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1.
Am J Transplant ; 17(9): 2458-2467, 2017 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-28510335

RESUMO

Biomarker profiles of acute rejection in liver transplant recipients could enhance the diagnosis and management of recipients. Our aim was to identify diagnostic proteoform signatures of acute rejection in circulating immune cells, using an emergent "top-down" proteomics methodology. We prepared differentially processed and cryopreserved cell lysates from 26 nonviral liver transplant recipients by molecular weight-based fractionation and analyzed them by mass spectrometry of whole proteins in three steps: (i) Nanocapillary liquid chromatography coupled with high-resolution tandem mass spectrometry; (ii) database searching to identify and characterize intact proteoforms; (iii) data processing through a hierarchical linear model matching the study design to quantify proteoform fold changes in patients with rejection versus normal liver function versus acute dysfunction without rejection. Differentially expressed proteoforms were seen in patients with rejection versus normal and nonspecific controls, most evidently in the cell preparations stored in traditional serum-rich media. Mapping analysis of these proteins back to genes through gene ontology and pathway analysis tools revealed multiple signaling pathways, including inflammation mediated by cytokines and chemokines. Larger studies are needed to validate these novel rejection signatures and test their predictive value for use in clinical management.


Assuntos
Biomarcadores/sangue , Rejeição de Enxerto/diagnóstico , Leucócitos Mononucleares/metabolismo , Transplante de Fígado/efeitos adversos , Proteoma/análise , Bases de Dados de Proteínas , Feminino , Rejeição de Enxerto/sangue , Rejeição de Enxerto/etiologia , Humanos , Masculino , Pessoa de Meia-Idade , Prognóstico , Isoformas de Proteínas , Proteômica
2.
Mol Ecol ; 26(3): 740-751, 2017 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-27891694

RESUMO

Many aspects of blue whale biology are poorly understood. Some of the gaps in our knowledge, such as those regarding their basic taxonomy and seasonal movements, directly affect our ability to monitor and manage blue whale populations. As a step towards filling in some of these gaps, microsatellite and mtDNA sequence analyses were conducted on blue whale samples from the Southern Hemisphere, the eastern tropical Pacific (ETP) and the northeast Pacific. The results indicate that the ETP is differentially used by blue whales from the northern and southern eastern Pacific, with the former showing stronger affinity to the region off Central America known as the Costa Rican Dome, and the latter favouring the waters of Peru and Ecuador. Although the pattern of genetic variation throughout the Southern Hemisphere is compatible with the recently proposed subspecies status of Chilean blue whales, some discrepancies remain between catch lengths and lengths from aerial photography, and not all blue whales in Chilean waters can be assumed to be of this type. Also, the range of the proposed Chilean subspecies, which extends to the Galapagos region of the ETP, at least seasonally, perhaps should include the Costa Rican Dome and the eastern North Pacific as well.


Assuntos
Balaenoptera/genética , Variação Genética , Genética Populacional , Migração Animal , Animais , América Central , Chile , DNA Mitocondrial/genética , Equador , Repetições de Microssatélites , Oceano Pacífico , Peru
3.
Mol Ecol ; 23(24): 5998-6010, 2014 12.
Artigo em Inglês | MEDLINE | ID: mdl-25492593

RESUMO

Blue whales (Balaenoptera musculus) were among the most intensively exploited species of whales in the world. As a consequence of this intense exploitation, blue whale sightings off the coast of Chile were uncommon by the end of the 20th century. In 2004, a feeding and nursing ground was reported in southern Chile (SCh). With the aim to investigate the genetic identity and relationship of these Chilean blue whales to those in other Southern Hemisphere areas, 60 biopsy samples were collected from blue whales in SCh between 2003 and 2009. These samples were genotyped at seven microsatellite loci and the mitochondrial control region was sequenced, allowing us to identify 52 individuals. To investigate the genetic identity of this suspected remnant population, we compared these 52 individuals to blue whales from Antarctica (ANT, n = 96), Northern Chile (NCh, n = 19) and the eastern tropical Pacific (ETP, n = 31). No significant differentiation in haplotype frequencies (mtDNA) or among genotypes (nDNA) was found between SCh, NCh and ETP, while significant differences were found between those three areas and Antarctica for both the mitochondrial and microsatellite analyses. Our results suggest at least two breeding population units or subspecies exist, which is also supported by other lines of evidence such as morphometrics and acoustics. The lack of differences detected between SCh/NCh/ETP areas supports the hypothesis that eastern South Pacific blue whales are using the ETP area as a possible breeding area. Considering the small population sizes previously reported for the SCh area, additional conservation measures and monitoring of this population should be developed and prioritized.


