Phase transitions of choline dihydrogen phosphate: A vibrational spectroscopy and periodic DFT study.

Choline dihydrogen phosphate, [Chol][H2PO4], is a proton-conducting ionic plastic crystal exhibiting a complicated sequence of phase transitions. Here, we address the argument in the literature around the thermal properties of [Chol][H2PO4] using Raman and infrared microspectroscopy. The known structure of the low-temperature crystal, which contains the anti-conformer of [Chol]+ and hydrogen-bonded dimers of anions, was used to do periodic density functional theory calculations of the vibrational frequencies. Raman spectra indicate that the solid-solid transition at 20 °C is linked to a conformational change to the gauche [Chol] conformer with a concurrent local rearrangement of the anions. The distinct bands of lattice modes in the low-frequency range of the Raman spectra vanish at the 20 °C transition. Given the ease with which metastable crystals can be produced, Raman mappings demonstrate that a sample of [Chol][H2PO4] at ambient temperature can contain a combination of anti- and gauche conformers. Heating to 120 °C causes continuous changes in the local environment of anions rather than melting as suggested by a recent calorimetric investigation of [Chol][H2PO4]. The monotonic change in vibrational spectra is consistent with earlier observations of a very small entropy of fusion and no abrupt jump in the temperature dependence of ionic conductivity along the phase transitions of [Chol][H2PO4].

Tissue-resident glial cells associate with tumoral vasculature and promote cancer progression.

Cancer cells are embedded within the tissue and interact dynamically with its components during cancer progression. Understanding the contribution of cellular components within the tumor microenvironment is crucial for the success of therapeutic applications. Here, we reveal the presence of perivascular GFAP+/Plp1+ cells within the tumor microenvironment. Using in vivo inducible Cre/loxP mediated systems, we demonstrated that these cells derive from tissue-resident Schwann cells. Genetic ablation of endogenous Schwann cells slowed down tumor growth and angiogenesis. Schwann cell-specific depletion also induced a boost in the immune surveillance by increasing tumor-infiltrating anti-tumor lymphocytes, while reducing immune-suppressor cells. In humans, a retrospective in silico analysis of tumor biopsies revealed that increased expression of Schwann cell-related genes within melanoma was associated with improved survival. Collectively, our study suggests that Schwann cells regulate tumor progression, indicating that manipulation of Schwann cells may provide a valuable tool to improve cancer patients' outcomes.

X-Chromosome Association Study in Latin American Cohorts Identifies New Loci in Parkinson's Disease.

BACKGROUND: Sex differences in Parkinson's disease (PD) risk are well-known. However, the role of sex chromosomes in the development and progression of PD is still unclear. OBJECTIVE: The objective of this study was to perform the first X-chromosome-wide association study for PD risk in a Latin American cohort. METHODS: We used data from three admixed cohorts: (1) Latin American Research consortium on the Genetics of Parkinson's Disease (n = 1504) as discover cohort, and (2) Latino cohort from International Parkinson Disease Genomics Consortium (n = 155) and (3) Bambui Aging cohort (n = 1442) as replication cohorts. We also developed an X-chromosome framework specifically designed for admixed populations. RESULTS: We identified eight linkage disequilibrium regions associated with PD. We replicated one of these regions (top variant rs525496; discovery odds ratio [95% confidence interval]: 0.60 [0.478-0.77], P = 3.13 × 10-5 replication odds ratio: 0.60 [0.37-0.98], P = 0.04). rs5525496 is associated with multiple expression quantitative trait loci in brain and non-brain tissues, including RAB9B, H2BFM, TSMB15B, and GLRA4, but colocalization analysis suggests that rs5525496 may not mediate risk by expression of these genes. We also replicated a previous X-chromosome-wide association study finding (rs28602900), showing that this variant is associated with PD in non-European populations. CONCLUSIONS: Our results reinforce the importance of including X-chromosome and diverse populations in genetic studies. © 2023 The Authors. Movement Disorders published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society.

DFT and ab initio molecular dynamics simulation study of the infrared spectrum of the protic ionic liquid 2-hydroxyethylammonium formate.

