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1.
Fish Shellfish Immunol ; 127: 740-747, 2022 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-35792346

RESUMEN

This study investigated the synergistic effects of oxolinic acid (OA) combined with oxytetracycline (OTC) on white shrimp (Penaeus vannamei). Disk diffusion susceptibility testing was performed to analyze the sensitivity of Vibrio alginolyticus and Vibrio parahaemolyticus to different concentrations of OA and OTC. The results revealed that 50 mg OA/L combined with 50 mg OTC/L exhibited stronger antibacterial effects on V. alginolyticus and V. parahaemolyticus. The results of in vitro tests indicated that cotreatment with OA and OTC significantly reduced superoxide anion production and phenoloxidase activity, but not phagocytic activity. Subsequently, feeding trials were performed to investigate the immunomodulatory effects and bioaccumulation of dietary OA combined with OTC on shrimp. The healthy shrimp (15.13 ± 1.02 g) were divided into four groups: control, 100 mg OA/kg combined with 50 mg OTC/kg, 50 mg OA/kg combined with 100 mg OTC/kg, and 50 mg OA/kg combined with 50 mg OTC/kg. The shrimp were sampled to determine innate immunity parameters and residual OA and OTC levels in the muscle during a 28-day feeding regimen; the shrimp were fed the experimental diet from day 1 to day 5 and a commercial diet from day 6 to day 28. Residual OA levels were considerably higher in the group fed 100 mg OA/kg combined with 50 mg OTC/kg compared with the other groups and peaked on day 4. The residual OA levels of all the groups were below the detection limit after without providing OA. The residual OTC levels of the group fed 50 mg OA/kg combined with 100 mg OTC/kg were considerably higher from day 1 to day 4. The residual OTC levels in all the groups decreased rapidly and could not be detected on day 28. The administration of 50 mg OA/kg combined with 100 mg OTC/kg exerted the least effect on the white shrimp. Moreover, the survival rates of the treatment groups after the V. parahaemolyticus challenge were higher than those of the control group, especially the group fed 50 mg OA/kg combined with 100 mg OTC/kg. This result indicated that the synergistic effects of dietary OA and OTC are safe and effective. Combination therapy is a new method of antibiotic use in aquaculture.


Asunto(s)
Oxitetraciclina , Penaeidae , Vibriosis , Vibrio parahaemolyticus , Animales , Dieta/veterinaria , Inmunidad Innata , Ácido Oxolínico/farmacología
2.
J Fish Dis ; 44(7): 979-985, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33749839

RESUMEN

Standard disc diffusion and MIC test procedure were used to investigate the susceptibility of two hundred and fifty-one isolates collected from infected fish in France to florfenicol, oxolinic acid and tetracycline. The tests were performed at 22 ± 2℃ and for the 177 Yersinia ruckeri they were read after 24-28 hr incubation and for the 74 Aeromonas salmonicida isolates they were read after 44-48 hr. Applying epidemiological cut-off values to the susceptibility data generated in these tests, the isolates were categorized as wild-type or non-wild-type. The agent-specific categories into each isolate were placed on the basis of the data generated by the two methods were in agreement in 98% of the determinations made. It is argued that, with respect to categorising isolates, disc diffusion and MIC methods can be considered as equally valid at this temperature and after both periods of incubation.


Asunto(s)
Aeromonas salmonicida/efectos de los fármacos , Antibacterianos/farmacología , Yersinia ruckeri/efectos de los fármacos , Farmacorresistencia Bacteriana , Pruebas de Sensibilidad Microbiana , Ácido Oxolínico/farmacología , Tetraciclina/farmacología , Tianfenicol/análogos & derivados , Tianfenicol/farmacología
3.
Molecules ; 25(22)2020 Nov 19.
Artículo en Inglés | MEDLINE | ID: mdl-33228104

RESUMEN

"Drug repositioning" is a current trend which proved useful in the search for new applications for existing, failed, no longer in use or abandoned drugs, particularly when addressing issues such as bacterial or cancer cells resistance to current therapeutic approaches. In this context, six new complexes of the first-generation quinolone oxolinic acid with rare-earth metal cations (Y3+, La3+, Sm3+, Eu3+, Gd3+, Tb3+) have been synthesized and characterized. The experimental data suggest that the quinolone acts as a bidentate ligand, binding to the metal ion via the keto and carboxylate oxygen atoms; these findings are supported by DFT (density functional theory) calculations for the Sm3+ complex. The cytotoxic activity of the complexes, as well as the ligand, has been studied on MDA-MB 231 (human breast adenocarcinoma), LoVo (human colon adenocarcinoma) and HUVEC (normal human umbilical vein endothelial cells) cell lines. UV-Vis spectroscopy and competitive binding studies show that the complexes display binding affinities (Kb) towards double stranded DNA in the range of 9.33 × 104 - 10.72 × 105. Major and minor groove-binding most likely play a significant role in the interactions of the complexes with DNA. Moreover, the complexes bind human serum albumin more avidly than apo-transferrin.