Assuntos
Balaenoptera/genética , Genética Populacional , Migração Animal , Animais , Regiões Antárticas , Teorema de Bayes , Núcleo Celular/genética , Chile , Análise por Conglomerados , DNA Mitocondrial/genética , Feminino , Fluxo Gênico , Variação Genética , Genótipo , Haplótipos , Masculino , Repetições de Microssatélites , Oceano Pacífico , Análise de Sequência de DNA
4.
Am J Transplant ; 12(12): 3326-36, 2012 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-22947444

RESUMO

The number of older adults undergoing kidney transplantation has increased, yet little is known about calcineurin inhibitor (CNI) metabolism in this group. We studied CNI troughs and doses to determine if there were age-related differences in metabolism and dose requirements. We studied 348 young (18-34 years), 1831 middle (35-64 years) and 374 older (65-84 years) adult kidney transplant recipients enrolled in a seven-center prospective study. Troughs were obtained from each patient 2×/week in weeks 1-8 and 2×/month in months 3-6. A multivariable linear-mixed model examined the effect of age on log dose and weight normalized troughs. Older recipients had higher normalized tacrolimus troughs than middle or young age adults despite receiving doses a median of 1-2 mg/day lower. Age and CYP3A5*1 genotype had the largest effect on tacrolimus troughs. Older recipients also had higher normalized cyclosporine troughs than middle or young adults despite receiving median doses 100 mg/day lower. After normalization for dose and weight, CNI troughs were more than 50% higher in older adults than young adults. These data support age-related changes in CNI metabolism. Further studies are needed to determine optimal dosing of CNIs in the elderly.


Assuntos
Inibidores de Calcineurina , Imunossupressores/administração & dosagem , Transplante de Rim , Adolescente , Adulto , Fatores Etários , Idoso , Idoso de 80 Anos ou mais , Calcineurina/metabolismo , Ciclosporina/administração & dosagem , Ciclosporina/farmacocinética , Citocromo P-450 CYP3A/genética , Feminino , Variação Genética/genética , Humanos , Imunossupressores/farmacocinética , Masculino , Pessoa de Meia-Idade , Prognóstico , Estudos Prospectivos , Tacrolimo/administração & dosagem , Tacrolimo/farmacocinética , Distribuição Tecidual , Adulto Jovem
5.
Am J Transplant ; 10(2): 315-23, 2010 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-20041864

RESUMO

The nonspecific diagnoses 'chronic rejection''CAN', or 'IF/TA' suggest neither identifiable pathophysiologic mechanisms nor possible treatments. As a first step to developing a more useful taxonomy for causes of new-onset late kidney allograft dysfunction, we used cluster analysis of individual Banff score components to define subgroups. In this multicenter study, eligibility included being transplanted prior to October 1, 2005, having a 'baseline' serum creatinine < or =2.0 mg/dL before January 1, 2006, and subsequently developing deterioration of graft function leading to a biopsy. Mean time from transplant to biopsy was 7.5 +/- 6.1 years. Of the 265 biopsies (all with blinded central pathology interpretation), 240 grouped into six large (n > 13) clusters. There were no major differences between clusters in recipient demographics. The actuarial postbiopsy graft survival varied by cluster (p = 0.002). CAN and CNI toxicity were common diagnoses in each cluster (and did not differentiate clusters). Similarly, C4d and presence of donor specific antibody were frequently observed across clusters. We conclude that for recipients with new-onset late graft dysfunction, cluster analysis of Banff scores distinguishes meaningful subgroups with differing outcomes.


Assuntos
Análise por Conglomerados , Creatinina , Biópsia , Complemento C4b , Creatinina/sangue , Sobrevivência de Enxerto , Humanos , Fragmentos de Peptídeos , Insuficiência Renal/diagnóstico , Insuficiência Renal/patologia , Doadores de Tecidos , Resultado do Tratamento
6.
Am J Transplant ; 10(9): 2066-73, 2010 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-20883541

RESUMO

The Banff scoring schema provides a common ground to analyze kidney transplant biopsies. Interstitial inflammation (i) and tubulitis (t) in areas of viable tissue are features in scoring acute rejection, but are excluded in areas of tubular atrophy (TA). We studied inflammation and tubulitis in a cohort of kidney transplant recipients undergoing allograft biopsy for new-onset late graft dysfunction (N = 337). We found inflammation ('iatr') and tubulitis ('tatr') in regions of fibrosis and atrophy to be strongly correlated with each other (p < 0.0001). Moreover, iatr was strongly associated with death-censored graft failure when compared to recipients whose biopsies had no inflammation, even after adjusting for the presence of interstitial fibrosis (Hazard Ratio = 2.31, [1.10-4.83]; p = 0.0262) or TA (hazard ratio = 2.42, [1.16-5.08]; p = 0.191), serum creatinine at the time of biopsy, time to biopsy and i score. Further, these results did not qualitatively change after additional adjustments for C4d staining or donor specific antibody. Stepwise regression identified the most significant markers of graft failure which include iatr score. We propose that a more global assessment of inflammation in kidney allograft biopsies to include inflammation in atrophic areas may provide better prognostic information. Phenotypic characterization of these inflammatory cells and appropriate treatment may ameliorate late allograft failure.


