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1.
J Virol ; 89(2): 1083-93, 2015 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-25378496

RESUMO

UNLABELLED: Iron is an essential nutrient for nearly all living organisms, including both hosts and invaders. Proteins such as ferritin regulate the iron levels in a cell, and in the event of a pathogenic invasion, the host can use an iron-withholding mechanism to restrict the availability of this essential nutrient to the invading pathogens. However, pathogens use various strategies to overcome this host defense. In this study, we demonstrated that white spot syndrome virus (WSSV) protein kinase 1 (PK1) interacted with shrimp ferritin in the yeast two-hybrid system. A pulldown assay and 27-MHz quartz crystal microbalance (QCM) analysis confirmed the interaction between PK1 and both ferritin and apoferritin. PK1 did not promote the release of iron ions from ferritin, but it prevented apoferritin from binding ferrous ions. When PK1 was overexpressed in Sf9 cells, the cellular labile iron pool (LIP) levels were elevated significantly. Immunoprecipitation and atomic absorption spectrophotometry (AAS) further showed that the number of iron ions bound by ferritin decreased significantly at 24 h post-WSSV infection. Taken together, these results suggest that PK1 prevents apoferritin from iron loading, and thus stabilizes the cellular LIP levels, and that WSSV uses this novel mechanism to counteract the host cell's iron-withholding defense mechanism. IMPORTANCE: We show here that white spot syndrome virus (WSSV) ensures the availability of iron by using a previously unreported mechanism to defeat the host cell's iron-withholding defense mechanism. This defense is often implemented by ferritin, which can bind up to 4,500 iron atoms and acts to sequester free iron within the cell. WSSV's novel counterstrategy is mediated by a direct protein-protein interaction between viral protein kinase 1 (PK1) and host ferritin. PK1 interacts with both ferritin and apoferritin, suppresses apoferritin's ability to sequester free iron ions, and maintains the intracellular labile iron pool (LIP), and thus the availability of free iron is increased within cells.


Assuntos
Ferritinas/metabolismo , Interações Hospedeiro-Patógeno , Ferro/metabolismo , Proteínas Quinases/metabolismo , Proteínas Virais/metabolismo , Vírus da Síndrome da Mancha Branca 1/fisiologia , Animais , Linhagem Celular , Centrifugação , Mecanismos de Defesa , Ligação Proteica , Mapeamento de Interação de Proteínas , Técnicas de Microbalança de Cristal de Quartzo , Técnicas do Sistema de Duplo-Híbrido
2.
BMC Genomics ; 15: 628, 2014 Jul 25.
Artigo em Inglês | MEDLINE | ID: mdl-25063321

RESUMO

BACKGROUND: Penaeus monodon nudivirus (PmNV) is the causative agent of spherical baculovirosis in shrimp (Penaeus monodon). This disease causes significant mortalities at the larval stage and early postlarval (PL) stage and may suppress growth and reduce survival and production in aquaculture. The nomenclature and classification status of PmNV has been changed several times due to morphological observation and phylogenetic analysis of its partial genome sequence. In this study, we therefore completed the genome sequence and constructed phylogenetic trees to clarify PmNV's taxonomic position. To better understand the characteristics of the occlusion bodies formed by this marine occluded virus, we also compared the chemical properties of the polyhedrin produced by PmNV and the baculovirus AcMNPV (Autographa californica nucleopolyhedrovirus). RESULTS: We used next generation sequencing and traditional PCR methods to obtain the complete PmNV genome sequence of 119,638 bp encoding 115 putative ORFs. Phylogenetic tree analysis showed that several PmNV genes and sequences clustered with the non-occluded nudiviruses and not with the baculoviruses. We also investigated the characteristics of PmNV polyhedrin, which is a functionally important protein and the major component of the viral OBs (occlusion bodies). We found that both recombinant PmNV polyhedrin and wild-type PmNV OBs were sensitive to acid conditions, but unlike the baculoviral OBs, they were not susceptible to alkali treatment. CONCLUSIONS: From the viral genome features and phylogenetic analysis we conclude that PmNV is not a baculovirus, and that it should be assigned to the proposed Nudiviridae family with the other nudiviruses, but into a distinct new genus (Gammanudivirus).


