Pesquisa | BVS Violência e Saúde

1.

IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata.

Camargo, Antonio Pedro; Call, Lee; Roux, Simon; Nayfach, Stephen; Huntemann, Marcel; Palaniappan, Krishnaveni; Ratner, Anna; Chu, Ken; Mukherjeep, Supratim; Reddy, T B K; Chen, I-Min A; Ivanova, Natalia N; Eloe-Fadrosh, Emiley A; Woyke, Tanja; Baltrus, David A; Castañeda-Barba, Salvador; de la Cruz, Fernando; Funnell, Barbara E; Hall, James P J; Mukhopadhyay, Aindrila; Rocha, Eduardo P C; Stalder, Thibault; Top, Eva; Kyrpides, Nikos C.

Nucleic Acids Res ; 52(D1): D164-D173, 2024 Jan 05.

Artigo em Inglês | MEDLINE | ID: mdl-37930866

2.

Coordinating plasmid partition with bacterial chromosome segregation.

Funnell, Barbara E.

Proc Natl Acad Sci U S A ; 121(21): e2407081121, 2024 May 21.

Artigo em Inglês | MEDLINE | ID: mdl-38722814

3.

How to build segregation complexes in bacteria: Use bridges.

Funnell, Barbara E.

Genes Dev ; 28(11): 1140-2, 2014 Jun 01.

Artigo em Inglês | MEDLINE | ID: mdl-24888585

4.

Nonspecific DNA binding by P1 ParA determines the distribution of plasmid partition and repressor activities.

Baxter, Jamie C; Waples, William G; Funnell, Barbara E.

J Biol Chem ; 295(50): 17298-17309, 2020 12 11.

Artigo em Inglês | MEDLINE | ID: mdl-33055234

5.

ParA-mediated plasmid partition driven by protein pattern self-organization.

Hwang, Ling Chin; Vecchiarelli, Anthony G; Han, Yong-Woon; Mizuuchi, Michiyo; Harada, Yoshie; Funnell, Barbara E; Mizuuchi, Kiyoshi.

EMBO J ; 32(9): 1238-49, 2013 May 02.

Artigo em Inglês | MEDLINE | ID: mdl-23443047

6.

Dissection of the ATPase active site of P1 ParA reveals multiple active forms essential for plasmid partition.

Vecchiarelli, Anthony G; Havey, James C; Ing, Lori L; Wong, Erin O Y; Waples, William G; Funnell, Barbara E.

J Biol Chem ; 288(24): 17823-31, 2013 Jun 14.

Artigo em Inglês | MEDLINE | ID: mdl-23632076

7.

ATP-regulated interactions between P1 ParA, ParB and non-specific DNA that are stabilized by the plasmid partition site, parS.

Havey, James C; Vecchiarelli, Anthony G; Funnell, Barbara E.

Nucleic Acids Res ; 40(2): 801-12, 2012 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-21965538

8.

Surfing biological surfaces: exploiting the nucleoid for partition and transport in bacteria.

Vecchiarelli, Anthony G; Mizuuchi, Kiyoshi; Funnell, Barbara E.

Mol Microbiol ; 86(3): 513-23, 2012 Nov.

Artigo em Inglês | MEDLINE | ID: mdl-22934804

9.

Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA.

Dunham, Thomas D; Xu, Weijun; Funnell, Barbara E; Schumacher, Maria A.

EMBO J ; 28(12): 1792-802, 2009 Jun 17.

Artigo em Inglês | MEDLINE | ID: mdl-19461582

10.

Probing the N-terminus of ParB using cysteine-scanning mutagenesis and thiol modification.

Vecchiarelli, Anthony G; Funnell, Barbara E.

Plasmid ; 70(1): 86-93, 2013 Jul.

Artigo em Inglês | MEDLINE | ID: mdl-23428603

11.

Switching modes of chromosome dynamics in the bacterial cell cycle.

Funnell, Barbara E.

Proc Natl Acad Sci U S A ; 111(35): 12580-1, 2014 Sep 02.

Artigo em Inglês | MEDLINE | ID: mdl-25157151

12.