Assuntos
Transplante de Rim/patologia , Túbulos Renais/patologia , Nefrite/patologia , Atrofia , Biópsia , Estudos de Coortes , Creatinina/sangue , Estudos Transversais , Feminino , Fibrose , Rejeição de Enxerto/mortalidade , Humanos , Técnicas In Vitro , Masculino , Nefrite/sangue , Valor Preditivo dos Testes , Modelos de Riscos Proporcionais , Medição de Risco , Índice de Gravidade de Doença , Transplante Homólogo
7.
Am J Transplant ; 10(2): 324-30, 2010 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-20055809

RESUMO

We are studying two cohorts of kidney transplant recipients, with the goal of defining specific clinicopathologic entities that cause late graft dysfunction: (1) prevalent patients with new onset late graft dysfunction (cross-sectional cohort); and (2) newly transplanted patients (prospective cohort). For the cross-sectional cohort (n = 440), mean time from transplant to biopsy was 7.5 +/- 6.1 years. Local pathology diagnoses included CAN (48%), CNI toxicity (30%), and perhaps surprisingly, acute rejection (cellular- or Ab-mediated) (23%). Actuarial rate of death-censored graft loss at 1 year postbiopsy was 17.7%; at 2 years, 29.8%. There was no difference in postbiopsy graft survival for recipients with versus without CAN (p = 0.9). Prospective cohort patients (n = 2427) developing graft dysfunction >3 months posttransplant undergo 'index' biopsy. The rate of index biopsy was 8.8% between 3 and 12 months, and 18.2% by 2 years. Mean time from transplant to index biopsy was 1.0 +/- 0.6 years. Local pathology diagnoses included CAN (27%), and acute rejection (39%). Intervention to halt late graft deterioration cannot be developed in the absence of meaningful diagnostic entities. We found CAN in late posttransplant biopsies to be of no prognostic value. The DeKAF study will provide broadly applicable diagnostic information to serve as the basis for future trials.


Assuntos
Sobrevivência de Enxerto/imunologia , Biópsia , Humanos , Prognóstico
8.
Osteoarthritis Cartilage ; 18(3): 455-63, 2010 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-19909832

RESUMO

OBJECTIVE: Glucosamine has been previously shown to suppress cartilage aggrecan catabolism in explant cultures. We determined the effect of glucosamine on ADAMTS5 (a disintegrin-like and metalloprotease domain (reprolysin type) with thrombospondin type-1 motifs 5), a major aggrecanase in osteoarthritis, and investigated a potential mechanism underlying the observed effects. DESIGN: HEK293F and CHO-K1 cells transiently transfected with ADAMTS5 cDNA were treated with glucosamine or the related hexosamine mannosamine. Glucosamine effects on FURIN transcription were determined by quantitative RT-PCR. Effects on furin-mediated processing of ADAMTS5 zymogen, and aggrecan processing by glucosamine-treated cells, were determined by western blotting. Post-translational modification of furin and N-glycan deficient furin mutants generated by site-directed mutagenesis was analyzed by western blotting, and the mutants were evaluated for their ADAMTS5 processing ability in furin-deficient CHO-RPE.40 cells. RESULTS: Ten mM glucosamine and 5-10mM mannosamine reduced excision of the ADAMTS5 propeptide, indicating interference with the propeptide excision mechanism, although mannosamine compromised cell viability at these doses. Although glucosamine had no effect on furin mRNA levels, western blot of furin from glucosamine-treated cells suggested altered post-translational modification. Glucosamine treatment led to decreased glycosylation of cellular furin, with reduced furin autoactivation as the consequence. Recombinant furin treated with peptide N-glycanase F had reduced activity against a synthetic peptide substrate. Indeed, site-directed mutagenesis of two furin N-glycosylation sites, Asn(387) and Asn(440), abrogated furin activation and this mutant was unable to rescue ADAMTS5 processing in furin-deficient cells. CONCLUSIONS: Ten mM glucosamine reduces excision of the ADAMTS5 propeptide via interference with post-translational modification of furin and leads to reduced aggrecanase activity of ADAMTS5.