Assuntos
Organismos Aquáticos/virologia , Baculoviridae/genética , Baculoviridae/fisiologia , Genômica , Penaeidae/virologia , Animais , Baculoviridae/classificação , Baculoviridae/metabolismo , RNA Polimerases Dirigidas por DNA/genética , RNA Polimerases Dirigidas por DNA/metabolismo , Genoma Viral/genética , Sequenciamento de Nucleotídeos em Larga Escala , Dados de Sequência Molecular , Boca/virologia , Fases de Leitura Aberta/genética , Filogenia , Subunidades Proteicas/genética , Subunidades Proteicas/metabolismo , Sequências Repetitivas de Ácido Nucleico/genética , Homologia de Sequência do Ácido Nucleico , Especificidade da Espécie , Proteínas Virais/genética , Proteínas Virais/metabolismo , Montagem de Vírus/genética
3.
J Virol ; 87(24): 13263-78, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-24089551

RESUMO

Although shrimp white spot syndrome virus (WSSV) is a large double-stranded DNA virus (∼300 kbp), it expresses many polycistronic mRNAs that are likely to use internal ribosome entry site (IRES) elements for translation. A polycistronic mRNA encodes the gene of the highly expressed nonstructural protein ICP35, and here we use a dual-luciferase assay to demonstrate that this protein is translated cap independently by an IRES element located in the 5' untranslated region of icp35. A deletion analysis of this region showed that IRES activity was due to stem-loops VII and VIII. A promoterless assay, a reverse transcription-PCR together with quantitative real-time PCR analysis, and a stable stem-loop insertion upstream of the Renilla luciferase open reading frame were used, respectively, to rule out the possibility that cryptic promoter activity, abnormal splicing, or read-through was contributing to the IRES activity. In addition, a Northern blot analysis was used to confirm that only a single bicistronic mRNA was expressed. The importance of ICP35 to viral replication was demonstrated in a double-stranded RNA (dsRNA) interference knockdown experiment in which the mortality of the icp35 dsRNA group was significantly reduced. Tunicamycin was used to show that the α subunit of eukaryotic initiation factor 2 is required for icp35 IRES activity. We also found that the intercalating drug quinacrine significantly inhibited icp35 IRES activity in vitro and reduced the mortality rate and viral copy number in WSSV-challenged shrimp. Lastly, in Sf9 insect cells, we found that knockdown of the gene for the Spodoptera frugiperda 40S ribosomal protein RPS10 decreased icp35 IRES-regulated firefly luciferase activity but had no effect on cap-dependent translation.


Assuntos
Penaeidae/virologia , Biossíntese de Proteínas , Ribossomos/genética , Proteínas não Estruturais Virais/genética , Vírus da Síndrome da Mancha Branca 1/genética , Regiões 5' não Traduzidas , Animais , Regulação Viral da Expressão Gênica , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , RNA Viral/genética , RNA Viral/metabolismo , Ribossomos/metabolismo , Proteínas não Estruturais Virais/metabolismo , Vírus da Síndrome da Mancha Branca 1/metabolismo
4.
J Virol ; 85(7): 3517-25, 2011 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-21228234

RESUMO

High temperature (32 to 33°C) has been shown to reduce mortality in white spot syndrome virus (WSSV)-infected shrimps, but the mechanism still remains unclear. Here we show that in WSSV-infected shrimps cultured at 32°C, transcriptional levels of representative immediate-early, early, and late genes were initially higher than those at 25°C. However, neither the IE1 nor VP28 protein was detected at 32°C, suggesting that high temperature might inhibit WSSV protein synthesis. Two-dimensional gel electrophoresis analysis revealed two proteins, NAD-dependent aldehyde dehydrogenase (ALDH) and the proteasome alpha 4 subunit (proteasome α4), that were markedly upregulated in WSSV-infected shrimps at 32°C. Reverse transcription-PCR (RT-PCR) analysis of members of the heat shock protein family also showed that hsp70 was upregulated at 32°C. When aldh, proteasome α4, and hsp70 were knocked down by double-stranded RNA interference and shrimps were challenged with WSSV, the aldh and hsp70 knockdown shrimps became severely infected at 32°C, while the proteasome α4 knockdown shrimps remained uninfected. Our results therefore suggest that ALDH and Hsp70 both play an important role in the inhibition of WSSV replication at high temperature.


Assuntos
Aldeído Desidrogenase/metabolismo , Proteínas de Choque Térmico HSP70/metabolismo , Penaeidae/virologia , Temperatura , Replicação Viral/efeitos da radiação , Vírus da Síndrome da Mancha Branca 1/fisiologia , Vírus da Síndrome da Mancha Branca 1/efeitos da radiação , Animais , Eletroforese em Gel Bidimensional , Perfilação da Expressão Gênica , Técnicas de Silenciamento de Genes , Complexo de Endopeptidases do Proteassoma/metabolismo , Subunidades Proteicas/metabolismo , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Proteínas Virais/metabolismo
5.
J Virol ; 85(13): 6535-47, 2011 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-21507980

