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1.
Cell ; 184(14): 3731-3747.e21, 2021 07 08.
Artículo en Inglés | MEDLINE | ID: mdl-34214470

RESUMEN

In motor neuroscience, state changes are hypothesized to time-lock neural assemblies coordinating complex movements, but evidence for this remains slender. We tested whether a discrete change from more autonomous to coherent spiking underlies skilled movement by imaging cerebellar Purkinje neuron complex spikes in mice making targeted forelimb-reaches. As mice learned the task, millimeter-scale spatiotemporally coherent spiking emerged ipsilateral to the reaching forelimb, and consistent neural synchronization became predictive of kinematic stereotypy. Before reach onset, spiking switched from more disordered to internally time-locked concerted spiking and silence. Optogenetic manipulations of cerebellar feedback to the inferior olive bi-directionally modulated neural synchronization and reaching direction. A simple model explained the reorganization of spiking during reaching as reflecting a discrete bifurcation in olivary network dynamics. These findings argue that to prepare learned movements, olivo-cerebellar circuits enter a self-regulated, synchronized state promoting motor coordination. State changes facilitating behavioral transitions may generalize across neural systems.


Asunto(s)
Movimiento/fisiología , Red Nerviosa/fisiología , Potenciales de Acción/fisiología , Animales , Calcio/metabolismo , Cerebelo/fisiología , Sincronización Cortical , Miembro Anterior/fisiología , Interneuronas/fisiología , Aprendizaje , Ratones Endogámicos C57BL , Ratones Transgénicos , Modelos Neurológicos , Actividad Motora/fisiología , Núcleo Olivar/fisiología , Optogenética , Células de Purkinje/fisiología , Conducta Estereotipada , Análisis y Desempeño de Tareas
2.
Cell ; 177(4): 925-941.e17, 2019 05 02.
Artículo en Inglés | MEDLINE | ID: mdl-30982601

RESUMEN

The synchronous cleavage divisions of early embryogenesis require coordination of the cell-cycle oscillator, the dynamics of the cytoskeleton, and the cytoplasm. Yet, it remains unclear how spatially restricted biochemical signals are integrated with physical properties of the embryo to generate collective dynamics. Here, we show that synchronization of the cell cycle in Drosophila embryos requires accurate nuclear positioning, which is regulated by the cell-cycle oscillator through cortical contractility and cytoplasmic flows. We demonstrate that biochemical oscillations are initiated by local Cdk1 inactivation and spread through the activity of phosphatase PP1 to generate cortical myosin II gradients. These gradients cause cortical and cytoplasmic flows that control proper nuclear positioning. Perturbations of PP1 activity and optogenetic manipulations of cortical actomyosin disrupt nuclear spreading, resulting in loss of cell-cycle synchrony. We conclude that mitotic synchrony is established by a self-organized mechanism that integrates the cell-cycle oscillator and embryo mechanics.


Asunto(s)
Proteína Quinasa CDC2/metabolismo , Ciclo Celular/fisiología , División del Núcleo Celular/fisiología , Proteínas de Drosophila/metabolismo , Actomiosina/metabolismo , Animales , Núcleo Celular/metabolismo , Citocinesis/fisiología , Citoplasma , Citoesqueleto/metabolismo , Drosophila melanogaster/embriología , Embrión no Mamífero/metabolismo , Desarrollo Embrionario/fisiología , Microtúbulos/metabolismo , Mitosis , Miosina Tipo II/metabolismo , Monoéster Fosfórico Hidrolasas/metabolismo
3.
Proc Natl Acad Sci U S A ; 121(16): e2318155121, 2024 Apr 16.
Artículo en Inglés | MEDLINE | ID: mdl-38602917

RESUMEN

Tissue development occurs through a complex interplay between many individual cells. Yet, the fundamental question of how collective tissue behavior emerges from heterogeneous and noisy information processing and transfer at the single-cell level remains unknown. Here, we reveal that tissue scale signaling regulation can arise from local gap-junction mediated cell-cell signaling through the spatiotemporal establishment of an intermediate-scale of transient multicellular communication communities over the course of tissue development. We demonstrated this intermediate scale of emergent signaling using Ca2+ signaling in the intact, ex vivo cultured, live developing Drosophila hematopoietic organ, the lymph gland. Recurrent activation of these transient signaling communities defined self-organized signaling "hotspots" that gradually formed over the course of larva development. These hotspots receive and transmit information to facilitate repetitive interactions with nonhotspot neighbors. Overall, this work bridges the scales between single-cell and emergent group behavior providing key mechanistic insight into how cells establish tissue-scale communication networks.


