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1.
Pulm Pharmacol Ther ; 70: 102019, 2021 10.
Artículo en Inglés | MEDLINE | ID: mdl-33771722

RESUMEN

BACKGROUND: QMF149 is an inhaled fixed-dose combination of indacaterol acetate and mometasone furoate (MF) delivered via Breezhaler®, under development for once-daily treatment of asthma. MF delivered via Twisthaler® is approved as Asmanex® Twisthaler® for the treatment of asthma. Bridging of MF delivered via Twisthaler® to MF delivered via Breezhaler® was undertaken as part of QMF149 development to enable dose comparisons between the devices. Pharmacokinetics (PK) of MF were characterized in two studies; a single dose PK study in healthy volunteers and a pharmacokinetic/pharmacodynamic (PK/PD) study in asthma patients. OBJECTIVES: The PK study in healthy volunteers evaluated the PK of single doses of MF via Breezhaler® (50-400 µg) and compared systemic exposure of MF following administration via Breezhaler® and Twisthaler® 400 µg (2 inhalations of 200 µg). The study in patients with asthma characterized the MF PK profile following once-daily inhalation of MF via Breezhaler® and Twisthaler® devices for 4 weeks. METHODS: In the open-label, single-dose, crossover study, healthy subjects sequentially received MF via Twisthaler® (400 µg, medium-dose inhaled corticosteroid [ICS]) and escalating doses via Breezhaler® (50, 100, 200, 400 µg). PK data were obtained up to 72 h post-dose. In the double-blind, double-dummy, parallel-group study, asthma patients were randomised to receive either MF 80 µg (low-dose ICS) or 320 µg (high-dose ICS) via Breezhaler®, or 200 µg (low-dose ICS) or 800 µg (2 inhalations of 400 µg; high-dose ICS) via Twisthaler® once daily for 4 weeks. PK sampling was performed on Days 1 and 28 at pre-dose and up to 24 h post-dose. RESULTS: In the healthy volunteer PK study, 20 healthy subjects completed all treatments. Dose-normalised AUClast of MF was 1.8-1.9-fold higher when delivered via Breezhaler® versus Twisthaler®. AUC and Cmax of MF increased in a dose-proportional manner over the range of 50-400 µg via Breezhaler®. Results from this study guided dose selection of MF via Breezhaler® for the asthma study. In the asthma study, in a subset of 96 patients, mean systemic exposure (AUClast and Cmax) for MF 80 and 320 µg via Breezhaler® was comparable with MF 200 and 800 µg via Twisthaler®, respectively, on Day 28. CONCLUSION: PK characterization in a healthy volunteer PK study and subsequently an asthma study enabled selection of 80 µg (low), 160 µg (medium), and 320 µg (high) delivered via Breezhaler® as MF doses comparable to the 200 µg, 400 µg and 800 µg doses delivered by Twisthaler®, respectively, as part of QMF149 formulation development.


Asunto(s)
Asma , Pregnadienodioles , Administración por Inhalación , Asma/tratamiento farmacológico , Estudios Cruzados , Método Doble Ciego , Inhaladores de Polvo Seco , Humanos , Furoato de Mometasona
2.
Sensors (Basel) ; 21(2)2021 Jan 07.
Artículo en Inglés | MEDLINE | ID: mdl-33430229

RESUMEN

Monitoring fluid flow rates is imperative for a variety of industries including biomedical engineering, chemical engineering, the food industry, and the oil and gas industries. We propose a flow meter that, unlike turbine or pressure-based sensors, is not flow intrusive, requires zero maintenance, has low risk of clogging, and is compatible with harsh conditions. Using optical fiber sensing, we monitor the temperature distribution along a fluid conduit. Pulsed heat injection locally elevates the fluid's temperature, and from the propagation velocity of the heat downstream, the fluid's velocity is determined. The method is experimentally validated for water and ethanol using optical frequency-domain reflectometry (OFDR) with millimetric spatial resolution over a 1.2 m-long conduit. Results demonstrate that such sensing yields accurate data with a linear response. By changing the optical fiber interrogation to time-domain distributed sensing approaches, the proposed technique can be scaled to cover sensing ranges of several tens of kilometers. On the other extreme, miniaturization for instance by using integrated optical waveguides could potentially bring this flow monitoring technique to microfluidic systems or open future avenues for novel "lab-in-a-fiber" technologies with biomedical applications.