RESUMO

We show here that the white spot syndrome virus (WSSV) immediate-early protein IE1 interacts with the Penaeus monodon TATA box-binding protein (PmTBP) and that this protein-protein interaction occurs in the absence of any other viral or cellular proteins or nucleic acids, both in vitro and in vivo. Mapping studies using enhanced green fluorescent protein (EGFP) fusion proteins containing truncations of IE1 and PmTBP delimited the interacting regions to amino acids (aa) 81 to 180 in IE1 and, except for aa 171 to 230, to aa 111 to 300 in PmTBP. A WSSV IE1 transactivation assay showed that large quantities (>800 ng) of the GAL4-IE1 plasmid caused "squelching" of the GAL4-IE1 activity and that this squelching effect was alleviated by the overexpression of PmTBP. Gene silencing of WSSV ie1 and PmTBP by pretreatment with double-stranded RNAs (dsRNAs) prior to WSSV challenge showed that the expression of these two target genes was specifically inhibited by their corresponding dsRNAs 72 and 96 h after dsRNA treatment. dsRNA silencing of ie1 and PmTBP expression also significantly reduced WSSV replication and the expression of the viral early gene dnapol (DNA polymerase gene). These results suggest that WSSV IE1 and PmTBP work cooperatively with each other during transcription initiation and, furthermore, that PmTBP is an important target for WSSV IE1's transactivation activity that can enhance viral gene expression and help in virus replication.


Assuntos
Regulação Viral da Expressão Gênica , Proteínas Imediatamente Precoces/metabolismo , Penaeidae/virologia , Proteína de Ligação a TATA-Box/metabolismo , Transativadores/metabolismo , Vírus da Síndrome da Mancha Branca 1/fisiologia , Sequência de Aminoácidos , Animais , Proteínas Imediatamente Precoces/genética , Dados de Sequência Molecular , Penaeidae/genética , Penaeidae/metabolismo , Alinhamento de Sequência , Análise de Sequência de DNA , TATA Box , Proteína de Ligação a TATA-Box/genética , Transativadores/genética , Ativação Transcricional , Proteínas Virais/genética , Proteínas Virais/metabolismo , Replicação Viral , Vírus da Síndrome da Mancha Branca 1/genética , Vírus da Síndrome da Mancha Branca 1/metabolismo
6.
Dis Aquat Organ ; 98(3): 193-9, 2012 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-22535869

RESUMO

White spot syndrome virus (WSSV) is a serious shrimp pathogen that has spread globally to all major shrimp farming areas, causing enormous economic losses. Here we investigate the role of hermit crabs in transmitting WSSV to Penaeus monodon brooders used in hatcheries in Vietnam. WSSV-free brooders became PCR-positive for WSSV within 2 to 14 d, and the source of infection was traced to hermit crabs being used as live feed. Challenging hermit crabs with WSSV confirmed their susceptibility to infection, but they remained tolerant to disease even at virus loads equivalent to those causing acute disease in shrimp. As PCR screening also suggests that WSSV infection occurs commonly in hermit crab populations in both Vietnam and Taiwan, their use as live feed for shrimp brooders is not recommended.


Assuntos
Ração Animal , Anomuros , Dieta , Penaeidae/virologia , Vírus da Síndrome da Mancha Branca 1/fisiologia , Animais , Aquicultura , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Fatores de Risco
7.
BMC Genomics ; 12: 242, 2011 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-21575266

RESUMO

BACKGROUND: The black tiger shrimp (Penaeus monodon) is one of the most important aquaculture species in the world, representing the crustacean lineage which possesses the greatest species diversity among marine invertebrates. Yet, we barely know anything about their genomic structure. To understand the organization and evolution of the P. monodon genome, a fosmid library consisting of 288,000 colonies and was constructed, equivalent to 5.3-fold coverage of the 2.17 Gb genome. Approximately 11.1 Mb of fosmid end sequences (FESs) from 20,926 non-redundant reads representing 0.45% of the P. monodon genome were obtained for repetitive and protein-coding sequence analyses. RESULTS: We found that microsatellite sequences were highly abundant in the P. monodon genome, comprising 8.3% of the total length. The density and the average length of microsatellites were evidently higher in comparison to those of other taxa. AT-rich microsatellite motifs, especially poly (AT) and poly (AAT), were the most abundant. High abundance of microsatellite sequences were also found in the transcribed regions. Furthermore, via self-BlastN analysis we identified 103 novel repetitive element families which were categorized into four groups, i.e., 33 WSSV-like repeats, 14 retrotransposons, 5 gene-like repeats, and 51 unannotated repeats. Overall, various types of repeats comprise 51.18% of the P. monodon genome in length. Approximately 7.4% of the FESs contained protein-coding sequences, and the Inhibitor of Apoptosis Protein (IAP) gene and the Innexin 3 gene homologues appear to be present in high abundance in the P. monodon genome. CONCLUSIONS: The redundancy of various repeat types in the P. monodon genome illustrates its highly repetitive nature. In particular, long and dense microsatellite sequences as well as abundant WSSV-like sequences highlight the uniqueness of genome organization of penaeid shrimp from those of other taxa. These results provide substantial improvement to our current knowledge not only for shrimp but also for marine crustaceans of large genome size.


