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1.
World J Microbiol Biotechnol ; 38(11): 206, 2022 Aug 26.
Artigo em Inglês | MEDLINE | ID: mdl-36008736

RESUMO

Rhizobia are a diazotrophic group of bacteria that are usually isolated form the nodules in roots, stem of leguminous plants and are able to form nodules in the host plant owing to the presence of symbiotic genes. The rhizobial community is highly diverse, and therefore, the taxonomy and genera-wise classification of rhizobia has been constantly changing since the last three decades. This is mainly due to technical advancements, and shifts in definitions, resulting in a changing paradigm of rhizobia taxonomy. Initially, the taxonomic definitions at the species and sub species level were based on phylogenetic analysis of 16S rRNA sequence, followed by polyphasic approach to have phenotypic, biochemical, and genetic analysis including multilocus sequence analysis. Rhizobia mainly belonging to α- and ß-proteobacteria, and recently new additions from γ-proteobacteria had been classified. Nowadays rhizobial taxonomy has been replaced by genome-based taxonomy that allows gaining more insights of genomic characteristics. These omics-technologies provide genome specific information that considers nodulation and symbiotic genes, along with molecular markers as taxonomic traits. Taxonomy based on complete genome sequence (genotaxonomy), average nucleotide identity, is now being considered as primary approach, resulting in an ongoing paradigm shift in rhizobial taxonomy. Also, pairwise whole-genome comparisons, phylogenomic analyses offer correlations between DNA and DNA re-association values that have delineated biologically important species. This review elaborates the present classification and taxonomy of rhizobia, vis-a-vis development of technical advancements, parameters and controversies associated with it, and describe the updated information on evolutionary lineages of rhizobia.


Assuntos
Fabaceae , Rhizobium , DNA Bacteriano/genética , Fabaceae/microbiologia , Filogenia , RNA Ribossômico 16S/genética , Rhizobium/genética , Análise de Sequência de DNA , Simbiose/genética
2.
Arch Microbiol ; 203(6): 3715-3726, 2021 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-33914091

RESUMO

A study was conducted to determine the suitability of the endophytes as probable next-generation biofertilizers and novel biostimulants. Enterobacter turicensis RCT5 and Stenotrophomonas maltophilia RCT31 showed a zone of solubilization, of phosphate, potassium, silicate, and zinc, produced phytase. Among the three media used for phosphate solubilization, the rhizospheric medium turned out to be the best-producing results in less than 24 h, while others took a longer time to give the same results. The strains exhibited differential ability to produce organic acids in the plate assay and eight of these were profuse producers of exopolysaccharides. We were able to partially elucidate the mechanism of solubilization of insoluble salts that included organic acids and protein activity in the cell-free culture filtrates of endophytes. All the root nodule endophytes showed potential as novel biostimulants and next-generation biofertilizers as found in the germination assay of tomato, a non-host crop using different methodologies. It proved that the endophytes have different mechanism of expressions of their plant growth-promoting traits as well as can promote the growth of tomato plant irrespective of the method used.


Assuntos
Endófitos/crescimento & desenvolvimento , Fertilizantes , Reguladores de Crescimento de Plantas , Raízes de Plantas/microbiologia , Solanum lycopersicum/crescimento & desenvolvimento , Solanum lycopersicum/microbiologia , Documentação , Solanum lycopersicum/metabolismo , Fosfatos/metabolismo
3.
Arch Microbiol ; 203(5): 2689-2698, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-33715029

RESUMO

A phytohormone producing, N2-fixing and 1-aminocyclopropane-1-carboxylate (ACC) deaminase synthesizing bacterium Ensifer adhaerens KS23 effectively increased the yield and nutritional contents of Pisum sativum var. Arkel. The isolate KS23 showed positive ACC deaminase activity with 174.2 (nmol of α-ketobutyrate/g-1 biomass½ h-1) a 9.7-fold increase in glutathione S-transferase activity. The proximate analysis exhibited an increased yield of protein (21.45%), carbohydrate (38.90%), sulphur (29.94%) starch (27.52%), total ash (35.57%), fat content (27.5%), nitrogen (24.06%) and hydrogen (17.91%) in treated seeds of P. sativum as compared to untreated crop seeds in field trials at Srikot village, Srinagar-246,174 (Garhwal) India. The most desirable essential and non-essential amino-acids content was also enhanced simultaneously by E. adhaerens KS23 as compared to non-treated crop seeds. This study revealed the enhancement of various nutritional contents resulting in quality improvement and an increase in growth productivity of pea. This study provides an encouraging result that may benefit the marginal income of farmers belonging mainly to hilly regions who are dependent on traditional methods of farming and thus improving their economy.


