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1.
Rev Argent Microbiol ; 56(2): 115-124, 2024.
Artículo en Español | MEDLINE | ID: mdl-38155042

RESUMEN

Waterborne diseases can have different origins, micro-organisms such as bacteria and parasites being the most important ones. In this study, two recreational aquatic environments were studied in the province of Salta, Argentina. Water samples collected from three different locations, two from a creek and one from the outlet of a thermal complex, were monitored at four time points. Physicochemical and microbiological characterization of each point was conducted, as well as a search for parasites and amebae. Parasites were identified through optical microscopy observations and free-living amebae (FLA) were isolated by spiking in Petri dishes followed by subsequent molecular identification. Water samples from the outlet of the thermal complex showed different physicochemical characteristics from those of the creek. Bacterial indicators of contamination were detected at all points; however, the creek water had a significantly higher concentration of Pseudomonas sp. Sporadically, creek samples exhibited Ascaris spp. eggs, Giardia sp. cysts, and ancylostomid eggs. The presence of FLA was observed in all samples, 15 of which were isolated and identified as Acanthamoeba sp., mostly belonging to the T4 genotype. Parasite surveillance in recreational aquatic environments is an important complement to traditional microbial indicators for assessing water quality. The identified parasites represent a potential health risk for people using these environments.


Asunto(s)
Recreación , Argentina , Animales , Humanos , Microbiología del Agua , Agua Dulce/parasitología , Agua Dulce/microbiología , Parásitos/aislamiento & purificación , Parásitos/clasificación
2.
Nature ; 546(7657): 285-288, 2017 06 08.
Artículo en Inglés | MEDLINE | ID: mdl-28562593

RESUMEN

Two distinct forms of natural selection promote adaptive biological diversity. Divergent selection occurs when different environments favour different phenotypes, leading to increased differences between populations. Negative frequency-dependent selection occurs when rare variants within a population are favoured over common ones, increasing diversity within populations. These two diversifying forces promote genetic variation at different spatial scales, and may act in opposition, but their relative effects remain unclear because they are rarely measured concurrently. Here we show that negative frequency-dependent selection within populations can favor rare immigrants over locally adapted residents. We reciprocally transplanted lake and stream ecotypes of threespine stickleback into lake and stream habitats, while manipulating the relative abundance of residents versus immigrants. We found negative frequency-dependence: survival was highest for the locally rare ecotype, rather than natives. Also, individuals with locally rare major histocompatibility complex (MHC) class IIb genotypes were infected by fewer parasites. This negative frequency-dependent selection will tend to favour rare immigrants over common residents, amplifying the effect of migration and undermining the efficacy of divergent natural selection to drive population differences. The only signal of divergent selection was a tendency for foreign fish to have higher parasite loads than residents, after controlling for MHC genotype rarity. Frequency-dependent ecological interactions have long been thought to promote speciation. Our results suggest a more nuanced view in which negative frequency dependence alters the fate of migrants to promote or constrain evolutionary divergence between populations.


Asunto(s)
Evolución Biológica , Ecosistema , Ecotipo , Selección Genética , Smegmamorpha/genética , Smegmamorpha/fisiología , Aclimatación/genética , Migración Animal , Animales , Tamaño Corporal , Femenino , Especiación Genética , Variación Genética , Genotipo , Lagos , Complejo Mayor de Histocompatibilidad/genética , Masculino , Parásitos/aislamiento & purificación , Densidad de Población , Ríos , Smegmamorpha/anatomía & histología , Smegmamorpha/parasitología , Tasa de Supervivencia
3.
Proc Natl Acad Sci U S A ; 116(29): 14645-14650, 2019 07 16.
Artículo en Inglés | MEDLINE | ID: mdl-31262813

RESUMEN

Novel parasites can have wide-ranging impacts, not only on host populations, but also on the resident parasite community. Historically, impacts of novel parasites have been assessed by examining pairwise interactions between parasite species. However, parasite communities are complex networks of interacting species. Here we used multivariate taxonomic and trait-based approaches to determine how parasite community composition changed when African buffalo (Syncerus caffer) acquired an emerging disease, bovine tuberculosis (BTB). Both taxonomic and functional parasite richness increased significantly in animals that acquired BTB than in those that did not. Thus, the presence of BTB seems to catalyze extraordinary shifts in community composition. There were no differences in overall parasite taxonomic composition between infected and uninfected individuals, however. The trait-based analysis revealed an increase in direct-transmitted, quickly replicating parasites following BTB infection. This study demonstrates that trait-based approaches provide insight into parasite community dynamics in the context of emerging infections.