Assuntos
Proteínas ADAM/efeitos dos fármacos , Furina/efeitos dos fármacos , Glucosamina/metabolismo , Proteína ADAMTS5 , Western Blotting , Células Cultivadas , Humanos , Processamento de Proteína Pós-Traducional , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Estatística como Assunto
9.
Am J Transplant ; 9(8): 1811-5, 2009 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-19519808

RESUMO

Death with function causes half of late kidney transplant failures, and cardiovascular disease (CVD) is the most common cause of death in these patients. We examined the use of potentially cardioprotective medications in a prospective observational study at seven transplant centers in the United States and Canada. Among 935 patients, 87% received antihypertensive medications at both 1 and 6 months after transplantation. Similar antihypertensive regimens were used for patients with and without diabetes and CVD, but with wide variability among centers. In contrast, while 44% of patients were on angiotensin converting enzyme inhibitors (ACEI) or angiotensin receptor blockers (ARB) at the time of transplantation, the proportion taking these agents dropped to 12% at month 1, then increased to 24% at 6 months. Fewer than 30% with CVD or diabetes received ACEI/ARB therapy 6 months posttransplant. Aspirin use was uncommon (<40% of patients). Even among those with diabetes and/or CVD, fewer than 60% received aspirin and only half received a statin at 1 and 6 months. This study demonstrates marked variability in the use of cardioprotective medications in kidney transplant recipients, a finding that may reflect, among several possible explanations, clinical uncertainty due the lack of randomized trials for these medications in this population.


Assuntos
Cardiotônicos/uso terapêutico , Doenças Cardiovasculares/etiologia , Doenças Cardiovasculares/prevenção & controle , Transplante de Rim/efeitos adversos , Adulto , Bloqueadores do Receptor Tipo 1 de Angiotensina II/uso terapêutico , Inibidores da Enzima Conversora de Angiotensina/uso terapêutico , Anti-Hipertensivos/uso terapêutico , Aspirina/uso terapêutico , Canadá , Estudos de Coortes , Estudos Transversais , Feminino , Humanos , Inibidores de Hidroximetilglutaril-CoA Redutases/uso terapêutico , Masculino , Pessoa de Meia-Idade , Estudos Prospectivos , Estados Unidos
10.
J Cell Biol ; 111(6 Pt 2): 2851-9, 1990 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-2269657

RESUMO

Extracts from BSC-40 cells infected with vaccinia recombinants expressing either the yeast KEX2 prohormone endoprotease or a human structural homologue (fur gene product) contained an elevated level of a membrane-associated endoproteolytic activity that could cleave at pairs of basic amino acids (-LysArg- and -ArgArg-). The fur-directed activity (furin) shared many properties with Kex2p including activity at pH 7.3 and a requirement for calcium. By using antifurin antibodies, immunoblot analysis detected two furin translation products (90 and 96 kD), while immunofluorescence indicated localization to the Golgi apparatus. Coexpression of either Kex2p or furin with the mouse beta-nerve growth factor precursor (pro-beta-NGF) resulted in greatly enhanced conversion of the precursor to mature nerve growth factor. Thus, the sequence homology shared by furin and the yeast KEX2 prohormone processing enzyme is reflected by significant functional homology both in vitro and in vivo.


Assuntos
Endopeptidases/genética , Proteínas de Membrana/genética , Fatores de Crescimento Neural/metabolismo , Pró-Proteína Convertases , Precursores de Proteínas/metabolismo , Proteínas de Saccharomyces cerevisiae , Subtilisinas/genética , Subtilisinas/fisiologia , Sequência de Aminoácidos , Endopeptidases/fisiologia , Proteínas Fúngicas/genética , Furina , Complexo de Golgi/enzimologia , Humanos , Proteínas de Membrana/fisiologia , Dados de Sequência Molecular , Saccharomyces cerevisiae/enzimologia , Serina Endopeptidases/fisiologia , Especificidade por Substrato
11.
Water Sci Technol ; 55(11): 73-9, 2007.
Artigo em Inglês | MEDLINE | ID: mdl-17591198

RESUMO

Tracer studies performed in two aerated facultative lagoons indicate some bypass and an overall hydraulic regime close to completely-mixed. Results were used to calibrate a hydraulic model based on the tanks-in-series approach. The hydraulic model was combined with a simple "death-regeneration" biokinetic model to simulate seasonal nitrification as observed over a three year period. Modifications were made to the hydraulic model to represent the effect of baffle installations to 1) eliminate bypass and 2) impose a plug-flow regime. Simulation results indicate there is some gain to eliminating bypass but that imposing a plug-flow regime would increase biomass washout rates and hinder nitrification.


