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1.
Opt Express ; 31(5): 9123-9134, 2023 Feb 27.
Artículo en Inglés | MEDLINE | ID: mdl-36860011

RESUMEN

The susceptibility of Cs-based fluorides to deliquescence has led to the fact that lanthanide-doped Cs-based fluorides and their related applications have hardly been reported. Herein, the method to solve the deliquescence of Cs3ErF6 and its excellent temperature measurement performance were discussed in this work. Initially, the soaking experiment of Cs3ErF6 found that water had irreversible damage to the crystallinity of Cs3ErF6. Subsequently, the luminescent intensity was ensured by the successful isolation of Cs3ErF6 from the deliquescence of vapor by the silicon rubber sheet encapsulation at room temperature. In addition, we also removed moisture by heating samples to obtain temperature-dependent spectra. According to spectral results, two luminescent intensity ratio (LIR) temperature sensing modes were designed. The LIR mode which can quickly respond to temperature parameters by monitoring single band Stark level emission named as "rapid mode". The maximum sensitivity of 7.362%K-1 can be obtained in another "ultra-sensitive mode" thermometer based on the non-thermal coupling energy levels. This work will focus on the deliquescence effect of Cs3ErF6 and the feasibility of silicone rubber encapsulation. At the same time, a dual-mode LIR thermometer is designed for different situations.

2.
Acta Pharmacol Sin ; 44(11): 2243-2252, 2023 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-37407703

RESUMEN

Group 3 innate lymphoid cells (ILC3s) are mediators of intestinal immunity and barrier function. Recent studies have investigated the role of the mammalian target of rapamycin complex (mTOR) in ILC3s, whereas the mTORC1-related mechanisms and crosstalk between mTORC1 and mTORC2 involved in regulating ILC3 homeostasis remain unknown. In this study, we found that mTORC1 but not mTORC2 was critical in ILC3 development, IL-22 production, and ILC3-mediated intestinal homeostasis. Single-cell RNA sequencing revealed that mTORC1 deficiency led to disruption of ILC3 heterogeneity, showing an increase in differentiation into ILC1-like phenotypes. Mechanistically, mTORC1 deficiency decreased the expression of NFIL3, which is a critical transcription factor responsible for ILC3 development. The activities of both mTORC1 and mTORC2 were increased in wild-type ILC3s after activation by IL-23, whereas inhibition of mTORC1 by Raptor deletion or rapamycin treatment resulted in increased mTORC2 activity. Previous studies have demonstrated that S6K, the main downstream target of mTORC1, can directly phosphorylate Rictor to dampen mTORC2 activity. Our data found that inhibition of mTORC1 activity by rapamycin reduced Rictor phosphorylation in ILC3s. Reversing the increased mTORC2 activity via heterozygous or homozygous knockout of Rictor in Raptor-deleted ILC3s resulted in severe ILC3 loss and complete susceptibility to intestinal infection in mice with mTORC1 deficiency (100% mortality). Thus, mTORC1 acts as a rheostat of ILC3 heterogeneity, and mTORC2 protects ILC3s from severe loss of cells and immune activity against intestinal infection when mTORC1 activity is diminished.


Asunto(s)
Inmunidad Innata , Linfocitos , Ratones , Animales , Diana Mecanicista del Complejo 1 de la Rapamicina/metabolismo , Diana Mecanicista del Complejo 2 de la Rapamicina/metabolismo , Proteína Asociada al mTOR Insensible a la Rapamicina/metabolismo , Proteína Reguladora Asociada a mTOR/genética , Factores de Transcripción/metabolismo , Sirolimus/farmacología , Mamíferos/metabolismo
3.
Mol Ecol ; 30(18): 4448-4465, 2021 09.
Artículo en Inglés | MEDLINE | ID: mdl-34217151