Asunto(s)
Búfalos/parasitología , Enfermedades Transmisibles Emergentes/veterinaria , Interacciones Huésped-Parásitos/genética , Parásitos/genética , Tuberculosis Bovina/inmunología , Animales , Búfalos/inmunología , Búfalos/microbiología , Bovinos , Enfermedades Transmisibles Emergentes/inmunología , Enfermedades Transmisibles Emergentes/microbiología , Femenino , Interacciones Huésped-Parásitos/inmunología , Estudios Longitudinales , Mycobacterium bovis/inmunología , Parásitos/inmunología , Parásitos/aislamiento & purificación , Sudáfrica , Tuberculosis Bovina/microbiología
4.
Parasitol Res ; 121(9): 2601-2613, 2022 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-35788769

RESUMEN

The aim of this study was to identify the aggregation sites and transmission characteristics of Gasterophilus pecorum, the dominant pathogen of endangered equines in desert steppe. Therefore, we tested with a four-arm olfactometer the olfactory response of the G. pecorum adults to the odors that have a great impact on their life cycle, and also investigated the occurrence sites of the adults in the area where the Przewalski's horse (Equus przewalskii) roam frequently during the peak period of G. pecorum infection. The results of four-directional olfactory test showed that the fresh horse feces had a stronger attraction rate on both male (50.4%) and female flies (38.2%). Stipa caucasica, the only oviposition plant where G. pecorum lay eggs, had a better attraction effect on females than that on males. And the attraction rates of S. caucasica to G. pecorum females in the early growth stage (Stipa I) and mid-growth stage (Stipa II) were 32.8% and 36.8%, respectively. In addition, the two-directional olfactory test showed that the attraction rate of males to fresh horse feces (68.90%) was higher than that to Stipa II (31.10%), and females also showed similar olfactory responses. Moreover, in our field investigation, 68.29% of G. pecorum adults were collected from around the horse feces. The results of laboratory test and field investigation implied that the location mechanism of G. pecorum aggregation for mating is related to the orientation of horse feces. The horse feces and the vicinity are the key contamination areas of G. pecorum, and it is also the areas where horses are seriously infected with G. pecorum. Those fresh feces, which gather abundant information about the host, naturally had the greatest chance of contacting with the host; G. pecorum adults create the opportunity to enter directly into the host's mouth and infect the host by laying eggs on S. caucasica, which is the most favorite plant of the host in this area. These characteristics are one of the main reasons why G. pecorum has become the dominant species under the condition of sparse vegetation in desert steppe.


Asunto(s)
Dípteros/fisiología , Heces/química , Enfermedades de los Caballos/parasitología , Enfermedades de los Caballos/transmisión , Parasitosis Intestinales/transmisión , Animales , Clima Desértico , Especies en Peligro de Extinción , Heces/parasitología , Femenino , Caballos , Parasitosis Intestinales/parasitología , Masculino , Parásitos/crecimiento & desarrollo , Parásitos/aislamiento & purificación , Desarrollo de la Planta , Plantas
5.
Korean J Parasitol ; 60(3): 207-211, 2022 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-35772740

RESUMEN

This study aimed to examine the distribution of gastrointestinal parasitic infections in domestic pigs in the Republic of Korea. From May 2020 to October 2021, 364 pig fecal samples were collected from 75 farms in 7 Provinces and microscopically examined. A total of 170 (46.7%) pigs were infected with at least one of the following parasites: Balantioides coli, strongyles, Ascaris suum, Trichuris suis, and coccidia. By parasite species, B. coli, strongyles, A. suum, T. suis, and coccidia oocysts or eggs were detected in 144 (39.6%), 24 (6.6%), 14 (3.8%), 4 (1.1%), and 1 (0.3%) samples, respectively. One hundred fifty-four, 15, and 1 cases showed single, double, and triple infections, respectively. Of the swine fecal samples from 75 farms, 69 specimens (92.0%) were infected with 1 or more parasites. All surveyed farms across the country exhibited a positive rate of over 30%, among which the highest positive rate was 65.0% in Chungcheongnam-do, and Jeollabuk-do was followed by 61.9%. Winter showed a statistically lower prevalence than other seasons. This study showed that gastrointestinal parasites are prevalent in pigs in Korea, although the diversity of parasites is low.


Asunto(s)
Parasitosis Intestinales/veterinaria , Parásitos/clasificación , Enfermedades de los Porcinos/epidemiología , Enfermedades de los Porcinos/parasitología , Animales , Heces/parasitología , Parasitosis Intestinales/epidemiología , Parasitosis Intestinales/parasitología , Parásitos/aislamiento & purificación , Prevalencia , República de Corea/epidemiología , Estaciones del Año , Sus scrofa , Porcinos
6.
Environ Microbiol ; 23(1): 478-483, 2021 01.
Artículo en Inglés | MEDLINE | ID: mdl-33225560