Asunto(s)
Proteínas de Drosophila , Drosophila , Animales , Drosophila/metabolismo , Hematopoyesis , Transducción de Señal , Comunicación Celular , Proteínas de Drosophila/genética , Proteínas de Drosophila/metabolismo
4.
Annu Rev Neurosci ; 41: 475-499, 2018 07 08.
Artículo en Inglés | MEDLINE | ID: mdl-29709210

RESUMEN

Rhythmicity is a universal timing mechanism in the brain, and the rhythmogenic mechanisms are generally dynamic. This is illustrated for the neuronal control of breathing, a behavior that occurs as a one-, two-, or three-phase rhythm. Each breath is assembled stochastically, and increasing evidence suggests that each phase can be generated independently by a dedicated excitatory microcircuit. Within each microcircuit, rhythmicity emerges through three entangled mechanisms: ( a) glutamatergic transmission, which is amplified by ( b) intrinsic bursting and opposed by ( c) concurrent inhibition. This rhythmogenic triangle is dynamically tuned by neuromodulators and other network interactions. The ability of coupled oscillators to reconfigure and recombine may allow breathing to remain robust yet plastic enough to conform to nonventilatory behaviors such as vocalization, swallowing, and coughing. Lessons learned from the respiratory network may translate to other highly dynamic and integrated rhythmic systems, if approached one breath at a time.


Asunto(s)
Encéfalo/fisiología , Modelos Neurológicos , Periodicidad , Respiración , Animales , Tronco Encefálico/citología , Tronco Encefálico/fisiología , Humanos , Red Nerviosa/fisiología , Dinámicas no Lineales
5.
Proc Natl Acad Sci U S A ; 120(37): e2303332120, 2023 Sep 12.
Artículo en Inglés | MEDLINE | ID: mdl-37669393

RESUMEN

Synchronization phenomena on networks have attracted much attention in studies of neural, social, economic, and biological systems, yet we still lack a systematic understanding of how relative synchronizability relates to underlying network structure. Indeed, this question is of central importance to the key theme of how dynamics on networks relate to their structure more generally. We present an analytic technique to directly measure the relative synchronizability of noise-driven time-series processes on networks, in terms of the directed network structure. We consider both discrete-time autoregressive processes and continuous-time Ornstein-Uhlenbeck dynamics on networks, which can represent linearizations of nonlinear systems. Our technique builds on computation of the network covariance matrix in the space orthogonal to the synchronized state, enabling it to be more general than previous work in not requiring either symmetric (undirected) or diagonalizable connectivity matrices and allowing arbitrary self-link weights. More importantly, our approach quantifies the relative synchronization specifically in terms of the contribution of process motif (walk) structures. We demonstrate that in general the relative abundance of process motifs with convergent directed walks (including feedback and feedforward loops) hinders synchronizability. We also reveal subtle differences between the motifs involved for discrete or continuous-time dynamics. Our insights analytically explain several known general results regarding synchronizability of networks, including that small-world and regular networks are less synchronizable than random networks.

6.
Proc Natl Acad Sci U S A ; 120(38): e2303765120, 2023 Sep 19.
Artículo en Inglés | MEDLINE | ID: mdl-37695901

RESUMEN

This work reports that synchronization of Mott material-based nanoscale coupled spiking oscillators can be drastically different from that in conventional harmonic oscillators. We investigated the synchronization of spiking nanooscillators mediated by thermal interactions due to the close physical proximity of the devices. Controlling the driving voltage enables in-phase 1:1 and 2:1 integer synchronization modes between neighboring oscillators. Transition between these two integer modes occurs through an unusual stochastic synchronization regime instead of the loss of spiking coherence. In the stochastic synchronization regime, random length spiking sequences belonging to the 1:1 and 2:1 integer modes are intermixed. The occurrence of this stochasticity is an important factor that must be taken into account in the design of large-scale spiking networks for hardware-level implementation of novel computational paradigms such as neuromorphic and stochastic computing.