Asunto(s)
Tecnología de Fibra Óptica , Calor , Fibras Ópticas , Temperatura
3.
Sensors (Basel) ; 21(3)2021 Jan 21.
Artículo en Inglés | MEDLINE | ID: mdl-33494419

RESUMEN

Distributed chemical sensing is demonstrated using standard acrylate coated optical fibers. Swelling of the polymer coating induces strain in the fiber's silica core provoking a local refractive index change which is detectable all along an optical fiber by advanced distributed sensing techniques. Thermal effects can be discriminated from strain using uncoated fiber segments, leading to more accurate strain readings. The concept has been validated by measuring strain responses of various aqueous and organic solvents and different chain length alkanes and blends thereof. Although demonstrated on a short range of two meters using optical frequency-domain reflectometry, the technique can be applied to many kilometer-long fiber installations. Low-cost and insensitive to corrosion and electromagnetic radiation, along with the possibility to interrogate thousands of independent measurement points along a single optical fiber, this novel technique is likely to find applications in environmental monitoring, food analysis, agriculture, water quality monitoring, or medical diagnostics.

4.
Pulm Pharmacol Ther ; 62: 101919, 2020 06.
Artículo en Inglés | MEDLINE | ID: mdl-32387408

RESUMEN

INTRODUCTION: Mometasone furoate (MF) is the inhaled corticosteroid (ICS) component in the long-acting ß2-agonist (LABA)/ICS fixed-dose combination of indacaterol/MF, delivered via Breezhaler®, in development for asthma. MF at low (80 µg) and high (320 µg) doses delivered via Breezhaler® is expected to be comparable to MF at low (200 µg) and high (800 µg) doses respectively, delivered via Twisthaler®. METHODS: This was a randomized, double-blind, double-dummy, four-week, parallel-group study of 739 adolescents and adults with persistent asthma. Eligible patients were receiving ICS treatment up to the maximum dose per day on a stable regimen for at least four weeks before screening. The study population was enriched for patients who were responsive to ICS therapy. The primary objective of the present study was to show non-inferiority of these doses, i.e. the low (80 µg) and high (320 µg) doses of MF delivered via Breezhaler® once daily, compared with the corresponding low (200 µg) and high (800 µg) doses of MF delivered via Twisthaler® once daily. The primary endpoint was 24 h post-dose trough forced expiratory volume in 1 s (FEV1), after four weeks of treatment in patients with asthma. A secondary objective was to evaluate the efficacy of MF 80 µg and 320 µg delivered via Breezhaler®, and MF 200 µg and 800 µg delivered via Twisthaler® in terms of Asthma Control Questionnaire-5 (ACQ-5) after one, two, three and four weeks of treatment. RESULTS: The LS mean difference in trough FEV1 after four weeks of treatment between MF low dose 80 µg (Breezhaler®) and MF low dose 200 µg (Twisthaler®) was 27 mL (95% CI -34, 89); for MF high dose 320 µg (Breezhaler®) and MF high dose 800 µg (Twisthaler®) the difference was 0 mL (95% CI -60, 61). These differences were neither clinically nor statistically significant. All treatment arms provided similar clinically relevant improvements in ACQ-5 after four weeks of treatment compared with baseline. Both treatments showed a similar safety profile with a low incidence of adverse events. CONCLUSION: The similarities in effects on lung function and ACQ after four weeks of treatment demonstrate the comparability of MF at low (80 µg) and high (320 µg) doses delivered with Breezhaler® with MF at low (200 µg) and high (800 µg) doses delivered with Twisthaler®, respectively. The study formally demonstrated that MF, delivered via Breezhaler®, is non-inferior to MF, delivered via Twisthaler® at corresponding ICS doses.