Protic ionic liquids (PILs) typically show a complex band shape in their infrared (IR) spectra in the high-frequency range due to the hydrogen stretching vibrations of functional groups forming rather strong hydrogen bonds (H-bonds). In the low-frequency range, the intermolecular stretching mode of the H-bond leaves a mark in the far-IR spectrum of PILs. In this study, the IR spectrum of the PIL 2-hydroxyethylammonium formate, [HOCH2CH2NH3][HCOO], is investigated in order to identify the different modes that contribute to the high-frequency band shape, i.e. the cation ν(NH), ν(OH), and ν(CH) modes, and the anion ν(CH) mode, as well as the intermolecular mode of the strongest H-bond in the far-IR spectrum. The assignment is validated by quantum chemistry calculations of clusters at the density functional theory (DFT) level for four ionic pairs and by ab initio molecular dynamics (AIMD) simulations of ten ionic pairs. There is good agreement between the vibrational frequencies obtained from DFT and AIMD simulations for both the high- and low-frequency ranges. Based on the calculations, the strong H-bond interaction between the cation -NH3 group and [HCOO]- gives a broad band envelope associated with the ν(NH) mode in the high-frequency range of the IR spectrum on which there are narrower peaks corresponding to the ν(OH) and ν(CH) modes. In the far-IR (FIR) spectrum, the anions' rattling motion gives a broad feature with a maximum at 160 cm-1, while the H-bond's intermolecular NH⋯O stretching mode appears as a peak at 255 cm-1.

Confined ionic liquids films under shear: The importance of the chemical nature of the solid surface.

Ionic liquids have generated interest in applications as lubricants and as additives to conventional lubricants due to their unique physical properties. In these applications, the liquid thin film can be subjected simultaneously to extremely high shear and loads in addition to nanoconfinement effects. Here, we use molecular dynamics simulations with a coarse-grained model to study a nanometric film of an ionic liquid confined between two planar solid surfaces both at equilibrium and at several shear rates. The strength of the interaction between the solid surface and the ions was changed by simulating three different surfaces with enhanced interactions with different ions. The increase in the interaction with either the cation or the anion leads to the formation of a solid-like layer that moves alongside the substrates; however, this layer can exhibit different structures and stability. An increase in the interaction with the high symmetry anion produces a more regular structure that is more resistant to the effects of shear and viscous heating. Two definitions were proposed and used for the calculation of the viscosity: a local definition based on the microscopic characteristics of the liquid and an engineering definition based on the forces measured at the solid surfaces, with the former displaying a correlation with the layered structure induced by the surfaces. Because of the shear thinning behavior of the ionic liquids as well as the temperature rise brought on by viscous heating, both the engineering and the local viscosities decrease as the shear rate increases.

Screening of the Role of the Chemical Structure in the Electrochemical Stability Window of Ionic Liquids: DFT Calculations Combined with Data Mining.

Ionic liquids have attracted the attention of researchers as possible electrolytes for electrochemical energy storage devices. However, their properties, such as the electrochemical stability window (ESW), ionic conductivity, and diffusivity, are influenced both by the chemical structures of cations and anions and by their combinations. Most studies in the literature focus on the understanding of common ionic liquids, and little effort has been made to find ways to improve our atomistic understanding of those systems. The goal of this paper is to explore the structural characteristics of cations and anions that form ionic liquids that can expand the HOMO/LUMO gap, a property directly linked to the ESW of the electrolyte. For that, we design a framework for randomly generating new ions by combining their fragments. Within this framework, we generate about 104 cations and 104 anions and fully optimize their structures using density functional theory. Our calculations show that aromatic cations are less stable ionic liquids than aliphatic ones, an expected result if chemical rationale is used. More importantly, we can improve the gap by adding electron-donating and electron-withdrawing functional groups to the cations and anions, respectively. The increase can be about 2 V, depending on the case. This improvement is reflected in a wider ESW.

Role of density and electrostatic interactions in the viscosity and non-newtonian behavior of ionic liquids - a molecular dynamics study.