7.
Cereb Cortex ; 34(7)2024 Jul 03.
Artículo en Inglés | MEDLINE | ID: mdl-39011935

RESUMEN

Companionship refers to one's being in the presence of another individual. For adults, acquiring a new language is a highly social activity that often involves learning in the context of companionship. However, the effects of companionship on new language learning have gone relatively underexplored, particularly with respect to word learning. Using a within-subject design, the current study employs electroencephalography to examine how two types of companionship (monitored and co-learning) affect word learning (semantic and lexical) in a new language. Dyads of Chinese speakers of English as a second language participated in a pseudo-word-learning task during which they were placed in monitored and co-learning companionship contexts. The results showed that exposure to co-learning companionship affected the early attention stage of word learning. Moreover, in this early stage, evidence of a higher representation similarity between co-learners showed additional support that co-learning companionship influenced attention. Observed increases in delta and theta interbrain synchronization further revealed that co-learning companionship facilitated semantic access. In all, the similar neural representations and interbrain synchronization between co-learners suggest that co-learning companionship offers important benefits for learning words in a new language.


Asunto(s)
Encéfalo , Electroencefalografía , Humanos , Masculino , Femenino , Adulto Joven , Adulto , Encéfalo/fisiología , Aprendizaje/fisiología , Semántica , Multilingüismo , Lenguaje , Atención/fisiología , Aprendizaje Verbal/fisiología
8.
Cereb Cortex ; 34(2)2024 01 31.
Artículo en Inglés | MEDLINE | ID: mdl-38300221

RESUMEN

Competition is an essential component of social interaction and is influenced by interpersonal relationships. This study is based on social exchange theory and explores the relationship between brain synchronization and competition in the binary system of romantic relationships through electroencephalogram hyperscanning technology. The results found that females had a greater win rate in the romantic and friend groups. During the early stage (0-200 ms), when the competitive target appeared, the stranger group exhibited greater interbrain synchronicity in the Alpha frequency band. However, during the later stage (600-800 ms), the romantic group showed higher Alpha band interbrain synchrony when the competitive target appeared. Significant interbrain synchronizations were observed in the Theta frequency band of the stranger and friend groups at 400-600 ms and 800-1000 ms. Moreover, these interbrain synchronizations were significantly positively correlated with the winning rates of females in the competition. These findings suggest a close relationship between interpersonal coordination and interbrain synchronization. Furthermore, romantic relationships reduce participants' willingness to compete, affecting their attention regulation, emotional processing, and goal orientation, thus influencing competition. This study investigated the impact of romantic relationships on competition, providing a theoretical foundation for promoting the positive and healthy development of romantic relationships.


Asunto(s)
Encéfalo , Relaciones Interpersonales , Femenino , Humanos , Encéfalo/fisiología , Electroencefalografía , Amigos , Interacción Social
9.
Cereb Cortex ; 34(2)2024 01 31.
Artículo en Inglés | MEDLINE | ID: mdl-38342691

RESUMEN

Third-party punishment occurs in interpersonal interactions to sustain social norms, and is strongly influenced by the characteristics of the interacting individuals. During social interactions, height is the striking physical appearance features first observed, height disadvantage may critically influence men's behavior and mental health. Herein, we explored the influence of height disadvantage on third-party punishment through time-frequency analysis and electroencephalography hyperscanning. Two participants were randomly designated as the recipient and third party after height comparison and instructed to complete third-party punishment task. Compared with when the third party's height is higher than the recipient's height, when the third party's height is lower, the punishment rate and transfer amount were significantly higher. Only for highly unfair offers, the theta power was significantly greater when the third party's height was lower. The inter-brain synchronization between the recipient and the third party was significantly stronger when the third party's height was lower. Compared with the fair and medium unfair offers, the inter-brain synchronization was strongest for highly unfair offers. Our findings indicate that the height disadvantage-induced anger and reputation concern promote third-party punishment and inter-brain synchronization. This study enriches research perspective and expands the application of the theory of Napoleon complex.