Asunto(s)
Antiasmáticos/administración & dosificación , Antiasmáticos/uso terapéutico , Asma/tratamiento farmacológico , Furoato de Mometasona/administración & dosificación , Furoato de Mometasona/uso terapéutico , Administración por Inhalación , Adolescente , Corticoesteroides/uso terapéutico , Adulto , Anciano , Anciano de 80 o más Años , Antiasmáticos/efectos adversos , Método Doble Ciego , Combinación de Medicamentos , Femenino , Humanos , Pulmón/efectos de los fármacos , Masculino , Persona de Mediana Edad , Furoato de Mometasona/efectos adversos , Distribución Aleatoria , Resultado del Tratamiento , Adulto Joven
5.
Sensors (Basel) ; 21(1)2020 Dec 30.
Artículo en Inglés | MEDLINE | ID: mdl-33396597

RESUMEN

A high-order polynomial fitting method is proposed to accelerate the computation of double-Gaussian fitting in the retrieval of the Brillouin frequency shifts (BFS) in optical fibers showing two local Brillouin peaks. The method is experimentally validated in a distributed Brillouin sensor under different signal-to noise ratios and realistic spectral scenarios. Results verify that a sixth-order polynomial fitting can provide a reliable initial estimation of the dual local BFS values, which can be subsequently used as initial parameters of a nonlinear double-Gaussian fitting. The method demonstrates a 4.9-fold reduction in the number of iterations required by double-Gaussian fitting and a 3.4-fold improvement in processing time.

6.
Sensors (Basel) ; 19(19)2019 Sep 25.
Artículo en Inglés | MEDLINE | ID: mdl-31557845

RESUMEN

We developed a novel method to monitor mass flow based on distributed fiber optical temperature sensing. Examination of the temporal and spatial temperature distribution along the entire length of a locally heated fluidic conduit reveals heat flow under forced convection. Our experimental results are in good agreement with two-dimensional finite element analysis that couples fluid dynamic and heat transfer equations. Through analysis of the temperature distribution bidirectional flow rates can be measured over three orders of magnitude. The technique is not flow intrusive, works in harsh conditions, including high-temperatures, high pressures, corrosive media, and strong electromagnetic environments. We demonstrate a first experimental implementation on a short fluidic system with a length of one meter. This range covers many applications such as low volume drug delivery, diagnostics, as well as process and automation technology. Yet, the technique can, without restrictions, be applied to long range installations. Existing fiber optics infrastructures, for instance on oil pipelines or down hole installations, would only require the addition of a heat source to enable reliable flow monitoring capability.

7.
Appl Microbiol Biotechnol ; 102(12): 5265-5278, 2018 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-29696334

RESUMEN

Cowpea N2 fixation and yield can be enhanced by selecting competitive and efficient indigenous rhizobia. Strains from contrasting agro-ecologies of Kilifi and Mbeere (Kenya) were screened. Two pot experiments were established consisting of 13 Bradyrhizobium strains; experiment 1 (11 Mbeere + CBA + BK1 from Burkina Faso), experiment 2 (12 Kilifi + CBA). Symbiotic effectiveness was assessed (shoot biomass, SPAD index and N uptake). Nodule occupancy of 13 simultaneously co-inoculated strains in each experiment was analyzed by matrix-assisted laser desorption/ionization time of flight (MALDI-TOF) mass spectrometry (MS) to assess competitiveness. Strains varied in effectiveness and competitiveness. The four most efficient strains were further evaluated in a field trial in Mbeere during the 2014 short rains. Strains from bacteroids of cowpea nodules from pot and field experiments were accurately identified as Bradyrhizobium by MALDI-TOF based on the SARAMIS™ database. In the field, abundant indigenous populations 7.10 × 103 rhizobia g-1 soil, outcompeted introduced strains. As revealed by MALDI-TOF, indigenous strains clustered into six distinct groups (I, II, III, IV, V and VI), group III were most abundant occupying 80% of nodules analyzed. MALDI-TOF was rapid, affordable and reliable to identify Bradyrhizobium strains directly from nodule suspensions in competition pot assays and in the field with abundant indigenous strains thus, its suitability for future competition assays. Evaluating strain competitiveness and then symbiotic efficacy is proposed in bioprospecting for potential cowpea inoculant strains.