Assuntos
Carbono-Carbono Liases/metabolismo , Pisum sativum/crescimento & desenvolvimento , Pisum sativum/microbiologia , Rhizobiaceae/metabolismo , Sementes/crescimento & desenvolvimento , Agricultura , Altitude , Índia , Nitrogênio/metabolismo , Reguladores de Crescimento de Plantas/metabolismo , Rhizobiaceae/isolamento & purificação
4.
Arch Microbiol ; 202(9): 2461-2470, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32607724

RESUMO

The present study was aimed to study the effect of bacteria inhabiting in buffalo dung on nutritional properties of soil and plant. Three beneficial bacteria Proteus mirabilis, Pseudomonas aeruginosa, and Enterobacter xiangfangensis were isolated from buffalo dung to evaluate for their effects individually as well as in consortium. The combined effect of P. mirabilis and P. aeruginosa showed a significant enhancement in different biological parameters of Foeniculum vulgare such as primary branch (99.32%), secondary branch (98.32%), number of umbels (87.62%), number of umbellets (99.85%), number of seeds (104.94%), grain yield (62.38%), biological yield (35.99%), and harvest index (19.48%). Consortium of these potent bacteria also enhanced proximate constituents such as total ash (49.79%), ether extract (63.06%), crude fibre (48.91%), moisture content (33.40%), dry matter (31.45%), acid insoluble ash (33.20%), and crude protein (40.73%). A highly significant correlation (p ≤ 0.01) was found between nitrogen (r = 0.97), phosphorous (r = 0.95), and potassium (r = 0.97) contents of soil. This research enhances the knowledge of the effect of plant growth-promoting bacteria on nutrient properties of soil and fennel which deliver a new index for healthier use in organic agricultural practices.


Assuntos
Fenômenos Fisiológicos Bacterianos , Fezes/microbiologia , Foeniculum/microbiologia , Microbiologia do Solo , Animais , Búfalos , Nitrogênio/análise , Nitrogênio/metabolismo , Nutrientes/análise , Nutrientes/metabolismo , Desenvolvimento Vegetal , Potássio/análise , Potássio/metabolismo , Sementes/química , Solo/química
5.
Arch Microbiol ; 202(5): 1049-1058, 2020 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-32008053

RESUMO

Part of the native root nodule endophytic microflora referring to members of the genera Proteobacteria and Sphingobacteria were used to test their bioefficacy as seed biopriming. These were quantified for their plant growth promoting (PGP) attributes such as IAA production, P and K-solubilization and ACC deaminase production. Results showed that significantly highest IAA was produced by E. hormaechi RCT10. The highest P-solubilization was observed with S. maltophila RCT31 it was solubilizing all the substrate tri-calcium phosphate, di-calcium phosphate, and zinc phosphate. Significantly highest K-solubilization was observed with S. maltophila RCT31 followed by E. turicensis RCT5. However, the maximum zinc solubilization was reported with S. maltophila RCT31 followed by E. turicensis RCT5. The maximum ACC deaminase was quantified in the bacterium. Results revealed that the E. hormaechi RCT10 utilized seed leechates most effectively while root exudates were maximally utilized by S. maltophila RCT31. The pots experiment proves that S. maltophila RCT31 was the most effective bacterium and it was replication vis-à-vis field experiment. In particular, S. maltophila RCT31 holds strong potential to be possibly used as a bioformulation for the medicinal legume, as an economical and eco-friendly alternative to agrochemicals.