RESUMEN

Human induced environmental change may require rapid adaptation of plant populations and crops, but the genomic basis of environmental adaptation remain poorly understood. We analysed polymorphic loci from the perennial crop Medicago sativa (alfalfa or lucerne) and the annual legume model species M. truncatula to search for a common set of candidate genes that might contribute to adaptation to abiotic stress in both annual and perennial Medicago species. We identified a set of candidate genes of adaptation associated with environmental gradients along the distribution of the two Medicago species. Candidate genes for each species were detected in homologous genomic linkage blocks using genome-environment (GEA) and genome-phenotype association analyses. Hundreds of GEA candidate genes were species-specific, of these, 13.4% (M. sativa) and 24% (M. truncatula) were also significantly associated with phenotypic traits. A set of 168 GEA candidates were shared by both species, which was 25.4% more than expected by chance. When combined, they explained a high proportion of variance for certain phenotypic traits associated with adaptation. Genes with highly conserved functions dominated among the shared candidates and were enriched in gene ontology terms that have shown to play a central role in drought avoidance and tolerance mechanisms by means of cellular shape modifications and other functions associated with cell homeostasis. Our results point to the existence of a molecular basis of adaptation to abiotic stress in Medicago determined by highly conserved genes and gene functions. We discuss these results in light of the recently proposed omnigenic model of complex traits.


Asunto(s)
Medicago truncatula , Medicago , Aclimatación , Adaptación Fisiológica/genética , Humanos , Medicago/genética , Medicago sativa/genética , Medicago truncatula/genética , Suelo
4.
Inorg Chem ; 60(24): 19440-19447, 2021 Dec 20.
Artículo en Inglés | MEDLINE | ID: mdl-34874152

RESUMEN

On account of the strong oxidizing property of the europium(III) ion, its charge transfer band (CTB) can be easily formed in many inorganic compounds. In this work, the Eu3+ ions were singly doped into the K3LuSi2O7 compound with a hexagonal structure, and two kinds of Eu3+-O2- CTBs were detected by monitoring at specific wavelengths. The qualitative analysis of Eu3+ ion site occupation was illuminated by combining Eu3+-O2- CTBs with the corresponding cell volume. Furthermore, the two kinds of Eu3+ sites are eventually assigned to the K(2) and Lu sites, which means that Eu3+ ions selectively occupy the site with a low coordination number, according to the calculated CT energy by the dielectric theory of complex crystals and the magnitude of CT energy in the excitation spectra. Meanwhile, at high temperatures, the CTB does not show the traditional thermal quenching like f-f transitions but demonstrates thermal enhancement; thus, by using this opposite variation in excitation spectra, a noninvasive optical thermometer is presented, and this opposite variation tendency is thought to be the difference of thermal stability of disparate excited energy states. When new luminescent phosphors are designed with interesting spectral properties, this work will give us an alternative approach to determine the site occupation preference of Eu3+, especially when there are more than two different sites in the compound.

5.
BMC Gastroenterol ; 21(1): 54, 2021 Feb 06.
Artículo en Inglés | MEDLINE | ID: mdl-33549047

RESUMEN

BACKGROUND: Small intestinal bacterial overgrowth (SIBO) is characterized by the condition that bacteria overgrowth in the small intestine. Fecal microbiota transplantation (FMT) has been applied as an effective tool for reestablishing the structure of gut microbiota. However, whether FMT could be applied as a routine SIBO treatment has not been investigated. METHODS: In this trial, 55 SIBO patients were enrolled. All participants were randomized in two groups, and were given FMT capsule or placebo capsules once a week for 4 consecutive weeks. Measurements including the lactulose hydrogen breath test gastrointestinal symptoms, as well as fecal microbiota diversity were assessed before and after FMT therapy. RESULTS: Gastrointestinal symptoms significantly improved in SIBO patients after treatment with FMT compared to participants in placebo group. The gut microbiota diversity of FMT group had a significant increase, while placebo group showed none. CONCLUSIONS: This study suggests that applying FMT for patients with SIBO can alleviate gastrointestinal symptoms, indicating that FMT may be a promising and novel therapeutic regimen for SIBO. Trial registry This study was retrospectively registered with the Chinese Clinical Trial registry on 2019.7.10 (ID: ChiCTR1900024409, http://www.chictr.org.cn ).