Assuntos
Biblioteca Genômica , Genômica , Penaeidae/genética , Plasmídeos/genética , Animais , Sequência de Bases , Feminino , Repetições de Microssatélites/genética , Fases de Leitura Aberta/genética , Análise de Sequência de DNA
8.
J Virol ; 82(22): 11362-73, 2008 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-18768963

RESUMO

Immediate-early proteins from many viruses function as transcriptional regulators and exhibit transactivation activity, DNA binding activity, and dimerization. In this study, we investigated these characteristics in white spot syndrome virus (WSSV) immediate-early protein 1 (IE1) and attempted to map the corresponding functional domains. Transactivation was investigated by transiently expressing a protein consisting of the DNA binding domain of the yeast transactivator GAL4 fused to full-length IE1. This GAL4-IE1 fusion protein successfully activated the Autographa californica multicapsid nucleopolyhedrovirus p35 basal promoter when five copies of the GAL4 DNA binding site were inserted upstream of the TATA box. A deletion series of GAL4-IE1 fusion proteins suggested that the transactivation domain of WSSV IE1 was carried within its first 80 amino acids. A point mutation assay further showed that all 12 of the acidic residues in this highly acidic domain were important for IE1's transactivation activity. DNA binding activity was confirmed by an electrophoresis mobility shift assay using a probe with (32)P-labeled random oligonucleotides. The DNA binding region of WSSV IE1 was located in its C-terminal end (amino acids 81 to 224), but mutation of a putative zinc finger motif in this C-terminal region suggested that this motif was not directly involved in the DNA binding activity. A homotypic interaction between IE1 molecules was demonstrated by glutathione S-transferase pull-down assay and a coimmunoprecipitation analysis. A glutaraldehyde cross-linking experiment and gel filtration analysis showed that this self-interaction led to the formation of stable IE1 dimers.


Assuntos
DNA Viral/metabolismo , Proteínas Imediatamente Precoces/metabolismo , Ativação Transcricional , Vírus da Síndrome da Mancha Branca 1/fisiologia , Animais , Sítios de Ligação , Linhagem Celular , Dimerização , Ensaio de Desvio de Mobilidade Eletroforética , Expressão Gênica , Imunoprecipitação , Ligação Proteica , Estrutura Terciária de Proteína , Deleção de Sequência , Spodoptera
9.
J Virol ; 82(24): 12555-64, 2008 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-18829765

RESUMO

In this study, we characterize a novel white spot syndrome virus (WSSV) structural protein, VP51A (WSSV-TW open reading frame 294), identified from a previous mass spectrometry study. Temporal-transcription analysis showed that vp51A is expressed in the late stage of WSSV infection. Gene structure analysis showed that the transcription initiation site of vp51A was 135 bp upstream of the translation start codon. The poly(A) addition signal overlapped with the translation stop codon, TAA, and the poly(A) tail was 23 bp downstream of the TAA. Western blot analysis of viral protein fractions and immunoelectron microscopy both suggested that VP51A is a viral envelope protein. Western blotting of the total proteins extracted from WSSV virions detected a band that was close to the predicted 51-kDa mass, but the strongest signal was around 72 kDa. We concluded that this 72-kDa band was in fact the full-length VP51A protein. Membrane topology assays demonstrated that the VP51A 72-kDa protein is a type II transmembrane protein with a highly hydrophobic transmembrane domain on its N terminus and a C terminus that is exposed on the surface of the virion. Coimmunoprecipitation, colocalization, and yeast two-hybrid assays revealed that VP51A associated directly with VP26 and indirectly with VP28, with VP26 acting as a linker protein in the formation of a VP51A-VP26-VP28 complex.


Assuntos
Proteínas do Capsídeo/metabolismo , Proteínas do Envelope Viral/metabolismo , Vírus da Síndrome da Mancha Branca 1/metabolismo , Sequência de Aminoácidos , Animais , Sequência de Bases , Proteínas do Capsídeo/genética , Microscopia Imunoeletrônica , Dados de Sequência Molecular , Peso Molecular , Penaeidae , Ligação Proteica , Transcrição Gênica/genética , Proteínas do Envelope Viral/química , Proteínas do Envelope Viral/genética , Proteínas do Envelope Viral/ultraestrutura , Vírion/metabolismo , Vírus da Síndrome da Mancha Branca 1/genética
10.
Dev Comp Immunol ; 32(5): 476-86, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-17905432

RESUMO

Caspases play a central and evolutionarily conserved role in mediating and executing apoptosis. Here, we report the cloning and characterization of a caspase from Penaeus monodon, Pm caspase. The full-length Pm caspase cDNA is 1386bp, encoding a polypeptide of 304 amino acids with a calculated molecular mass of 34.3kDa. BLASTP analysis against the NCBI nr database showed that Pm caspase is similar to insect effector caspases. RT-PCR analysis showed that Pm caspase mRNA is expressed in all examined tissues. When Pm caspase was overexpressed in SF-9 cells, the cells showed apoptotic morphological features, including the formation of apoptotic bodies and DNA ladders. The caspase-3 activity of Pm caspase was determined using the recombinant protein purified from Escherichia coli. Both RT-PCR and qRT-PCR analyses showed that the RNA levels of Pm caspase and P. monodon inhibitor of apoptosis protein (PmIAP) remained unchanged after white spot syndrome virus (WSSV) infection. We also used Pm caspase to show that WSSV449, an anti-apoptosis protein encoded by WSSV, is a direct caspase inhibitor.