Assuntos
Carbono-Carbono Liases/biossíntese , Clitoria/crescimento & desenvolvimento , Clitoria/microbiologia , Proteobactérias/metabolismo , Sphingobacterium/metabolismo , Fabaceae/microbiologia , Desenvolvimento Vegetal/fisiologia , Raízes de Plantas/metabolismo , Raízes de Plantas/microbiologia , Sementes/metabolismo , Sementes/microbiologia , Sphingobacterium/fisiologia
6.
Arch Microbiol ; 202(4): 665-676, 2020 May.
Artigo em Inglês | MEDLINE | ID: mdl-31781809

RESUMO

Plant beneficial rhizobacteria (PBR) is a group of naturally occurring rhizospheric microbes that enhance nutrient availability and induce biotic and abiotic stress tolerance through a wide array of mechanisms to enhance agricultural sustainability. Application of PBR has the potential to reduce worldwide requirement of agricultural chemicals and improve agro-ecological sustainability. The PBR exert their beneficial effects in three major ways; (1) fix atmospheric nitrogen and synthesize specific compounds to promote plant growth, (2) solubilize essential mineral nutrients in soils for plant uptake, and (3) produce antimicrobial substances and induce systemic resistance in host plants to protect them from biotic and abiotic stresses. Application of PBR as suitable inoculants appears to be a viable alternative technology to synthetic fertilizers and pesticides. Furthermore, PBR enhance nutrient and water use efficiency, influence dynamics of mineral recycling, and tolerance of plants to other environmental stresses by improving health of soils. This report provides comprehensive reviews and discusses beneficial effects of PBR on plant and soil health. Considering their multitude of functions to improve plant and soil health, we propose to call the plant growth-promoting bacteria (PGPR) as PBR.


Assuntos
Agricultura/tendências , Fenômenos Fisiológicos Bacterianos , Plantas/microbiologia , Microbiologia do Solo , Bactérias/metabolismo , Nitrogênio/metabolismo , Desenvolvimento Vegetal , Solo/química , Estresse Fisiológico
7.
Can J Microbiol ; 66(11): 670-677, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32640165

RESUMO

Nonrhizobial root nodule endophytic bacteria are known to have beneficial effects on host plants and are also considered contaminants or opportunists. They grow either individually or as a co-occupant of the root nodules of legumes. In this study, a nonrhizobial endophytic bacterial strain was isolated from the root nodules of the medicinal legume Mucuna utilis var. capitata L.; phenotypic, genotypic, and agricultural characterization was performed using a HiMedia kit and 16S rRNA sequencing. This strain showed tremendous seedling growth potential (30%), compared with the control, as well as a strong antagonistic nature against the plant pathogenic fungus Fusarium udum when plant growth parameters were analyzed. The strain, identified by 16S rRNA as Stenotrophomonas maltophilia, showed a multitude of plant-growth-promoting attributes both direct (IAA, phosphate solubilization) and indirect (ACC deaminase, siderophore) and enhanced the growth of host plant in field trials. This is the first report of the plant-growth-promoting potential of this endophytic bacterium from the nodules of M. utilis var. capitata L.; hence, it has potential for use in various biotechnological applications in various industries.


Assuntos
Endófitos/fisiologia , Mucuna/crescimento & desenvolvimento , Mucuna/microbiologia , Nódulos Radiculares de Plantas/microbiologia , Stenotrophomonas maltophilia/fisiologia , Antibiose , Carbono-Carbono Liases/metabolismo , Endófitos/classificação , Endófitos/genética , Endófitos/isolamento & purificação , Ácidos Indolacéticos/metabolismo , Fosfatos/metabolismo , RNA Ribossômico 16S/genética , Sideróforos/metabolismo , Stenotrophomonas maltophilia/classificação , Stenotrophomonas maltophilia/genética , Stenotrophomonas maltophilia/isolamento & purificação
8.
Can J Microbiol ; 66(2): 111-124, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31671281

RESUMO

This study emphasizes the beneficial role of rhizo-competitive Bacillus spp. isolated from rhizospheric and non-rhizospheric soil in plant growth promotion and yield improvement via nitrogen fixation and biocontrol of Sclerotium rolfsii causing foot rot disease in Eleusine coracana (Ragi). The selection of potent rhizobacteria was based on plant-growth-promoting attributes using Venn set diagram and Bonitur scale. Bacillus pumilus MSTA8 and Bacillus amyloliquefaciens MSTD26 were selected because they were effective in root colonization, rhizosphere competence, and biofilm formation using root exudates of E. coracana L. rich with carbohydrates, proteins, and amino acids. The relative chemotaxis index of the isolates expressed the invasive behavior of the rhizosphere. During pot and field trials, the consortium of the rhizobacteria in a vermiculite carrier increased the grain yield by 37.87%, with a significant harvest index of 16.45. Soil analysis after the field trial revealed soil reclamation potentials to manage soil nutrition and fertility. Both indexes ensured crop protection and production in eco-safe ways and herald commercialization of Bacillus bio-inoculant for improvement in crop production and disease management of E. coracana.