RESUMEN

Assessing the extent of parasite diversity requires the application of appropriate molecular tools, especially given the growing evidence of multiple parasite co-occurrence. Here, we compared the performance of a next-generation sequencing technology (Ion PGM ™ System) in 12 Bombus terrestris specimens that were PCR-identified as positive for trypanosomatids (Leishmaniinae) in a previous study. These bumblebees were also screened for the occurrence of Nosematidae and Neogregarinorida parasites using both classical protocols (either specific PCR amplification or amplification with broad-range primers plus Sanger sequencing) and Ion PGM sequencing. The latter revealed higher parasite diversity within individuals, especially among Leishmaniinae (which were present as a combination of Lotmaria passim, Crithidia mellificae and Crithidia bombi), and the occurrence of taxa never reported in these hosts: Crithidia acanthocephali and a novel neogregarinorida species. Furthermore, the complementary results produced by the different sets of primers highlighted the convenience of using multiple markers to minimize the chance of some target organisms going unnoticed. Altogether, the deep sequencing methodology offered a more comprehensive way to investigate parasite diversity than the usual identification methods and provided new insights whose importance for bumblebee health should be further analysed.


Asunto(s)
Abejas/parasitología , Biodiversidad , Parásitos/aislamiento & purificación , Animales , Apicomplexa/clasificación , Apicomplexa/genética , Apicomplexa/aislamiento & purificación , Crithidia/genética , Crithidia/aislamiento & purificación , Cartilla de ADN/genética , Secuenciación de Nucleótidos de Alto Rendimiento , Parásitos/clasificación , Parásitos/genética , Reacción en Cadena de la Polimerasa , Trypanosomatina/clasificación , Trypanosomatina/genética , Trypanosomatina/aislamiento & purificación
7.
Ophthalmology ; 128(5): 729-739, 2021 05.
Artículo en Inglés | MEDLINE | ID: mdl-32987046

RESUMEN

PURPOSE: Current polymerase chain reaction (PCR) methods for the diagnosis of infections are time consuming and require large sample volume and skilled technicians. We developed a novel, easy-to-use, and rapid (processing time, 1 minute; total time, 33 minutes) multiplex real-time PCR test (Direct Strip PCR) that did not require DNA extraction to detect 9 pathogens that could cause uveitis in 20-µl samples. DESIGN: Multicenter prospective evaluation of a diagnostic PCR test. PARTICIPANTS: A total of 511 participants (patients with infectious uveitis and controls) were examined at 18 institutes worldwide. METHODS: After validation, intraocular fluid samples were subjected to etiologic or exclusive diagnosis, including intraoperative rapid diagnosis. MAIN OUTCOME MEASURES: The concordance and correlations between Direct Strip PCR and quantitative PCR (qPCR) results. RESULTS: Direct Strip PCR exhibited rapid detection, good repeatability and specificity, long storage stability, and detection ability equal to that of qPCR. It also showed low interinstitutional variability compared with qPCR, even when PCR beginners used various real-time PCR machines. The Direct Strip PCR for 9 pathogens exhibited high concordance against the qPCR (positive concordance rate, 98.8%-100%; negative concordance rate, 99.8%-100%; κ coefficient, 0.969-1.000; P < 0.001-0.031). Additionally, results obtained using Direct Strip PCR and qPCR were highly correlated (ρ = 0.748; P < 0.001). This assay was used for rapid intraoperative diagnosis. CONCLUSIONS: The Direct Strip PCR test may improve the prognosis of various infectious diseases because it facilitates rapid etiologic evaluation at the first hospital visit and can be used for intraoperative diagnosis.


Asunto(s)
Infecciones Parasitarias del Ojo/diagnóstico , Infecciones Virales del Ojo/diagnóstico , Reacción en Cadena de la Polimerasa Multiplex/métodos , Enfermedades Parasitarias/diagnóstico , Uveítis/parasitología , Uveítis/virología , Virosis/diagnóstico , Anciano , Anciano de 80 o más Años , Animales , Humor Acuoso/parasitología , Humor Acuoso/virología , Cartilla de ADN/química , ADN Protozoario/aislamiento & purificación , ADN Viral/aislamiento & purificación , Técnicas de Diagnóstico Oftalmológico , Infecciones Parasitarias del Ojo/parasitología , Infecciones Virales del Ojo/virología , Femenino , Humanos , Periodo Intraoperatorio , Masculino , Persona de Mediana Edad , Parásitos/genética , Parásitos/aislamiento & purificación , Enfermedades Parasitarias/parasitología , Estudios Prospectivos , Reproducibilidad de los Resultados , Sensibilidad y Especificidad , Virosis/virología , Virus/genética , Virus/aislamiento & purificación , Cuerpo Vítreo/parasitología , Cuerpo Vítreo/virología
8.
Electrophoresis ; 42(5): 588-604, 2021 03.
Artículo en Inglés | MEDLINE | ID: mdl-33151541

RESUMEN

Nonlinear electrokinetics (EK), specifically electrophoresis of the second kind, dielectrophoresis (DEP) and electrorotation (EROT), have gained significant interest recently for their flexibility and labeless discriminant manner of operation. The current applications of these technologies are a clear advancement from what they were when first discovered, but also still show strong signs of future growth. The present review article presents a discussion of the current uses of microscale nonlinear EK technologies as analytical, sensing, and purification tools for microorganisms. The discussion is focused on some of the latest discoveries with various nonlinear EK microfluidic techniques, such as DEP particle trapping and EROT for particle assessments, for the analysis of microorganisms ranging from viruses to parasites. Along the way, special focus was given to key research articles from within the past two years to provide the most up-to-date knowledge on the current state-of-the-art within the field of microscale EK, and from there, an outlook on where the future of the field is headed is also included.


