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1.
Cell ; 184(25): 6067-6080.e13, 2021 12 09.
Artículo en Inglés | MEDLINE | ID: mdl-34852238

RESUMEN

The human monoclonal antibody (HmAb) C10 potently cross-neutralizes Zika virus (ZIKV) and dengue virus. Analysis of antibody fragment (Fab) C10 interactions with ZIKV and dengue virus serotype 2 (DENV2) particles by cryoelectron microscopy (cryo-EM) and amide hydrogen/deuterium exchange mass spectrometry (HDXMS) shows that Fab C10 binding decreases overall ZIKV particle dynamics, whereas with DENV2, the same Fab causes increased dynamics. Testing of different Fab C10:DENV2 E protein molar ratios revealed that, at higher Fab ratios, especially at saturated concentrations, the Fab enhanced viral dynamics (detected by HDXMS), and observation under cryo-EM showed increased numbers of distorted particles. Our results suggest that Fab C10 stabilizes ZIKV but that with DENV2 particles, high Fab C10 occupancy promotes E protein dimer conformational changes leading to overall increased particle dynamics and distortion of the viral surface. This is the first instance of a broadly neutralizing antibody eliciting virus-specific increases in whole virus particle dynamics.


Asunto(s)
Anticuerpos Neutralizantes , Virus del Dengue , Dengue , Proteínas del Envoltorio Viral , Infección por el Virus Zika , Virus Zika , Anticuerpos Monoclonales/inmunología , Anticuerpos Neutralizantes/inmunología , Anticuerpos Neutralizantes/metabolismo , Anticuerpos Antivirales/inmunología , Reacciones Cruzadas , Dengue/inmunología , Dengue/virología , Virus del Dengue/inmunología , Virus del Dengue/fisiología , Humanos , Unión Proteica , Proteínas del Envoltorio Viral/química , Proteínas del Envoltorio Viral/inmunología , Proteínas del Envoltorio Viral/metabolismo , Virus Zika/inmunología , Virus Zika/fisiología , Infección por el Virus Zika/inmunología , Infección por el Virus Zika/virología
2.
Emerg Infect Dis ; 30(1): 189-192, 2024 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-38086397

RESUMEN

Using Oxford Nanopore technologies and phylogenetic analyses, we sequenced and identified the cosmopolitan genotype of dengue virus serotype 2 isolated from 2 patients in the city of Villavicencio, Meta department, Colombia. This identification suggests the emergence of this genotype in the country, which warrants further surveillance to identify its epidemic potential.


Asunto(s)
Virus del Dengue , Dengue , Humanos , Dengue/epidemiología , Serogrupo , Filogenia , Colombia/epidemiología , Genotipo
3.
J Med Virol ; 96(6): e29727, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38864343

RESUMEN

Dengue, a mosquito-borne viral disease, poses a significant public health challenge in Pakistan, with a significant outbreak in 2023, prompting our investigation into the serotype and genomic diversity of the dengue virus (DENV). NS-1 positive blood samples from 153 patients were referred to the National Institute of Health, Pakistan, between July and October 2023. Among these, 98 (64.1%) tested positive using multiplex real-time PCR, with higher prevalence among males (65.8%) and individuals aged 31-40. Serotyping revealed DENV-1 as the predominant serotype (84.7%), followed by DENV-2 (15.3%). Whole-genome sequencing of 18 samples (DENV-1 = 17, DENV-2 = 01) showed that DENV-1 (genotype III) samples were closely related (>99%) to Pakistan outbreak samples (2022), and approx. > 98% with USA (2022), Singapore and China (2016), Bangladesh (2017), and Pakistan (2019). The DENV-2 sequence (cosmopolitan genotype; clade IVA) shared genetic similarity with Pakistan outbreak sequences (2022), approx. > 99% with China and Singapore (2018-2019) and showed divergence from Pakistan sequences (2008-2013). No coinfection with dengue serotypes or other viruses were observed. Comparisons with previous DENV-1 sequences highlighted genetic variations affecting viral replication efficiency (NS2B:K55R) and infectivity (E:M272T). These findings contribute to dengue epidemiology understanding and underscore the importance of ongoing genomic surveillance for future outbreak responses in Pakistan.