Asunto(s)
Infecciones Bacterianas , Microbioma Gastrointestinal , Trasplante de Microbiota Fecal , Humanos , Lactulosa , Resultado del Tratamiento
6.
Nucleic Acids Res ; 46(3): 1038-1051, 2018 02 16.
Artículo en Inglés | MEDLINE | ID: mdl-29272451

RESUMEN

Nonsense-mediated mRNA decay (NMD) is a highly conserved post-transcriptional regulatory mechanism of gene expression in eukaryotes. Originally, NMD was identified as an RNA surveillance machinery in degrading 'aberrant' mRNA species with premature termination codons. Recent studies indicate that NMD regulates the stability of natural gene transcripts that play significant roles in cell functions. Although components and action modes of the NMD machinery in degrading its RNA targets have been extensively studied with biochemical and structural approaches, the biological roles of NMD remain to be defined. Stem cells are rare cell populations, which play essential roles in tissue homeostasis and hold great promises in regenerative medicine. Stem cells self-renew to maintain the cellular identity and differentiate into somatic lineages with specialized functions to sustain tissue integrity. Transcriptional regulations and epigenetic modulations have been extensively implicated in stem cell biology. However, post-transcriptional regulatory mechanisms, such as NMD, in stem cell regulation are largely unknown. In this paper, we summarize the recent findings on biological roles of NMD factors in embryonic and tissue-specific stem cells. Furthermore, we discuss the possible mechanisms of NMD in regulating stem cell fates.


Asunto(s)
Células Madre Embrionarias Humanas/metabolismo , Degradación de ARNm Mediada por Codón sin Sentido , Fosfatidilinositol 3-Quinasas/genética , ARN Helicasas/genética , Investigación con Células Madre , Células Madre Adultas/citología , Células Madre Adultas/metabolismo , Diferenciación Celular , Proliferación Celular , Codón sin Sentido , Células Madre Hematopoyéticas/citología , Células Madre Hematopoyéticas/metabolismo , Células Madre Embrionarias Humanas/citología , Humanos , Isoenzimas/genética , Isoenzimas/metabolismo , Células-Madre Neurales/citología , Células-Madre Neurales/metabolismo , Fosfatidilinositol 3-Quinasas/metabolismo , ARN Helicasas/metabolismo , Transactivadores/genética , Transactivadores/metabolismo
7.
Adv Exp Med Biol ; 1207: 529-556, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32671773

RESUMEN

Normal gastrointestinal physiology is fundamental for all the living beings. Gastrointestinal diseases mainly include gastrointestinal motility disorders, infectious inflammation (such as Helicobacter pylori infection, cholera, and intestinal parasites), non-infectious inflammation (such as chronic gastritis and Crohn's disease), and gastrointestinal cancers. In addition, intestinal microbial disorder is also an important cause of intestinal diseases, so intestinal microecological treatment (fecal microbiota transplantation) is an important mean of treating gastrointestinal diseases. In recent years, the role of autophagy in gastrointestinal diseases has been studied extensively. Autophagy is observed under various pathological processes of the gastrointestinal tract. For example, it has been demonstrated that autophagy plays an important role in maintaining the homeostasis and integrity of intestinal epithelium. Additionally, autophagy regulates host response to H. pylori infection and development of gastrointestinal cancers. Therefore, we will discuss pivotal roles of autophagy in various gastrointestinal diseases and analyze the underlying molecular mechanisms, which may provide new therapeutic targets applicable for the treatment of gastrointestinal diseases.


Asunto(s)
Autofagia , Enfermedades Gastrointestinales , Autofagia/efectos de los fármacos , Cólera , Enfermedad de Crohn , Gastritis Atrófica , Enfermedades Gastrointestinales/tratamiento farmacológico , Neoplasias Gastrointestinales , Infecciones por Helicobacter , Humanos
8.
Chaos ; 30(1): 013126, 2020 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-32013481

RESUMEN

Networks of coupled systems may exhibit a form of incomplete synchronization called partial synchronization or cluster synchronization, which refers to the situation where only some, but not all, systems exhibit synchronous behavior. Moreover, due to perturbations or uncertainties in the network, exact partial synchronization in the sense that the states of the systems within each cluster become identical, cannot be achieved. Instead, an approximate synchronization may be observed, where the states of the systems within each cluster converge up to some bound, and this bound tends to zero if (the size of) the perturbations tends to zero. In order to derive sufficient conditions for this robustified notion of synchronization, which we refer to as practical partial synchronization, first, we separate the synchronization error dynamics from the network dynamics and interpret them in terms of a nonautonomous system of delay differential equations with a bounded additive perturbation. Second, by assessing the practical stability of this error system, conditions for practical partial synchronization are derived and formulated in terms of linear matrix inequalities. In addition, an explicit relation between the size of perturbation and the bound of the synchronization error is provided.