Asunto(s)
Bradyrhizobium/química , Bradyrhizobium/fisiología , Técnicas Microbiológicas/instrumentación , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Vigna/microbiología , Bradyrhizobium/clasificación , Kenia , Nódulos de las Raíces de las Plantas/microbiología
8.
Agric Ecosyst Environ ; 261: 161-171, 2018 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-29970945

RESUMEN

Cowpea (Vigna unguiculata L. Walp.) is an important African food legume suitable for dry regions. It is the main legume in two contrasting agro-ecological regions of Kenya as an important component of crop rotations because of its relative tolerance to unpredictable drought events. This study was carried out in an effort to establish a collection of bacterial root nodule symbionts and determine their relationship to physicochemical soil parameters as well as any geographical distributional patterns. Bradyrhizobium spp. were found to be widespread in this study and several different types could be identified at each site. Unique but rare symbionts were recovered from the nodules of plants sampled in a drier in-land region, where there were also overall more different bradyrhizobia found. Plants raised in soil from uncultivated sites with a natural vegetation cover tended to also associate with more different bradyrizobia. The occurrence and abundance of different bradyrhizobia correlated with differences in soil texture and pH, but did neither with the agro-ecological origin, nor the origin from cultivated (n = 15) or uncultivated (n = 5) sites. The analytical method, protein profiling of isolated strains by Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS), provided higher resolution than 16S rRNA gene sequencing and was applied in this study for the first time to isolates recovered directly from field-collected cowpea root nodules. The method thus seems suitable for screening isolate collections on the presence of different groups, which, provided an appropriate reference database, can also be assigned to known species.

9.
Appl Microbiol Biotechnol ; 99(13): 5547-62, 2015 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-25776061

RESUMEN

Accurate identification of soil bacteria that form nitrogen-fixing associations with legume crops is challenging given the phylogenetic diversity of root nodule bacteria (RNB). The labor-intensive and time-consuming 16S ribosomal RNA (rRNA) sequencing and/or multilocus sequence analysis (MLSA) of conserved genes so far remain the favored molecular tools to characterize symbiotic bacteria. With the development of mass spectrometry (MS) as an alternative method to rapidly identify bacterial isolates, we recently showed that matrix-assisted laser desorption ionization (MALDI) time-of-flight (TOF) can accurately characterize RNB found inside plant nodules or grown in cultures. Here, we report on the development of a MALDI-TOF RNB-specific spectral database built on whole cell MS fingerprints of 116 strains representing the major rhizobial genera. In addition to this RNB-specific module, which was successfully tested on unknown field isolates, a subset of 13 ribosomal proteins extracted from genome data was found to be sufficient for the reliable identification of nodule isolates to rhizobial species as shown in the putatively ascribed ribosomal protein masses (PARPM) database. These results reveal that data gathered from genome sequences can be used to expand spectral libraries to aid the accurate identification of bacterial species by MALDI-TOF MS.