Asunto(s)
Virus del Dengue , Dengue , Brotes de Enfermedades , Variación Genética , Genoma Viral , Genotipo , Filogenia , Serogrupo , Secuenciación Completa del Genoma , Humanos , Pakistán/epidemiología , Virus del Dengue/genética , Virus del Dengue/clasificación , Virus del Dengue/aislamiento & purificación , Dengue/epidemiología , Dengue/virología , Masculino , Adulto , Femenino , Adulto Joven , Persona de Mediana Edad , Adolescente , Niño , Genoma Viral/genética , Preescolar , Anciano , Lactante , Serotipificación , ARN Viral/genética
4.
Microb Pathog ; 195: 106894, 2024 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-39214424

RESUMEN

Dengue virus (DENV) infection is a worldwide public health concern infecting approximately 400 million individuals and about 40,000 mortalities yearly. Despite this, no licensed or readily available antiviral medication is currently available specifically for DENV infection, and therapy is typically symptomatic. Therefore, the objective of the study was to investigate the antiviral activity of Beta vulgaris L. phytoconstituents against DENV-2 targeting NS3 protein. The antiviral activity of phytochemicals was examined through virtual ligand-based screening, antiviral inhibition and dosage response assays, western blotting analysis and MD simulations. We conducted toxicological, and pharmacokinetic analysis to assess plant-based natural compound's efficacy, safety, and non-toxic doses. Molecular docking and MD simulation results revealed that the nonstructural protein-3 (NS3) might prove as a funamental target for Betanin and Glycine Betaine against Dengue virus. Betanin and Glycine betaine were initially studied for their non-toxic doses in HeLa, CHO, and Vero cells via MTT assay. HeLa cells were transiently transfected with cloned vector pcDNA3.1/Zeo(+)/DENV-2 NS3 along with non-toxic doses (80 µM-10 µM) of selected phytochemicals. The dose-response assay illustrated downregulated expression of DENV-2 NS3 gene after administration of Betanin (IC50 = 4.35 µM) and Glycine Betaine (IC50 = 4.49 µM). Dose response analysis of Betanin (80 µM-10 µM) depicted the significant inhibition of NS3 protein expression as well. These results suggested downregulated expression of DENV-2 NS3 at mRNA and protein level portraying the DENV replication inhibition. Based on our study findings, NS3 protease is depicted as distinctive DENV-2 inhibitor target. We will channel our study further into in vitro characterization employing the mechanistic study to understand the role of host factors in anti-flavi therapeutic.


Asunto(s)
Antivirales , Betaína , Virus del Dengue , Simulación del Acoplamiento Molecular , Virus del Dengue/efectos de los fármacos , Virus del Dengue/genética , Humanos , Antivirales/farmacología , Células HeLa , Animales , Chlorocebus aethiops , Células Vero , Betaína/farmacología , Proteínas no Estructurales Virales/metabolismo , Proteínas no Estructurales Virales/genética , Betacianinas/farmacología , Células CHO , Cricetulus , Fitoquímicos/farmacología , Simulación de Dinámica Molecular , Replicación Viral/efectos de los fármacos , Serina Endopeptidasas/metabolismo , Serina Endopeptidasas/genética , Dengue/tratamiento farmacológico , Dengue/virología , Proteasas Virales
5.
Arch Microbiol ; 206(4): 162, 2024 Mar 14.
Artículo en Inglés | MEDLINE | ID: mdl-38483579

RESUMEN

Dengue virus, particularly serotype 2 (DENV-2), poses a significant global health threat, and understanding the molecular basis of its interactions with host cell proteins is imperative for developing targeted therapeutic strategies. This study elucidated the interactions between proline-enriched motifs and Src homology 3 (SH3) domain. The SH3 domain is pivotal in mediating protein-protein interactions, particularly by recognizing and binding to proline-rich regions in partner proteins. Through a computational pipeline, we analyzed the interactions and binding modes of proline-enriched motifs with SH3 domains, identified new potential DENV-2 interactions with the SH3 domain, and revealed potential hot spot residues, underscoring their significance in the viral life cycle. This comprehensive analysis provides crucial insights into the molecular basis of DENV-2 infection, highlighting conserved and serotype-specific interactions. The identified hot spot residues offer potential targets for therapeutic intervention, laying the foundation for developing antiviral strategies against Dengue virus infection. These findings contribute to the broader understanding of viral-host interactions and provide a roadmap for future research on Dengue virus pathogenesis and treatment.


