deficiency (0.06, 1/15 927). In this study, 166 variants were identified in the 28 pathogenic genes, with 13 novel variants found in 9 genes. According to American College of Medical Genetics and Genomics guidelines, 5 novel variants were classified as pathogenic variants, 7 were classified as likely pathogenic variants, and 1 was classified as the variant of uncertain significance. CONCLUSIONS: This study enriches the database of pathogenic gene variants for IMD and provides basic data for establishing an accurate screening and diagnosis system for IMD in this region.


Asunto(s)
Errores Innatos del Metabolismo de los Aminoácidos , Enfermedades Metabólicas , Niño , Recién Nacido , Humanos , Estudios Retrospectivos , Enfermedades Metabólicas/genética , Errores Innatos del Metabolismo de los Aminoácidos/genética , China , Salud Infantil
8.
Opt Express ; 31(6): 10401-10410, 2023 Mar 13.
Artículo en Inglés | MEDLINE | ID: mdl-37157587

RESUMEN

We demonstrate that the influence of Kerr effect on valley-Hall topological transport in graphene metasurfaces can be used to implement an all-optical switch. In particular, by taking advantage of the large Kerr coefficient of graphene, the index of refraction of a topologically-protected graphene metasurface can be tuned via a pump beam, which results in an optically controllable frequency shift of the photonic bands of the metasurface. This spectral variation can in turn be readily employed to control and switch the propagation of an optical signal in certain waveguide modes of the graphene metasurface. Importantly, our theoretical and computational analysis reveals that the threshold pump power needed to optically switch ON/OFF the signal is strongly dependent on the group velocity of the pump mode, especially when the device is operated in the slow-light regime. This study could open up new routes towards active photonic nanodevices whose underlying functionality stems from their topological characteristics.

9.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 40(4): 468-472, 2023 Apr 10.
Artículo en Zh | MEDLINE | ID: mdl-36972944

RESUMEN

OBJECTIVE: To analyze the clinical data and genetic characteristics of a child with fibrocartilage hyperplasia type 1 (FBCG1). METHODS: A child who was admitted to Gansu Provincial Maternity and Child Health Care Hospital on January 21, 2021 due to severe pneumonia and suspected congenital genetic metabolic disorder was selected as the study subject. Clinical data of the child was collected, and genomic DNA was extracted from peripheral blood samples from the child and her parents. Whole exome sequencing (WES) was carried out, and candidate variants were verified by Sanger sequencing. RESULTS: The patient, a 1-month-old girl, had presented with facial dysmorphism, abnormal skeletal development, and clubbing of upper and lower limbs. WES revealed that she has harbored compound heterozygous variants c.3358G>A/c.2295+1G>A of the COL11A1 gene, which has been associated with fibrochondrogenesis. Sanger sequencing has verified that the variants have been respectively inherited from her father and mother, both of whom were phenotypically normal. Based on the guidelines from the American College of Medical Genetics and Genomics (ACMG), the c.3358G>A variant was graded as likely pathogenic (PM1+PM2_Supporting+PM3+PP3), and so was the c.2295+1G>A variant (PVS1+PM2_Supporting). CONCLUSION: The compound heterozygous variants c.3358G>A/c.2295+1G>A probably underlay the disease in this child. Above finding has facilitated definite diagnosis, genetic counseling for her family.


Asunto(s)
Anomalías Múltiples , Colágeno Tipo XI , Femenino , Humanos , Lactante , Colágeno Tipo XI/genética , Asesoramiento Genético , Genómica , Mutación
10.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 40(1): 7-11, 2023 Jan 10.
Artículo en Zh | MEDLINE | ID: mdl-36584992