Assuntos
Reatores Biológicos , Clima , Temperatura Baixa , Modelos Biológicos , Nitrogênio/metabolismo , Estações do Ano , Eliminação de Resíduos Líquidos/métodos , Simulação por Computador , Cinética , Oxigênio/análise , Eliminação de Resíduos Líquidos/instrumentação , Movimentos da Água
12.
Biochim Biophys Acta ; 1499(1-2): 74-84, 2000 Dec 11.
Artigo em Inglês | MEDLINE | ID: mdl-11118640

RESUMO

Glucose deprivation leads to the synthesis of an aberrantly glycosylated ('alternative') and inefficiently processed form of the insulin proreceptor in 3T3-L1 adipocytes. To further explore the effect of aberrant (rather than absent) N-linked glycosylation of the insulin receptor, we examined the relationship of processing to function. Our studies show that the alternative form of the proreceptor does not oligomerize nor does it acquire the ability to undergo insulin-sensitive autophosphorylation. This along with an interaction with the glucose-regulated stress protein GRP78/BiP implies inappropriate folding/dimerization and retention in the ER. Glucose refeeding causes the post-translational modification of the alternative form of the proreceptor to a novel 'intermediate' form which is independent of new protein synthesis. As little as 100 microM glucose (or mannose) can induce this modification. In vitro digestion of the alternative and intermediate proreceptors with SPC1/furin shows that both the alpha- and beta-subunit domains are glycosylated, albeit aberrantly. This implies that the aberrantly glycosylated proreceptor could serve as a substrate for SPC1 in a physiological setting if the receptor was able to interact with the enzyme in the appropriate compartment (i.e., the trans-Golgi network). Based on inhibitor studies, however, both the alternative and intermediate forms of the proreceptor appear to be primarily targeted to the proteasome for degradation.


Assuntos
Proteínas de Choque Térmico , Receptor de Insulina/metabolismo , Proteínas de Schizosaccharomyces pombe , Células 3T3 , Animais , Proteínas de Transporte/metabolismo , Compartimento Celular , Cisteína Endopeptidases/química , Relação Dose-Resposta a Droga , Chaperona BiP do Retículo Endoplasmático , Glucose/deficiência , Glucose/farmacologia , Glicosilação , Camundongos , Proteínas Quinases Ativadas por Mitógeno/química , Chaperonas Moleculares/metabolismo , Complexos Multienzimáticos/química , Fosforilação , Complexo de Endopeptidases do Proteassoma , Dobramento de Proteína , Precursores de Proteínas/biossíntese , Precursores de Proteínas/metabolismo , Receptor de Insulina/biossíntese , Receptor de Insulina/química , Transdução de Sinais
13.
Biochim Biophys Acta ; 1004(3): 327-31, 1989 Aug 22.
Artigo em Inglês | MEDLINE | ID: mdl-2758027

RESUMO

Studies were undertaken to assess the contribution of lipoprotein cholesterol to bile and to determine whether already-existent hepatic free cholesterol and the free cholesterol which is newly generated from the hydrolysis of hepatic cholesteryl esters are equally available for secretion into bile or constitute metabolically separate pools. Rats with a bile fistula were injected with an intravenous bolus of high-density lipoprotein recombinants containing free [14C]cholesterol and [3H]cholesteryl esters. Results showed (1) that bile free [14C]cholesterol secretion was a constant and linear proportion of the whole liver free [14C]cholesterol pool, (2) that secretion into bile of free [3H]cholesterol was in direct proportion to the rate of hydrolysis of hepatic [3H]cholesteryl esters, and (3) that rates of biliary cholesterol secretion were very similar when secretion was calculated using the specific activity of free [14C]cholesterol and free [3H]cholesterol in the entire liver to 'label' the precursor free cholesterol pool. Furthermore, rates of secretion that were calculated using either isotope closely approximated the mass of free cholesterol that was directly measured in bile. Results thus indicate that because of equilibration and extensive dilution by the large pool of already-existent free cholesterol, the transport of isotopic cholesterol from lipoproteins cannot be used to directly assess the contribution of lipoprotein cholesterol to the cholesterol that is secreted in bile. These studies further suggest that the totality of preformed free cholesterol in the liver is in metabolic equilibrium in one single kinetic pool and that all hepatic free cholesterol is potentially available for secretion into bile.


Assuntos
Bile/metabolismo , Colesterol/metabolismo , Lipoproteínas/metabolismo , Fígado/metabolismo , Animais , Transporte Biológico , Ésteres do Colesterol/metabolismo , HDL-Colesterol/metabolismo , Cinética , Masculino , Ratos , Ratos Endogâmicos , Proteínas Recombinantes/metabolismo
14.
Biochim Biophys Acta ; 1497(1): 94-102, 2000 Jun 02.
Artigo em Inglês | MEDLINE | ID: mdl-10838163