Asunto(s)
Antibacterianos/farmacología , Complejos de Coordinación/síntesis química , Complejos de Coordinación/farmacología , ADN/metabolismo , Metales de Tierras Raras/farmacología , Ácido Oxolínico/síntesis química , Ácido Oxolínico/farmacología , Muerte Celular/efectos de los fármacos , Línea Celular Tumoral , Complejos de Coordinación/química , Teoría Funcional de la Densidad , Fluorescencia , Células Endoteliales de la Vena Umbilical Humana/efectos de los fármacos , Humanos , Concentración 50 Inhibidora , Cinética , Metales de Tierras Raras/química , Conformación Molecular , Ácido Oxolínico/química , Unión Proteica/efectos de los fármacos , Albúmina Sérica Humana/química , Espectrofotometría Ultravioleta , Espectroscopía Infrarroja por Transformada de Fourier , Temperatura
4.
Dis Aquat Organ ; 108(1): 11-21, 2014 Feb 04.
Artículo en Inglés | MEDLINE | ID: mdl-24492050

RESUMEN

The granuloma disease caused by Francisella noatunensis subsp. noatunensis in farmed Atlantic cod has not been successfully treated by use of antibacterials, even when antibacterial resistance testing indicates a sufficient effect. The reason for this treatment failure may be the intracellular existence of the bacteria within immune cells, mainly macrophages. To investigate the effect of antibacterials on intracellular Francisella replication, we established a protocol for the detection of drugs within Atlantic cod immune cells using high-performance liquid chromatography (HPLC). When the uptake and intracellular concentrations of oxolinic acid and flumequine were analysed in isolated adherent head kidney leucocytes (HKLs) by HPLC, we found that uptake was rapid and the intracellular concentrations reflected the extracellular exposure concentrations. To investigate the effect of the antibacterial compounds on intracellular bacterial replication, adherent HKLs experimentally infected with the bacteria were analysed using flow cytometry and intracellular labelling of bacteria by specific antibodies. We found that flumequine did not inhibit intracellular bacterial replication. Unexpectedly, the results indicated that the intracellularly effiacy of the drug was reduced. The HPLC method used proved to be highly applicable for accurate determination of intracellular drug concentrations. When combined with sensitive and specific flow cytometry analyses for identification and measurement of intracellular bacterial replication, we suggest that this approach can be very valuable for the design of antibacterial treatments of intracellular pathogens.


Asunto(s)
Fluoroquinolonas/metabolismo , Francisella/fisiología , Gadus morhua , Leucocitos/metabolismo , Ácido Oxolínico/metabolismo , Animales , Antibacterianos/metabolismo , Antibacterianos/farmacología , División Celular/efectos de los fármacos , Células Cultivadas , Fluoroquinolonas/farmacología , Ácido Oxolínico/farmacología
5.
Antimicrob Agents Chemother ; 57(11): 5755-9, 2013 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-23979754

RESUMEN

Antimicrobial lethality is promoted by reactive oxygen species (ROS), such as superoxide, peroxide, and hydroxyl radical. Pretreatment with subinhibitory concentrations of plumbagin or paraquat, metabolic generators of superoxide, paradoxically reduced killing for oxolinic acid, kanamycin, and ampicillin. These pretreatments also reduced an oxolinic acid-mediated ROS surge. Defects in SoxS MarA or AcrB eliminated plumbagin- and paraquat-mediated MIC increases but maintained protection from killing. Thus, superoxide has both protective and detrimental roles in response to antimicrobial stress.