Asunto(s)
Electroencefalografía , Castigo , Masculino , Humanos , Castigo/psicología , Relaciones Interpersonales , Interacción Social , Encéfalo
10.
Cereb Cortex ; 34(2)2024 01 31.
Artículo en Inglés | MEDLINE | ID: mdl-38300214

RESUMEN

Previous research on racial ingroup bias in empathy for pain focused on neural responses to a single person's suffering. It is unclear whether empathy for simultaneously perceived multiple individuals' pain (denoted as collective empathy in this study) is also sensitive to perceived racial identities of empathy targets. We addressed this issue by recording electroencephalography from Chinese adults who responded to racial identities of 2 × 2 arrays of Asian or White faces in which 4 faces, 1 face, or no face showed painful expressions. Participants reported greater feelings of others' pain and their own unpleasantness when viewing 4 compared to 1 (or no) painful faces. Behavioral responses to racial identities of faces revealed decreased speeds of information acquisition when responding to the face arrays with 4 (vs. 1 or no) painful expressions of Asian (but not White) faces. Moreover, Asian compared to White face arrays with 4 (vs. 1 or no) painful expressions elicited a larger positive neural response at 160-190 ms (P2) at the frontal/central electrodes and enhanced alpha synchronizations at 288-1,000 ms at the central electrodes. Our findings provide evidence for racial ingroup biases in collective empathy for pain and unravel its relevant neural underpinnings.


Asunto(s)
Empatía , Racismo , Adulto , Humanos , Electroencefalografía , Dolor , Emociones
11.
Cereb Cortex ; 34(13): 104-111, 2024 May 02.
Artículo en Inglés | MEDLINE | ID: mdl-38696603

RESUMEN

Autism is characterized by atypical social communication styles. To investigate whether individuals with high autistic traits could still have effective social communication among each other, we compared the behavioral patterns and communication quality within 64 dyads of college students paired with both high, both low, and mixed high-low (HL) autistic traits, with their gender matched. Results revealed that the high-high (HH) autistic dyads exhibited atypical behavioral patterns during conversations, including reduced mutual gaze, communicational turns, and emotional sharing compared with the low-low and/or HL autistic dyads. However, the HH autistic dyads displayed enhanced interpersonal neural synchronization during social communications measured by functional near-infrared spectroscopy, suggesting an effective communication style. Besides, they also provided more positive subjective evaluations of the conversations. These findings highlight the potential for alternative pathways to effectively communicate with the autistic community, contribute to a deeper understanding of how high autistic traits influence social communication dynamics among autistic individuals, and provide important insights for the clinical practices for supporting autistic people.


Asunto(s)
Trastorno Autístico , Comunicación , Espectroscopía Infrarroja Corta , Humanos , Masculino , Femenino , Adulto Joven , Trastorno Autístico/psicología , Trastorno Autístico/fisiopatología , Relaciones Interpersonales , Conducta Social , Interacción Social , Encéfalo/fisiopatología , Encéfalo/fisiología , Adulto , Sincronización Cortical/fisiología , Adolescente
12.
Cereb Cortex ; 34(2)2024 01 31.
Artículo en Inglés | MEDLINE | ID: mdl-38342689

RESUMEN

Post-movement beta synchronization is an increase of beta power relative to baseline, which commonly used to represent the status quo of the motor system. However, its functional role to the subsequent voluntary motor output and potential electrophysiological significance remain largely unknown. Here, we examined the reaction time of a Go/No-Go task of index finger tapping which performed at the phases of power baseline and post-movement beta synchronization peak induced by index finger abduction movements at different speeds (ballistic/self-paced) in 13 healthy subjects. We found a correlation between the post-movement beta synchronization and reaction time that larger post-movement beta synchronization prolonged the reaction time during Go trials. To probe the electrophysiological significance of post-movement beta synchronization, we assessed intracortical inhibitory measures probably involving GABAB (long-interval intracortical inhibition) and GABAA (short-interval intracortical inhibition) receptors in beta baseline and post-movement beta synchronization peak induced by index finger abduction movements at different speeds. We found that short-interval intracortical inhibition but not long-interval intracortical inhibition increased in post-movement beta synchronization peak compared with that in the power baseline, and was negatively correlated with the change of post-movement beta synchronization peak value. These novel findings indicate that the post-movement beta synchronization is related to forward model updating, with high beta rebound predicting longer time for the preparation of subsequent movement by inhibitory neural pathways of GABAA.