Asunto(s)
Interacciones Microbiota-Huesped , Dominios Homologos src , Unión Proteica , Secuencia de Bases , Prolina/metabolismo
6.
J Med Virol ; 95(11): e29255, 2023 11.
Artículo en Inglés | MEDLINE | ID: mdl-38009688

RESUMEN

In 2022, a large dengue outbreak was reported in Vietnam, where dengue was endemic. A total of 1889 acute-phase serum samples were collected from patients with suspected dengue at Vung Tau General Hospital, the core hospital in Vung Tau Province, southern Vietnam. Among the 1889 samples analyzed for laboratory confirmation of dengue virus (DENV) infection, 339 positive cases were identified, of which 130 were primary infections and 209 were secondary infections. DENV-2 was the dominant serotype in both primary and secondary infection groups. Phylogenetic analysis based on sequences of the envelope protein-coding region revealed the emergence of a new DENV-2 lineage during this outbreak.


Asunto(s)
Virus del Dengue , Dengue , Humanos , Virus del Dengue/genética , Dengue/epidemiología , Filogenia , Vietnam/epidemiología , Genotipo , Brotes de Enfermedades , Serogrupo
7.
Virol J ; 20(1): 231, 2023 10 11.
Artículo en Inglés | MEDLINE | ID: mdl-37821951

RESUMEN

The global incidence of dengue fever has gradually increased in recent years, posing a serious threat to human health. In the absence of specific anti-dengue drugs, understanding the interaction of Dengue virus (DENV) with the host is essential for the development of effective therapeutic measures. Autophagy is often activated during DENV infection to promote viral replication, but the mechanism of how DENV's own proteins induce autophagy has not been clarified. In this study, we first preliminarily identified DENV-2 NS1 as the most likely viral protein for DENV-2-induced autophagy with the help of molecular docking techniques. Further experimental results confirmed that DENV-2 NS1 regulates DENV-2 infection of HUVEC-induced autophagy through the AMPK/ERK/mTOR signaling pathway. Mechanistically, DENV-2 NS1 mainly interacted with AMPK by means of its Wing structural domain, and NS1 bound to all three structural domains on the AMPKα subunit. Finally, the experimental results showed that DENV-2 NS1 promoted the interaction between LKB1 and AMPKα1 and thus activated AMPK by both increasing the expression of LKB1 and binding LKB1. In conclusion, the results of this study revealed that DENV-2 NS1 protein served as a platform for the interaction between AMPK and LKB1 after DENV-2 infection with HUVEC, and pulled AMPK and LKB1 together to form a complex. LKB1 to form a complex, promoting LKB1 action on the kinase structural domain of AMPKα1, which in turn promotes phosphorylation of the Thr172 site on the AMPK kinase structural domain and activates AMPK, thereby positively regulating the AMPK/ERK/mTOR signaling pathway and inducing autophagy. The present discovery improves our understanding of DENV-2-induced host autophagy and contributes to the development of anti-dengue drugs.


Asunto(s)
Virus del Dengue , Dengue , Humanos , Proteínas Quinasas Activadas por AMP/metabolismo , Autofagia , Virus del Dengue/fisiología , Simulación del Acoplamiento Molecular , Transducción de Señal , Serina-Treonina Quinasas TOR/metabolismo , Proteínas no Estructurales Virales/metabolismo
8.
Bioorg Med Chem Lett ; 83: 129174, 2023 03 01.
Artículo en Inglés | MEDLINE | ID: mdl-36764470

RESUMEN

Drug repurposing approach was applied to find a potent antiviral agent against RNA viruses such as SARS-CoV-2, influenza viruses and dengue virus with a concise strategy of small change in parent molecular structure. For this purpose, ß-D-N4-hydroxycytidine (NHC, 1) with a broad spectrum of antiviral activity was chosen as the parent molecule. Among the prepared NHC analogs (8a-g, and 9) from uridine, ß-D-N4-O-isobutyrylcytidine (8a) showed potent activity against SARS-CoV-2 (EC50 3.50 µM), Flu A (H1N1) (EC50 5.80 µM), Flu A (H3N2) (EC50 7.30 µM), Flu B (EC50 3.40 µM) and DENV-2 (EC50 3.95 µM) in vitro. Furthermore, its potency against SARS-CoV-2 was >5-fold, 3.4-fold, and 3-fold compared to that of NHC (1), MK-4482 (2), and remdesivir (RDV) in vitro, respectively. Ultimately, compound 8a was expected to be a potent inhibitor toward RNA viruses as a viral mutagenic agent like MK-4482.