Asunto(s)
Ampicilina/farmacología , Antibacterianos/farmacología , Escherichia coli K12/efectos de los fármacos , Regulación Bacteriana de la Expresión Génica , Kanamicina/farmacología , Ácido Oxolínico/farmacología , Superóxidos/farmacología , Proteínas de Unión al ADN/genética , Proteínas de Unión al ADN/metabolismo , Relación Dosis-Respuesta a Droga , Farmacorresistencia Bacteriana/genética , Escherichia coli K12/genética , Escherichia coli K12/metabolismo , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Pruebas de Sensibilidad Microbiana , Proteínas Asociadas a Resistencia a Múltiples Medicamentos/genética , Proteínas Asociadas a Resistencia a Múltiples Medicamentos/metabolismo , Naftoquinonas/química , Paraquat/química , Superóxidos/química , Transactivadores/genética , Transactivadores/metabolismo
6.
J Antimicrob Chemother ; 65(3): 520-4, 2010 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-20067982

RESUMEN

BACKGROUND: Quinolone-mediated death of Escherichia coli has been proposed to occur by two pathways. One is blocked by inhibitors of protein synthesis; the other is not. It is currently unknown how these two pathways fit with the recent observation that hydroxyl radical accumulation is associated with quinolone lethality. METHODS: E. coli was treated with thiourea plus 2,2'-bipyridyl to block hydroxyl radical accumulation, and the effect on quinolone lethality was measured for quinolones that distinguished the two lethal pathways: oxolinic acid requires protein synthesis to kill E. coli, while PD161144, a C-8-methoxy fluoroquinolone, does not. The lethal activity of another fluoroquinolone, moxifloxacin, was partially blocked by the presence of chloramphenicol, an inhibitor of protein synthesis. That feature made it possible to determine whether the effects of chloramphenicol and thiourea plus 2,2'-bipyridyl were additive. RESULTS: Lethal activity of oxolinic acid was completely blocked by thiourea plus 2,2'-bipyridyl and by chloramphenicol. In contrast, PD161144 lethality was unaffected by these treatments. With moxifloxacin, both chloramphenicol and thiourea plus 2,2'-bipyridyl separately exhibited the same partial inhibition of quinolone lethality. No additivity in protection from moxifloxacin lethality was observed when thiourea, 2,2'-bipyridyl and chloramphenicol were combined and compared with the effect of chloramphenicol or thiourea plus 2,2'-bipyridyl used separately. CONCLUSIONS: Inhibitor studies indicated that hydroxyl radical action contributes to quinolone-mediated cell death occurring via the chloramphenicol-sensitive lethal pathway but not via the chloramphenicol-insensitive pathway.


Asunto(s)
Antibacterianos/farmacología , Escherichia coli/efectos de los fármacos , Escherichia coli/metabolismo , Viabilidad Microbiana/efectos de los fármacos , Quinolonas/farmacología , Especies Reactivas de Oxígeno/metabolismo , Especies Reactivas de Oxígeno/toxicidad , 2,2'-Dipiridil/farmacología , Compuestos Aza/farmacología , Cloranfenicol/farmacología , Fluoroquinolonas , Moxifloxacino , Ácido Oxolínico/farmacología , Quinolinas/farmacología
7.
Science ; 213(4506): 455-6, 1981 Jul 24.
Artículo en Inglés | MEDLINE | ID: mdl-7017932

RESUMEN

Nalidixic acid and novobiocin inhibit the aminoacylation and pyrophosphate exchange activities of glycyl- and leucyl-transfer RNA synthetases from bakers' yeast. Similar types of inhibition are observed for both enzymes, suggesting similar mechanisms. The potency of these inhibitors is comparable to that observed for their inhibition of in vivo DNA synthesis in eukaryotic cells.


Asunto(s)
Aminoacil-ARNt Sintetasas/antagonistas & inhibidores , Glicina-ARNt Ligasa/antagonistas & inhibidores , Leucina-ARNt Ligasa/antagonistas & inhibidores , Ácido Nalidíxico/farmacología , Novobiocina/farmacología , Ácido Oxolínico/farmacología , Saccharomyces cerevisiae/enzimología , Cinética
8.
Science ; 207(4434): 953-60, 1980 Feb 29.
Artículo en Inglés | MEDLINE | ID: mdl-6243420

RESUMEN

Negative supercoiling of bacterial DNA by DNA gyrase influences all metabolic processes involving DNA and is essential for replication. Gyrase supercoils DNA by a mechanism called sign inversion, whereby a positive supercoil is directly inverted to a negative one by passing a DNA segment through a transient double-strand break. Reversal of this scheme relaxes DNA, and this mechanism also accounts for the ability of gyrase to catenate and uncatenate DNA rings. Each round of supercoiling is driven by a conformational change induced by adenosine triphosphate (ATP) binding: ATP hydrolysis permits fresh cycles. The inhibition of gyrase by two classes of antimicrobials reflects its composition from two reversibly associated subunits. The A subunit is particularly associated with the concerted breakage-and-rejoining of DNA and the B subunit mediates energy transduction. Gyrase is a prototype for a growing class of prokaryotic and eukaryotic topoisomerases that interconvert complex forms by way of transient double-strand breaks.