9.
Am J Bot ; 106(9): 1219-1228, 2019 09.
Artículo en Inglés | MEDLINE | ID: mdl-31535720

RESUMEN

PREMISE: Although hybridization has played an important role in the evolution of many plant species, phylogenetic reconstructions that include hybridizing lineages have been historically constrained by the available models and data. Restriction-site-associated DNA sequencing (RADseq) has been a popular sequencing technique for the reconstruction of hybridization in the next-generation sequencing era. However, the utility of RADseq for the reconstruction of complex evolutionary networks has not been thoroughly investigated. Conflicting phylogenetic relationships in the genus Medicago have been mainly attributed to hybridization, but the specific hybrid origins of taxa have not been yet clarified. METHODS: We obtained new molecular data from diploid species of Medicago section Medicago using single-digest RADseq to reconstruct evolutionary networks from gene trees, an approach that is computationally tractable with data sets that include several species and complex hybridization patterns. RESULTS: Our analyses revealed that assembly filters to exclusively select a small set of loci with high phylogenetic information led to the most-divergent network topologies. Conversely, alternative clustering thresholds or filters on the number of samples per locus had a lower impact on networks. A strong hybridization signal was detected for M. carstiensis and M. cretacea, while signals were less clear for M. rugosa, M. rhodopea, M. suffruticosa, M. marina, M. scutellata, and M. sativa. CONCLUSIONS: Complex network reconstructions from RADseq gene trees were not robust under variations of the assembly parameters and filters. But when the most-divergent networks were discarded, all remaining analyses consistently supported a hybrid origin for M. carstiensis and M. cretacea.


Asunto(s)
Secuenciación de Nucleótidos de Alto Rendimiento , Medicago , Secuencia de Bases , Filogenia , Análisis de Secuencia de ADN
10.
Scand J Gastroenterol ; 54(12): 1419-1425, 2019 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-31765575

RESUMEN

Objective: Diarrhea-predominant irritable bowel syndrome (IBS-D) is the main subtype of IBS, a chronic functional gastrointestinal disorder. Small intestinal bacterial overgrowth (SIBO), which is characterized by dysbiosis of the bowel, causes gastrointestinal symptoms quite similar to IBS-D. However, whether SIBO correlates with IBS-D and its further mechanism remain unknown.Materials and Methods: The study included 60 IBS-D patients that fulfilled Rome IV criteria and 60 healthy controls. All subjects were undergoing a lactose breath test (LBT) to diagnose SIBO. IBS-D patients were further assigned to negative SIBO (SIBO-) subgroup and positive SIBO (SIBO+) subgroup to analyze the scores of symptoms and differences in the fecal microbiota.Results: The prevalence of SIBO in IBS-D patients was higher than that in healthy controls (51.7% vs. 16.7%, p ≤ .001). In addition, IBS-SSS in SIBO+ subgroup was significantly higher than SIBO- subgroup (p = .015). The 16S rRNA analyses showed that composition and abundance of fecal microbiota were obviously different between the two subgroups. There was a remarkable increase in Prevotella in IBS-D patients, especially in IBS-D SIBO+ sufferers. Meanwhile, there were a moderately positive correlation of the abundance of Prevotella (rho = 0.458, p ≤ .001) with IBS-SSS.Conclusion: SIBO is associated with IBS-D, which may be related to alteration in the intestinal microbiota. These findings suggest the potent role of Prevotella in gastrointestinal symptoms between SIBO and IBS-D, thus provide a novel insight into the connection between SIBO and IBS-D.