RESUMO

A complementary DNA for the angiotensin II (AngII) type 1 (AT(1)) receptor from Mustela putorius furo (ferret) was isolated from a ferret atria cDNA library. The cDNA encodes a protein (fAT(1)) of 359 amino acids having high homologies (93-99%) to other mammalian AT(1) receptor counterparts. When fAT(1) was expressed in COS-7 cells and photoaffinity labeled with the photoactive analogue (125)I-¿Sar(1), Bpa(8)AngII, a protein of 100 kDa was detected by autoradiography. The formation of this complex was specific since it was abolished in the presence of the AT(1) non-peptidic antagonist L-158,809. Functional analysis indicated that the fAT(1) receptor efficiently coupled to phospholipase C as demonstrated by an increase in inositol phosphate production following stimulation with AngII. Binding studies revealed that the fAT(1) receptor had a high affinity for the peptide antagonist ¿Sar(1), Ile(8)AngII (K(d) of 5. 8+/-1.4 nM) but a low affinity for the AT(1) selective non-peptidic antagonist DuP 753 (K(d) of 91+/-15.6 nM). Interestingly, when we substituted Thr(163) with an Ala residue, which occupies this position in many mammalian AT(1) receptors, we restored the high affinity of this receptor for Dup 753 (11.7+/-5.13 nM). These results suggest that position 163 of the AT(1) receptor does not contribute to the overall binding of peptidic ligands but that certain non-peptidic antagonists such as Dup 753 are clearly dependent on this position for efficient binding.


Assuntos
Furões/genética , Losartan/metabolismo , Receptores de Angiotensina/genética , 1-Sarcosina-8-Isoleucina Angiotensina II/análogos & derivados , 1-Sarcosina-8-Isoleucina Angiotensina II/metabolismo , Alanina/genética , Alanina/metabolismo , Sequência de Aminoácidos , Substituição de Aminoácidos , Angiotensina II/análogos & derivados , Angiotensina II/metabolismo , Angiotensina II/farmacologia , Antagonistas de Receptores de Angiotensina , Animais , Sequência de Bases , Sítios de Ligação , Ligação Competitiva/efeitos dos fármacos , Células COS , Clonagem Molecular , DNA Complementar/química , DNA Complementar/genética , DNA Recombinante/genética , DNA Recombinante/metabolismo , Imidazóis/farmacologia , Radioisótopos do Iodo , Losartan/farmacologia , Dados de Sequência Molecular , Plasmídeos , Ligação Proteica , Piridinas/farmacologia , Receptor Tipo 1 de Angiotensina , Receptor Tipo 2 de Angiotensina , Receptores de Angiotensina/metabolismo , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Treonina/genética , Treonina/metabolismo
15.
Genetics ; 144(4): 1817-33, 1996 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-8978067

RESUMO

Different phylogenetic analyses of the same genetic data set can yield conflicting results, depending on the choice of parameter settings and included taxa. This is particularly true in studies involving data sets where levels of homoplasy are high and likely to obscure the phylogenetic signal. Filtering of this phylogenetic noise can be attempted, with varying degrees of success, by using different weighting schemes and ingroup/outgroup choices, but it can be difficult to decide objectively which approach is best. Using a cytochrome b data set from cetaceans and artiodactyls, we examined the effects of a suite of parameter settings on the outcome of phylogenetic analyses. We tested 2968 combinations among the seven parameters that most often vary among phylogenetic studies. It is our contention that this sensitivity analysis identifies portions of the multidimensional parameter space where phylogenetic signal is most reliably recovered, and simple rules are given to guide the choice of settings. Portions of this data set have been used in previous studies with conflicting results, namely the monophyly vs. paraphyly of one of the two major recognized cetacean suborders, the toothed whales. This analysis strongly supports the sister relationship between sperm whales and baleen whales.


Assuntos
Cetáceos/genética , DNA Mitocondrial/genética , Filogenia , Análise de Sequência de DNA , Animais , Grupo dos Citocromos b/genética , Técnicas Genéticas
16.
Cell Signal ; 9(5): 379-82, 1997 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-9376218

RESUMO

We recently reported that replacement of Tyr302 for Ala in the human angiotensin II type 1 receptor (hAT1) severely impaired its ability to activate phospholipase C (PLC). Another study demonstrated that the same mutation in the rat AT1 receptor only slightly impaired its ability to activate PLC. The most striking difference between the two studies was the use of LiCl in the experimental conditions. Thus, in the present report we evaluated the effect of LiCl on the rate of accumulation of inositol trisphosphate (IP3) in transfected cells stimulated with angiotension II (Ang II). In the presence of LiCl, Ang II caused a significant accumulation of IP3 in COS-7 cells transfected with the hAT1Y302A mutant receptor. In stably expressing CHO cells, stimulation of hAT1Y302A did not induce any IP3 elevation even in the presence of LiCl whereas the hAT1 wild-type receptor increased the production of IP3 exclusively in the presence of LiCl. These results show that LiCl is a convenient tool to enhance the sensitivity of PLC assays. However, in structure-activity relationship studies, it may underestimate or mask the debilitating effect of some mutations.