Asunto(s)
Bacterias/química , Bacterias/clasificación , Biodiversidad , Proteínas Ribosómicas/análisis , Nódulos de las Raíces de las Plantas/microbiología , Microbiología del Suelo , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Bacterias/genética , Proteínas Bacterianas/genética , Biomarcadores/análisis , Análisis por Conglomerados , ADN Ribosómico/química , ADN Ribosómico/genética , Datos de Secuencia Molecular , Filogenia , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN
10.
J Dairy Sci ; 97(1): 240-6, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24210492

RESUMEN

Airborne communities (mainly bacteria) were sampled and characterized (concentration levels and diversity) at 1 outdoor and 6 indoor sites within a Swiss dairy production facility. Air samples were collected on 2 sampling dates in different seasons, one in February and one in July 2012 using impaction bioaerosol samplers. After cultivation, isolates were identified by mass spectrometry (matrix-assisted laser desorption/ionization-time-of-flight) and molecular (sequencing of 16S rRNA and rpoB genes) methods. In general, total airborne particle loads and total bacterial counts were higher in winter than in summer, but remained constant within each indoor sampling site at both sampling times (February and July). Bacterial numbers were generally very low (<100 cfu/m(3) of air) during the different steps of milk powder production. Elevated bacterial concentrations (with mean values of 391 ± 142 and 179 ± 33 cfu/m(3) of air during winter and summer sampling, respectively; n=15) occurred mainly in the "logistics area," where products in closed tins are packed in secondary packaging material and prepared for shipping. However, total bacterial counts at the outdoor site varied, with a 5- to 6-fold higher concentration observed in winter compared with summer. Twenty-five gram-positive and gram-negative genera were identified as part of the airborne microflora, with Bacillus and Staphylococcus being the most frequent genera identified. Overall, the culturable microflora community showed a composition typical and representative for the specific location. Bacterial counts were highly correlated with total airborne particles in the size range 1 to 5 µm, indicating that a simple surveillance system based upon counting of airborne particles could be implemented. The data generated in this study could be used to evaluate the effectiveness of the dairy plant's sanitation program and to identify potential sources of airborne contamination, resulting in increased food safety.


Asunto(s)
Microbiología del Aire , Bacterias Aerobias/aislamiento & purificación , Bacterias/aislamiento & purificación , Industria Lechera/métodos , Leche/microbiología , Animales , Bacterias/clasificación , Bacterias Aerobias/clasificación , Carga Bacteriana , Contaminación de Alimentos/análisis , Microbiología de Alimentos , Genes Bacterianos , ARN Ribosómico 16S/genética , Estaciones del Año , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
11.
Nanotechnology ; 24(33): 335703, 2013 Aug 23.
Artículo en Inglés | MEDLINE | ID: mdl-23892397

RESUMEN

Scanning probe microscopy (SPM) has facilitated many scientific discoveries utilizing its strengths of spatial resolution, non-destructive characterization and realistic in situ environments. However, accurate spatial data are required for quantitative applications but this is challenging for SPM especially when imaging at higher frame rates. We present a new operation mode for scanning probe microscopy that uses advanced image processing techniques to render accurate images based on position sensor data. This technique, which we call sensor inpainting, frees the scanner to no longer be at a specific location at a given time. This drastically reduces the engineering effort of position control and enables the use of scan waveforms that are better suited for the high inertia nanopositioners of SPM. While in raster scanning, typically only trace or retrace images are used for display, in Archimedean spiral scans 100% of the data can be displayed and at least a two-fold increase in temporal or spatial resolution is achieved. In the new mode, the grid size of the final generated image is an independent variable. Inpainting to a few times more pixels than the samples creates images that more accurately represent the ground truth.

12.
Rev Sci Instrum ; 94(9)2023 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-37695116

RESUMEN

High-speed atomic force microscopy (HS-AFM) is a technique capable of revealing the dynamics of biomolecules and living organisms at the nanoscale with a remarkable temporal resolution. The phase delay in the feedback loop dictates the achievable speed of HS-AFM instruments that rely on fast nanopositioners operated predominantly in conjunction with piezoelectric actuators (PEAs). The high capacitance and high operating voltage of PEAs make them difficult to drive. The limited bandwidth of associated high-voltage piezo-amplifiers is one of the bottlenecks to higher scan speeds. In this study, we report a high-voltage, wideband voltage amplifier comprised of a separate amplification and novel voltage-follower power stage, requiring no global feedback. The reported amplifier can deliver a current over ±2 amps, offers a small-signal bandwidth of 1 MHz, and exhibits an exceptionally low phase lag, making it particularly well suited for the needs of next-generation HS-AFMs. We demonstrate its capabilities by reporting its achievable bandwidth under various PEA loads and showcasing its merit for HS-AFM by imaging tubulin protofilament dynamics at sub-second frame rates.