RESUMEN

OBJECTIVE: To analyze the clinical phenotype and results of genetic testing in three children with Cornelia de Lange syndrome (CdLS). METHODS: Clinical data of the children and their parents were collected. Peripheral blood samples of the pedigrees were collected for next generation sequencing analysis. RESULTS: The main clinical manifestations of the three children have included growth delay, mental retardation, peculiar facies and other accompanying symptoms. Based on the criteria proposed by the International Diagnostic Consensus, all three children were suspected for CdLS. As revealed by whole exome sequencing, child 1 has harbored NIPBL gene c.5567_5569delGAA insTAT missense variant, child 2 has harbored SMC1A gene c.607A>G missense variant, and child 3 has harbored HDAC8 gene c.628+1G>A splicing variant. All of the variants were de novo in origin. CONCLUSION: All of the children were diagnosed with CdLS due to pathogenic variants of the associated genes, among which the variants of NIPBL and HDAC8 genes were unreported previously. Above finding has enriched the spectrum of pathogenic variants underlying CdLS.


Asunto(s)
Proteínas de Ciclo Celular , Síndrome de Cornelia de Lange , Humanos , Proteínas de Ciclo Celular/genética , Síndrome de Cornelia de Lange/genética , Síndrome de Cornelia de Lange/diagnóstico , Genotipo , Fenotipo , Pruebas Genéticas , Histona Desacetilasas/genética , Proteínas Represoras/genética
11.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 40(2): 171-176, 2023 Feb 10.
Artículo en Zh | MEDLINE | ID: mdl-36709935

RESUMEN

OBJECTIVE: To analyze the clinical phenotype and genetic basis for a child with acute form of tyrosinemia type I (TYRSN1). METHODS: A child with TYRSN1 who presented at the Gansu Provincial Maternal and Child Health Care Hospital in October 2020 was selected as the subject. The child was subjected to tandem mass spectrometry (MS-MS) and urine gas chromatography-mass spectrometry (GC-MS) for the detection of inherited metabolic disorders, in addition with whole exome sequencing (WES). Candidate variants were validated by Sanger sequencing. RESULTS: The child's clinical features included abdominal distension, hepatomegaly, anemia and tendency of bleeding. By mass spectrometry analysis, her serum and urine tyrosine and succinylacetone levels have both exceeded the normal ranges. WES and Sanger sequencing revealed that she has harbored c.1062+5G>A and c.943T>C (p.Cys315Arg) compound heterozygous variants of the FAH gene, which were inherited from her father and mother, respectively. Among these, the c.943T>C was unreported previously. CONCLUSION: Considering her clinical phenotype and result of genetic testing, the child was diagnosed with TYRSN1 (acute type). The compound heterozygous variants of the FAH gene probably underlay the disease in this child. Above finding has further expanded the spectrum of FAH gene variants, and provided a basis for accurate treatment, genetic counseling and prenatal diagnosis for her family.


Asunto(s)
Tirosinemias , Femenino , Humanos , Cromatografía de Gases y Espectrometría de Masas , Pruebas Genéticas , Mutación , Fenotipo , Diagnóstico Prenatal , Tirosinemias/diagnóstico , Tirosinemias/genética , Niño
12.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 40(6): 680-685, 2023 Jun 10.
Artículo en Zh | MEDLINE | ID: mdl-37212002

RESUMEN

OBJECTIVE: To explore the genetic etiology of a child with Pitt-Hopkins syndrome. METHODS: A child who had presented at the Medical Genetics Center of Gansu Provincial Maternal and Child Health Care Hospital on February 24, 2021 and his parents were selected as the study subjects. Clinical data of the child was collected. Genomic DNA was extracted from peripheral blood samples of the child and his parents and subjected to trio-whole exome sequencing (trio-WES). Candidate variant was verified by Sanger sequencing. Karyotype analysis was also carried out for the child, and her mother was subjected to ultra-deep sequencing and prenatal diagnosis upon her subsequent pregnancy. RESULTS: The clinical manifestations of the proband included facial dysmorphism, Simian crease, and mental retardation. Genetic testing revealed that he has carried a heterozygous c.1762C>T (p.Arg588Cys) variant of the TCF4 gene, for which both parents had a wild-type. The variant was unreported previously and was rated as likely pathogenic based on the guidelines of the American College of Medical Genetics and Genomics (ACMG). Ultra-deep sequencing indicated that the variant has a proportion of 2.63% in the mother, suggesting the presence of low percentage mosaicism. Prenatal diagnosis of amniotic fluid sample suggested that the fetus did not carry the same variant. CONCLUSION: The heterozygous c.1762C>T variant of the TCF4 gene probably underlay the disease in this child and has derived from the low percentage mosaicism in his mother.