Assuntos
Cloreto de Lítio/farmacologia , Compostos Organotiofosforados/metabolismo , Receptores de Angiotensina/metabolismo , Fosfolipases Tipo C/metabolismo , Substituição de Aminoácidos , Angiotensina II/metabolismo , Angiotensina II/farmacologia , Animais , Células CHO , Células COS , Cricetinae , Ativação Enzimática , Inositol 1,4,5-Trifosfato/análogos & derivados , Inositol 1,4,5-Trifosfato/metabolismo , Cloreto de Lítio/metabolismo , Mutagênese Sítio-Dirigida , Receptor Tipo 1 de Angiotensina , Transfecção
17.
Mol Endocrinol ; 13(4): 578-86, 1999 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-10194764

RESUMO

To identify ligand-binding domains of Angiotensin II (AngII) type 1 receptor (AT1), two different radiolabeled photoreactive AngII analogs were prepared by replacing either the first or the last amino acid of the octapeptide by p-benzoyl-L-phenylalanine (Bpa). High yield, specific labeling of the AT1 receptor was obtained with the 125I-[Sar1,Bpa8]AngII analog. Digestion of the covalent 125I-[Sar1,Bpa8]AngII-AT1 complex with V8 protease generated two major fragments of 15.8 kDa and 17.8 kDa, as determined by SDS-PAGE. Treatment of the [Sar1,Bpa8]AngII-AT1 complex with cyanogen bromide produced a major fragment of 7.5 kDa which, upon further digestion with endoproteinase Lys-C, generated a fragment of 3.6 kDa. Since the 7.5-kDa fragment was sensitive to hydrolysis by 2-nitro-5-thiocyanobenzoic acid, we circumscribed the labeling site of 125I-[Sar1,Bpa8]AngII within amino acids 285 and 295 of the AT1 receptor. When the AT1 receptor was photolabeled with 125I-[Bpa1]AngII, a poor incorporation yield was obtained. Cleavage of the labeled receptor with endoproteinase Lys-C produced a glycopeptide of 31 kDa, which upon deglycosylation showed an apparent molecular mass of 7.5 kDa, delimiting the labeling site of 125I-[Bpa1]AngII within amino acids 147 and 199 of the AT1 receptor. CNBr digestion of the hAT1 I165M mutant receptor narrowed down the labeling site to the fragment 166-199. Taken together, these results indicate that the seventh transmembrane domain of the AT1 receptor interacts strongly with the C-terminal amino acid of [Sar1, Bpa8]AngII interacts with the second extracellular loop of the AT1 receptor.


Assuntos
Angiotensina II/análogos & derivados , Fenilalanina/análogos & derivados , Marcadores de Fotoafinidade/química , Receptores de Angiotensina/metabolismo , Angiotensina II/química , Animais , Sítios de Ligação , Ligação Competitiva , Células COS/metabolismo , Células Cultivadas/metabolismo , Humanos , Radioisótopos do Iodo , Fenilalanina/química , Receptor Tipo 1 de Angiotensina , Receptor Tipo 2 de Angiotensina , Receptores de Angiotensina/genética , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Sarcosina/química
18.
Conserv Physiol ; 3(1): cou062, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-27293683

RESUMO

Climate change is compounding the threats to the future of biodiversity, already impacted by habitat loss, invasive species and diseases. In the Hawaiian Islands, many of the endemic species have narrow habitat ranges that make them especially vulnerable to climate change. The Hawaiian Drosophila, a remarkably diverse group of species with 11 listed as federally endangered, are thought to be sensitive to temperature changes. To examine the species differences in sensitivity of Hawaiian picture-wing Drosophila to temperature changes, wild populations of Drosophila sproati, a relatively common species, and Drosophila silvestris, a rare species, were collected from two locations on Hawaii Island and bred in common laboratory conditions. Adult flies were exposed to hot and cold temperatures and compared with adult flies at control temperatures. Drosophila silvestris adults were less tolerant to heat stress than D. sproati for both survival and sperm mobility. In contrast, D. silvestris adults were more tolerant to cold stress than D. sproati for adult survival. The expression of 4950 Gene Ontology annotated gene transcripts was also analysed in high-temperature-treated and control males to identify candidate genes related to heat tolerance. There were more than twice as many transcripts differentially expressed after high temperature treatment for D. silvestris (246 transcripts) as for D. sproati (106 transcripts), with 13 Gene Ontology terms enriched between temperatures for D. silvestris and merely three in D. sproati. The combined results are consistent with D. sproati occurring more widely today as well as occurring at lower elevations than D. silvestris and with a genetically based temperature response, which is more severe in D. silvestris at high temperatures than that in D. sproati. These experiments demonstrate the potential for different capacities of species to adapt to future climate change conditions as well as providing an explanation for historical changes in the distribution of species.