Asunto(s)
COVID-19 , Subtipo H1N1 del Virus de la Influenza A , Humanos , SARS-CoV-2 , Subtipo H3N2 del Virus de la Influenza A , Replicación Viral , Antivirales/química
9.
Virol J ; 19(1): 228, 2022 12 31.
Artículo en Inglés | MEDLINE | ID: mdl-36587218

RESUMEN

BACKGROUND: Dengue virus type 2 (DENV-2) was used to infect primary human umbilical vein endothelial cells (HUVECs) to examine autophagy induced by activation of the adenosine monophosphate-activated protein kinase (AMPK)/extracellular signal-regulated kinase (ERK)/mammalian target of rapamycin (mTOR) signaling pathway following tripartite motif-containing 22 (TRIM22)-mediated DENV-2 infection to further reveal the underlying pathogenic mechanism of DENV-2 infection. METHODS: Quantitative real-time polymerase chain reaction (qRT-PCR) was used to screen putative interference targets of TRIM22 and determine the knockdown efficiency. The effect of TRIM22 knockdown on HUVEC proliferation was determined using the CCK8 assay. Following TRIM22 knockdown, transmission electron microscopy (TEM) was used to determine the ultrastructure of HUVEC autophagosomes and expression of HUVEC autophagy and AMPK pathway-related genes were measured by qRT-PCR. Moreover, HUVEC autophagy and AMPK pathway-related protein expression levels were determined by western blot analysis. Cell cycle and apoptosis were assessed by flow cytometry (FCM) and the autophagosome structure of the HUVECs was observed by TEM. RESULTS: Western blot results indicated that TRIM22 protein expression levels increased significantly 36 h after DENV-2 infection, which was consistent with the proteomics prediction. The CCK8 assay revealed that HUVEC proliferation was reduced following TRIM22 knockdown (P < 0.001). The TEM results indicated that HUVEC autolysosomes increased and autophagy was inhibited after TRIM22 knockdown. The qRT-PCR results revealed that after TRIM22 knockdown, the expression levels of antithymocyte globulin 7 (ATG7), antithymocyte globulin 5 (ATG5), Beclin1, ERK, and mTOR genes decreased (P < 0.01); however, the expression of AMPK genes (P < 0.05) and P62 genes (P < 0.001) increased. FCM revealed that following TRIM22 knockdown, the percentage of HUVECs in the G2 phase increased (P < 0.001) along with cell apoptosis. The effect of TRIM22 overexpression on HUVEC autophagy induced by DENV-2 infection and AMPK pathways decreased after adding an autophagy inhibitor. CONCLUSIONS: In HUVECs, TRIM22 protein positively regulates autophagy and may affect autophagy through the AMPK/ERK/mTOR signaling pathway. Autophagy is induced by activation of the AMPK/ERK/mTOR signaling pathway following TRIM22-mediated DENV-2 infection of HUVECs.


Asunto(s)
Proteínas Quinasas Activadas por AMP , Quinasas MAP Reguladas por Señal Extracelular , Humanos , Proteínas Quinasas Activadas por AMP/genética , Proteínas Quinasas Activadas por AMP/metabolismo , Células Endoteliales de la Vena Umbilical Humana , Quinasas MAP Reguladas por Señal Extracelular/metabolismo , Sirolimus/farmacología , Suero Antilinfocítico/farmacología , Transducción de Señal , Serina-Treonina Quinasas TOR/genética , Serina-Treonina Quinasas TOR/metabolismo , Serina-Treonina Quinasas TOR/farmacología , Autofagia , Proteínas de Motivos Tripartitos/genética , Proteínas de Motivos Tripartitos/farmacología , Proteínas Represoras/metabolismo , Antígenos de Histocompatibilidad Menor/farmacología
10.
Molecules ; 27(14)2022 Jul 18.
Artículo en Inglés | MEDLINE | ID: mdl-35889438