Strong ionic interactions, as well as the consequent correlations between cation and anion dynamics, give ionic liquids various physical features that set them apart from ordinary organic solvents. In particular, they result in larger viscosities and larger densities than mixtures of neutral compounds with similar molecular structures. However, both the direct effect of electrostatic interactions and the increase of liquid density contribute to the high viscosity and so far no experimental or computational work enabled a clear quantification of those effects. Also, the effects over the shear thinning behavior, which may have important consequences for application as lubricants, were not considered yet. Here, these questions were tackled by performing non-equilibrium molecular dynamics (NEMD) simulations changing both the strength of ionic interactions and liquid density at several shear rates using a coarse grained model. The relative dielectric constant was adjusted to reproduce viscosity data from all-atoms simulations on both zero shear and high shear conditions. Elimination of ionic interactions results in a reduction of density and zero shear viscosity and also delays the beginning of shear thinning to higher shear rates. Restoring density to the ionic liquid's value only partially reverses the alterations. Correlations of the non-newtonian behavior and changes in the intermolecular structure and contact lifetimes were also explored.

Cultural Consonance in Food Consumption and Nutrient Intake in Southern Brazil.

Culture influences food consumption and nutrient intake. In this paper we present a new approach in research, examining how knowledge and understanding of food is encoded in cultural models. The degree to which individuals match these shared models in their own consumption patterns is then measured, using the concept of cultural consonance. In research conducted in urban Brazil, the configuration of cultural models of food, and the association of cultural consonance in food with nutrient intake, are moderated by socioeconomic status. The theory and method employed here offers a new approach to the study of culture, food, and nutrient intake.

The role of neurogenesis in neurorepair after ischemic stroke.

Stroke consists of an abrupt reduction of cerebral blood flow resulting in hypoxia that triggers an excitotoxicity, oxidative stress, and neuroinflammation. After the ischemic process, neural precursor cells present in the subventricular zone of the lateral ventricle and subgranular zone of the dentate gyrus proliferate and migrate towards the lesion, contributing to the brain repair. The neurogenesis is induced by signal transduction pathways, growth factors, attractive factors for neuroblasts, transcription factors, pro and anti-inflammatory mediators and specific neurotransmissions. However, this endogenous neurogenesis occurs slowly and does not allow a complete restoration of brain function. Despite that, understanding the mechanisms of neurogenesis could improve the therapeutic strategies for brain repair. This review presents the current knowledge about brain repair process after stroke and the perspectives regarding the development of promising therapies that aim to improve neurogenesis and its potential to form new neural networks.

C(3)1-TAg in C57BL/6 J background as a model to study mammary tumor development.

Diagnosis and prognosis of breast cancer is based on disease staging identified through histopathological and molecular biology techniques. Animal models are used to gain mechanistic insights into the development of breast cancer. C(3)1-TAg is a genetically engineered mouse model that develops mammary cancer. However, carcinogenesis caused by this transgene was characterized in the Friend Virus B (FVB) background. As most genetic studies are done in mice with C57BL/6 J background, we aimed to define the histological alterations in C3(1)-TAg C57BL/6 J animals. Our results showed that C3(1)-TAg animals with C57BL/6 J background develop solid-basaloid adenoid cystic carcinomas with increased fibrosis, decreased area of adipocytes, and a high proliferative index, which are triple-negative for progesterone, estrogen, and human epidermal growth factor receptor 2 (HER2) receptors. Our results also revealed that tumor development is slower in the C57BL/6 J background when compared with the FVB strain, providing a better model to study the different stages in breast cancer progression.

Relating the structure and dynamics of ionic liquids under shear by means of reverse non-equilibrium molecular dynamics simulations.

The effect of the shear rate on the viscosity and the structure of 1-ethyl-3-methylimidazolium based ionic liquids with three different anions (tetrafluoroborate, dicyanamide, and bis(trifluoromethylsulfonyl)imide) was studied by means of reverse non-equilibrium molecular dynamics (RNEMD) simulations using a polarizable force field. The three liquids display a Newtonian plateau followed by a shear thinning regime at shear rates of the order of GHz. Even though the main features of the liquid structure remains under shear, systematic changes were noticed at the GHz rates, with coordination shells becoming more diffuse as noticed by the reduction in the difference between consecutive maxima and minima in the radial distribution function. Interestingly, these structural changes with the shear rate can be precisely fitted using the Carreau equation, which is a well-known expression for the shear rate dependence of the viscosity. The fitting parameters for different distributions can be used to explain qualitatively the shear thinning behavior of these liquids. In the GHz range, the cations and, in a minor extension, some anions, tend to assume preferentially a parallel orientation with the flux, which contributes to the shear thinning behavior and may have consequences for adhesion in applications as lubricants.