Asunto(s)
ADN-Topoisomerasas de Tipo II/metabolismo , ADN Superhelicoidal/metabolismo , Adenosina Trifosfatasas/metabolismo , Animales , ADN-Topoisomerasas de Tipo I/metabolismo , ADN-Topoisomerasas de Tipo II/genética , Escherichia coli/enzimología , Células Eucariotas/enzimología , Genes , Sustancias Macromoleculares , Ácido Nalidíxico/farmacología , Novobiocina/farmacología , Ácido Oxolínico/farmacología , Especificidad por Sustrato , Inhibidores de Topoisomerasa II
9.
FEMS Microbiol Ecol ; 55(3): 439-48, 2006 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-16466383

RESUMEN

The consequences of antibiotic use in aquatic integrated systems, which are based on trophic interactions between different cultured organisms and physical continuity through water, need to be examined. In this study, fish reared in a prototype marine integrated system were given an oxolinic acid treatment, during and after which the level of resistance to this quinolone antibiotic was monitored among vibrio populations from the digestive tracts of treated fish, co-cultured bivalves and sediments that were isolated on thiosulfate-citrate-bile-sucrose. Oxolinic acid minimum inhibitory concentration distributions obtained from replica plating of thiosulfate-citrate-bile-sucrose plates indicated that a selection towards oxolinic acid resistance had occurred in the intestines of fish under treatment. In contrast, and despite oxolinic acid concentrations higher than minimum inhibitory concentrations of susceptible bacteria, no clear evolution of resistance levels was detected either in bivalves or in sediments.


Asunto(s)
Antibacterianos/farmacología , Acuicultura , Lubina/microbiología , Farmacorresistencia Bacteriana , Ácido Oxolínico/farmacología , Agua de Mar , Vibrio/efectos de los fármacos , Animales , Lubina/crecimiento & desarrollo , Bivalvos/crecimiento & desarrollo , Bivalvos/microbiología , Intestinos/microbiología , Pruebas de Sensibilidad Microbiana , Ostreidae/crecimiento & desarrollo , Ostreidae/microbiología , Agua de Mar/microbiología , Vibrio/crecimiento & desarrollo , Vibrio/aislamiento & purificación
10.
J Inorg Biochem ; 100(11): 1764-73, 2006 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-16904184

RESUMEN

The neutral mononuclear copper complexes with the quinolone antibacterial drug oxolinic acid in the presence or not of a nitrogen donor heterocyclic ligand 1,10-phenanthroline, 2,2'-bipyridine or 2,2'-dipyridylamine have been synthesized and characterized with infrared, UV-visible and electron paramagnetic resonance spectroscopies. The experimental data suggest that oxolinic acid acts as a deprotonated bidentate ligand and is coordinated to the metal ion through the pyridone and one carboxylate oxygen atoms. The crystal structure of (chloro)(1,10-phenanthroline)(oxolinato) copper(II), 2, has been determined with X-ray crystallography. For all complexes a distorted square pyramidal environment around Cu(II) is suggested. The EPR (electron paramagnetic resonance) behavior of 2 in aqueous solutions indicates mixture of dimeric and monomeric species. The investigation of the interaction of the complexes with calf-thymus DNA has been performed with diverse spectroscopic techniques and showed that the complexes are bound to calf-thymus DNA. The antimicrobial activity of the complexes has been tested on three different microorganisms. The complexes show a decreased biological activity in comparison to the free oxolinic acid.


Asunto(s)
Cobre/química , Compuestos Organometálicos/química , Ácido Oxolínico/química , Animales , Bacterias/efectos de los fármacos , Bovinos , Dicroismo Circular , Cobre/farmacología , ADN/química , Espectroscopía de Resonancia por Spin del Electrón , Pruebas de Sensibilidad Microbiana , Modelos Moleculares , Estructura Molecular , Compuestos Organometálicos/síntesis química , Compuestos Organometálicos/farmacología , Ácido Oxolínico/síntesis química , Ácido Oxolínico/farmacología , Espectrofotometría Ultravioleta
11.
Annu Rev Phytopathol ; 40: 443-65, 2002.
Artículo en Inglés | MEDLINE | ID: mdl-12147767

RESUMEN

Antibiotics have been used since the 1950s to control certain bacterial diseases of high-value fruit, vegetable, and ornamental plants. Today, the antibiotics most commonly used on plants are oxytetracycline and streptomycin. In the USA, antibiotics applied to plants account for less than 0.5% of total antibiotic use. Resistance of plant pathogens to oxytetracycline is rare, but the emergence of streptomycin-resistant strains of Erwinia amylovora, Pseudomonas spp., and Xanthomonas campestris has impeded the control of several important diseases. A fraction of streptomycin-resistance genes in plant-associated bacteria are similar to those found in bacteria isolated from humans, animals, and soil, and are associated with transfer-proficient elements. However, the most common vehicles of streptomycin-resistance genes in human and plant pathogens are genetically distinct. Nonetheless, the role of antibiotic use on plants in the antibiotic-resistance crisis in human medicine is the subject of debate.