Assuntos
Bacillus/fisiologia , Basidiomycota/fisiologia , Eleusine/microbiologia , Doenças das Plantas/prevenção & controle , Exsudatos de Plantas/análise , Microbiologia do Solo , Bacillus amyloliquefaciens/fisiologia , Bacillus pumilus/fisiologia , Quimiotaxia , Eleusine/crescimento & desenvolvimento , Fixação de Nitrogênio , Filogenia , Doenças das Plantas/microbiologia , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/microbiologia , Rizosfera
9.
Can J Microbiol ; 65(5): 377-386, 2019 May.
Artigo em Inglês | MEDLINE | ID: mdl-30657697

RESUMO

This study aimed to harness the benefits of sulfur-oxidizing beneficial bacteria from buffalo dung to improve crop yields of Foeniculum vulgare. A total of 61 bacterial isolates were screened from buffalo dung, of which 40 isolates exhibited plant-growth-promoting attributes, such as phosphate solubilization, indole-3-acetic acid production, and hydrogen cyanide production. Of these 40, four bacterial isolates, viz., BUFF12, BUFF14, BUFF23, and BUFF38, were the most potent, having plant-growth-promoting and sulfur-oxidizing properties. These four isolates produced phytase by solubilizing calcium phytate and sodium phytate. They solubilized potassium besides oxidizing the sulfur, causing an increase in soil fertility and crop production. All four isolates were nonpathogenic in nature, as demonstrated by a negative haemolysis test. According to the 16S rRNA gene sequence, the isolate BUFF14 was identified as Proteus mirabilis. Proteus mirabilis BUFF14 maximized seed germination with enhanced vegetative and reproductive parameters during pot and field trial studies, compared with the other isolates.


Assuntos
Bactérias/metabolismo , Búfalos , Fezes/microbiologia , Foeniculum/crescimento & desenvolvimento , Microbiologia do Solo , Animais , Bactérias/genética , Ácidos Indolacéticos/metabolismo , Fosfatos , Desenvolvimento Vegetal , Proteus mirabilis/isolamento & purificação , Proteus mirabilis/metabolismo , RNA Ribossômico 16S/genética , Solo , Enxofre/metabolismo
10.
Curr Microbiol ; 74(2): 184-192, 2017 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-27913879

RESUMO

Curcumin (diferuloyl methane) is the main bioactive component of turmeric (Curcuma longa L.) having remarkable multipotent medicinal and therapeutic applications. Two Bacilli isolated from termitarium soil and identified as Bacillus endophyticus TSH42 and Bacillus cereus TSH77 were used for bacterization of rhizome for raising C. longa ver. suguna for growth and enhancement. Both the strains showed remarkable PGP activities and also chemotactic in nature with high chemotactic index. Turmeric plants bacterized with strains B. endophyticus TSH42 and B. cereus TSH77 individually and in combination increased plant growth and turmeric production up to 18% in field trial in comparison to non-bacterized plants. High-performance liquid chromatography analysis was performed to determine the content of curcumin, which showed concentration of curcumin in un-inoculated turmeric as 3.66 g which increased by 13.6% (4.16 g) when combination of TSH42 and TSH77 was used.