RESUMEN

A study was conducted to investigate the anti-viral effect of a styrylpyrone derivative (SPD) called goniothalamin and the effects on the dengue virus serotype 2 (DENV-2) replication cycle. The SPD was prepared from the root of Goniothalamus umbrosus after purification with petroleum ether. The isolated SPD was then subjected to gas chromatography-mass spectrometry (GC-MS) and nuclear magnetic resonance (NMR) analyses for structure validation. The cytotoxicity of the SPD was evaluated using a cell viability assay, while the anti-viral activity of the SPD towards DENV-2 was confirmed by conducting a foci reduction assay which involved virus yield reduction, time-of-addition, and time removal assays. Transcriptomic analysis via quantitative real-time polymerase chain reaction (qRT-PCR) using the DENV-2 E gene was conducted to investigate the level of gene transcript. Immunocytochemistry analysis was used to investigate the effects of SPD treatment on protein E expression. Finally, software molecular docking of the SPD and E protein was also performed. The cytotoxicity assay confirmed that the SPD was not toxic to Vero cells, even at the highest concentration tested. In the time-of-addition assay, more than 80% foci reduction was observed when SPDs were administered at 2 h post-infection (hpi), and the reduction percentage then dropped with the delay of the treatment time, suggesting the inhibition of the early replication cycle. However, the time removal assay showed that more than 80% reduction could only be observed after 96 h post-treatment with the SPD. Treatment with the SPD reduced the progeny infectivity when treated for 24 h and was dose-dependent. The result showed that transcript level of the E gene in infected cells treated with the SPD was reduced compared to infected cells without treatment. In immunocytochemistry analysis, the DENV-2 E protein exhibited similar expression trends, shown by the gene transcription level. Molecular docking showed that the SPD can interact with E protein through hydrogen bonds and other interactions. Overall, this study showed that SPDs have the potential to be anti-DENV-2 via a reduction in viral progeny infectivity and a reduction in the expression of the DENV-2 E gene and protein at different phases of viral replication. SPDs should be further researched to be developed into an effective anti-viral treatment, particularly for early-phase dengue viral infection.


Asunto(s)
Virus del Dengue , Dengue , Goniothalamus , Animales , Antivirales/química , Chlorocebus aethiops , Dengue/tratamiento farmacológico , Humanos , Simulación del Acoplamiento Molecular , Serogrupo , Células Vero , Replicación Viral
11.
Pharmacol Res ; 170: 105721, 2021 08.
Artículo en Inglés | MEDLINE | ID: mdl-34116207

RESUMEN

Dengue virus (DENV) is the most prevalent arthropod-borne viral disease of humans and has a major impact on global public health. There is no clinically approved drugs for DENV infection. Since intracellular VEGFR2 is increased in DENV infected patients, we thus hypothesized that VEGFR2 participated DENV proliferation and its inhibitors could be served as antivirals against DENV. Actually our results showed that VEGFR2 was induced by DENV infection. Also the agonist of VEGFR2, VEGF-A, promoted DENV proliferation. Therefore, we screened the inhibitors of VEGFR2 and found that brivanib alaninate (brivanib) showed the best anti-DENV ability with the lowest cellular cytotoxicity. Mechanically, our results indicated VEGFR2 directly interacted with PTP1B to dephosphorylate AMPK to provide lipid environment for viral replication. However, this effect could be inhibited by brivanib, which significantly reversed the reduction of AMPK phosphorylation caused by DENV infection, thus improving the cellular lipid environment. Moreover, the antiviral effect of brivanib could be reversed by AMPK inhibitor, Compound C. In addition, oral administration of brivianib (20-50 mg/kg/day) clearly improved the survival rate of DENV2 infection, and this effect was abolished in accompanied with Compound C (10mg/kg/day). Collectively, our study disclosed the mechanism of VEGFR2 in DENV2 and evaluated the antiviral ability of brivanib, which deserved more attention for clinical usage in DENV infection.


Asunto(s)
Proteínas Quinasas Activadas por AMP/metabolismo , Alanina/análogos & derivados , Antivirales/farmacología , Virus del Dengue/efectos de los fármacos , Dengue/tratamiento farmacológico , Células Endoteliales/efectos de los fármacos , Triazinas/farmacología , Receptor 2 de Factores de Crecimiento Endotelial Vascular/antagonistas & inhibidores , Replicación Viral/efectos de los fármacos , Alanina/farmacología , Animales , Células Cultivadas , Dengue/enzimología , Dengue/virología , Virus del Dengue/crecimiento & desarrollo , Virus del Dengue/patogenicidad , Modelos Animales de Enfermedad , Células Endoteliales/enzimología , Células Endoteliales/virología , Interacciones Huésped-Patógeno , Humanos , Ratones , Fosforilación , Proteína Tirosina Fosfatasa no Receptora Tipo 1/metabolismo , Transducción de Señal , Receptor 2 de Factores de Crecimiento Endotelial Vascular/metabolismo
12.
BMC Infect Dis ; 21(1): 1072, 2021 Oct 18.
Artículo en Inglés | MEDLINE | ID: mdl-34663252