Asunto(s)
Infecciones por Bacteroidaceae , Diarrea/microbiología , Intestino Delgado/microbiología , Síndrome del Colon Irritable , Prevotella/aislamiento & purificación , Adulto , Infecciones por Bacteroidaceae/diagnóstico , Infecciones por Bacteroidaceae/epidemiología , Infecciones por Bacteroidaceae/fisiopatología , Pruebas Respiratorias/métodos , China/epidemiología , Correlación de Datos , Disbiosis/microbiología , Disbiosis/fisiopatología , Heces/microbiología , Femenino , Humanos , Síndrome del Colon Irritable/diagnóstico , Síndrome del Colon Irritable/epidemiología , Síndrome del Colon Irritable/microbiología , Síndrome del Colon Irritable/fisiopatología , Masculino , Prevalencia
12.
Crit Care ; 20(1): 332, 2016 Oct 18.
Artículo en Inglés | MEDLINE | ID: mdl-27751177

RESUMEN

BACKGROUND: The dysbiosis of intestinal microbiota plays an important role in the development of gut-derived infections, making it a potential therapeutic target against multiple organ dysfunction syndrome (MODS) after sepsis. However, the effectiveness of fecal microbiota transplantation (FMT) in treating this disease has been rarely investigated. METHODS: Two male patients, a 65-year-old and an 84-year-old, were initially diagnosed with cerebellar hemorrhage and cerebral infarction, respectively, after admission. During the course of hospitalization, both patients developed MODS, septic shock, and severe watery diarrhea. Demographic and clinical data were collected. Intestinal dysbiosis was confirmed by 16S rDNA-based molecular analysis of microbiota composition in fecal samples from the two patients. The two patients each received a single nasogastric infusion of sterile-filtered, pathogen-free feces from a healthy donor. Fecal samples were collected every two days post infusion to monitor changes in microbiota composition in response to treatment. RESULTS: Following FMT, MODS and severe diarrhea were alleviated in both patients. Their stool output and body temperature markedly declined and normalized. Significant modification of microbiota composition, characterized by a profound increase of commensals in the Firmicutes phylum and depletion of opportunistic organisms in the Proteobacteria phylum, was observed in both patients. Furthermore, we identified a reconstituted bacterial community enriched in Firmicutes and depleted of Proteobacteria that was associated with a decrease in the patients' fecal output and in the levels of plasma inflammation markers. CONCLUSIONS: The outcome of treating two patients with FMT indicates that restoration of the intestinal microbiota barrier can alleviate the infection and modulate the immune response. These findings warrant further investigation of FMT as a putative new therapy for treating microbiota-related diseases such as MODS.


Asunto(s)
Trasplante de Microbiota Fecal/métodos , Microbioma Gastrointestinal/fisiología , Insuficiencia Multiorgánica/terapia , Sepsis/complicaciones , Anciano , Anciano de 80 o más Años , Diarrea/etiología , Diarrea/terapia , Disbiosis/terapia , Trasplante de Microbiota Fecal/normas , Humanos , Masculino , Insuficiencia Multiorgánica/etiología , ARN Ribosómico 16S/farmacología , ARN Ribosómico 16S/uso terapéutico , Resultado del Tratamiento
13.
Hepatol Res ; 46(9): 862-70, 2016 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-26763834

RESUMEN

AIM: Non-alcoholic fatty liver disease (NAFLD)-related advanced hepatic fibrosis is associated with liver and cardiovascular morbidity and mortality. This study aims to compare the FIB-4 index, NAFLD fibrosis score (NFS) and BARD score for prediction of advanced liver fibrosis. METHODS: Pooled sensitivity, specificity, diagnostic odds ratio (DOR), summary receiver-operator curves (SROC) and Spearman's rank correlation coefficient were used to examine the accuracy of each non-invasive scoring system for predicting NAFLD-related advanced fibrosis. RESULTS: Four studies with 1038 adult patients were included in this meta-analysis. A total of 135 patients (13.0%) had advanced fibrosis. In the FIB-4 index group, pooled sensitivity and specificity with 95% confidence interval (CI), and the area under the ROC (AUROC) were 0.844 (0.772-0.901), 0.685 (0.654-0.716) and 0.8496 ± 0.0680, respectively, at a cut-off of 1.30. At a threshold of 3.25, the same parameters were 0.38 (0.30-0.47), 0.96 (0.95-0.98) and 0.8445 ± 0.0981. At a cut-off of -1.455, values were 0.77 (0.69-0.84), 0.70 (0.67-0.73) and 0.8355 ± 0.0667, respectively. At a 0.676 cut-off, pooled sensitivity and specificity with 95% CI were 0.27 (0.19-0.35) and 0.98 (0.96-0.98), respectively; and the AUROC was 0.647 ± 0.2208. In the BARD score group, pooled sensitivity and specificity with 95% CI were 0.74 (0.66-0.81) and 0.66 (0.63-0.69), respectively; and the AUROC was 0.7625 ± 0.0285. CONCLUSION: FIB-4 index with a 1.30 cut-off has better diagnostic accuracy than the FIB-4 index with a 3.25 cut-off, NFS and BARD score, despite showing its limited value for predicting NAFLD-related advanced fibrosis.