Assuntos
Inibidores de Caspase , Proteínas Inibidoras de Apoptose/fisiologia , Penaeidae/enzimologia , Penaeidae/virologia , Proteínas Virais/fisiologia , Vírus da Síndrome da Mancha Branca 1/fisiologia , Sequência de Aminoácidos , Animais , Apoptose , Sequência de Bases , Caspases/química , Caspases/genética , Dados de Sequência Molecular , RNA Mensageiro/análise , Spodoptera , Distribuição Tecidual
11.
Dev Comp Immunol ; 32(2): 121-33, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-17628672

RESUMO

The inhibitor of apoptosis proteins (IAPs) play important roles in both apoptosis and innate immunity. Here, we report the first cloning and characterization of a novel IAP family member, PmIAP, from Penaeus monodon. The full-length PmIAP cDNA is 4769bp, with an ORF encoding a protein of 698 amino acids. The PmIAP protein contains three BIR domains and a C-terminal RING domain, and its mRNA was expressed in all analyzed tissues. In insect cells, PmIAP, together with Spodoptera frugiperda IAP, AcMNPV P35, and WSSV449 (or ORF390, an anti-apoptosis protein encoded by white spot syndrome virus), could all block the apoptosis induced by Drosophila Reaper protein (Rpr), whereas only P35 and WSSV449 could block the apoptosis induced by actinomycin D. Co-immunoprecipitation showed that PmIAP physically interacted with Rpr, and in an immunofluorescent analysis the two proteins produced co-localized punctate signals in the cytoplasm. Deletion analysis revealed that both the BIR2 and BIR3 domains of PmIAP could independently bind to and inhibit Rpr, whereas the BIR1 domain could not. These results strongly suggest that PmIAP blocks Rpr's pro-apoptotic activity through mechanisms that are evolutionarily conserved across crustaceans, insects, and mammals.


Assuntos
Apoptose , Proteínas Inibidoras de Apoptose/metabolismo , Penaeidae/química , Sequência de Aminoácidos , Animais , Linhagem Celular , Clonagem Molecular , DNA Complementar , Dactinomicina/farmacologia , Proteínas de Drosophila/metabolismo , Proteínas de Drosophila/farmacologia , Proteínas Inibidoras de Apoptose/química , Proteínas Inibidoras de Apoptose/genética , Proteínas Inibidoras de Apoptose/farmacologia , Dados de Sequência Molecular , Estrutura Terciária de Proteína , Inibidores da Síntese de Proteínas/farmacologia , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Alinhamento de Sequência
12.
Dev Comp Immunol ; 32(10): 1142-50, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-18460415

RESUMO

Although the JAK/STAT signaling pathway is usually involved in antiviral defense, a recent study suggested that STAT might be annexed by WSSV (white spot syndrome virus) to enhance the expression of a viral immediate early gene in infected shrimps. In the present study, we clone and report the first full-length cDNA sequence for a crustacean STAT from Penaeus monodon. Alignment and comparison with the deduced amino acid sequences of other STATs identified several important conserved residues and functional domains, including the DNA binding domain, SH2 domain and C-terminal transactivation domain. Based on these conserved sequences, a phylogenetic analysis suggested that shrimp STAT belongs to the ancient STAT family, while the presence of the functional domains suggested that shrimp STAT might share similar functions and regulating mechanisms with the well-known STATs isolated from model organisms. Real-time PCR showed a decreased transcription level of shrimp STAT after WSSV infection, but a Western blot analysis using anti-phosphorylated STAT antibody showed an increased level of phosphorylated (activated) STAT in the lymphoid organ of shrimp after WSSV infection. We further show that a primary culture of lymphoid organ cells from WSSV-infected shrimp resulted in activated STAT being translocated from the cytoplasm to the nucleus. This report provides experimental evidence that shrimp STAT is activated in response to WSSV infection. Our results support an earlier finding that WSSV does not disrupt JAK/STAT pathway, but on the contrary benefits from STAT activation in the shrimp host.