Asunto(s)
Electroforesis , Microbiología , Técnicas Analíticas Microfluídicas , Animales , Bacterias/química , Bacterias/aislamiento & purificación , Parásitos/química , Parásitos/aislamiento & purificación , Virus/química , Virus/aislamiento & purificación
9.
Int Arch Allergy Immunol ; 182(11): 1036-1045, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33951631

RESUMEN

BACKGROUND: There is not much known about venom allergy in tropical regions. Here, we studied the prevalence of specific IgE (sIgE) and skin prick test (SPT) reactivity and reported sting-related symptoms, in high- and low-socioeconomic status (SES) schoolchildren living in urban city of Makassar in Indonesia. METHODS: Children from high- (n = 160) and low- (n = 165) SES schools were recruited. Standardized questionnaires were used to record information on allergic disorders as well as sting-related symptoms. Parasitic infection, SPT reactivity, and sIgE to Apis mellifera (bee-venom) as well as Vespula spp. (wasp-venom) were assessed. RESULTS: SPT reactivity to bee- and wasp-venom was 14.3 and 12.7%, while the prevalence of sIgE was 26.5 and 28.5%, respectively. When SES was considered, prevalence of SPT to bee- and wasp-venom was higher in high-SES than in low-SES schoolchildren (bee: 22.8 vs. 5.7%, p < 0.001; and wasp: 19.6 vs. 5.7%, p < 0.001). Conversely, sIgE to both venoms was lower in high-SES than in low-SES (bee: 19 vs. 34%, p = 0.016; and wasp: 19 vs. 38%, p = 0.003). Furthermore, among SPT positive subjects, considerable proportion had no detectable sIgE to bee- (65.85%) or wasp-venom (66.67%). Altogether the sensitizations were rarely translated into clinical reaction, as only 1 child reported significant local reaction after being stung. No association with parasitic infections was found. CONCLUSIONS AND CLINICAL RELEVANCE: Sensitization against bee- or wasp-venom is quite prevalent among schoolchildren in Indonesia. The discordance between SPT and sIgE might suggest the direct (non-IgE) effect of venoms in skin reactivity. Recorded sensitizations had poor clinical relevance as they rarely translated into clinical symptoms.


Asunto(s)
Alérgenos/inmunología , Venenos de Abeja/inmunología , Hipersensibilidad/epidemiología , Venenos de Avispas/inmunología , Animales , Niño , Ciudades/epidemiología , ADN de Helmintos/análisis , Heces/parasitología , Femenino , Humanos , Hipersensibilidad/sangre , Hipersensibilidad/diagnóstico , Hipersensibilidad/inmunología , Inmunoglobulina E/sangre , Indonesia/epidemiología , Masculino , Parásitos/genética , Parásitos/aislamiento & purificación , Prevalencia , Pruebas Cutáneas , Clase Social
10.
Food Microbiol ; 95: 103703, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-33397621

RESUMEN

Regarding preparing and serving foods, food handlers have an influential role in the spreading of foodborne infections. Due to the great potential to cause foodborne infections, intestinal parasites (IPs) are considered a significant public health problem in today's societies. In Iran, despite several regional reports, national data on IPs prevalence in food handlers are lacking. The aim of the present study, therefore, is to estimate the pooled prevalence of IPs infections and associated pooled odds ratio of educational level among food handlers in Iran. PubMed, Web of Science, Scopus, Embase, and Google Scholar databases (international) and SID and Magiran databases (national) were systematically searched for studies that reporting the prevalence of IPs in food handlers in Iran, published between 2000 and 2020. Pooled prevalence was estimated using a random-effects model with a 95% confidence interval (CI) and depicted as a forest plot, while heterogeneity was evaluated using Cochran's Q-test. The overall pooled prevalence estimate for IPs was 19.3% (95% CI = 14.9-23.7%). Prevalence of the protozoan parasites (20%, 95% CI = 13.7-26.3%) was significantly higher than that of the helminthic parasites (1.6%, 95% CI = 1.1-2.0%). Giardia lamblia (5.2%), Entamoeba coli (5.0%), and Blastocystis spp. (4.4%), as protozoan parasites, and Ascaris lumbricoides (1.4%), Enterobius vermicularis (0.9%), and Hymenolepis nana (0.5%), as helminthic parasites, were the most commonly reported species. Food handlers with low educational levels were 20% more exposed to IPs infection, compared to those with high educational levels (OR = 1.21, 95% CI = 0.88 to 1.65). The prevalence of IPs infections among food handlers in Iran is significant. Besides taking into account this epidemiologic information, a holistic approach, including periodic stool screening, health education, and treatment of infected food handlers, will help in the control of these infections in Iran.