RESUMEN

BACKGROUND: COVID-19 cases have been increasing since the epidemic started. One of the major concerns is how clinical symptomatology would behave after coinfection with another virus. CASE PRESENTATION: In this case report, a pediatric native patient from Estado de Mexico (EDOMEX), MEX had severe DENV-2 and acute SARS-CoV-2 at the same time. The clinical features were severe thrombocytopenia, secondary septic shock, cerebral edema, pericardial effusion, fluid overload that exhibited bipalpebral edema in all four extremities, hemophagocytic lymphohistiocytosis (HLH), coronary artery ectasia (CAE), multisystemic inflammatory syndrome in children (MIS-C), and probable COVID-19 pneumonia or acute respiratory distress syndrome (ARDS) that triggered patient intubation. The patient presented unusual symptomatology according to the literature. After 15 days of intubation and 15 more days under surveillance, he was released without respiratory sequelae and without treatment after major clinical improvement. CONCLUSION: The aim of this manuscript is to present clinical challenges that coinfection may cause in pediatric patients, even though COVID-19 in children does not tend to be as severe as in other sectors of the population.


Asunto(s)
COVID-19 , Coinfección , COVID-19/complicaciones , Niño , Humanos , Masculino , México , SARS-CoV-2 , Síndrome de Respuesta Inflamatoria Sistémica
13.
Biotechnol Lett ; 43(11): 2149-2160, 2021 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-34533679

RESUMEN

OBJECTIVES: Serotype 2 of dengue virus (DENV-2) is the most prevalent cause of dengue fevers. In this study, the C-prM gene was used for specific detection of DENV-2 by RT-LAMP assay. The RT-LAMP assay was optimized using the Taguchi design of experiments. RESULTS: The efficiency of the assay in such optimal conditions resulted in 100% sensitivity, 100% specificity, and 100% overall accuracy for detection of 4 copies/µL of the genome of DENV-2. In addition, the detection of 2 copies/µL of the genome of DENV-2 was feasible, although the sensitivity was 50%. Considering the importance of the specific detection of the dengue virus serotypes, the cost-effective RT-LAMP approach can be used for rapid, specific, and sensitive detection of DENV-2. CONCLUSION: RT-LAMP, as a cost-effective method, was optimized using Taguchi array approach for specific and rapid detection of DENV-2. Such methods can facilitate the diagnosis procedure in remote regions.


Asunto(s)
Virus del Dengue , Técnicas de Diagnóstico Molecular/métodos , Técnicas de Amplificación de Ácido Nucleico/métodos , Virus del Dengue/genética , Virus del Dengue/aislamiento & purificación , ARN Viral/análisis , ARN Viral/genética , Sensibilidad y Especificidad , Virología/métodos
14.
Development ; 144(22): 4114-4124, 2017 11 15.
Artículo en Inglés | MEDLINE | ID: mdl-28993398

RESUMEN

The Zika virus (ZIKV) has two lineages, Asian and African, and their impact on developing brains has not been compared. Dengue virus (DENV) is a close family member of ZIKV and co-circulates with ZIKV. Here, we performed intracerebral inoculation of embryonic mouse brains with dengue virus 2 (DENV2), and found that DENV2 is sufficient to cause smaller brain size due to increased cell death in neural progenitor cells (NPCs) and neurons. Compared with the currently circulating Asian lineage of ZIKV (MEX1-44), DENV2 grows slower, causes less neuronal death and fails to cause postnatal animal death. Surprisingly, our side-by-side comparison uncovered that the African ZIKV isolate (MR-766) is more potent at causing brain damage and postnatal lethality than MEX1-44. In comparison with MEX1-44, MR-766 grows faster in NPCs and in the developing brain, and causes more pronounced cell death in NPCs and neurons, resulting in more severe neuronal loss. Together, these results reveal that DENV2 is sufficient to cause smaller brain sizes, and suggest that the ZIKV African lineage is more toxic and causes more potent brain damage than the Asian lineage.


Asunto(s)
Encéfalo/patología , Encéfalo/virología , Virus del Dengue/patogenicidad , Filogenia , Virus Zika/patogenicidad , África , Animales , Animales Recién Nacidos , Asia , Encéfalo/embriología , Muerte Celular , Corteza Cerebral/patología , Virus del Dengue/crecimiento & desarrollo , Gliosis/patología , Gliosis/virología , Ratones Endogámicos C57BL , Microcefalia/patología , Microglía/patología , Microglía/virología , Células-Madre Neurales/patología , Neuronas/patología , Virulencia , Virus Zika/crecimiento & desarrollo
15.
Emerg Infect Dis ; 25(2): 374-376, 2019 02.
Artículo en Inglés | MEDLINE | ID: mdl-30666941

RESUMEN

We tested a sample of 234 wild long-tailed macaques (Macaca fascicularis) trapped in Peninsular Malaysia in 2009, 2010, and 2016 for Zika virus RNA and antibodies. None were positive for RNA, and only 1.3% were seropositive for neutralizing antibodies. Long-tailed macaques are unlikely to be reservoirs for Zika virus in Malaysia.