Assuntos
Penaeidae/metabolismo , Penaeidae/virologia , Fatores de Transcrição STAT/metabolismo , Vírus da Síndrome da Mancha Branca 1/fisiologia , Transporte Ativo do Núcleo Celular , Sequência de Aminoácidos , Animais , Anticorpos/imunologia , Humanos , Dados de Sequência Molecular , Penaeidae/química , Penaeidae/genética , Filogenia , RNA Mensageiro , Fatores de Transcrição STAT/química , Fatores de Transcrição STAT/genética , Fatores de Transcrição STAT/imunologia , Alinhamento de Sequência , Transcrição Gênica/genética
13.
BMC Genomics ; 8: 120, 2007 May 16.
Artigo em Inglês | MEDLINE | ID: mdl-17506900

RESUMO

BACKGROUND: White spot syndrome (WSS) is a viral disease that affects most of the commercially important shrimps and causes serious economic losses to the shrimp farming industry worldwide. However, little information is available in terms of the molecular mechanisms of the host-virus interaction. In this study, we used an expressed sequence tag (EST) approach to observe global gene expression changes in white spot syndrome virus (WSSV)-infected postlarvae of Penaeus monodon. RESULTS: Sequencing of the complementary DNA clones of two libraries constructed from normal and WSSV-infected postlarvae produced a total of 15,981 high-quality ESTs. Of these ESTs, 46% were successfully matched against annotated genes in National Center of Biotechnology Information (NCBI) non-redundant (nr) database and 44% were functionally classified using the Gene Ontology (GO) scheme. Comparative EST analyses suggested that, in postlarval shrimp, WSSV infection strongly modulates the gene expression patterns in several organs or tissues, including the hepatopancreas, muscle, eyestalk and cuticle. Our data suggest that several basic cellular metabolic processes are likely to be affected, including oxidative phosphorylation, protein synthesis, the glycolytic pathway, and calcium ion balance. A group of immune-related chitin-binding protein genes is also likely to be strongly up regulated after WSSV infection. A database containing all the sequence data and analysis results is accessible at http://xbio.lifescience.ntu.edu.tw/pm/. CONCLUSION: This study suggests that WSSV infection modulates expression of various kinds of genes. The predicted gene expression pattern changes not only reflect the possible responses of shrimp to the virus infection but also suggest how WSSV subverts cellular functions for virus multiplication. In addition, the ESTs reported in this study provide a rich source for identification of novel genes in shrimp.


Assuntos
Perfilação da Expressão Gênica , Penaeidae/genética , Penaeidae/virologia , Vírus da Síndrome da Mancha Branca 1/fisiologia , Actinas/genética , Animais , Sequência de Bases , DNA Complementar/química , DNA Complementar/genética , Etiquetas de Sequências Expressas , Regulação da Expressão Gênica , Biblioteca Gênica , Glicólise/genética , Lectinas Tipo C/genética , Análise de Sequência de DNA
14.
Dev Comp Immunol ; 31(7): 672-86, 2007.
Artigo em Inglês | MEDLINE | ID: mdl-17188354

RESUMO

To better understand the pathogenesis of white spot syndrome virus (WSSV) and to determine which cell pathways might be affected after WSSV infection, two-dimensional gel electrophoresis (2-DE) was used to produce protein expression profiles from samples taken at 48 h post-infection (hpi) from the stomachs of Litopenaeus vannamei (also called Penaeus vannamei) that were either specific pathogen free or else infected with WSSV. Seventy-five protein spots that consistently showed either a marked change (>50%) in accumulated levels or else were highly expressed throughout the course of WSSV infection were selected for further study. After in-gel trypsin digestion followed by LC-nanoESI-MS/MS, bioinformatics databases were searched for matches. A total of 53 proteins were identified, with functions that included energy production, calcium homeostasis, nucleic acid synthesis, signaling/communication, oxygen carrier/transportation, and SUMO-related modification. 2-DE results were shown to be consistent with relative EST database data from a previously developed EST database of two Penaeus monodon cDNA libraries. For seven selected genes, 2-DE and EST data were also compared with transcriptional time-course RT-PCR data. This study is the first global analysis of differentially expressed proteins in WSSV-infected shrimp, and in addition to increasing our understanding of the molecular pathogenesis of this virus-associated shrimp disease, the results presented here should be useful both for identifying potential biomarkers and for developing antiviral measures.


Assuntos
Infecções por Vírus de DNA/metabolismo , Penaeidae/metabolismo , Penaeidae/virologia , Proteômica/métodos , Vírus da Síndrome da Mancha Branca 1/metabolismo , Animais , Infecções por Vírus de DNA/genética , Infecções por Vírus de DNA/virologia , Eletroforese em Gel Bidimensional , Etiquetas de Sequências Expressas , Perfilação da Expressão Gênica , Penaeidae/genética , RNA Mensageiro/biossíntese , RNA Mensageiro/genética , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Organismos Livres de Patógenos Específicos , Vírus da Síndrome da Mancha Branca 1/genética
15.
Dis Aquat Organ ; 74(3): 179-89, 2007 Mar 13.
Artigo em Inglês | MEDLINE | ID: mdl-17465303

RESUMO

This study investigates white spot syndrome virus (WSSV) gene expression levels in the cells of 2 hosts (Penaeus monodon and Litopenaeus vannamei). Microarray and expressed sequence tag (EST) analysis of the mRNA profiles in WSSV-infected P. monodon cells were used to identify WSSV genes that were very highly expressed. Results showed that the mRNA of the WSSV icp11 gene consistently had the highest copy number of all (3x higher than the major envelope protein, VP28). At the protein level in WSSV-infected L. vannamei, 2-dimensional gel analysis and liquid chromatography-nano-electrospray ionization tandem mass spectrometry (LC-nanoESI-MS/MS) protein identification also showed that this WSSV non-structural protein has the highest expression levels reported to date. ICP11 is capable of self-multimerization, and it becomes located in both the cytoplasm and nucleus of the host cell. These data suggest that ICP11 plays an important, but presently unknown, role during viral infection, and that expression of the WSSV icp11 gene/WSSV ICP11 protein is potentially a good and diagnostically useful indicator of WSSV infection.