Assuntos
Bacillus/crescimento & desenvolvimento , Bacillus/metabolismo , Curcuma/crescimento & desenvolvimento , Curcuma/metabolismo , Curcumina/análise , Bacillus/classificação , Bacillus/isolamento & purificação , Cromatografia Líquida de Alta Pressão , Curcuma/química , Curcuma/microbiologia , Microbiologia do Solo
11.
Acta Biol Hung ; 68(2): 208-219, 2017 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-28605978

RESUMO

In a multivalent approach to discover new antimicrobial substance, a total of 160 Bacilli were isolated from termitarium soil, characterized on the basis of their morphological and physiological characters and screened for their antimicrobial activity by agar well diffusion method against certain drug resistant pathogenic bacteria such as Staphylococcus aureus, Methicillin resistant Staphylococcus aureus and common food contaminating bacteria Listeria monocytogenes. After preliminary screening, sixteen isolates showed inhibitory activity against test pathogens. Among them Bacillus isolate TSH58 exhibited maximum inhibitory activity against MRSA, Staphylococcus aureus and Listeria monocytogenes. Based on morphological, physiological, biochemical and 16S rDNA characteristics isolate TSH58 was identified as a member of the Bacillus cereus species group. Various nutrient sources and culture conditions were optimized, the partially purified antimicrobial metabolite was subjected to various treatments such as heat, pH and proteolytic enzymes. Complete loss in the activity observed when the crude metabolite was treated with proteolytic enzymes suggesting its proteinaceous nature and termed as bacteriocin like inhibitory substance (BLIS). Minimal inhibitory concentration of the partially purified bacteriocin determined by microtiter plate assay was 80 µg/ml for MRSA and 40 µg/ml for L. monocytogenes. Tricine SDS PAGE analysis revealed that the partially purified bacteriocin produced by the Bacillus strain TSH58 had an apparent molecular weight of about 4.0 KDa.


Assuntos
Bacillus cereus , Bacteriocinas , Staphylococcus aureus Resistente à Meticilina/crescimento & desenvolvimento , Bacillus cereus/classificação , Bacillus cereus/genética , Bacillus cereus/isolamento & purificação , Bacillus cereus/metabolismo , Bacteriocinas/biossíntese , Bacteriocinas/genética , DNA Bacteriano/genética , DNA Ribossômico/genética , Listeria monocytogenes/crescimento & desenvolvimento , RNA Ribossômico 16S/genética
12.
Can J Microbiol ; 62(10): 880-892, 2016 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-27604298

RESUMO

Bacillus strains were isolated from termitarium soil and screened for their antifungal activity through the production of diffusible and volatile metabolites. Further, the bacterial strains that showed antifungal activity were evaluated for their biocontrol potential on the basis of their plant-growth-promoting attributes. Termitarium-inhabiting Bacillus strains TSH42 and TSH77 significantly reduced the growth of pathogenic fungus Fusarium solani, controlled the symptoms of rhizome rot in turmeric (Curcuma longa L.), and demonstrated various plant-growth-promoting traits in different in vitro assays. On the basis of morphological, physiological, biochemical, and 16S rDNA characteristics, isolates TSH42 and TSH77 were identified as Bacillus endophyticus (KT379993) and Bacillus cereus (KT379994), respectively. Through liquid chromatography - mass spectrometry analysis, acidified cell-free culture filtrate (CFCF) of B. cereus TSH77 was shown to contain surfactin and fengycin, while CFCF of B. endophyticus TSH42 contained iturin in addition to surfactin and fengycin. Treatment of the turmeric (C. longa L.) plants with TSH42 and TSH77 significantly reduced the percentage incidence of rhizome rot disease caused by F. solani. The same treatment also increased the fresh rhizome biomass and plant growth in greenhouse conditions.


Assuntos
Bacillus/fisiologia , Curcuma/microbiologia , Rizoma/microbiologia , Antibiose , Antifúngicos/metabolismo , Antifúngicos/farmacologia , Bacillus/isolamento & purificação , Proteínas de Bactérias/biossíntese , Proteínas de Bactérias/química , Curcuma/crescimento & desenvolvimento , Fusarium/efeitos dos fármacos , Fusarium/fisiologia , Viabilidade Microbiana , Doenças das Plantas/microbiologia , Rizoma/crescimento & desenvolvimento , Sideróforos/biossíntese , Microbiologia do Solo
13.
Can J Microbiol ; 61(2): 131-42, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-25619106