Asunto(s)
Discapacidad Intelectual , Mosaicismo , Niño , Femenino , Humanos , Masculino , Embarazo , Discapacidad Intelectual/genética , Madres , Mutación , Padres , Factor de Transcripción 4/genética
13.
Plant J ; 107(1): 67-76, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-33860570

RESUMEN

Strigolactones play crucial roles in regulating plant architecture and development, as endogenous hormones, and orchestrating symbiotic interactions with fungi and parasitic plants, as components of root exudates. rac-GR24 is currently the most widely used strigolactone analog and serves as a reference compound in investigating the action of strigolactones. In this study, we evaluated a suite of debranones and found that 2-nitrodebranone (2NOD) exhibited higher biological activity than rac-GR24 in various aspects of plant growth and development in Arabidopsis, including hypocotyl elongation inhibition, root hair promotion and senescence acceleration. The enhanced activity of 2NOD in promoting AtD14-SMXL7 and AtD14-MAX2 interactions indicates that the molecular structure of 2NOD is a better match for the ligand perception site pocket of D14. Moreover, 2NOD showed lower activity than rac-GR24 in promoting Orobanche cumana seed germination, suggesting its higher ability to control plant architecture than parasitic interactions. In combination with the improved stability of 2NOD, these results demonstrate that 2NOD is a strigolactone analog that can specifically mimic the activity of strigolactones and that 2NOD exhibits strong potential as a tool for studying the strigolactone signaling pathway in plants.


Asunto(s)
Arabidopsis/efectos de los fármacos , Arabidopsis/crecimiento & desarrollo , Compuestos Heterocíclicos con 3 Anillos/farmacología , Lactonas/farmacología , Reguladores del Crecimiento de las Plantas/farmacología , Proteínas de Arabidopsis/química , Proteínas de Arabidopsis/metabolismo , Proteínas Portadoras/metabolismo , Proteínas Co-Represoras/metabolismo , Furanos/química , Furanos/farmacología , Germinación/efectos de los fármacos , Hipocótilo/efectos de los fármacos , Simulación del Acoplamiento Molecular , Orobanche/efectos de los fármacos , Orobanche/crecimiento & desarrollo , Reguladores del Crecimiento de las Plantas/química , Malezas/efectos de los fármacos , Malezas/crecimiento & desarrollo , Receptores de Superficie Celular/química , Receptores de Superficie Celular/metabolismo , Semillas/efectos de los fármacos , Agua/química
14.
Plant Physiol ; 185(4): 1411-1428, 2021 04 23.
Artículo en Inglés | MEDLINE | ID: mdl-33793945

RESUMEN

Seeds of the root parasitic plant Striga hermonthica can sense very low concentrations of strigolactones (SLs) exuded from host roots. The S. hermonthica hyposensitive to light (ShHTL) proteins are putative SL receptors, among which ShHTL7 reportedly confers sensitivity to picomolar levels of SL when expressed in Arabidopsis thaliana. However, the molecular mechanism underlying ShHTL7 sensitivity is unknown. Here we determined the ShHTL7 crystal structure and quantified its interactions with various SLs and key interacting proteins. We established that ShHTL7 has an active-site pocket with broad-spectrum response to different SLs and moderate affinity. However, in contrast to other ShHTLs, we observed particularly high affinity of ShHTL7 for F-box protein AtMAX2. Furthermore, ShHTL7 interacted with AtMAX2 and with transcriptional regulator AtSMAX1 in response to nanomolar SL concentration. ShHTL7 mutagenesis analyses identified surface residues that contribute to its high-affinity binding to AtMAX2 and residues in the ligand binding pocket that confer broad-spectrum response to SLs with various structures. Crucially, yeast-three hybrid experiments showed that AtMAX2 confers responsiveness of the ShHTL7-AtSMAX1 interaction to picomolar levels of SL in line with the previously reported physiological sensitivity. These findings highlight the key role of SL-induced MAX2-ShHTL7-SMAX1 complex formation in determining the sensitivity to SL. Moreover, these data suggest a strategy to screen for compounds that could promote suicidal seed germination at physiologically relevant levels.