Assessing the oxygen reduction reaction by a 2-electron mechanism on ceria surfaces.

The 2-electron pathway of the oxygen reduction reaction is an unwanted process in the development of fuel cells. In contrast, it has gained the scientific community's attention due to its importance as a promising way of removing emergent pollutants and endocrine disruptors from water bodies and a more sustainable alternative for large-scale commercial hydrogen peroxide production. Cerium oxide has shown remarkable potential and selectivity experimentally for this mechanism, and its possible applications, exceeding the previous reference materials. In this work, we studied the 2-electron pathway for oxygen reduction on different ceria-cleaving directions (100), (110), (221), and (331) by first principles methods based on density functional theory. Our results show that the (100) surface is the most favorable for reduction, with the (331) crystallographic plane also showing potential for good catalytic activity. This fact could be essential for designing new nanostructures, with higher portions of those planes exposed, for higher catalytic activity.

High-resolution semi-automatic mapping based on an Unmanned Aerial Vehicle (UAV) to capture geological structures.

Due to the recent technological progress, Unmanned Aerial Vehicles (UAV), is an alternative for the high-resolution imaging of the terrestrial surface, helping map lineaments, essential structures on the stage of geological mapping. Therefore, this research aims to accomplish and to confirm the efficiency of the use of UAV high-resolution imaging for semi-automatic lineament mapping, in a shear zone in Guaçuí/ES. Orthomosaic was created from the UAV imaging, in which the LINE algorithm was used from Geomath PCI software for the semi-automatic mapping of lineaments. In addition, a manual lineament mapping was performed on the orthomosaic for comparison purposes, and a shaded relief image was made up of Azimuth 135° and Elevation 45°, from the SRTM data, followed by manual lineament mapping for a regional vision of the studied area. On the semi-automatic and manual extraction on the orthomosaic and shaded relief image, 61.30%, 61.63%, 57.38% of the lineaments, respectively, have NW-SE direction, showing a really strong correlation. Therefore, the semi-automatic mapping is extremely effective in terms of structural trends acquisition and can provide fine-scale data for the assessment of inaccessible areas.

Endoscopy for the treatment of posterior ankle impact syndrome: Learning curve.

BACKGROUND: This study aimed to demonstrate our learning curve of endoscopy for the treatment of Posterior Ankle Impact Syndrome (PAIS), assessing the operative time and evolution of the outcomes. METHODS: We conducted a retrospective review of 39 patients submitted to endoscopic treatment by a single surgeon over a period of ten years. We divided the study population into four blocks of ten consecutive patients and compared the mean operative time and outcomes between the four blocks. For the learning curve model, we performed linear regression analysis and logarithmic transformation. RESULTS: We found a decrease in the surgery duration over time (P = .0273). All patients had an improvement in the AOFAS Scale (P < .0001), regardless of the group (P = .07). The learning rate was estimated at 83%, indicating a 17% reduction of the operative time as the cumulative cases doubled. CONCLUSIONS: This study showed a decrease in the operative time of the posterior ankle endoscopy over the years, with an estimated learning rate of 83%. The outcomes and incidence of complications showed no relationship with operative time and the number of cases operated. LEVEL OF EVIDENCE: Level IV, case series.

Numerical Resolving of Net Faradaic Current in Fast-Scan Cyclic Voltammetry Considering Induced Charging Currents.

In this paper, we study theoretically and experimentally the effect of induced charging currents on the fast-scan cyclic voltammetry. As explained in this paper, the phenomenon originates from the coupling between faradaic and capacitive currents in the presence of uncompensated resistance. Due to the existence of induced charging currents, the capacitive contribution to the total current is different from the capacitive current measured in the absence of electroactive species. In this paper, we show that this effect is particularly important when the ratio of the capacitive current and the total current is close to unity, even for a relatively low cell time constant. Consequently, the conventional background subtraction method may be inaccurate in these situations. In this work, we develop a method that separates the faradaic and capacitive currents, combining simulation and experimental data. The method is applicable even in the presence of potential-dependent capacitance. The theoretical results are compared with some previously reported results and with experiments carried out on the potassium ferrocyanide/ferricyanide redox couple. Platinum disk electrodes of different diameters and NaClO4 support electrolyte of different concentrations were used to obtain different cell time constants. The proposed method allowed us to separate the real capacitive current even in the situations where the conventional background subtraction used in many published papers is clearly inappropriate.