Asunto(s)
Agricultura/métodos , Antibacterianos/farmacología , Productos Agrícolas/efectos de los fármacos , Enfermedades de las Plantas/microbiología , Agricultura/estadística & datos numéricos , Bacterias/efectos de los fármacos , Bacterias/genética , Productos Agrícolas/microbiología , Farmacorresistencia Bacteriana/genética , Frutas/efectos de los fármacos , Frutas/microbiología , Gentamicinas/farmacología , Mutación , Ácido Oxolínico/farmacología , Oxitetraciclina/farmacología , Estreptomicina/farmacología , Verduras/efectos de los fármacos , Verduras/microbiología
12.
Cancer Res ; 58(6): 1260-7, 1998 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-9515814

RESUMEN

Various antitumor and antibacterial agents target type II DNA topoisomerases, stabilizing a cleaved DNA reaction intermediate and thereby converting topoisomerase into a cellular poison. Two 4'-(9-acridinylamino)methanesulfon-m-anisidide (m-AMSA)-resistant bacteriophage T4 topoisomerases have previously been characterized biochemically, and we have now determined the sequence of the causative mutations. In one case, a mutation (E457K) in a conserved domain of gp39 (ATPase subunit) causes resistance to antitumor agent m-AMSA but hypersensitivity to the quinolone oxolinic acid. In the second case, a combination of two amino acid substitutions (S79F and G269V) in gp52 (DNA-cleaving subunit) causes resistance to both m-AMSA and oxolinic acid. The S79F mutation is responsible for drug resistance, whereas the G269V mutation suppresses a topoisomerase deficiency caused by S79F. Surprisingly, the G269V mutation by itself causes a dramatic hypersensitivity to both inhibitors, defining a new class of topoisomerase mutants. Because S79 and the adjacent N78 are homologous to two key residues of DNA gyrase that affect quinolone sensitivity, we generated additional amino acid substitutions at these two positions. The substitutions alter sensitivity to m-AMSA and to oxolinic acid, sometimes in opposite directions. Furthermore, the quinolone sensitivities of the various mutants paralleled those of corresponding gyrase mutants. These results support models in which both quinolones and antitumor agents bind to a conserved site that overlaps the active site of the enzyme.


Asunto(s)
Amsacrina/farmacología , Antineoplásicos/farmacología , Bacteriófago T4/enzimología , Inhibidores Enzimáticos/farmacología , Ácido Oxolínico/farmacología , Inhibidores de Topoisomerasa II , Secuencia de Aminoácidos , Bacteriófago T4/genética , ADN-Topoisomerasas de Tipo II/genética , Farmacorresistencia Microbiana , Mutación Puntual , Relación Estructura-Actividad
13.
Cancer Res ; 48(14): 3932-8, 1988 Jul 15.
Artículo en Inglés | MEDLINE | ID: mdl-2838165

RESUMEN

Exposure of HeLa or Chinese hamster ovary cells to drugs (novobiocin, nalidixic acid, or oxolinic acid) which inhibit the nuclear enzyme topoisomerase II resulted in a sensitization of both cell lines to hyperthermic heating at 41 and 45 degrees C. Exposure to 0.5 mg/ml novobiocin decreased the reciprocal slope (T0) of the survival curve of HeLa cells heated at 41 and 45 degrees C by a factor of 7.5 and 2.4, respectively. Exposure to 0.5 mg/ml novobiocin decreased the T0 of the survival curve of Chinese hamster ovary cells heated at 41 and 45 degrees C by a factor of 9.8 and 1.8, respectively. Exposure of HeLa cells to 0.5 mg/ml novobiocin delayed thermotolerance development for 1.5 h and depressed by a factor of 27 the survival of cells heated at 45 degrees C once thermotolerance had developed. Coincident with the sensitization to heat-induced cytotoxicity, an enhancement of a heat-induced increase in the total protein mass co-isolating with the nuclei or nuclear matrices from heated cells was observed. A log-linear correlation was found between the reduction in cell survival and the relative nuclear matrix protein mass increase in cells heated at 41 or 45 degrees C in the presence or absence of these drugs. The results are consistent with the notion that exposure to these drugs disrupts the cell's capacity to regulate nuclear structure and composition, and thus enhances heat-induced cytotoxicity.