Asunto(s)
Compuestos Heterocíclicos con 3 Anillos/metabolismo , Interacciones Huésped-Parásitos/fisiología , Lactonas/metabolismo , Ligandos , Raíces de Plantas/metabolismo , Malezas/metabolismo , Striga/fisiología , Striga/parasitología , Interacciones Huésped-Parásitos/genética , Péptidos y Proteínas de Señalización Intracelular/genética , Péptidos y Proteínas de Señalización Intracelular/metabolismo , Transducción de Señal/genética , Transducción de Señal/fisiología , Striga/genética
15.
Opt Lett ; 45(11): 3151-3154, 2020 Jun 01.
Artículo en Inglés | MEDLINE | ID: mdl-32479482

RESUMEN

Topologically protected plasmonic modes located inside topological bandgaps are attracting increasing attention, chiefly due to their robustness against disorder-induced backscattering. Here, we introduce a bilayer graphene metasurface that possesses plasmonic topological valley interface modes when the mirror symmetry of the metasurface is broken by horizontally shifting the lattice of holes of the top layer of the two freestanding graphene layers in opposite directions. In this configuration, light propagation along the domain-wall interface of the bilayer graphene metasurface shows unidirectional features. Moreover, we have designed a molecular sensor based on the topological properties of this metasurface using the fact that the Fermi energy of graphene varies upon chemical doping. This effect induces strong variation of the transmission of the topological guided modes, which can be employed as the underlying working principle of gas sensing devices. Our work opens up new ways of developing robust integrated plasmonic devices for molecular sensing.

16.
J Cell Physiol ; 234(8): 13182-13190, 2019 08.
Artículo en Inglés | MEDLINE | ID: mdl-30536619

RESUMEN

Prostate cancer (CaP) is the second most common cancer in men worldwide in 2012, and radiation therapy is one of the most common definitive treatment options for localized CaP. However, radioresistance is a major challenge for the current radiotherapy, accumulating evidences suggest microRNAs (miRNAs), as an important regulator in cellular ionizing radiation (IR) responses, are closely correlated with radiosensitivity in many cancers. Here, we identified microRNA-16-5p(miR-16-5p) is significantly upregulated in CaP LNCaP cells following IR and can enhance radiosensitivity through modulating Cyclin D1/E1-pRb-E2F1 pathway. To identify the expression profile of miRNAs in CaP cells exposed to IR, we performed human miRNA probe hybridization chip analysis and miR-16-5p was found to be significantly overexpressed in all treatment groups that irradiated with different doses of X-rays and heavy ions (12 C6+ ). Furthermore, overexpression of miR-16-5p suppressed cell proliferation, reduced cell viability, and induced cell cycle arrest at G0/G1 phase, resulting in enhanced radiosensitivity in LNCaP cells. Additionally, miR-16-5p specifically targeted the Cyclin D1/E1-3'-UTR in LNCaP cells and affected the expression of Cyclin D1/E1 in both mRNA and protein levels. Taken together, miR-16-5p enhanced radiosensitivity of CaP cells, the mechanism may be through modulating Cyclin D1/Cyclin E1/pRb/E2F1 pathway to cause cell cycle arrest at G0/G1 phase. These findings provided new insight into the correlation between miR-16-5p, cell cycle arrest, and radiosensitivity in CaP, revealed a previously unrecognized function of miR-16-5p-Cyclin D1/E1-pRb-E2F1 regulation in response to IR and may offer an alternative therapy to improve the efficiency of conventional radiotherapy.