Asunto(s)
Parasitosis Intestinales/parasitología , Parásitos/aislamiento & purificación , Animales , Heces/parasitología , Manipulación de Alimentos , Inocuidad de los Alimentos , Servicios de Alimentación , Humanos , Parasitosis Intestinales/epidemiología , Irán/epidemiología , Parásitos/clasificación , Parásitos/genética , Prevalencia
11.
Food Microbiol ; 95: 103704, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-33397622

RESUMEN

Fresh vegetables are essential components of a healthy and nutritious diet, but if consumed raw without proper washing and/or disinfection, can be important agents of transmission of enteric pathogens. This study aimed to determine the prevalence of zoonotic parasites on vegetables freshly harvested and "ready to eat" vegetables from greengrocers and markets in northwestern Iran. In addition, the effect of cropping system and season on contamination levels were assessed as well as the efficacy of washing procedures to remove parasites from the vegetables. A total of 2757 samples composed of field (n = 1, 600) and "ready to eat" (n = 1157) vegetables were analyzed. Vegetables included leek, parsley, basil, coriander, savory, mint, lettuce, cabbage, radish, dill, spinach, mushroom, carrot, tomato, cucumber and pumpkin. Normal physiological saline washings from 200 g samples were processed using standard parasitological techniques and examined microscopically. A total of 53.14% of vegetable samples obtained from different fields and 18.23% of "ready to eat" vegetables purchased from greengrocers and markets were contaminated with different parasitic organisms including; Entamoeba coli cysts, Giardia intestinalis cysts, Cryptosporidium parvum oocysts, Fasciola hepatica eggs, Dicrocoelium dendriticum eggs, Taenia spp. eggs, Hymenolepis nana eggs, Ancylostoma spp. eggs, Toxocara cati eggs, Toxocara canis eggs, Strongyloides stercoralis larvae, and Ascaris lumbricoides eggs. In both field and "ready to eat" vegetables, the highest parasitic contamination was observed in lettuce with a rate of 91.1% and 55.44%, respectively. The most common parasitic organism was Fasciola hepatica. A seasonal difference in contamination with parasitic organisms was found for field and "ready to eat" vegetables (P < 0.05). There was a significant difference in the recovery of parasitic organisms depending on the washing method with water and dishwashing liquid being the least effective. Proper washing of vegetables is imperative for a healthy diet as the results of this study showed the presence of zoonotic parasites from field and ready to eat vegetables in Iran.


Asunto(s)
Zoonosis Bacterianas/parasitología , Contaminación de Alimentos/análisis , Parásitos/aislamiento & purificación , Verduras/parasitología , Animales , Cucumis sativus/parasitología , Manipulación de Alimentos , Humanos , Irán , Lactuca/parasitología , Solanum lycopersicum/parasitología , Parásitos/clasificación , Parásitos/genética , Parásitos/crecimiento & desarrollo , Petroselinum/parasitología
12.
Parasitol Res ; 120(1): 117-132, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33159458

RESUMEN

The northern fur seal (NFS), Callorhinus ursinus (Mammalia: Otariidae), is a marine mammal species included into the IUCN Red List as the vulnerable species which population is dramatically declining. A significant amount of parasitological data collected previously and our recent data allowed us to clarify the list of NFS metazoan parasites and to perform a comprehensive analysis of the gastrointestinal helminth community. Gastrointestinal tracts from 756 NFSs (3- to 4-year-old males) were collected during the annual Aleut subsistence harvests in July-August of 2011-2014 from five separate rookeries on St. Paul Island, Alaska. Totally, 27,625 specimens of helminths and approximately 1000 nasal mites were collected and identified. Detailed analysis of the previously published and newly obtained data revealed 32 species of metazoan parasites, including trematodes (6 species), cestodes (4), nematodes (9), acanthocephalans (9) and arthropods (4). The gastrointestinal helminth community of newly studied NFSs comprised 19 species including trematodes (4), cestodes (3), nematodes (5) and acanthocephalans (7). Temporal changes in the helminth community structure were small but statistically significant. Gastrointestinal helminth infracommunities comprised from 1 to 10 species (average of 4). Small but significant correlation was found between the abundances of acanthocephalans (Corynosoma similis and C. strumosum), nematodes (Contracaecum osculatum, Pseudoterranova spp.) and cestode Diphyllobothrium tetrapterum.