Asunto(s)
Potenciales Evocados Motores , Movimiento , Humanos , Potenciales Evocados Motores/fisiología , Movimiento/fisiología , Tiempo de Reacción/fisiología , Inhibición Psicológica , Inhibición Neural/fisiología
13.
Mol Cell Proteomics ; 22(12): 100675, 2023 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-37940002

RESUMEN

The molecular basis of circadian rhythm, driven by core clock genes such as Per1/2, has been investigated on the transcriptome level, but not comprehensively on the proteome level. Here we quantified over 11,000 proteins expressed in eight types of tissues over 46 h with an interval of 2 h, using WT and Per1/Per2 double knockout mouse models. The multitissue circadian proteome landscape of WT mice shows tissue-specific patterns and reflects circadian anticipatory phenomena, which are less obvious on the transcript level. In most peripheral tissues of double knockout mice, reduced protein cyclers are identified when compared with those in WT mice. In addition, PER1/2 contributes to controlling the anticipation of the circadian rhythm, modulating tissue-specific cyclers as well as key pathways including nucleotide excision repair. Severe intertissue temporal dissonance of circadian proteome has been observed in the absence of Per1 and Per2. The γ-aminobutyric acid might modulate some of these temporally correlated cyclers in WT mice. Our study deepens our understanding of rhythmic proteins across multiple tissues and provides valuable insights into chronochemotherapy. The data are accessible at https://prot-rhythm.prottalks.com/.


Asunto(s)
Ritmo Circadiano , Proteoma , Animales , Ratones , Proteínas Circadianas Period/genética , Especificidad de Órganos , Ratones Noqueados , Reparación por Escisión
14.
Proc Natl Acad Sci U S A ; 119(12): e2115103119, 2022 03 22.
Artículo en Inglés | MEDLINE | ID: mdl-35254873

RESUMEN

Synchronized oscillations are found in all living systems, from cellsto ecosystems and on varying time scales. A generic principlebehind the production of oscillations involves a delay in theresponse of one entity to stimulations from the others in the sys-tem. Communication among entities is required for the emergenceof synchronization, but its efficacy can be impaired by surroundingnoise. In the social spiderAnelosimus eximius, individuals coordi-nate their activity to catch large prey that are otherwise inaccessi-ble to solitary hunters. When hunting in groups, dozens of spidersmove rhythmically toward their prey by synchronizing movingand stopping phases. We proposed a mechanistic model imple-menting individual behavioral rules, all derived fromfield experi-ments, to elucidate the underlying principles of synchronization.We showed that the emergence of oscillations in spiders involvesa refractory state, the duration of which depends on the relativeintensity of prey versus conspecific signals. Thisflexible behaviorallows individuals to rapidly adapt to variations in their vibrationallandscapes. Exploring the model reveals that the benefits of syn-chronization resulting from improved accuracy in prey detectionand reduced latency to capture prey more than offset the cost ofthe delay associated with immobility phases. Overall, our studyshows that a refractory period whose duration is variable anddependent on information accessible to all entities in the systemcontributes to the emergence of self-organized oscillations innoisy environments. Ourfindings may inspire the design of artifi-cial systems requiring fast andflexible synchronization betweentheir components.


Asunto(s)
Conducta Predatoria , Arañas , Animales , Fenómenos Fisiológicos Celulares , Toma de Decisiones , Vibración
15.
Proc Natl Acad Sci U S A ; 119(10): e2120093119, 2022 03 08.
Artículo en Inglés | MEDLINE | ID: mdl-35238656

RESUMEN

SignificanceThe authors propose that odors are consciously perceived or not, depending on whether the olfactory cortex succeeds in activating the endopiriform nucleus-a structure that, in turn, is capable of activating multiple downstream brain areas. The authors further propose that the cellular mechanisms of endopiriform nucleus activation are an attenuated form of cellular events that occur during epileptic seizure initiation. If correct, the authors' hypothesis could help explain the mechanisms of action of certain general anesthetics.