14.
J Nanosci Nanotechnol ; 16(3): 3150-6, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-27455776

RESUMEN

KY(MoO4)2 microcrystals with different morphologies, including rhombic, sheet-like, rectangular plate-like, and hexagon plate-like, have been successfully synthesized via a simple hydrothermal method without using any templates, surfactant, or other organic additives by varying the molar ratios of Y(NO3)3/K2MoO4 and pH values of the resultant solutions. X-ray diffraction (XRD), field emission-scanning electron microscopy (FE-SEM), photoluminescence (PL), and photoluminescent excitation spectra (PLE) were employed to characterize the samples. Furthermore, a systematic study on the photoluminescence of Eu3+ doped KY(MoO4)2 samples has been explored by varying experimental conditions. The strongest red emission can be observed clearly at 616 nm. And by controlling the doping concentration of Eu3+ in KY(MoO4)2 solutions, it can be seen that the concentration quenching occurs at 25 at.% for Eu3+. These results suggest that the well-crystallized KY(MoO4)2:Eu3+ microcrystals synthesized in our experiment can be used as a red component for white light emitting diodes (W-LEDs).


Asunto(s)
Europio/química , Molibdeno/química , Luminiscencia , Microscopía Electrónica de Rastreo , Óxidos/química , Difracción de Rayos X
15.
Artículo en Zh | MEDLINE | ID: mdl-30124035

RESUMEN

Objective: To characterize the structure of insulin receptor of Taenia solium(TsIR-1316) and express its ligand binding domain (LBD). Methods: Primers for TsIR-1316 were designed according to the genomic data of T. solium, and the TsIR-1316 gene was amplified by PCR. The nucleotide and amino acid sequences of TsIR-1316 were aligned using BLASTN and BLASTP, and the putative signal peptide and structure domains were predicted. The LBD fragment of TsIR-1316 was cloned into the pET-30a(+) vector and expressed. The expressed proteins were purified, separated by SDS-PAGE and analyzed with Western blotting using cysticercus cellulosae-positive serum and TsIR-LBD-immunized rabbit serum. Results: The open reading frame of TsIR-1316 was 5 196 bp, encoded a protein of 1 732 amino acids which had a typical conserved domain of tyrosine kinase family, was 84% homologous with Echinococcus multilocularis, and had a "V"-shaped tertiary structure. As expected, SDS-PAGE showed that the expressed protein had a band at Mr 59 000. Western blotting showed that the recombinant protein had specific reactions with cysticercus cellulosae positive serum and TsIR-LBD immunized rabbit serum, resulting in a specific band at M(r) 59 000. Conclusion: The TsIR-1316 gene was successfully cloned and identified. The expressed protein of TsIR-1316 LBD can be recognized by cysticercus cellulosae positive serum, which suggests a good antigenicity of this protein.


Asunto(s)
Taenia solium , Secuencia de Aminoácidos , Animales , Western Blotting , Clonación Molecular , Sueros Inmunes , Reacción en Cadena de la Polimerasa , Conejos , Receptor de Insulina , Proteínas Recombinantes , Taenia
16.
Artículo en Zh | MEDLINE | ID: mdl-30148293

RESUMEN

Objective: To identify and express serpin B6 of Taenia solium (Tsserpin B6) and explore its possible use as a diagnostic antigen. Methods: Primers for Tsserpin B6 were designed according to T. solium genome and transcriptome data. The Tsserpin B6 gene was amplified from the total RNA of T. solium cysticercus and subsequently analyzed by bioinformatics. Multiple amino acid sequence alignments of Tsserpin B6 and other parasites serpins were created using the Clustal X1.83. Phylogenetic analyses were performed using the MEGA 6.0. The recombinant expression vector pET-30a-Tsserpin B6 was constructed and expressed in E. coli strain BL21 (DE3). The expressed proteins were purified, isolated by SDS-PAGE, and analyzed by Western blotting using pig serum infected with T. solium cysticerci. Results: The complete reading frame of Tsserpin B6 was 1 131 bp and encoded a protein of 376 amino acids. The encoded protein had a conservative reactive center loop and distinctive domains of NEEGAE and FTVDHPFLF, and harbored 9 potential linear B cell epitopes. The expressed products of Tsserpin B6 mainly existed as an inclusion body, and reacted with pig serum infected with T. solium, resulting in a specific band at the Mr 53 000. Conclusion: The Tsserpin B6 gene was successfully cloned, and its expressed products can be recognized by pig serum infected with T. solium.