13.
Clin Microbiol Infect ; 29(2): 190-199, 2023 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-35623578

RESUMEN

OBJECTIVES: Matrix assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry (MS) is a widely used method for bacterial species identification. Incomplete databases and mass spectral quality (MSQ) still represent major challenges. Important proxies for MSQ are the number of detected marker masses, reproducibility, and measurement precision. We aimed to assess MSQs across diagnostic laboratories and the potential of simple workflow adaptations to improve it. METHODS: For baseline MSQ assessment, 47 diverse bacterial strains, which are challenging to identify by MALDI-TOF MS, were routinely measured in 36 laboratories from 12 countries, and well-defined MSQ features were used. After an intervention consisting of detailed reported feedback and instructions on how to acquire MALDI-TOF mass spectra, measurements were repeated and MSQs were compared. RESULTS: At baseline, we observed heterogeneous MSQ between the devices, considering the median number of marker masses detected (range = [2-25]), reproducibility between technical replicates (range = [55%-86%]), and measurement error (range = [147 parts per million (ppm)-588 ppm]). As a general trend, the spectral quality was improved after the intervention for devices, which yielded low MSQs in the baseline assessment as follows: for four out of five devices with a high measurement error, the measurement precision was improved (p-values <0.001, paired Wilcoxon test); for six out of ten devices, which detected a low number of marker masses, the number of detected marker masses increased (p-values <0.001, paired Wilcoxon test). DISCUSSION: We have identified simple workflow adaptations, which, to some extent, improve MSQ of poorly performing devices and should be considered by laboratories yielding a low MSQ. Improving MALDI-TOF MSQ in routine diagnostics is essential for increasing the resolution of bacterial identification by MALDI-TOF MS, which is dependent on the reproducible detection of marker masses. The heterogeneity identified in this external quality assessment (EQA) requires further study.


Asunto(s)
Bacterias , Laboratorios , Humanos , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Reproducibilidad de los Resultados , Flujo de Trabajo
14.
EMBO J ; 27(19): 2603-15, 2008 Oct 08.
Artículo en Inglés | MEDLINE | ID: mdl-18772882

RESUMEN

Loss of expression of the cell-cell adhesion molecule E-cadherin is a hallmark of epithelial-mesenchymal transition (EMT) in development and in the progression from epithelial tumours to invasive and metastatic cancers. Here, we demonstrate that the loss of E-cadherin function upregulates expression of the neuronal cell adhesion molecule (NCAM). Subsequently, a subset of NCAM translocates from fibroblast growth factor receptor (FGFR) complexes outside lipid rafts into lipid rafts where it stimulates the non-receptor tyrosine kinase p59(Fyn) leading to the phosphorylation and activation of focal adhesion kinase and the assembly of integrin-mediated focal adhesions. Ablation of NCAM expression during EMT inhibits focal adhesion assembly, cell spreading and EMT. Conversely, forced expression of NCAM induces epithelial cell delamination and migration, and high NCAM expression correlates with tumour invasion. These results establish a mechanistic link between the loss of E-cadherin expression, NCAM function, focal adhesion assembly and cell migration and invasion.