Asunto(s)
Regulación Neoplásica de la Expresión Génica/genética , MicroARNs/metabolismo , Neoplasias de la Próstata/genética , Tolerancia a Radiación/genética , Puntos de Control del Ciclo Celular/genética , Línea Celular Tumoral , Ciclina D1/genética , Ciclina D1/metabolismo , Ciclina E/genética , Ciclina E/metabolismo , Factor de Transcripción E2F1/genética , Factor de Transcripción E2F1/metabolismo , Humanos , Masculino , MicroARNs/genética , Proteínas Oncogénicas/genética , Proteínas Oncogénicas/metabolismo , Neoplasias de la Próstata/metabolismo , Proteína de Retinoblastoma/genética , Proteína de Retinoblastoma/metabolismo , Transducción de Señal/genética
17.
Plant J ; 92(4): 736-743, 2017 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-28985004

RESUMEN

Ubiquitin-mediated protein degradation plays an essential role in plant growth and development as well as responses to environmental and endogenous signals. F-box protein is one of the key components of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which recruit specific substrate proteins for subsequent ubiquitination and 26S proteasome-mediated degradation to regulate developmental processes and signaling networks. However, it is not easy to obtain purified F-box proteins with high activity due to their unstable protein structures. Here, we found that Arabidopsis SKP-like proteins (ASKs) can significantly improve soluble expression of F-box proteins and maintain their bioactivity. We established an efficient ASK-assisted method to express and purify plant F-box proteins. The method meets a broad range of criteria required for the biochemical analysis or protein crystallization of plant F-box proteins.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/genética , Proteínas F-Box/metabolismo , Animales , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/aislamiento & purificación , Línea Celular , Proteínas F-Box/genética , Proteínas F-Box/aislamiento & purificación , Expresión Génica , Insectos , Proteolisis , Proteoma , Ubiquitinación
18.
J Cell Physiol ; 234(1): 940-949, 2018 01.
Artículo en Inglés | MEDLINE | ID: mdl-30144054

RESUMEN

Studies have demonstrated that zebrafish are powerful tools for monitoring environmental toxicity, including radiation hazard. Here we investigated the developmental toxicity of ionizing radiation (IR) in an in vivo embryonic zebrafish model. The effects of heavy ion (12 C6+ ), proton, and X-ray radiation on early zebrafish embryos were determined. A similar dose-dependent decrease in the hatch and survival rate of zebrafish embryos was observed after exposure to these irradiations. Exposure of zebrafish embryos to 1-4 Gy IR caused significant loss of pigmentation. Quantitative real-time reverse transcription polymerase chain reaction, western blot analysis, and in situ hybridization (ISH) experiment revealed that atp5α1 was markedly upregulated in irradiated zebrafish embryos. In addition, IR resulted in a rapid decrease in total adenosine triphosphate (ATP) generation. With dual functions of synthesizing or hydrolyzing ATP, ATP synthase regulated H+ transport crossing the mitochondrial inner. Administration of the mitochondrial ATP synthase inhibitor, oligomycin, partially restored pigmentation in irradiated zebrafish embryos, but the ATPase inhibitor, BTB06584, had no effect. Taken together, these results showed that IR exposure downregulated zebrafish pigmentation through regulation of H+ ion transport in mitochondria.