Asunto(s)
Taenia solium , Secuencia de Aminoácidos , Animales , Western Blotting , Cysticercus , Electroforesis en Gel de Poliacrilamida , Escherichia coli , Filogenia , Serpinas , Porcinos
17.
BMC Genomics ; 16: 1020, 2015 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-26626170

RESUMEN

BACKGROUND: Genomic selection based on genotyping-by-sequencing (GBS) data could accelerate alfalfa yield gains, if it displayed moderate ability to predict parent breeding values. Its interest would be enhanced by predicting ability also for germplasm/reference populations other than those for which it was defined. Predicting accuracy may be influenced by statistical models, SNP calling procedures and missing data imputation strategies. RESULTS: Landrace and variety material from two genetically-contrasting reference populations, i.e., 124 elite genotypes adapted to the Po Valley (sub-continental climate; PV population) and 154 genotypes adapted to Mediterranean-climate environments (Me population), were genotyped by GBS and phenotyped in separate environments for dry matter yield of their dense-planted half-sib progenies. Both populations showed no sub-population genetic structure. Predictive accuracy was higher by joint rather than separate SNP calling for the two data sets, and using random forest imputation of missing data. Highest accuracy was obtained using Support Vector Regression (SVR) for PV, and Ridge Regression BLUP and SVR for Me germplasm. Bayesian methods (Bayes A, Bayes B and Bayesian Lasso) tended to be less accurate. Random Forest Regression was the least accurate model. Accuracy attained about 0.35 for Me in the range of 0.30-0.50 missing data, and 0.32 for PV at 0.50 missing data, using at least 10,000 SNP markers. Cross-population predictions based on a smaller subset of common SNPs implied a relative loss of accuracy of about 25% for Me and 30% for PV. Genome-wide association analyses based on large subsets of M. truncatula-aligned markers revealed many SNPs with modest association with yield, and some genome areas hosting putative QTLs. A comparison of genomic vs. conventional selection for parent breeding value assuming 1-year vs. 5-year selection cycles, respectively, indicated over three-fold greater predicted yield gain per unit time for genomic selection. CONCLUSIONS: Genomic selection for alfalfa yield is promising, based on its moderate prediction accuracy, moderate value of cross-population predictions, and lack of sub-population structure. There is limited scope for searching individual QTLs with overwhelming effect on yield. Some of our results can contribute to better design of genomic selection experiments for alfalfa and other crops with similar mating systems.


Asunto(s)
Biomasa , Genética de Población , Genoma de Planta , Medicago sativa/genética , Selección Genética , Cruzamiento , Estudio de Asociación del Genoma Completo , Genotipo , Modelos Genéticos , Fenotipo , Polimorfismo de Nucleótido Simple , Sitios de Carácter Cuantitativo , Reproducibilidad de los Resultados
18.
Aging Male ; 18(4): 233-7, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26225795

RESUMEN

Few randomized studies have compared intermittent hormone therapy (IHT) with continuous hormone therapy (CHT) for the treatment of locally advanced prostate cancer (PCa). Here, we report the results of a meta-analysis of a randomized controlled trial, evaluating the effectiveness of IHT versus CHT for patients with locally advanced PCa. Types of intervention were IHT versus CHT. The primary endpoint of this study is overall mortality and the secondary endpoints are any progression of disease, quality of life (QOL) and adverse effects between two groups. Six randomized controlled trials totaling 2996 patients were included. Results are as follows: after hormone therapy, patients undergoing IHT demonstrated no significant difference from those undergoing CHT in terms of the overall mortality (OR = 1.0, 95% CI [0.86, 1.17]) and disease progression (OR = 1.16, 95% CI [0.86, 1.57]). Men treated with IHT also reported better QOL, fewer adverse effects and considerable economic benefit for the individual and the community. With no difference in overall mortality and incidence of progression, current clinical studies confirm that both therapeutic methods were safe and effective. However, our study also takes into account QOL. When these secondary measures are considered, IHT may be a better option over CHT as patients report a more affordable treatment with improved QOL and fewer adverse effects.