Asunto(s)
Supervivencia Celular , Calor , Inhibidores de Topoisomerasa II , Animales , Línea Celular , Cricetinae , Cricetulus , Femenino , Células HeLa/efectos de los fármacos , Humanos , Ácido Nalidíxico/farmacología , Novobiocina/farmacología , Nucleoproteínas/metabolismo , Ovario/efectos de los fármacos , Ácido Oxolínico/farmacología
14.
Biochim Biophys Acta ; 910(1): 21-6, 1987 Oct 09.
Artículo en Inglés | MEDLINE | ID: mdl-2820496

RESUMEN

The polyamine content of the Escherichia coli polyamine-auxotrophic strain BGA 8 seemed to influence the effects of nalidixic acid, an antibiotic acting on subunit A of DNA gyrase. The growth rate was more affected under conditions of putrescine depletion and the inhibition could be partially relieved if the polycation was added back to the culture. DNA synthesis was likewise more sensitive to nalidixic acid in cultures grown without polyamine. The expression of some proteins characteristic of the heat-shock response, evoked by the antibiotic, showed a different persistence according to the presence or absence of polyamines. Novobiocin, acting on subunit B of gyrase, also promoted a differential effect depending on the polyamine content, but in this case putrescine-supplemented cells were more sensitive. The described findings suggest a role of polyamines in all the reactions carried out by gyrase, perhaps due to the influence of the polycations on the state of DNA aggregation.


Asunto(s)
Escherichia coli/crecimiento & desarrollo , Ácido Nalidíxico/farmacología , Poliaminas/fisiología , Inhibidores de Topoisomerasa II , ADN Bacteriano/biosíntesis , Escherichia coli/efectos de los fármacos , Escherichia coli/genética , Proteínas de Choque Térmico/biosíntesis , Novobiocina/farmacología , Ácido Oxolínico/farmacología , Putrescina/fisiología
15.
Biochim Biophys Acta ; 740(4): 417-27, 1983 Sep 09.
Artículo en Inglés | MEDLINE | ID: mdl-6309236

RESUMEN

Using isolated rat liver mitochondria, which have previously been shown to carry out true replicative DNA synthesis, we have obtained results which are in accord with the presence and functioning of a DNA gyrase in this organelle. The effects of the Escherichia coli DNA gyrase inhibitors, novobiocin, coumermycin, nalidixic acid and oxolinic acid, upon mtDNA replication suggest the involvement of the putative mitochondrial enzyme in various aspects of this process. First, the preferential inhibition of [3H]dATP incorporation into highly supercoiled DNA together with the appearance of labeled, relaxed DNA are consistent with the involvement of a gyrase in the process of generating negative supercoils in mature mtDNA. Second, the overall depression of incorporation of labeled dATP into mtDNA, including the reduction of radioactivity incorporated into replicative intermediates, suggests a 'swivelase' role for the putative gyrase, and this hypothesis is further supported by results obtained on sucrose gradient centrifugation of heat-denatured, D-loop mtDNA. Here, the synthesis of the completed clean circles is inhibited while 9 S initiator strand synthesis is not, suggesting that chain elongation is blocked by the gyrase inhibitors.


Asunto(s)
Antibacterianos/farmacología , Replicación del ADN/efectos de los fármacos , ADN Mitocondrial/genética , Mitocondrias Hepáticas/metabolismo , Inhibidores de Topoisomerasa II , Aminocumarinas , Animales , Cumarinas/farmacología , ADN Mitocondrial/aislamiento & purificación , ADN Superhelicoidal/genética , Escherichia coli/enzimología , Mitocondrias Hepáticas/efectos de los fármacos , Peso Molecular , Ácido Nalidíxico/farmacología , Novobiocina/farmacología , Ácido Oxolínico/farmacología , Ratas
16.
J Mol Biol ; 181(4): 545-50, 1985 Feb 20.
Artículo en Inglés | MEDLINE | ID: mdl-2987505