RESUMO

In this study, bacteria (8 species and 5 genera) belonging to the classes Betaproteobacteria, Gammaproteobacteria, and Sphingobacteria were isolated from root nodules of the multipurpose legume Clitoria ternatea L. and identified on the basis of partial 16S rRNA sequencing. The root nodule bacteria were subjected to phenotypic clustering and diversity studies using biochemical kits, including Hi-Media Carbokit™, Enterobacteriaceae™ identification kit, ERIC-PCR, and 16S ARDRA. All the strains showed growth on Ashby's N-free media over 7 generations, indicative of presumptive nitrogen fixation and further confirmed by amplification of the nifH gene. None of the strains showed the capability to renodulate the host plant, neither alone nor in combination with standard rhizobial strains, which was further confirmed by the absence of nodC bands in PCR assay. The results clearly indicate the common existence of nonrhizobial microflora inside the root nodules of legumes, which were thought to be colonized only by rhizobia and were responsible for N2 fixation in leguminous crops. However, with the recent discovery of nodule endophytes from a variety of legumes, as also observed here, it can be assumed that symbiotic rhizobia are not all alone and that these invasive endophytes belonging to various bacterial genera are more than just opportunistic colonizers of specialized nodule niche.


Assuntos
Clitoria/microbiologia , Endófitos/isolamento & purificação , Rhizobium/genética , Nódulos Radiculares de Plantas/microbiologia , Simbiose , Bactérias/genética , Betaproteobacteria/genética , Análise por Conglomerados , Gammaproteobacteria/genética , Fixação de Nitrogênio , Fenótipo , Filogenia , Reação em Cadeia da Polimerase , RNA Ribossômico 16S/genética , Especificidade da Espécie
14.
Artigo em Inglês | MEDLINE | ID: mdl-37861013

RESUMO

BACKGROUND: After a period of prolonged indifference, where synthetic drugs were preferred, interest in the biological aspects and bioactive ingredients of plants accountable for therapeutic potential has been explored eminently. Sida cordifolia L. is a perennial herb that has been widely utilized in Indian (Ayurveda, Unani, and Siddha), American, and Chinese folk medicine and herbalism practice for curing a wide range of ailments in human beings. OBJECTIVE: The goal of this review is to elucidate indigenous knowledge parallelly with the pharmacotherapeutics potential of Sida cordifolia L. against various diseases. It is also intended to display pertinent information related to nanoparticle profiling. METHODS: In the current comprehensive study, web-based searches were performed by using several databases, such as Google Scholar, PubMed, ResearchGate, Science Direct, and Scopus, to figure out relevant research work and data published in academic journals from 1930 to July, 2023 using single or combination of keywords listed herewith. RESULTS: More than 50 chemical constituents, including quinazoline and phenethylamine alkaloids, flavones, flavonol, phytosterol, fatty acids, etc., were reported to be found in different parts of healthy plants. Apart from traditional claims and pharmacological aspects, several marketed herbal formulations and granted patents were also described. CONCLUSION: Several in-vitro and in-vivo studies validated the usage of S. cordifolia as antiinflammatory, antibacterial, antifungal, antiprotozoal, anthelmintic, anticancer, antiulcer, cardioprotective, hypoglycemic, etc. agent. Few patents are also related to S. cordifolia, and more research work needs to be carried out for its potential granted to use as an antiviral agent and other new drug discovery molecules.

15.
Front Microbiol ; 14: 1105849, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-36970695

RESUMO

Plant diseases are one of the main hurdles for successful crop production and sustainable agriculture development world-wide. Though several chemical measures are available to manage crop diseases, many of them have serious side effects on humans, animals and the environment. Therefore, the use of such chemicals must be limited by using effective and eco-friendly alternatives. In view of the same, we found a Bacillus subtilis BS-58 as a good antagonist towards the two most devastating phytopathogens, i.e., Fusarium oxysporum and Rhizoctonia solani. Both the pathogens attack several agricultural crops (including amaranth) and induce a variety of infections in them. The findings of scanning electron microscopy (SEM) in this study suggested that B. subtilis BS-58 could inhibit the growth of both the pathogenic fungi by various means such as perforation, cell wall lysis, and cytoplasmic disintegration in the fungal hyphae. Thin-layer chromatography, LC-MS and FT-IR data revealed the antifungal metabolite to be macrolactin A with a molecular weight of 402 Da. Presence of the mln gene in the bacterial genome further endorsed that the antifungal metabolite produced by BS-58 was macrolactin A. Pot trial conducted in the present study showed that seed treatment by BS-58 effectively reduced seedling mortality (54.00 and 43.76%) in amaranth, when grown in pathogen infested soil (F. oxysporum and R. solani, respectively), when compared to their respective negative controls. Data also revealed that the disease suppression ability of BS-58 was almost equivalent to the recommended fungicide, carbendazim. SEM analysis of roots of the seedlings recovered from pathogenic attack substantiated the hyphal disintegration by BS-58 and prevention of amaranth crop. The findings of this study conclude that macrolactin A produced by B. subtilis BS-58 is responsible for the inhibition of both the phytopathogens and the suppression of the diseases caused by them. Being native and target specific, such strains under suitable conditions, may result in ample production of antibiotic and better suppression of the disease.