Asunto(s)
Cadherinas/metabolismo , Adhesiones Focales/metabolismo , Moléculas de Adhesión de Célula Nerviosa/metabolismo , Animales , Cadherinas/genética , Línea Celular , Movimiento Celular/fisiología , Epitelio/fisiología , Regulación de la Expresión Génica , Humanos , Microdominios de Membrana/metabolismo , Mesodermo/fisiología , Ratones , Ratones Noqueados , Invasividad Neoplásica , Neoplasias/metabolismo , Neoplasias/patología , Moléculas de Adhesión de Célula Nerviosa/genética , Neuronas/citología , Neuronas/metabolismo , Proteínas Proto-Oncogénicas c-fyn/genética , Proteínas Proto-Oncogénicas c-fyn/metabolismo , Receptores de Factores de Crecimiento de Fibroblastos/metabolismo
15.
Parasitology ; 139(2): 248-58, 2012 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-22008297

RESUMEN

Culicoides biting midges are of great importance as vectors of pathogens and elicitors of allergy. As an alternative for the identification of these tiny insects, matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) was evaluated. Protein mass fingerprints were determined for 4-5 field-caught reference (genetically confirmed) individuals of 12 Culicoides species from Switzerland, C. imicola from France, laboratory-reared C. nubeculosus and a non-biting midge. Reproducibility and accuracy of the database was tested in a validation study by analysing 108 mostly field-caught target Culicoides midges and 3 specimens from a non-target species. A reference database of biomarker mass sets containing between 24 and 38 masses for the different species could be established. Automated database-based identification was achieved for 101 of the 108 specimens. The remaining 7 midges required manual full comparison with the reference spectra yielding correct identification for 6 specimens and an ambiguous result for the seventh individual. Specimens of the non-target species did not yield identification. Protein profiling by MALDI-TOF, which is compatible with morphological and genetic identification of specimens, can be used as an alternative, quick and inexpensive tool to accurately identify Culicoides biting midges collected in the field.


Asunto(s)
Ceratopogonidae/genética , Proteínas de Insectos/metabolismo , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Animales , Biomarcadores , Ceratopogonidae/clasificación , Perfilación de la Expresión Génica , Regulación de la Expresión Génica/fisiología , Proteínas de Insectos/genética , Filogenia , Reproducibilidad de los Resultados , Especificidad de la Especie
16.
Nanotechnology ; 22(7): 075501, 2011 Feb 18.
Artículo en Inglés | MEDLINE | ID: mdl-21233549

RESUMEN

We demonstrate frequency modulation Kelvin probe force microscopy operated in lift-mode under ambient conditions. Frequency modulation detection is sensitive to force gradients rather than forces as in the commonly used amplitude modulation technique. As a result there is less influence from electric fields originating from the tip's cone and cantilever, and the recorded surface potential does not suffer from the large lateral averaging observed in amplitude modulated Kelvin probe force microscopy. The frequency modulation technique further shows a reduced dependence on the lift-height and the frequency shift can be used to map the second order derivative of the tip-sample capacitance which gives high resolution material contrast of dielectric sample properties. The sequential nature of the lift-mode technique overcomes various problems of single-scan techniques, where crosstalk between the Kelvin probe and topography feedbacks often impair the correct interpretation of the recorded data in terms of quantitative electric surface potentials.

17.
BMC Vet Res ; 7: 6, 2011 Jan 27.
Artículo en Inglés | MEDLINE | ID: mdl-21272304

RESUMEN

BACKGROUND: Methicillin-resistant coagulase-negative staphylococci (MR-CNS) are of increasing importance to animal and public health. In veterinary medicine and along the meat and milk production line, only limited data were so far available on MR-CNS characteristics. The aim of the present study was to evaluate the prevalence of MR-CNS, to identify the detected staphylococci to species level, and to assess the antibiotic resistance profiles of isolated MR-CNS strains. RESULTS: After two-step enrichment and growth on chromogenic agar, MR-CNS were detected in 48.2% of samples from livestock and chicken carcasses, 46.4% of samples from bulk tank milk and minced meat, and 49.3% of human samples. Using matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS), 414 selected MR-CNS strains belonged to seven different species (S. sciuri, 32.6%; S. fleurettii, 25.1%; S. haemolyticus, 17.4%; S. epidermidis, 14.5%, S. lentus, 9.2%; S. warneri, 0.7%; S. cohnii, 0.5%). S. sciuri and S. fleurettii thereby predominated in livestock, BTM and minced meat samples, whereas S. epidermidis and S. haemolyticus predominated in human samples. In addition to beta-lactam resistance, 33-49% of all 414 strains were resistant to certain non-beta-lactam antibiotics (ciproflaxacin, clindamycin, erythromycin, tetracycline). CONCLUSIONS: A high prevalence of MR-CNS was found in livestock production. This is of concern in view of potential spread of mecA to S. aureus (MRSA). Multiresistant CNS strains might become an emerging problem for veterinary medicine. For species identification of MR-CNS isolated from different origins, MALDI-TOF MS proved to be a fast and reliable tool and is suitable for screening of large sample amounts.