Asunto(s)
Terapia de Reemplazo de Hormonas/métodos , Neoplasias de la Próstata/tratamiento farmacológico , Testosterona/administración & dosificación , Esquema de Medicación , Humanos , Masculino , Neoplasias de la Próstata/patología , Calidad de Vida
19.
Cancer Sci ; 105(9): 1109-15, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-25040744

RESUMEN

We previously reported that hypoxia-induced MDR in gastric cancer (GC) cells is hypoxia-inducible factor-1 (HIF-1)-dependent. However, the exact mechanisms are still unknown. Our previous study revealed that Krüppel-like factor 8 (KLF8), a novel transcription factor, was associated with malignant phenotype in GC cells. KLF8 is overexpressed in clear cell renal carcinoma lacking von Hippel-Lindau protein function, which resulted in HIF-1 stabilization. Given this association, we hypothesized that KLF8 contributed to hypoxia-induced MDR in GC cells. Initial experiments revealed that hypoxia could increase KLF8 and HIF-1α expressions in GC cells, and KLF8 levels in GC drug-resistant cell lines were higher than in parental cell lines. Subsequent experiments showed that in normoxia, exogenous KLF8 could promote the MDR phenotype; however, blocking KLF8 expression could effectively reverse the MDR phenotype induced by hypoxia. Overexpressed KLF8 increased resistance-associated gene MDR1 mRNA levels, Bcl-2 and P-gp protein levels, and decreased Bax and caspase-3 protein levels in GC cells, and knockout KLF8 reversed these effects. Dual luciferase reporter and ChIP assays showed that KLF8 could promote MDR1 transcriptional activity by combining with KLF8 binding sites located in the upstream of MDR1 transcriptional start site. These results suggest that KLF8 is involved in hypoxia-induced MDR through inhibiting apoptosis and increasing the drug release rate by directly regulating MDR1 transcription.


Asunto(s)
Miembro 1 de la Subfamilia B de Casetes de Unión a ATP/genética , Resistencia a Múltiples Medicamentos , Resistencia a Antineoplásicos , Proteínas Represoras/fisiología , Subfamilia B de Transportador de Casetes de Unión a ATP , Miembro 1 de la Subfamilia B de Casetes de Unión a ATP/metabolismo , Antibióticos Antineoplásicos/farmacología , Apoptosis , Proteínas Reguladoras de la Apoptosis/genética , Proteínas Reguladoras de la Apoptosis/metabolismo , Hipoxia de la Célula , Línea Celular Tumoral , Doxorrubicina/farmacología , Regulación Neoplásica de la Expresión Génica , Humanos , Subunidad alfa del Factor 1 Inducible por Hipoxia/genética , Subunidad alfa del Factor 1 Inducible por Hipoxia/metabolismo , Factores de Transcripción de Tipo Kruppel , Neoplasias Gástricas , Transcripción Genética , Activación Transcripcional
20.
ACS Omega ; 9(5): 5371-5377, 2024 Feb 06.
Artículo en Inglés | MEDLINE | ID: mdl-38343936

RESUMEN

MicroRNAs (miRNAs) have been regarded as potential biomarkers in evaluating various diseases, such as pregnancy-induced hypertension and cancers. However, sensitive and reliable miRNA detection is still a challenge due to the low amplification efficiency and high background signal. Herein, we developed a colorimetric method for miRNA detection utilizing the self-priming-initiated color reaction loaded on a rolling circle amplification (RCA) product. In this method, a biotin-labeled RCA product is fixed on the surface of the streptavidin-coated wells, and the interfering components in samples are removed to avoid false reactions, thus reducing the background signals. Two signal amplification processes, including RCA and self-priming-initiated chain extension, endow the method with high sensitivity and a low limit of detection at the 10 fM level. In conclusion, our approach offers a promising perspective on sensitive and reliable miRNA detection and has the potential to be further utilized in biomedical research and early cancer detection.

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