16.
J Biomol Struct Dyn ; 40(2): 764-779, 2022 02.
Artigo em Inglês | MEDLINE | ID: mdl-32924811

RESUMO

To comprehend the molecular mechanism of zinc transportation by bacteria tends to be a very complicated and time-consuming method. To date, fragmented and scanty studies are available about the mechanism of zinc transportation at molecular level. So, the present study scrutinizes in silico pathways of zinc fractions transportation, specifically in Bacillus spp. stimulating dynamic performance of zinc. For this, the constructed model reveals Zur to be the prime regulatory transport protein maintaining bacterial survivability at fluctuation in zinc concentrations, thereby attaining zinc homeostasis. Topology for hub nodes displays appropriate evidence of the molecular basis of bacterial zinc imports and exports. Further, the molecular docking reveals interaction of Zur protein with the zinc ligands (ZnCO3 and ZnSO4). By validation of binding affinity, binding energy and docking score via Autodock Vina and X-Score, the ZnSO4 compound was found to possess excellent stability in the active pocket site of Zur, stating Zur-ZnSO4 complex to be the most potential. Owing to which, the Zur-ZnSO4 complex was selected and subjected to molecular dynamics simulation, revealing RMSD, RG, RMSF, SASA and interaction energy for 20 ns trajectory period. Henceforth,the study provides novel insight into revealing the unrecognized Zur protein pathway, assisting zinc transportation, besides retaining best interaction with ZnSO4 ligand. This is the first system biology where molecular docking and molecular dynamics simulation-based investigation decipher the role of Zur transport protein system and interaction of its amino acids with zinc ligands in a simpler and economical form via in silico techniques.Communicated by Ramaswamy H. Sarma.


Assuntos
Bacillus , Zinco , Bacillus/metabolismo , Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular , Fatores de Transcrição , Zinco/metabolismo
17.
3 Biotech ; 12(9): 234, 2022 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-35996675

RESUMO

Chemical fertilizers impart deleterious effects on crop productivity and its nutrients which is a serious concern among agriculturist. Current research focuses on the commercial preparation of an eco-friendly and cost-effective bioformulation using buffalo dung slurry and beneficial plant growth-promoting (PGP) and biofilm forming strains. 40 strains were isolated from buffalo dung showing PGP activities. Among them, 03 strains were further selected to sequence by 16S rRNA technology and identified as Pseudomonas aeruginosa BUFF12, Proteus mirabilis BUFF14, Enterobacter xiangfangensis BUFF38. The strains were used for consortium preparation on the basis of increase in PGP activity. The consortium of strains increases in vitro PGP attributes at different percentage, i.e., 22% increase in IAA production, 10% increase in siderophore production, 5% increase in P- solubilization, 8% increase in K- solubilization, and 11% increase in S-oxidation. Three carrier materials, i.e., molasses of sugarcane, rice gruel, and buffalo dung slurry, were chosen to conduct the study. Among them, dung slurry proved to be an effective supportive material on the basis of their physico-chemical analysis and viability of strains for long-term storage. It maintained the population mixture of strains (9.4 × 108 cfu/ml) for 120 DAI followed by molasses (9.1 × 108 cfu/ml) and rice gruel (7.9 × 108 cfu/ml). These beneficial strains were further applied in field for crop productivity and slurry-based formulation with mixture of strains exhibited incredible plant growth after definite interval of time. Chemotactic activity proved these strains as strong root colonizers which was confirmed by Field Emission Scanning Electron Microscopy (FE-SEM). This research disseminates a successful technology to develop an eco-friendly bioformulation of buffalo dung slurry augmenting the crop growth in an eco-friendly manner leading to sustainable agriculture.