Asunto(s)
Enfermedades de los Monos/epidemiología , Enfermedades de los Monos/virología , Infección por el Virus Zika/veterinaria , Virus Zika , Animales , Animales Salvajes , Macaca fascicularis , Malasia/epidemiología , ARN Viral , Serogrupo , Virus Zika/clasificación , Virus Zika/genética
16.
J Gen Virol ; 100(12): 1663-1673, 2019 12.
Artículo en Inglés | MEDLINE | ID: mdl-31682219

RESUMEN

The assembly and secretion of flaviviruses are part of an elegantly regulated process. During maturation, the viral polyprotein undergoes several co- and post-translational cleavages mediated by both viral and host proteases. Among these, sequential cleavage at the N and C termini of the hydrophobic capsid anchor (Ca) is crucial in deciding the fate of viral infection. Here, using a refined dengue pseudovirus production system, along with cleavage and furin inhibition assays, immunoblotting and secondary structure prediction analysis, we show that Ca plays a key role in the processing efficiency of dengue virus type 2 (DENV2) structural proteins and viral particle assembly. Replacement of the DENV2 Ca with the homologous regions from West nile or Zika viruses or, alternatively, increasing its length, improved cleavage and hence particle assembly. Further, we showed that substitution of the Ca conserved proline residue (P110) to alanine abolishes pseudovirus production, regardless of the Ca sequence length. Besides providing the results of a biochemical analysis of DENV2 structural polyprotein processing, this study also presents a system for efficient production of dengue pseudoviruses.


Asunto(s)
Proteínas de la Cápside/metabolismo , Cápside/metabolismo , Virus del Dengue/fisiología , Dengue/virología , Ensamble de Virus , Secuencia de Aminoácidos , Animales , Proteínas de la Cápside/química , Línea Celular , Virus del Dengue/clasificación , Humanos , Procesamiento Proteico-Postraduccional , Estructura Secundaria de Proteína , Proteolisis , Replicación Viral , Virus Zika/fisiología
17.
J Biol Phys ; 45(1): 63-76, 2019 03.
Artículo en Inglés | MEDLINE | ID: mdl-30680580

RESUMEN

In this study, we investigate the binding interactions of two synthetic antiviral peptides (DET2 and DET4) on type II dengue virus (DENV2) envelope protein domain III. These two antiviral peptides are designed based on the domain III of the DENV2 envelope protein, which has shown significant inhibition activity in previous studies and can be potentially modified further to be active against all dengue strains. Molecular docking was performed using AutoDock Vina and the best-ranked peptide-domain III complex was further explored using molecular dynamics simulations. Molecular mechanics-Poisson-Boltzmann surface area (MM-PBSA) was used to calculate the relative binding free energies and to locate the key residues of peptide-protein interactions. The predicted binding affinity correlated well with the previous experimental studies. DET4 outperformed DET2 and is oriented within the binding site through favorable vdW and electrostatic interactions. Pairwise residue decomposition analysis has revealed several key residues that contribute to the binding of these peptides. Residues in DET2 interact relatively lesser with the domain III compared to DET4. Dynamic cross-correlation analysis showed that both the DET2 and DET4 trigger different dynamic patterns on the domain III. Correlated motions were seen between the residue pairs of DET4 and the binding site while binding of DET2 results in anti-correlated motion on the binding site. This work showcases the use of computational study in elucidating and explaining the experiment observation on an atomic level.


Asunto(s)
Antivirales/farmacología , Virus del Dengue/efectos de los fármacos , Virus del Dengue/fisiología , Péptidos/metabolismo , Péptidos/farmacología , Antivirales/metabolismo , Virus del Dengue/metabolismo , Enlace de Hidrógeno , Simulación del Acoplamiento Molecular , Dominios Proteicos , Estructura Terciaria de Proteína , Termodinámica , Proteínas del Envoltorio Viral/química , Proteínas del Envoltorio Viral/metabolismo
18.
J Vector Borne Dis ; 56(3): 231-236, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-32655072