Asunto(s)
Desarrollo Embrionario/efectos de la radiación , Pigmentación/efectos de la radiación , Exposición a la Radiación/efectos adversos , Pez Cebra/genética , Adenosina Trifosfatasas/antagonistas & inhibidores , Adenosina Trifosfatasas/genética , Animales , Clorobenzoatos/administración & dosificación , Daño del ADN/efectos de la radiación , Desarrollo Embrionario/genética , Regulación del Desarrollo de la Expresión Génica/efectos de la radiación , Hibridación in Situ , ATPasas de Translocación de Protón Mitocondriales/antagonistas & inhibidores , ATPasas de Translocación de Protón Mitocondriales/genética , Oligomicinas/administración & dosificación , Pigmentación/genética , Radiación Ionizante , Sulfonas/administración & dosificación , Pez Cebra/crecimiento & desarrollo
19.
J Cell Physiol ; 233(2): 1312-1320, 2018 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-28500630

RESUMEN

Deletion of p53, most common genetic alteration, is observed in human tumors and reported to lead to improve in cell radioresistance. Heavy-ion irradiation (IR) could induce p53-/- cancer cells apoptosis. However, little is known regarding the molecular mechanism in this type of cell apoptosis. The present studies have focused on mechanisms state of signaling pathways as an activator of the cell fate decisions induced by heavy ion IR without p53. Carbon ion IR could induce up-regulation of E2F1 expression in cancer cells. This phenomenon was not observed in X-ray IR group. Up-regulation of E2F1 could cause a higher reduction in clonogenic survival, low level of cellular activity, G2 /M phase arrest, promotion of apoptosis rate, up-regulation of phosphor-Rb, Bax, and cleaved-caspase 3 proteins expressions without p53. Changes of E2F1 expressions could partly alter radioresistance in cancer cells. The results were suggested that heavy ion IR could induce p53-/- cancer cells apoptosis via E2F1 signal pathway. Our study provides a scientific rationale for the clinical use of heavy ion as radiotherapy in patients with p53-deficient tumors, which are often resistant to radiotherapy.


Asunto(s)
Apoptosis/efectos de la radiación , Carcinoma Hepatocelular/tratamiento farmacológico , Caspasa 3/metabolismo , Factor de Transcripción E2F1/metabolismo , Radioterapia de Iones Pesados , Neoplasias Hepáticas/radioterapia , Tolerancia a Radiación , Proteína X Asociada a bcl-2/metabolismo , Células A549 , Carcinoma Hepatocelular/enzimología , Carcinoma Hepatocelular/genética , Carcinoma Hepatocelular/patología , Relación Dosis-Respuesta en la Radiación , Factor de Transcripción E2F1/genética , Puntos de Control de la Fase G2 del Ciclo Celular/efectos de la radiación , Regulación Neoplásica de la Expresión Génica , Células Hep G2 , Humanos , Neoplasias Hepáticas/enzimología , Neoplasias Hepáticas/genética , Neoplasias Hepáticas/patología , Transducción de Señal/efectos de la radiación , Proteína p53 Supresora de Tumor/genética , Proteína p53 Supresora de Tumor/metabolismo , Regulación hacia Arriba
20.
Phys Chem Chem Phys ; 20(15): 9904-9909, 2018 Apr 18.
Artículo en Inglés | MEDLINE | ID: mdl-29619448

RESUMEN

Heavy metal/ferromagnetic layers with perpendicular magnetic anisotropy (PMA) have potential applications for high-density information storage in racetrack memories and nonvolatile magnetic random access memories. In these devices, deterministic magnetization switching has been achieved via electric current induced spin orbital torques (SOTs) with the assistance of a current directional external in-plane bias field, which causes technological obstacles for the real application of SOT based spintronic devices. Here, we report that reversible field-free magnetization switching could be achieved via current-driven domain wall motion (DWM) in Pt/Co/Cr micro-sized racetracks with PMA owing to the preformation of the homochiral Néel-type domain wall, in which an in-plane inherent Dzyaloshinskii-Moriya interaction field was generated acting as the external in-plane bias field to break the symmetry. A full magnetization switching can be realized in this device based on the enhanced SOTs from a dedicated design of Pt/Co/Cr structures with Pt and Cr showing opposite signs of spin Hall angles. Therefore, the generated spin currents are expected to work in concert to improve the SOTs. We also demonstrated that the simultaneously accompanying Joule heating effect also plays a key role in the field-free magnetization switching process, including the propagation field as well as the domain wall motion velocity.

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