RESUMEN

We have developed a procedure which permits the mapping of DNA gyrase cleavage sites in vivo. Addition of oxolinic acid, an inhibitor of DNA gyrase, to growing cells of Escherichia coli containing the plasmid pBR322 resulted in double-strand cleavage of DNA, and allowed the isolation of significant quantities of linearized plasmid DNA after lysis of treated cells with sodium dodecyl sulfate. Initially the linear product was purified from agarose gels, cleaved by restriction endonucleases, and then subjected to Southern hybridization analysis using defined DNA probes. A number of distinct cleavage sites, used with varying degrees of efficiency, were identified within pBR322 using this simple procedure. To achieve greater resolution and to improve sensitivity, we then employed an electroblotting procedure to transfer DNA fragments from acrylamide gels onto nylon membranes. This alternative method does not require the isolation of the linearized product before performing the mapping procedure. The improved resolution obtained from acrylamide gels and the superior binding properties of the nylon membranes have allowed us to accurately map 74 distinct oxolinic acid-induced cleavage sites within pBR322. The significance of these findings in light of previously reported studies in vitro, as well as the possible role of such sites during illegitimate recombination, are discussed.


Asunto(s)
ADN Bacteriano/metabolismo , Escherichia coli/genética , Ácido Oxolínico/farmacología , Plásmidos , Inhibidores de Topoisomerasa II , Mapeo Cromosómico , Electroforesis en Gel de Agar , Escherichia coli/enzimología , Hibridación de Ácido Nucleico
17.
J Mol Biol ; 190(3): 329-41, 1986 Aug 05.
Artículo en Inglés | MEDLINE | ID: mdl-3023639

RESUMEN

The degradation of host DNA, and the block to transcription of cytosine-containing DNA, which are a part of the normal course of infection by bacteriophage T4, can be eliminated in an appropriate T4 genetic background (designated as our reference type, or r.t.), so that T4 late promoters carried on plasmid DNA can function. The changes of topoisomer distribution that ensue when phage T4 r.t. infect Escherichia coli carrying a plasmid containing a T4 late promoter were analyzed. The linking number of the covalently closed circular plasmid DNA increased (implying relaxation) at the same time as the distribution of topoisomers became much broader. The relaxation of plasmid DNA was primarily, but not exclusively, due to T4 DNA topoisomerase II. The bacterial DNA topoisomerase II (gyrase) continued to function after phage infection to maintain some degree of superhelicity in plasmid DNA. When the DNA gyrase was inhibited by coumermycin or oxolinic acid, the topoisomer distribution became distinctly bimodal, part of the DNA remaining highly negatively supercoiled. It is argued that the observed post-infection topological changes involve relaxation of torsional stress and changes of binding by proteins that topologically constrain the plasmid DNA.


Asunto(s)
ADN-Topoisomerasas de Tipo II/metabolismo , ADN Bacteriano/genética , Escherichia coli/genética , Plásmidos , Fagos T/genética , Aminocumarinas , Cumarinas/farmacología , ADN Bacteriano/metabolismo , Escherichia coli/enzimología , Mutación , Ácido Oxolínico/farmacología , Regiones Promotoras Genéticas , Inhibidores de Topoisomerasa II
18.
J Mol Biol ; 201(1): 229-33, 1988 May 05.
Artículo en Inglés | MEDLINE | ID: mdl-2843645

RESUMEN

Oxolinic acid forms complexes with gyrase and DNA in such a way that subsequent denaturation of gyrase reveals DNA cleavage. Cleavage sites were mapped in a 10,000 base-pair region of the Escherichia coli chromosome containing the dnaA, dnaN, recF, and gyrB genes. Twenty-four cleavage sites were identified. The sites were cleaved at different frequencies, with the most frequent cleavage occurring within gyrB. Not all sites were equally sensitive to oxolinic acid concentration, some sites exhibited an altered cleavage frequency when the gyrB225 delta topA mutant strain DM800 was compared with wild-type cells, and coumermycin selectively changed the cleavage frequency at a few sites in the mutant strain DM800. These perturbations appear to alter the frequency of cleavage at a site but not the location of the site. The availability of many sites of differing strengths may be an important factor in the ability of gyrase to fine-tune the level of supercoiling or provide local swivels in bacterial DNA.