An inelastic neutron scattering, Raman, far-infrared, and molecular dynamics study of the intermolecular dynamics of two ionic liquids.

The intermolecular dynamics in the THz frequency range of the ionic liquids n-butyl-trimethylammonium bis(trifluoromethanesulfonyl)imide, [N1114][NTf2], and methyl-tributylammonium bis(trifluoromethanesulfonyl)imide, [N1444][NTf2], were investigated by a combined usage of inelastic neutron scattering (INS), Raman, and far-infrared (FIR) spectroscopies and the power spectrum calculated by molecular dynamics (MD) simulations. The collective dynamics of the simulated systems is also discussed by the calculation of time correlation functions of charge and mass currents that are projected onto acoustic- and optic-like motions. The INS and Raman measurements have been performed as a function of temperature in the glassy, crystalline, and liquid phases. The excess in the vibrational density of states over the expectation of the Debye theory, the so-called boson peak, is found in the INS and Raman spectra as a peak at ∼2 meV (∼16 cm-1) and also in the direct measurement of heat capacity at very low temperatures (4-20 K). This low-frequency vibration is incorporated into the curve fits of Raman, FIR, and MD data at room temperature. Fits of spectra from these different sources in the range below 100 cm-1 are consistently achieved with three components at ca. 25, 50, and 80 cm-1, but with distinct relative intensities among the different techniques. It is proposed as the collective nature of the lowest-frequency component and the anion-cation intermolecular vibration nature of the highest-frequency component. The MD results indicate that there is no clear distinction between acoustic and optic vibrations in the spectral range investigated in this work for the ionic liquids [N1114][NTf2] and [N1444][NTf2]. The analysis carried out here agrees in part, but not entirely, with other propositions in the literature, mainly from optical Kerr effect (OKE) and FIR spectroscopies, concerning the intermolecular dynamics of ionic liquids.

Effect of alkyl-group flexibility on the melting point of imidazolium-based ionic liquids.

The low melting point of room temperature ionic liquids is usually explained in terms of the presence of bulky, low-symmetry, and flexible ions, with the first two factors related to the lattice energy while an entropic effect is attributed to the latter. By means of molecular dynamics simulations, the melting points of 1-ethyl-3-methyl-imidazolium hexafluorophosphate and 1-decyl-3-methyl-imidazolium hexafluorophosphate were determined, and the effect of the molecular flexibility over the melting point was explicitly computed by restraining the rotation of dihedral angles in both the solid and the liquid phases. The rotational flexibility over the bond between the ring and the alkyl chain affects the relative ordering of the anions around the cations and results in substantial effects over both the enthalpy and the entropy of melting. For the other dihedral angles of the alkyl group, the contributions are predominantly entropic and an alternating behavior was found. The flexibility of some dihedral angles has negligible effects on the melting point, while others can lead to differences in the melting point as large as 20 K. This alternating behavior is rationalized by the different probabilities of conformation defects in the crystal.

Ion pair free energy surface as a probe of ionic liquid structure.

Numerous combinations of cations and anions are possible for the production of ionic liquids with fine-tuned properties once the correlation with the molecular structure is known. In this sense, computer simulations are useful tools to explain and even predict the properties of ionic liquids. However, quantum mechanical methods are usually restricted to either small clusters or short time scales so that parameterized force fields are required to study the bulk liquids. In this work, a method is proposed to enable a comparison between the quantum mechanical system and both polarizable and nonpolarizable force fields by means of the calculation of free energy surfaces for the translational motion of the anion around the cation in gas phase. This method was tested for imidazolium-based cations with 3 different anions, [BF4]-, [N(CN)2]-, and [NTf2]-. Better agreement was found with the density functional theory calculations when polarizability is introduced in the force field. In addition, the ion pair free energy surfaces reproduced the main structural patterns observed in the first coordination shell in molecular dynamics simulations of the bulk liquid, proving to be useful probes for the liquid phase structure that can be computed with higher level methods and the comparison with forcefields can indicate further improvements in their parameterization.