Asunto(s)
Bovinos/microbiología , Pollos/microbiología , Carne/microbiología , Resistencia a la Meticilina , Leche/microbiología , Staphylococcus/aislamiento & purificación , Animales , Coagulasa/metabolismo , Humanos , Pruebas de Sensibilidad Microbiana/veterinaria , Prevalencia , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Staphylococcus/enzimología , Staphylococcus/genética
18.
Micromachines (Basel) ; 12(8)2021 Aug 10.
Artículo en Inglés | MEDLINE | ID: mdl-34442564

RESUMEN

We discuss distributed chemical sensing based on the swelling of coatings of optical fibers. Volume changes in the coating induce strain in the fiber's glass core, provoking a local change in the refractive index which is detectable by distributed fiber optical sensing techniques. We describe methods to realize different coatings on a single fiber. Simultaneous detection of swelling processes all along the fiber opens the possibility to interrogate thousands of differently functionalized sections on a single fiber. Principal component analysis is used to enable sensors for environmental monitoring, food analysis, agriculture, water quality monitoring, or medical diagnostics.

19.
J Clin Microbiol ; 48(8): 2846-51, 2010 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-20554814

RESUMEN

Cronobacter spp. are Gram-negative opportunistic food-borne pathogens and are known as rare but important causes of life-threatening neonatal infections. Rapid and reliable identification of Cronobacter species and their differentiation from phenotypically similar, nonpathogenic Enterobacter turicensis, Enterobacter helveticus, and Enterobacter pulveris have become increasingly important. We evaluated here the application of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) for rapid genus and species identification of the six Cronobacter species recognized so far. To this end, we developed a reference MS database library that includes 54 Cronobacter target strains as well as 17 nontarget strains. The strains provided reproducible and unique mass spectra profiles covering a wide molecular mass range (2,000 to 30,000 Da). Genus- and species-specific biomarker protein mass patterns were determined. The defined biomarker mass patterns (Spectral Archive and Microbial Identification System [SARAMIS] SuperSpectrum) were validated using 36 strains from various Cronobacter species as well as eight nontarget strains. For all strains the mass spectrometry-based identification scheme yielded identical results as with a PCR-based identification system. All strains were correctly identified, and no nontarget strain was misidentified as Cronobacter. Our study demonstrates that MALDI-TOF MS is a reliable and powerful tool for the rapid identification of Cronobacter strains to the genus and species level.


Asunto(s)
Técnicas Bacteriológicas/métodos , Enterobacteriaceae/química , Enterobacteriaceae/clasificación , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Infecciones por Enterobacteriaceae/diagnóstico , Humanos , Reacción en Cadena de la Polimerasa/métodos , Sensibilidad y Especificidad
20.
Rev Sci Instrum ; 79(6): 063704, 2008 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-18601410

RESUMEN

We introduce a feed-forward technique for lift-mode Kelvin probe force microscopy to minimize electrostatically induced errors in topography scans. Such errors typically occur when a grounded tip is scanned over a heterogeneous sample with differences in local work function or areas of local surface charging. To minimize electrostatic forces during the topography scan we bias the tip with the surface potential recorded in the previous Kelvin probe scan line. With this method we achieve an error free topography on samples with large variations in local surface potential. Compared to conventional tapping mode, we further observe a significant reduction of tip-induced surface charge modifications on charge patterns written in electret films.

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