Asunto(s)
Cromosomas Bacterianos/metabolismo , ADN-Topoisomerasas de Tipo II/metabolismo , Ácido Oxolínico/farmacología , Aminocumarinas , Antibacterianos/farmacología , Mapeo Cromosómico , Cumarinas/farmacología , ADN Bacteriano/efectos de los fármacos , Escherichia coli/efectos de los fármacos , Escherichia coli/genética , Inhibidores de Topoisomerasa II
19.
J Mol Biol ; 181(1): 63-74, 1985 Jan 05.
Artículo en Inglés | MEDLINE | ID: mdl-2984430

RESUMEN

pBR322 DNA, linearized by lysis of an oxolinic acid-treated culture of Escherichia coli strain DK6recA- (pBR322) with sodium dodecyl sulfate, was purified, treated with DNA polymerase in the presence of the four deoxynucleoside triphosphates, and ligated to DNA linkers containing the XhoI recognition sequence. Most of the drug-resistant colonies resulting from transformation of E. coli with this material bore plasmids that appeared by restriction enzyme analysis to differ from pBR322 only by the introduction of an XhoI site. The XhoI sites in plasmids from 93 transformants were distributed unevenly around the pBR322 map. Maxam-Gilbert DNA sequence analysis of 36 of these plasmids, labeled at the 5' termini of the XhoI sites, revealed that 29 of them contained, in addition to the XhoI linker, a duplication of four base-pairs of the pBR322 sequence surrounding the linker. Therefore, oxolinic acid-induced linearization must have resulted in 5'-terminal extensions of four bases, the configuration known to result from oxolinic acid-induced DNA cleavage by DNA gyrase in vitro. The sequence data thus allowed the determination of the precise point at which linearization occurred, apparently by the abortion of a gyrase-DNA covalent intermediate that existed in vivo. When the 19 different sites of the 29 plasmids were compared, the following set of rules could be derived: (formula; see text) where N is any nucleotide, R is a purine, and Y is a pyrimidine. Cleavage occurred at the line between the eighth and ninth positions from the left. The parenthetical G and T were preferred secondarily to T and G, respectively, whereas T and G in the 13th position from the left were equally preferred. Several of these rules are similar to those proposed previously based on several in vitro gyrase cleavage sites. Some of our rules show dyad symmetry around the axis midway between the cleavage points in the two strands, while others are distinctly asymmetric.


Asunto(s)
ADN-Topoisomerasas de Tipo II/metabolismo , Escherichia coli/enzimología , Ácido Oxolínico/farmacología , Plásmidos/efectos de los fármacos , Secuencia de Bases , Sitios de Unión , Mapeo Cromosómico , ADN Bacteriano/metabolismo , ADN Circular/metabolismo , Escherichia coli/efectos de los fármacos
20.
J Mol Biol ; 258(4): 627-37, 1996 May 17.
Artículo en Inglés | MEDLINE | ID: mdl-8636997

RESUMEN

DNA gyrase, the bacterial enzyme that supercoils DNA, is trapped on chromosomal DNA by the 4-quinolone compounds, as drug-gyrase complexes that contain DNA breaks. Examination of chromosomal DNA extracted from Escherichia coli indicated that bacteriostatic concentrations of oxolinic acid trap gyrase and block DNA synthesis without releasing broken DNA from gyrase-DNA complexes. Release, detected as free rotation of DNA in the presence of an intercalating dye, occurred only at high, bactericidal oxolinic acid concentrations. Release of DNA breaks and cell death were both blocked by chloramphenicol, an inhibitor of protein synthesis, suggesting that synthesis of additional protein activity is required to free the DNA ends. Ciprofloxacin, a more potent quinolone, released DNA breaks and killed cells even in the presence of chloramphenicol. It is proposed that this second, chloramphenicol-insensitive mode for release of DNA breaks and cell killing arises from dissociation of gyrase subunits. Ciprofloxacin also killed a gyrase (gyrA) mutant resistant to the prototype of quinolone, nalidixic acid, and created complexes on DNA detected by DNA fragmentation. This lethal effect of ciprofloxacin was eliminated by additional mutations mapping in parC, one of the two genes encoding topoisomerase IV. Thus, the fluoroquinolone compounds have two intracellular targets. In the absence of the gyrA mutation, the parC (CipR) allele did not by itself confer resistance to ciprofloxacin, indicating that gyrase is the major quinolone target in E. coli. These findings provide a molecular explanation for quinolone action in bacteria and a new way to study topoisomerase IV-chromosome interactions.


Asunto(s)
Antiinfecciosos/farmacología , ADN-Topoisomerasas de Tipo II/efectos de los fármacos , ADN Bacteriano/efectos de los fármacos , Quinolonas/farmacología , Ciprofloxacina/farmacología , Girasa de ADN , Topoisomerasa de ADN IV , ADN Superhelicoidal/efectos de los fármacos , Escherichia coli/efectos de los fármacos , Modelos Biológicos , Mutación , Ácido Oxolínico/farmacología
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