Asunto(s)
Potenciales Evocados , Olfato/fisiología , Animales , Corteza Piriforme/metabolismo , Corteza Piriforme/fisiología , Convulsiones/fisiopatología , Transducción de Señal , Sodio/metabolismo
16.
Proc Natl Acad Sci U S A ; 119(8)2022 02 22.
Artículo en Inglés | MEDLINE | ID: mdl-35177473

RESUMEN

Researchers commonly anneal metals, alloys, and semiconductors to repair defects and improve microstructures via recrystallization. Theoretical studies indicate that simulated annealing on biological macromolecules helps predict the final structures with minimum free energy. Experimental validation of this homogenizing effect and further exploration of its applications are fascinating scientific questions that remain elusive. Here, we chose the apo-state 70S ribosome from Escherichia coli as a model, wherein the 30S subunit undergoes a thermally driven intersubunit rotation and exhibits substantial structural flexibility as well as distinct free energy. We experimentally demonstrate that annealing at a fast cooling rate enhances the 70S ribosome homogeneity and improves local resolution on the 30S subunit. After annealing, the 70S ribosome is in a nonrotated state with respect to corresponding intermediate structures in unannealed or heated ribosomes. Manifold-based analysis further indicates that the annealed 70S ribosome takes a narrow conformational distribution and exhibits a minimum-energy state in the free-energy landscape. Our experimental results offer a facile yet robust approach to enhance protein stability, which is ideal for high-resolution cryogenic electron microscopy. Beyond structure determination, annealing shows great potential for synchronizing proteins on a single-molecule level and can be extended to study protein folding and explore conformational and energy landscapes.


Asunto(s)
Conformación Proteica , Proteínas Ribosómicas/ultraestructura , Ribosomas/fisiología , Microscopía por Crioelectrón , Escherichia coli/metabolismo , Proteínas de Escherichia coli/metabolismo , Modelos Moleculares , ARN Ribosómico/metabolismo , ARN Ribosómico/ultraestructura , Proteínas Ribosómicas/metabolismo , Ribosomas/ultraestructura
17.
Proc Natl Acad Sci U S A ; 119(34): e2202515119, 2022 08 23.
Artículo en Inglés | MEDLINE | ID: mdl-35981139

RESUMEN

Marital attachment plays an important role in maintaining intimate personal relationships and sustaining psychological well-being. Mate-selection theories suggest that people are more likely to marry someone with a similar personality and social status, yet evidence for the association between personality-based couple similarity measures and marital satisfaction has been inconsistent. A more direct and useful approach for understanding fundamental processes underlying marital satisfaction is to probe similarity of dynamic brain responses to maritally and socially relevant communicative cues, which may better reflect how married couples process information in real time and make sense of their mates and themselves. Here, we investigate shared neural representations based on intersubject synchronization (ISS) of brain responses during free viewing of marital life-related, and nonmarital, object-related movies. Compared to randomly selected pairs of couples, married couples showed significantly higher levels of ISS during viewing of marital movies and ISS between married couples predicted higher levels of marital satisfaction. ISS in the default mode network emerged as a strong predictor of marital satisfaction and canonical correlation analysis revealed a specific relation between ISS in this network and shared communication and egalitarian components of martial satisfaction. Our findings demonstrate that brain similarities that reflect real-time mental responses to subjective perceptions, thoughts, and feelings about interpersonal and social interactions are strong predictors of marital satisfaction, reflecting shared values and beliefs. Our study advances foundational knowledge of the neurobiological basis of human pair bonding.