Asunto(s)
Lobos Marinos/parasitología , Tracto Gastrointestinal/parasitología , Helmintiasis Animal/parasitología , Helmintos/aislamiento & purificación , Alaska/epidemiología , Animales , Helmintiasis Animal/epidemiología , Helmintos/clasificación , Helmintos/citología , Islas/epidemiología , Masculino , Parásitos/clasificación , Parásitos/aislamiento & purificación , Prevalencia
13.
Environ Microbiol ; 22(4): 1280-1293, 2020 04.
Artículo en Inglés | MEDLINE | ID: mdl-31997567

RESUMEN

Streets are constantly crossed by billions of vehicles and pedestrians. Their gutters, which convey stormwater and contribute to waste management, and are important for human health and well-being, probably play a number of ecological roles. Street surfaces may also represent an important part of city surface areas. To better characterize the ecology of this yet poorly explored compartment, we used filtration and DNA metabarcoding to address microbial community composition and assembly across the city of Paris, France. Diverse bacterial and eukaryotic taxonomic groups were identified, including members involved in key biogeochemical processes, along with a number of parasites and putative pathogens of human, animals and plants. We showed that the beta diversity patterns between bacterial and eukaryotic communities were correlated, suggesting interdomain associations. Beta diversity analyses revealed the significance of biotic factors (cohesion metrics) in shaping gutter microbial community assembly and, to a lesser extent, the contribution of abiotic factors (pH and conductivity). Co-occurrences analysis confirmed contrasting non-random patterns both within and between domains of life, specifically when comparing diatoms and fungi. Our results highlight microbial coexistence patterns in streets and reinforce the need to further explore biodiversity in urban ground transportation infrastructures.


Asunto(s)
Biodiversidad , Microbiología Ambiental , Animales , Bacterias/clasificación , Bacterias/aislamiento & purificación , Ciudades , Monitoreo del Ambiente , Francia , Hongos/clasificación , Hongos/aislamiento & purificación , Humanos , Microbiota , Parásitos/clasificación , Parásitos/aislamiento & purificación , Transportes
14.
Epidemiol Infect ; 148: e39, 2020 02 27.
Artículo en Inglés | MEDLINE | ID: mdl-32102708

RESUMEN

Nutritional factors and infectious agents may contribute to paediatric growth deficits in low- and middle-income countries; however, the contribution of enteric pathogens is only beginning to be understood. We analysed the stool from children <5 years old from an open cohort, cluster-randomised controlled trial of a point-of-collection water chlorinator in urban Bangladesh. We compared the presence/absence of 15 enteric pathogens detected via multiplex, molecular methods in the stool with concurrent Z-scores/Z-score cut-offs (-2 standard deviations (s.d.)) for height-for-age (HAZ/stunting), weight-for-age (WAZ/underweight) and weight-for-height (WHZ/wasting), adjusted for sociodemographic and trial-related factors, and measured caregiver-reported diarrhoea. Enteric pathogen prevalence in the stool was high (88% had ≥1 enteric pathogen, most commonly Giardia spp. (40%), Salmonella enterica (33%), enterotoxigenic E. coli (28%) and Shigella spp. (27%)) while reported 7-day diarrhoea prevalence was 6%, suggesting high subclinical infection rates. Many children were stunted (26%) or underweight (24%). Adjusted models suggested Giardia spp. detection was associated with lower HAZ (-0.22 s.d., 95% CI -0.44 to 0.00; prevalence ratio for stunting: 1.39, 95% CI 0.94-2.06) and potentially lower WAZ. No pathogens were associated with reported diarrhoea in adjusted models. Giardia spp. carriage may be associated with growth faltering, but not diarrhoea, in this and similar low-income settings. Stool-based enteric pathogen detection provides a direct indication of previous exposure that may be useful as a broader endpoint of trials of environmental interventions.


Asunto(s)
Portador Sano/epidemiología , Enfermedades Transmisibles/complicaciones , Enfermedades Transmisibles/epidemiología , Discapacidades del Desarrollo/epidemiología , Enfermedades Gastrointestinales/complicaciones , Enfermedades Gastrointestinales/epidemiología , Animales , Antropometría , Bacterias/clasificación , Bacterias/aislamiento & purificación , Bangladesh/epidemiología , Estatura , Peso Corporal , Preescolar , Estudios Transversales , Heces/microbiología , Heces/parasitología , Femenino , Humanos , Lactante , Recién Nacido , Masculino , Parásitos/clasificación , Parásitos/aislamiento & purificación , Prevalencia , Población Urbana
15.
Parasitology ; 147(5): 516-532, 2020 04.
Artículo en Inglés | MEDLINE | ID: mdl-31965956

RESUMEN

One of the ways of human parasitic infection is the accidental ingestion of vegetables contaminated with parasites, which represents a major human health hazard. This non-exhaustive review aims to evaluate studies carried out on five types of vegetables (lettuce, parsley, coriander, carrot and radish) since 2000, particularly the methods used for recovery, concentration, detection and identification of protozoan parasites such as Toxoplasma gondii, Giardia duodenalis and Cryptosporidium spp., and the results of each work. Various studies have determined the presence of pathogenic parasites in fresh vegetables with different rates; this variation in rate depends particularly on the detection method used which is related to each parasite and each vegetable type. The variation in parasitic prevalence in food could be due to different factors such as the geographical location, the size of analysed samples and the methods used for parasite detection.