RESUMEN

BACKGROUND & OBJECTIVES: Dengue is a major public health problem in northeast India where the majority of the cases go unreported and undiagnosed. Even though all four dengue serotypes are reported, there is a dearth of information on genetic diversity. The present cross-sectional study was undertaken during 2016-17 to determine the genetic variance of dengue virus serotype 2 (DENV-2) based on the envelope (E) glycoprotein gene. METHODS: The serum samples collected from the northeast parts of India, as a part of hospital-based acute febrile illness surveillance, were serotyped. Viral RNA was extracted from DENV-2 serum samples using QIAquick® RNA Extraction Kit. The E gene was amplified by conventional reverse-transcriptase polymerase chain reaction (RT-PCR) and the PCR products were sequenced. RESULTS: The E glycoprotein gene of nine serum samples with high viral RNA concentration (Ct <25) was sequenced. The E gene sequences of eight DENV-2 strains from Assam and Meghalaya aligned with genotype IV (Cosmopolitan) and one strain from Tripura segregated with Asian-I genotype. INTERPRETATION & CONCLUSION: Ongoing laboratory-based surveillance is mandatory to understand the transmission dynamics of dengue in endemic countries. This study concluded that in northeast India, presently two distinct genotypes of DENV-2, namely genotype IVb (Cosmopolitan) and Asian-I genotype are in circulation.


Asunto(s)
Virus del Dengue/genética , Dengue/epidemiología , Variación Genética , Proteínas del Envoltorio Viral/genética , Adulto , Estudios Transversales , Dengue/sangre , Dengue/virología , Virus del Dengue/clasificación , Femenino , Genotipo , Humanos , India/epidemiología , Masculino , Persona de Mediana Edad , Filogenia , ARN Viral/sangre , Serotipificación , Adulto Joven
19.
J Vector Borne Dis ; 56(4): 380-382, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-33269740

RESUMEN

A dengue outbreak struck Baranagar municipality area of North 24 Parganas district, West Bengal in July 2016. This study presents the epidemiological and virology findings of this outbreak. The outbreak started from 17 July and continued until 17th December. Total 1660 dengue cases (overall attack rate: 7/1000) and two deaths (case fatality rate: 1/1000) were reported. All age groups were affected. Out of the 213 blood samples collected from probable dengue cases and tested at Virus Unit, ICMR-National Institute of Cholera & Enteric Diseases (NICED), Kolkata, 163 (76%) tested seropositive through NS1 / IgM ELISA confirming dengue infection. DENV 1 was the predominant (53%, 44/83) serotype followed by DENV 2 (23%, 19/83), DENV 4 (15.6%, 13/83), DENV 3 (8.4%,7/ 83). Coexistence of dengue and chikungunya virus infection was detected. Major presentation of the confirmed dengue cases was fever with headache (95%), followed by arthralgia, myalgia, retro-orbital pain, abdominal pain, diarrhoea, and rash. Abundance of vector breeding spaces was observed in the area. Accordingly the health authorities were suggested to conduct frequent mass awareness campaigns involving community to reduce breeding sources during pre-monsoon and monsoon months. Further, adult mosquito control measures were also suggested throughout the year and inter-departmental coordination was recommended for prevention of such outbreaks in future.


Asunto(s)
Virus del Dengue/aislamiento & purificación , Dengue/virología , Adolescente , Adulto , Anticuerpos Antivirales/sangre , Niño , Preescolar , Dengue/sangre , Dengue/epidemiología , Virus del Dengue/clasificación , Virus del Dengue/inmunología , Brotes de Enfermedades , Ensayo de Inmunoadsorción Enzimática , Femenino , Humanos , Incidencia , India/epidemiología , Lactante , Masculino , Persona de Mediana Edad , Serogrupo , Adulto Joven
20.
Emerg Infect Dis ; 24(1): 170-172, 2018 01.
Artículo en Inglés | MEDLINE | ID: mdl-29260685

RESUMEN

We report 1,327 probable cases of dengue in Burkina Faso in 2016. Of 35 serum samples tested by a trioplex test, 19 were confirmed dengue virus (DENV)‒positive: 11 DENV-2, 6 DENV-3, 2 nontypeable, and 1 DENV-2/DENV-3 co-infection. Molecular testing should be conducted to correctly identify causative agents in this complex infectious disease landscape.


Asunto(s)
Dengue/epidemiología , Animales , Burkina Faso/epidemiología , Dengue/transmisión , Virus del Dengue/clasificación , Humanos , Mosquitos Vectores/fisiología , Mosquitos Vectores/virología , Serogrupo , Viaje
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