Asunto(s)
Encéfalo , Matrimonio , Satisfacción Personal , Encéfalo/fisiología , Comunicación , Humanos , Relaciones Interpersonales , Matrimonio/psicología , Personalidad , Esposos/psicología
18.
Proc Natl Acad Sci U S A ; 119(49): e2113504119, 2022 12 06.
Artículo en Inglés | MEDLINE | ID: mdl-36454750

RESUMEN

Alternative polyadenylation (APA) plays an important role in posttranscriptional gene regulation such as transcript stability and translation efficiency. However, our knowledge about APA dynamics at the single-cell level is largely unexplored. Here, we developed single-cell polyadenylation sequencing, a strand-specific approach for sequencing the 3' end of transcripts, to investigate the landscape of APA at the single-cell level. By analyzing several cell lines, we found many genes using multiple polyA sites in bulk data are prone to use only one polyA site in each single cell. Interestingly, cell cycle genes were significantly enriched in genes with high variation in polyA site usages. Furthermore, the 414 genes showing a polyA site usage switch after cell synchronization enriched cell cycle genes, while the differentially expressed genes after cell synchronization did not enrich cell cycle genes. We further identified 812 genes showing polyA site usage changes between neighboring cell cycles, which were grouped into six clusters, with cell phase-specific functional categories enriched in each cluster. Deletion of one polyA site in MSL1 and SCCPDH results in slower and faster cell cycle progression, respectively, supporting polyA site usage switch played an important role in cell cycle. These results indicate that APA is an important layer for cell cycle regulation.


Asunto(s)
Poli A , Poliadenilación , Poliadenilación/genética , Genes cdc , Ciclo Celular/genética , División Celular
19.
Genes Dev ; 31(5): 524-535, 2017 03 01.
Artículo en Inglés | MEDLINE | ID: mdl-28373207

RESUMEN

Cells communicate with each other to coordinate their gene activities at the population level through signaling pathways. It has been shown that many gene activities are oscillatory and that the frequency and phase of oscillatory gene expression encode various types of information. However, whether or how such oscillatory information is transmitted from cell to cell remains unknown. Here, we developed an integrated approach that combines optogenetic perturbations and single-cell bioluminescence imaging to visualize and reconstitute synchronized oscillatory gene expression in signal-sending and signal-receiving processes. We found that intracellular and intercellular periodic inputs of Notch signaling entrain intrinsic oscillations by frequency tuning and phase shifting at the single-cell level. In this way, the oscillation dynamics are transmitted through Notch signaling, thereby synchronizing the population of oscillators. Thus, this approach enabled us to control and monitor dynamic cell-to-cell transfer of oscillatory information to coordinate gene expression patterns at the population level.


Asunto(s)
Comunicación Celular/fisiología , Mediciones Luminiscentes , Optogenética , Transducción de Señal , Análisis de la Célula Individual/métodos , Animales , Línea Celular , Regulación de la Expresión Génica , Ratones , Receptores Notch/metabolismo
20.
J Neurosci ; 43(28): 5204-5220, 2023 07 12.
Artículo en Inglés | MEDLINE | ID: mdl-37328291

RESUMEN

Fast gamma oscillations, generated within the retina, and transmitted to the cortex via the lateral geniculate nucleus (LGN), are thought to carry information about stimulus size and continuity. This hypothesis relies mainly on studies conducted under anesthesia and the extent to which it holds under more naturalistic conditions remains unclear. Using multielectrode recordings of spiking activity in the retina and the LGN of both male and female cats, we show that visually driven gamma oscillations are absent for awake states and are highly dependent on halothane (or isoflurane). Under ketamine, responses were nonoscillatory, as in the awake condition. Response entrainment to the monitor refresh was commonly observed up to 120 Hz and was superseded by the gamma oscillatory responses induced by halothane. Given that retinal gamma oscillations are contingent on halothane anesthesia and absent in the awake cat, such oscillations should be considered artifactual, thus playing no functional role in vision.SIGNIFICANCE STATEMENT Gamma rhythms have been proposed to be a robust encoding mechanism critical for visual processing. In the retinogeniculate system of the cat, many studies have shown gamma oscillations associated with responses to static stimuli. Here, we extend these observations to dynamic stimuli. An unexpected finding was that retinal gamma responses strongly depend on halothane concentration levels and are absent in the awake cat. These results weaken the notion that gamma in the retina is relevant for vision. Notably, retinal gamma shares many of the properties of cortical gamma. In this respect, oscillations induced by halothane in the retina may serve as a valuable preparation, although artificial, for studying oscillatory dynamics.


Asunto(s)
Ritmo Gamma , Halotano , Masculino , Femenino , Animales , Retina/fisiología , Cuerpos Geniculados/fisiología , Visión Ocular , Estimulación Luminosa/métodos
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