Asunto(s)
Contaminación de Alimentos , Enfermedades Parasitarias/transmisión , Verduras/parasitología , Animales , Criptosporidiosis/transmisión , Cryptosporidium/aislamiento & purificación , Giardia/aislamiento & purificación , Giardiasis/transmisión , Parásitos/aislamiento & purificación , Prevalencia , Toxoplasma/aislamiento & purificación , Toxoplasmosis/transmisión
16.
Nature ; 506(7488): 364-6, 2014 Feb 20.
Artículo en Inglés | MEDLINE | ID: mdl-24553241

RESUMEN

Emerging infectious diseases (EIDs) pose a risk to human welfare, both directly and indirectly, by affecting managed livestock and wildlife that provide valuable resources and ecosystem services, such as the pollination of crops. Honeybees (Apis mellifera), the prevailing managed insect crop pollinator, suffer from a range of emerging and exotic high-impact pathogens, and population maintenance requires active management by beekeepers to control them. Wild pollinators such as bumblebees (Bombus spp.) are in global decline, one cause of which may be pathogen spillover from managed pollinators like honeybees or commercial colonies of bumblebees. Here we use a combination of infection experiments and landscape-scale field data to show that honeybee EIDs are indeed widespread infectious agents within the pollinator assemblage. The prevalence of deformed wing virus (DWV) and the exotic parasite Nosema ceranae in honeybees and bumblebees is linked; as honeybees have higher DWV prevalence, and sympatric bumblebees and honeybees are infected by the same DWV strains, Apis is the likely source of at least one major EID in wild pollinators. Lessons learned from vertebrates highlight the need for increased pathogen control in managed bee species to maintain wild pollinators, as declines in native pollinators may be caused by interspecies pathogen transmission originating from managed pollinators.


Asunto(s)
Abejas/parasitología , Abejas/virología , Parásitos/patogenicidad , Polinización , Virus ARN/patogenicidad , Animales , Apicultura/métodos , Abejas/clasificación , Abejas/fisiología , Datos de Secuencia Molecular , Parásitos/genética , Parásitos/aislamiento & purificación , Polinización/fisiología , Virus ARN/genética , Virus ARN/aislamiento & purificación , Riesgo , Reino Unido
17.
Parasitol Res ; 119(6): 1891-1901, 2020 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-32382990

RESUMEN

Amphibian populations are declining around the world, and the main reasons are the environmental changes and pathogens. However, there are few studies addressing the interaction and impact of the different pathogens that affect amphibians, such as hemoparasites. These parasites had been described as common in some amphibian species, but unfortunately, their description and characterization are unclear and scarcely spread. The objective of the present study was to evaluate the morphological and molecular characterization of hemoparasites present in vaillant's frogs. Seven frogs of Lithobates vaillanti were captured at the biological station La Florida in Tabasco, Mexico. Blood smears were performed, and results show that 100% of the animals have hemoparasites. Three types of hemoparasites were found. Eighty-five percent of the frogs were positive to Hepatozoon sp., 57% to Lankesterella sp., and 28% to Trypanosoma sp. According to the molecular analysis of the obtained sequences of Trypanosoma sp. and Hepatozoon sp., both protozoans were positioned in between the clusters of parasites of different geographical regions. Nevertheless, no species names were assigned to any of these parasites because more sequences and analysis are needed.


Asunto(s)
Ranidae/parasitología , Animales , Eucoccidiida/clasificación , Eucoccidiida/aislamiento & purificación , Florida , México , Parásitos/clasificación , Parásitos/aislamiento & purificación , Trypanosoma/clasificación , Trypanosoma/aislamiento & purificación
18.
Parasitol Res ; 119(8): 2623-2629, 2020 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-32591865

RESUMEN

Shotgun metagenomics with high-throughput sequencing (HTS) techniques is increasingly used for pathogen identification and characterization. While many studies apply targeted amplicon sequencing, here we used untargeted metagenomics to simultaneously identify protists and helminths in pre-diagnosed faecal and tissue samples. The approach starts from RNA and operates without an amplification step, therefore allowing the detection of all eukaryotes, including pathogens, since it circumvents the bias typically observed in amplicon-based HTS approaches. The generated metagenomics datasets were analysed using the RIEMS tool for initial taxonomic read assignment. Mapping analyses against ribosomal reference sequences were subsequently applied to extract 18S rRNA sequences abundantly present in the sequence datasets. The original diagnosis, which was based on microscopy and/or PCR, could be confirmed in nearly all cases using ribosomal RNA metagenomics. In addition to the pre-diagnosed taxa, we detected other intestinal eukaryotic parasites of uncertain pathogenicity (of the genera Dientamoeba, Entamoeba, Endolimax, Hymenolepis) that are often excluded from routine diagnostic protocols. The study clearly demonstrates the applicability of untargeted RNA metagenomics for the parallel detection of parasites.