18.
Plants (Basel) ; 11(22)2022 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-36432852

RESUMO

Here we examine the effects of different carrier based bioinoculants on the growth, yield and nutritional value of chickpea and on associated soil nutrients. A consortium of two taxonomically distinct endophytic bacteria-Ensifer adhaerens MSN12 and Bacillus cereus MEN8-have promising plant growth promoting (PGP) attributes. We demonstrate their delivery from the laboratory to the field via the formulation of an effective bioinoculant with economic and accessible carriers. Sugarcane straw ash (SCSA) was found to be an efficient carrier and bioformulation for enhancing viability and shelf-life of strains up to 12 months. A bioformulation containing an SCSA-based consortium (MSN12 + MEN8) increased seed germination by 7%, plant weight by 29%, length by 17%, seed-yield by 12%, harvesting index by 14% and proximate nutritional constituents by 20% over consortium treatment without SCSA. In addition, the bioformulation of post-harvest treated soil improved the physico-chemical properties of the soil in comparison to a pre-sowing SCSA-based bioformulation treated crop, being fortified in different proximate nutritional constituents including dry matter (30%), crude protein (45%), crude fiber (35%), and ether extract (40%) in comparison to the control. Principal component analysis and scattered matrix plots showed a positive correlation among the treatments, which also validates improvement in the soil nutrient components and proximate constituents by T6 treatment (MSN12 + MEN8 + SCSA). The above results suggest efficiency of SCSA not only as a carrier material but also to support microbial growth for adequate delivery of lab strains as a substitute for chemi-fertilizers.

19.
Front Plant Sci ; 11: 1147, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32849705

RESUMO

The present study aimed to scrutinize the effect of different cow dung bacterial treatments on the nutritional value of Capsicum annuum L. Among all treatments, seeds inoculated with Bacillus megaterium (CDK25) showed significant enhancement in various proximate constituents viz., crude fiber (3.31%), crude protein (3.84%), and ash (2.53%) as compared to control. Likewise, significant increase in different nutrient contents viz., Ca (16.26 mg/100 g), Mg (17.37 mg/100 g), P (11.91 mg/100 g), K (0.47 mg/100 g), Fe (1.37 mg/100 g), and Zn (0.21 mg/100 g) was recorded over the control. Principal component analysis data depicts a positive correlation between different treatments with variables, validating enhancement in nutritional constituents by B. megaterium (CDK25) treatment. The study suggests the application of "B. megaterium" for achieving the persistent potential for augmenting and boosting up plant biological, functional, and nutritional assets, thereby enhancing the overall edible quality of C. annuum L. along with weathering of soil minerals.

20.
3 Biotech ; 10(2): 36, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31988830

RESUMO

The present study was designed to isolate an array of zinc solubilizing bacteria (ZSB) and to characterize them for plant growth promotion (PGP) attributes with respect to Capsicum annuum L. For this purpose, seventy bacteria were procured from cow dung and screened for zinc solubilization (ZnO and ZnCO3). Where, isolate CDK25 was found to be the most potent owing to its maximum zinc solubilization (ZnO) ability (5.0 cm). For quantitative assay, atomic absorption spectroscopy (AAS) was used, where CDK25 showed markedly higher solubilization of ZnO (20.33 ppm). It was investigated that CDK25 also endowed with multiple PGP attributes viz., Phosphate solubilization, Phytase production, Indole acetic acid (IAA) and Siderophore production. Quantitative study revealed isolate CDK25 to solubilize and produce maximum quantity of phosphate (281.59 µg/ml) and IAA (13.8 µg/ml) respectively. ZSB was applied in different treatments under pot culture assay, where T3 (seeds + CDK25) showed significant impact on plant growth parameters, besides showing maximum zinc content in fruit (0.25 mg/100 g). Hence, isolate CDK25 expresses highest potential throughout the experiments; as zinc solubilizer, PGP strain, and based on 16S rRNA gene sequencing identified as Bacillus megaterium. Therefore, meticulous use of this bacterium could aid in providing adequate amount of soluble zinc along with enhanced plants growth, nutrient uptake and yield in sustainable manner.

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