Assuntos
Regulação Viral da Expressão Gênica , Penaeidae/virologia , Proteínas não Estruturais Virais/biossíntese , Proteínas não Estruturais Virais/genética , Vírus da Síndrome da Mancha Branca 1/genética , Sequência de Aminoácidos , Animais , Anticorpos Antivirais/análise , Anticorpos Antivirais/metabolismo , Sequência de Bases , Western Blotting , DNA Viral/química , Eletroforese em Gel Bidimensional , Etiquetas de Sequências Expressas , Fluoresceína-5-Isotiocianato/análise , Perfilação da Expressão Gênica , Brânquias/química , Brânquias/virologia , Hemócitos/virologia , Dados de Sequência Molecular , Análise Serial de Proteínas/veterinária , Proteínas não Estruturais Virais/análise , Proteínas não Estruturais Virais/metabolismo
16.
Front Immunol ; 8: 1084, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28932224

RESUMO

Members of the microRNA miR-10 family are highly conserved and play many important roles in diverse biological mechanisms, including immune-related responses and cancer-related processes in certain types of cancer. In this study, we found the most highly upregulated shrimp microRNA from Penaeus vannamei during white spot syndrome virus (WSSV) infection was miR-10a. After confirming the expression level of miR-10a by northern blot and quantitative RT-PCR, an in vivo experiment showed that the viral copy number was decreased in miR-10a-inhibited shrimp. We found that miR-10a targeted the 5' untranslated region (UTR) of at least three viral genes (vp26, vp28, and wssv102), and plasmids that were controlled by the 5' UTR of these genes produced enhanced luciferase signals in transfected SF9 cells. These results suggest a previously unreported role for shrimp miR-10a and even a new type of host-virus interaction, whereby a co-opts the key cellular regulator miR-10a to globally enhance the translation of viral proteins.

17.
PLoS One ; 11(6): e0156375, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27257954

RESUMO

White spot syndrome virus (WSSV, genus Whispovirus, family Nimaviridae) is causing huge economic losses in global shrimp farming, but there is no effective control. Shrimp cell laminin receptor (Lamr) may have a role in WSSV infection. The objective was to characterize interactions between Penaeus monodon Lamr (PmLamr) and WSSV structural proteins. In this study, PmLamr interacted with nine WSSV structural proteins (based on yeast two-hybrid screening), of which one (VP31) was characterized. Protein pull-down assay confirmed the interaction between PmLamr and VP31; the latter was an envelope protein exposed outside the WSSV virion (based on membrane topology assays). Furthermore, similar to mammalian Lamr, there were two major protein bands in shrimp cells. Cellular localization assay demonstrated VP31 co-localized with PmLamr on transfected cells. Enzyme-link immunosorbent assay (ELISA) and competitive ELISA demonstrated binding of VP31 on PmLamr was dose-dependent; however, addition of WSSV virion competed for binding affinity. Furthermore, based on an in vivo neutralization assay, both VP31 and PmLamr delayed mortality in shrimp challenged with WSSV. We concluded Lamr was an important receptor for WSSV infection and the viral envelope protein VP31 may have a role in host cell recognition and binding. These data contributed to elucidating pathogenesis of WSSV infection and may help in controlling this disease.


Assuntos
Penaeidae/metabolismo , Receptores de Laminina/metabolismo , Vírus da Síndrome da Mancha Branca 1/patogenicidade , Animais , Ensaio de Imunoadsorção Enzimática , Penaeidae/virologia , Ligação Proteica , Técnicas do Sistema de Duplo-Híbrido , Proteínas do Envelope Viral/metabolismo
18.
Sci Rep ; 6: 27732, 2016 06 09.
Artigo em Inglês | MEDLINE | ID: mdl-27279169

RESUMO

Levels of intracellular ROS (reactive oxygen species) were significantly increased in hemocytes collected from WSSV-infected shrimp within the first 30-120 min after infection. Measurement of the NADPH/NADP(+) and GSH/GSSG ratios revealed that after a significant imbalance toward the oxidized forms at 2 hpi, redox equilibrium was subsequently restored. Meanwhile, high levels of lactic acid production, elevated NADH/NAD(+) ratios, and metabolic changes in the glycolysis pathway show that the Warburg effect was triggered by the virus. The timing of these changes suggests that WSSV uses this metabolic shift into aerobic glycolysis to counteract the high levels of ROS produced in response to viral infection. We further show that if the Warburg effect is inhibited by chemical inhibition of the PI3K-Akt-mTOR signaling pathway, or if the pentose phosphate pathway is chemically inhibited, then in both cases, the production of intracellular ROS is sustained. We conclude that WSSV uses the PI3K-Akt-mTOR-regulated Warburg effect to restore host redox balance and to counter the ROS produced by the host in response to WSSV infection. We also found that pyruvate kinase activity was inhibited by WSSV. This inhibition is likely to increase the availability of the raw materials essential for WSSV gene expression and replication.