Chromosome dynamics: Rearranging the choreography of a multipartite bacterial genome.

Funnell, Barbara E.

Curr Biol ; 32(16): R889-R891, 2022 08 22.

Artigo em Inglês | MEDLINE | ID: mdl-35998600

13.

ATP control of dynamic P1 ParA-DNA interactions: a key role for the nucleoid in plasmid partition.

Vecchiarelli, Anthony G; Han, Yong-Woon; Tan, Xin; Mizuuchi, Michiyo; Ghirlando, Rodolfo; Biertümpfel, Christian; Funnell, Barbara E; Mizuuchi, Kiyoshi.

Mol Microbiol ; 78(1): 78-91, 2010 Oct.

Artigo em Inglês | MEDLINE | ID: mdl-20659294

14.

Structures of ParB bound to DNA reveal mechanism of partition complex formation.

Schumacher, Maria A; Funnell, Barbara E.

Nature ; 438(7067): 516-9, 2005 Nov 24.

Artigo em Inglês | MEDLINE | ID: mdl-16306995

15.

Plasmid Localization and Partition in Enterobacteriaceae.

Bouet, Jean-Yves; Funnell, Barbara E.

EcoSal Plus ; 8(2)2019 06.

Artigo em Inglês | MEDLINE | ID: mdl-31187729

16.

ParB Partition Proteins: Complex Formation and Spreading at Bacterial and Plasmid Centromeres.

Funnell, Barbara E.

Front Mol Biosci ; 3: 44, 2016.

Artigo em Inglês | MEDLINE | ID: mdl-27622187

17.

An unexpected cofactor.

Funnell, Barbara E.

Science ; 366(6469): 1072-1073, 2019 11 29.

Artigo em Inglês | MEDLINE | ID: mdl-31780543

18.

Plasmid Partition Mechanisms.

Baxter, Jamie C; Funnell, Barbara E.

Microbiol Spectr ; 2(6)2014 Dec.

Artigo em Inglês | MEDLINE | ID: mdl-26104442

19.

ParAB-mediated intermolecular association of plasmid P1 parS sites.

Kaur, Tranum; Al Abdallah, Qusai; Nafissi, Nafiseh; Wettig, Shawn; Funnell, Barbara E; Slavcev, Roderick A.

Virology ; 421(2): 192-201, 2011 Dec 20.

Artigo em Inglês | MEDLINE | ID: mdl-22018490

20.

P1 partition complex assembly involves several modes of protein-DNA recognition.

Vecchiarelli, Anthony G; Schumacher, Maria A; Funnell, Barbara E.

J Biol Chem ; 282(15): 10944-52, 2007 Apr 13.

Artigo em Inglês | MEDLINE | ID: mdl-17308337

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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata.

Coordinating plasmid partition with bacterial chromosome segregation.

How to build segregation complexes in bacteria: Use bridges.

Nonspecific DNA binding by P1 ParA determines the distribution of plasmid partition and repressor activities.

ParA-mediated plasmid partition driven by protein pattern self-organization.

Dissection of the ATPase active site of P1 ParA reveals multiple active forms essential for plasmid partition.

ATP-regulated interactions between P1 ParA, ParB and non-specific DNA that are stabilized by the plasmid partition site, parS.

Surfing biological surfaces: exploiting the nucleoid for partition and transport in bacteria.

Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA.

Probing the N-terminus of ParB using cysteine-scanning mutagenesis and thiol modification.

Switching modes of chromosome dynamics in the bacterial cell cycle.

Chromosome dynamics: Rearranging the choreography of a multipartite bacterial genome.

ATP control of dynamic P1 ParA-DNA interactions: a key role for the nucleoid in plasmid partition.

Structures of ParB bound to DNA reveal mechanism of partition complex formation.

Plasmid Localization and Partition in Enterobacteriaceae.

ParB Partition Proteins: Complex Formation and Spreading at Bacterial and Plasmid Centromeres.

An unexpected cofactor.

Plasmid Partition Mechanisms.

ParAB-mediated intermolecular association of plasmid P1 parS sites.

P1 partition complex assembly involves several modes of protein-DNA recognition.