Comparison of the Results of Primary Versus Repeat Hamstring Surgical Lengthening in Cerebral Palsy.

BACKGROUND: Hamstring surgical lengthening (HSL) has been frequently performed for the correction of knee flexion deformity in cerebral palsy (CP), although recurrence is described in long-term follow-up. Repeat hamstring surgical lengthening (RHSL) can be an option for recurrent knee flexion deformity; however, the results of this approach are still controversial. The purpose of this study was to compare the results of primary HSL and RHSL in CP. METHODS: Patients with spastic diplegic CP, Gross Motor Function Classification System levels I to III, underwent bilateral medial HSL with complete documentation in the gait laboratory before and after the intervention, were included in the study. A total of 229 subjects met the inclusion criteria and were divided into 2 groups: group A was formed by those who received medial HSL for the first time (185 patients), and group B was composed of individuals who underwent RHSL (44 patients). Clinical and kinematic parameters were evaluated before and after the intervention, and the results compared. RESULTS: The groups were matched with regard to sex distribution, Gross Motor Function Classification System levels, and follow-up time (>2 y). Popliteal angle was reduced in groups A (60.3 to 51.4 degrees, P<0.001) and B (56.1 to 51.5 degrees, P=0.001) after the intervention. Knee flexion at initial contact was reduced from 40.8 to 28.9 degrees in group A (P<0.001) and from 40.4 to 35.1 degrees in group B (P=0.001). Reduction of minimum knee flexion in the stance phase (24.9 to 17.5 degrees, P<0.001) and improvement of the Gait Deviation Index (52.9 to 60.2, P<0.001) occurred only in group A. Anterior pelvic tilt (APT) increased in groups A (from 17 to 19.5 degrees, P<0.001) and B (from 14.9 to 19.4 degrees, P<0.001) after treatment. Finally, in the comparison between groups, the reduction of knee flexion at initial contact was more significant in group A (P<0.001), whereas the increase of APT was higher in group B. CONCLUSIONS: In the present study, the improvement of knee extension during the stance phase was observed only after the primary medial HSL. Moreover, the increase of APT was more significant when RHSL was performed. LEVEL OF EVIDENCE: Level III.

The Association Between Rearfoot Motion While Barefoot and Shod in Different Types of Running Shoes in Recreational Runners.

The rearfoot angle (RFA) is a biomechanical variable widely used to determine the rearfoot motion (RM). Shoe manufacturers began to develop running shoes with RM control that would supposedly alter foot-ground interaction mechanics and neutralize excessive pronation or supination; moreover, some studies have not shown differences in rearfoot motion in shod condition compared to barefoot. This study intended to answer three questions: Do the shoes runners wear correspond to their respective barefoot RM? Does the eversion angle change during shod running, regardless the shoes worn? Can footwear designed for a specific RM (supination, pronation, neutral) correct or neutralize the eversion angle of runners? One hundred and eleven runners (38.6 ± 9.7years; 74.9 ± 12.0kg; 1.74 ± 0.08 m), who ran an average of 32 ± 17km/week, were included in this cross-sectional study. They had their RFA measured by a motion capture system when running barefoot and wearing their habitual running shoes (shod condition). Chi-squared test was used to assess associations between barefoot and shod condition and RFA was compared between conditions using Wilcoxon tests (p = 0.05). There was no association between the type of running shoe and barefoot RM (p > 0.05). There was an association between RFA when barefoot and when shod (p < 0.05). Among all participants classified as neutral, 61% continued to exhibit a normal/neutral RFA when wearing their habitual shoes. Among the overpronators, 100% showed a change in the RM to either normal or supinator. Among the participants classified as supinators, 62% exhibited normal pronation when shod even without using the appropriate footwear, claimed by the manufacturer. Only 44.1% of the sample chose the correct running shoe for their barefoot RM. The majority of runners did not choose their shoes designed for their natural type of RM. The rearfoot eversion angle changed an average 4 degrees when running shod and the RM barefoot altered quite a lot when using a running shoe. The running shoes did not correct the pronation detected barefoot, as claimed by the manufacturers.