Assuntos
Proteínas de Artrópodes/metabolismo , Hemócitos/metabolismo , Penaeidae/virologia , Espécies Reativas de Oxigênio/metabolismo , Vírus da Síndrome da Mancha Branca 1/fisiologia , Animais , Glicólise , Estresse Oxidativo , Penaeidae/genética , Penaeidae/metabolismo , Via de Pentose Fosfato , Piruvato Quinase/metabolismo
19.
Dev Comp Immunol ; 49(1): 7-18, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25445906

RESUMO

A series of deletion and mutation assays of the white spot syndrome virus (WSSV) immediate-early gene WSSV108 promoter showed that a Krüppel-like factor (KLF) binding site located from -504 to -495 (relative to the transcription start site) is important for the overall level of WSSV108 promoter activity. Electrophoretic mobility shift assays further showed that overexpressed recombinant Penaeus monodon KLF (rPmKLF) formed a specific protein-DNA complex with the (32)P-labeled KLF binding site of the WSSV108 promoter, and that higher levels of Litopenaeus vannamei KLF (LvKLF) were expressed in WSSV-infected shrimp. A transactivation assay indicated that the WSSV108 promoter was strongly activated by rPmKLF in a dose-dependent manner. Lastly, we found that specific silencing of LvKLF expression in vivo by dsRNA injection dramatically reduced both WSSV108 expression and WSSV replication. We conclude that shrimp KLF is important for WSSV genome replication and gene expression, and that it binds to the WSSV108 promoter to enhance the expression of this immediate-early gene.


Assuntos
Proteínas de Artrópodes/metabolismo , Genes Precoces/genética , Fatores de Transcrição Kruppel-Like/metabolismo , Regiões Promotoras Genéticas/genética , Proteínas Virais/genética , Vírus da Síndrome da Mancha Branca 1/genética , Sequência de Aminoácidos , Animais , Proteínas de Artrópodes/genética , Sequência de Bases , Sítios de Ligação/genética , Western Blotting , Ensaio de Desvio de Mobilidade Eletroforética , Regulação Viral da Expressão Gênica , Interações Hospedeiro-Patógeno/genética , Proteínas Imediatamente Precoces , Fatores de Transcrição Kruppel-Like/genética , Dados de Sequência Molecular , Penaeidae/genética , Penaeidae/metabolismo , Penaeidae/virologia , Ligação Proteica , Interferência de RNA , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Ativação Transcricional , Proteínas Virais/metabolismo , Replicação Viral/genética , Vírus da Síndrome da Mancha Branca 1/metabolismo , Vírus da Síndrome da Mancha Branca 1/fisiologia
20.
Dis Aquat Organ ; 49(3): 199-206, 2002 Jun 03.
Artigo em Inglês | MEDLINE | ID: mdl-12113306

RESUMO

The ribosomal RNA (rRNA) gene region of the microsporidium Heterosporis anguillarum has been examined. Complete DNA sequence data (4060 bp, GenBank Accession No. AF402839) of the rRNA gene of H. anguillarum are presented for the small subunit gene (SSU rRNA: 1359 bp), the internal transcribed spacer (ITS: 37 bp), and the large subunit gene (LSU rRNA: 2664 bp). The secondary structures of the H. anguillarum SSU and LSU rRNA genes are constructed and described. This is the first complete sequence of an rRNA gene published for a fish-infecting microsporidian species. In the phylogenetic analysis, the sequences, including partial SSU rRNA, ITS, and partial LSU rRNA sequences of the fish-infecting microsporidia, were aligned and analysed. The taxonomic position of H. anguillarum as suggested by Lom et al. (2000; Dis Aquat Org 43:225-231) is confirmed in this paper.


Assuntos
Anguilla/parasitologia , DNA Ribossômico/química , Doenças dos Peixes/diagnóstico , Microsporídios/genética , Microsporidiose/veterinária , RNA Ribossômico/genética , Animais , Sequência de Bases , Doenças dos Peixes/parasitologia , Microsporídios/classificação , Microsporidiose/diagnóstico , Microsporidiose/parasitologia , Dados de Sequência Molecular , Conformação de Ácido Nucleico , Filogenia , Reação em Cadeia da Polimerase/veterinária , RNA Ribossômico/química
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