19.
Oncogene ; 34(39): 5080-94, 2015 Sep 24.
Artigo em Inglês | MEDLINE | ID: mdl-25597409

RESUMO

Multiform glioblastomas (GBM) are the most frequent and aggressive primary brain tumors in adults. The poor prognosis is due to neo-angiogenesis and cellular invasion, processes that require complex chemotaxic mechanisms involving motility, migration and adhesion. Understanding these different cellular events implies identifying receptors and transduction pathways that lead to and promote either migration or adhesion. Here we establish that glioma express the vasoactive peptide urotensin II (UII) and its receptor UT and that UT-mediated signaling cascades are involved in glioma cell migration and adhesion. Components of the urotensinergic systems, UII and UT, are widely expressed in patient-derived GBM tissue sections, glioma cell lines and fresh biopsy explants. Interestingly, gradient concentrations of UII produced chemoattracting migratory/motility effects in glioma as well as HEK293 cells expressing human UT. These effects mainly involved the G13/Rho/rho kinase pathway while partially requiring Gi/o/PI3K components. In contrast, we observed that homogeneous concentrations of UII drastically blocked cell motility and stimulated cell-matrix adhesions through a UT/Gi/o signaling cascade, partially involving phosphatidylinositol-3 kinase. Finally, we provide evidence that, in glioma cells, homogeneous concentration of UII allowed translocation of Gα13 to the UT receptor at the plasma membrane and increased actin stress fibers, lamellipodia formation and vinculin-stained focal adhesions. UII also provoked a re-localization of UT precoupled to Gαi in filipodia and initiated integrin-stained focal points. Altogether, these findings suggest that UT behaves as a chemotaxic receptor, relaying a signaling switch between directional migration and cell adhesion under gradient or homogeneous concentrations, thereby redefining sequential mechanisms affecting tumor cells during glioma invasion. Taken together, our results allow us to propose a model in order to improve the design of compounds that demonstrate signaling bias for therapies that target specifically the Gi/o signaling pathway.


Assuntos
Neoplasias Encefálicas/metabolismo , Quimiotaxia , Glioblastoma/metabolismo , Receptores Acoplados a Proteínas G/metabolismo , Transdução de Sinais , Urotensinas/metabolismo , Actinas/metabolismo , Biópsia , Neoplasias Encefálicas/patologia , Glioblastoma/patologia , Humanos , Polimerização
20.
Endocrinology ; 138(9): 3828-35, 1997 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-9275071

RESUMO

Angiotensin II (Ang II) regulates aldosterone production in bovine adrenal glomerulosa cells by interacting with the AT1 receptor. This receptor is coupled to a G protein that controls the activity of phospholipase C. With a primary culture of bovine adrenal glomerulosa cells, we evaluated the desensitization of cellular responses after pretreatment with Ang II. When cells were pretreated for 30 min with 1 microM Ang II at 37 C, we observed a 48% loss of [125I]Ang II-binding activity. Scatchard analysis revealed that this decreased binding activity corresponded to a 53% loss of the total number of binding sites. This phenomenon was time dependent, with a t(1/2) of 20 min, and a maximal loss of 76% of the total binding sites was observed after 14 h. A time-dependent decrease in AT1 receptor messenger RNA levels was also observed after pretreatment with 1 microM Ang II for 12-24 h. Taken together, these results are interpreted as a down-regulation of the AT1 receptor. Desensitization of phospholipase C activity under similar conditions was, however, a slower process, with a t(1/2) of 9 h and a maximal response reduction of 83% observed after 24 h. Dose-response experiments indicated that maximal phospholipase C desensitization was obtained in the presence of 1 microM Ang II, with an EC50 of 90 nM. The desensitization was of a homologous nature, as a 24-h pretreatment with Ang II did not affect bradykinin-induced inositol phosphate production. A 24-h pretreatment with 1 microM Ang II also significantly desensitized the steroidogenic effect of Ang II and the potentiating effect of Ang II on ACTH-induced cAMP production. Lower concentrations of Ang II (10 nM) did not produce any desensitizing effect on these two parameters. This study provides evidence that glomerulosa cells are functionally resistant to short term desensitization of the AT1 receptor and that long term down-regulation with high concentrations of Ang II is needed to desensitize AT1-mediated cellular responses.


Assuntos
Angiotensina II/farmacologia , Regulação para Baixo , Receptores de Angiotensina/efeitos dos fármacos , Receptores de Angiotensina/fisiologia , Zona Glomerulosa/metabolismo , Hormônio Adrenocorticotrópico/farmacologia , Aldosterona/biossíntese , Angiotensina II/administração & dosagem , Angiotensina II/metabolismo , Animais , Bradicinina/farmacologia , Bovinos , AMP Cíclico/biossíntese , Tolerância a Medicamentos , Fosfatos de Inositol/biossíntese , Cinética , RNA Mensageiro/metabolismo , Receptor Tipo 1 de Angiotensina , Receptor Tipo 2 de Angiotensina , Receptores de Angiotensina/genética , Zona Glomerulosa/efeitos dos fármacos
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