Asunto(s)
Parasitosis Intestinales/diagnóstico , Metagenómica , Técnicas de Diagnóstico Molecular/métodos , Parásitos/aislamiento & purificación , Animales , Heces/parasitología , Secuenciación de Nucleótidos de Alto Rendimiento , Humanos , Parásitos/clasificación , Parásitos/genética , ARN Ribosómico 18S/genética , Análisis de Secuencia de ADN
19.
Parasitol Res ; 119(5): 1597-1605, 2020 May.
Artículo en Inglés | MEDLINE | ID: mdl-32006226

RESUMEN

Major histocompatibility complex class II (MHC II) is an essential molecule triggering the adaptive immune response by the presentation of pathogens to helper T cells. The association between individual MHC II variants and various parasites has become a frequent finding in studies of vertebrate populations. However, although bird ectoparasites have a significant effect on their host's fitness, and the host's immune system can regulate ectoparasitic infections, no study has yet investigated the association between MHC II polymorphism and ectoparasite infection in the populations of free-living birds. Here, we test whether an association exists between the abundance of a chewing louse (Myrsidea nesomimi) and MHC II polymorphism of its hosts, the Galápagos mockingbirds (Mimus). We have found that the presence of two MHC II supertypes (functionally differentiated clusters) was significantly associated with louse abundance. This pattern supports the theory that a co-evolutionary interaction stands behind the maintenance of MHC polymorphism. Moreover, we have found a positive correlation between louse abundance and heterophil/lymphocyte ratio (an indicator of immunological stress) that serves as an additional piece of evidence that ectoparasite burden is affected by immunological state of Galápagos mockingbirds.


Asunto(s)
Antígenos de Histocompatibilidad Clase II/inmunología , Infestaciones por Piojos/inmunología , Passeriformes/inmunología , Passeriformes/parasitología , Phthiraptera/inmunología , Animales , Evolución Biológica , Antígenos de Histocompatibilidad Clase II/genética , Parásitos/clasificación , Parásitos/aislamiento & purificación , Phthiraptera/clasificación , Polimorfismo Genético/genética
20.
Parasitol Res ; 119(9): 3053-3059, 2020 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-32638102

RESUMEN

Intestinal parasitic infections (IPIs) can be a severe threat to immunocompromised patients. This is particularly true for those undergoing chemotherapy and hemodialysis. The present research is aimed at identifying intestinal parasites that might be present in immunocompromised patients. In this cross-sectional study 1040 stool samples were collected from March to September 2017. Six hundred and forty-one stool samples from immunocompromised patients (279 samples from hemodialysis patients and 362 samples from chemotherapy patients) and 399 samples from the control group were collected in Guilan province, Iran. The samples were tested by direct, formalin-ether methods for protozoa and ova of intestinal parasites and Ziehl-Neelsen staining methods for coccidian parasites such as Cryptosporidium species. The overall parasitic infection rate was highest (15%) in hemodialysis patients and 11.3% in chemotherapy patients, whereas the lowest rate was observed (7.3%) in the control group. The infectivity rates were statistically significant (P = 0.008) when compared with the control group. The parasites found were Blastocystis hominis (8.9% of the cases), Entamoeba coli (1.6%), Iodamoeba butschlii (0.8%), Endolimax nana (0.6%), Chilomastix mesnili (0.5%), Strongyloides stercoralis (0.5%), and Taenia species (0.15%), whereas Giardia lamblia was detected only in the control group. There was not a correlation between prevalence of parasites with age or education levels of the infected individuals. Results of the present study suggest that periodic stool examinations in special parasitological laboratories should be included as part of routine and general medical care.


Asunto(s)
Infección Hospitalaria/parasitología , Helmintiasis/parasitología , Helmintos/aislamiento & purificación , Intestinos/parasitología , Neoplasias/parasitología , Parásitos/aislamiento & purificación , Diálisis Renal/efectos adversos , Adulto , Anciano , Anciano de 80 o más Años , Animales , Estudios Transversales , Heces/parasitología , Femenino , Helmintiasis/inmunología , Helmintos/clasificación , Humanos , Huésped Inmunocomprometido , Parasitosis Intestinales/parasitología , Irán/epidemiología , Masculino , Persona de Mediana Edad , Neoplasias/inmunología , Parásitos/clasificación , Parásitos/genética , Prevalencia , Adulto Joven
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