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1.
J Exp Med ; 160(5): 1421-30, 1984 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-6333483

RESUMO

Extracts of 125I-labeled cloned murine cytotoxic T lymphocytes (CTL) were immunoprecipitated with alloantisera to the cloned CTL and rabbit antisera to beta-2 microglobulin. Polyacrylamide gel electrophoresis (PAGE) of the specific precipitates revealed, as expected, 125I-labeled components that corresponded to products of class I genes of the major histocompatibility complex (MHC). However, additional class I gene products of relatively low apparent molecular weight (Mr) were also observed. Similar analyses of spleen cells from a variety of MHC-congenic mouse strains suggested that the class I molecules of relatively low Mr are encoded in the Qa-2 region of the MHC, and this was confirmed by immunoprecipitation with a monoclonal antibody to Qa-2. Surprisingly, however, the cell surface Qa-2 molecules of different CTL clones differed in Mr, in isoelectric focusing (IEF) pattern, and in the number of distinguishable molecules expressed per clone: some clones seemed to express only a single Qa-2-encoded molecule while others expressed two distinct ones. Treatment of the immunoprecipitated Qa-2 with endoglycosidase F (Endo F) resulted in a decrease in Mr of approximately 5,000-6,000, corresponding to the expected loss of N-linked oligosaccharides, but the decrease did not eliminate structural variability among the clones. Structural diversity of the Qa-2-encoded molecules expressed on CTL could arise because CTL clones differ (a) in the particular Qa-2 genes they express, (b) in the way they splice Qa-2 gene transcripts or, perhaps, (c) in Endo F-resistant oligosaccharides on their Qa-2 molecules.


Assuntos
Antígenos de Superfície/análise , Genes , Antígenos de Histocompatibilidade Classe I , Linfócitos T Citotóxicos/imunologia , Animais , Reações Antígeno-Anticorpo , Antígenos de Superfície/genética , Antígenos de Superfície/imunologia , Células Clonais/imunologia , Código Genético , Antígenos H-2/genética , Focalização Isoelétrica , Camundongos , Camundongos Endogâmicos BALB C , Camundongos Endogâmicos C3H , Camundongos Endogâmicos C57BL , Peso Molecular , Testes de Precipitina , Distribuição Tecidual
2.
J Exp Med ; 165(5): 1358-70, 1987 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-3502706

RESUMO

We screened a cDNA library prepared from a BALB.B10 CTL clone that expresses Qa-2 antigen, and isolated four clones derived from Q7b, a Qa region gene of C57BL/10. One of these Q7b cDNAs and the Q7b chromosomal gene were subcloned into expression vectors and transfected into L cells and R1.1 thymoma cells. We found that the chromosomal Q7b gene expresses Qa-2 on the surface of R1.1 cells, but not on L cells while the Q7b cDNA expresses protein on the surface of both cell types. The levels of Qa-2 expression do not correlate with the total levels of Q7b mRNA in these transfectants. Our results suggest that the tissue-specific expression of Qa-2 may be controlled, in part, by mechanisms of alternate RNA splicing. By using hybrid gene constructs, we have mapped the tissue-specific element to the 3' part of the gene, downstream of a site near the middle of exon 4. The hybrid polypeptides differ significantly in their transmembrane and cytoplasmic regions. These portions of the protein also may play a role in the tissue-specific expression of Qa-2.


Assuntos
Antígenos de Superfície/genética , Antígenos de Histocompatibilidade Classe I , Transfecção , Animais , Sequência de Bases , Mapeamento Cromossômico , Colódio , DNA/análise , DNA/genética , Eletroforese em Gel de Poliacrilamida , Éxons , Hibridização Genética , Camundongos , Camundongos Endogâmicos , Papel
3.
Science ; 233(4762): 437-43, 1986 Jul 25.
Artigo em Inglês | MEDLINE | ID: mdl-3726537

RESUMO

The H-2 histocompatibility complex of the mouse is a multigene family, some members of which are essential for the immune response to foreign antigens. The structure and organization of these genes have been established by molecular cloning, and their regulation and function is being defined by expression of the cloned genes.


Assuntos
Antígenos H-2/genética , Complexo Principal de Histocompatibilidade , Animais , Mapeamento Cromossômico , Camundongos , Camundongos Endogâmicos BALB C , Camundongos Endogâmicos C57BL , Polimorfismo Genético
4.
Mol Cell Biol ; 7(5): 1865-72, 1987 May.
Artigo em Inglês | MEDLINE | ID: mdl-2439899

RESUMO

Molecular analysis of the heterodimeric T-cell antigen receptor of insulin-specific class II-restricted T-cell hybridomas (THys) derived from C57BL/6 (B6) wild-type and B6.C-H-2bm12 (bm12) mutant mice revealed that such T cells use a diverse V gene repertoire. Analysis of three THys that use related V genes, however, showed a number of novel features. Two THys that share major histocompatibility complex restriction use V alpha genes that are 98.6% homologous. Two THys sharing the same antigen fine specificity use a particular germ line V beta D beta J beta combination. A 21-base-pair deletion in the 5' segment of the J beta gene occurs in one THy, suggesting a novel mechanism for generating diversity in T-cell antigen receptor beta genes. The first amino acid encoded by N sequences at the V-D junction is conserved in a pair of T cells which recognize identical antigenic epitopes. The implications of these findings for the structural mechanisms underlying major histocompatibility complex-restricted antigen-specific T-cell recognition are discussed.


Assuntos
Antígenos de Histocompatibilidade Classe II/imunologia , Insulina/imunologia , Receptores de Antígenos de Linfócitos T/fisiologia , Linfócitos T/imunologia , Animais , Clonagem Molecular , DNA/genética , Epitopos , Hibridomas/imunologia , Complexo Principal de Histocompatibilidade , Camundongos , Camundongos Mutantes , Fragmentos de Peptídeos/genética , Receptores de Antígenos de Linfócitos T/genética , Receptores de Antígenos de Linfócitos T alfa-beta
5.
mBio ; 8(5)2017 09 12.
Artigo em Inglês | MEDLINE | ID: mdl-28900020

RESUMO

Bacillus anthracis-a Gram-positive, spore-forming bacterium-causes anthrax, a highly lethal disease with high bacteremia titers. Such rapid growth requires ample access to nutrients, including iron. However, access to this critical metal is heavily restricted in mammals, which requires B. anthracis to employ petrobactin, an iron-scavenging small molecule known as a siderophore. Petrobactin biosynthesis is mediated by asb gene products, and import of the iron-bound (holo)-siderophore into the bacterium has been well studied. In contrast, little is known about the mechanism of petrobactin export following its production in B. anthracis cells. Using a combination of bioinformatics data, gene deletions, and laser ablation electrospray ionization mass spectrometry (LAESI-MS), we identified a resistance-nodulation-cell division (RND)-type transporter, termed ApeX, as a putative petrobactin exporter. Deletion of apeX abrogated export of intact petrobactin, which accumulated inside the cell. However, growth of ΔapeX mutants in iron-depleted medium was not affected, and virulence in mice was not attenuated. Instead, petrobactin components were determined to be exported through a different protein, which enables iron transport sufficient for growth, albeit with a slightly lower affinity for iron. This is the first report to identify a functional siderophore exporter in B. anthracis and the in vivo functionality of siderophore components. Moreover, this is the first application of LAESI-MS to sample a virulence factor/metabolite directly from bacterial culture media and cell pellets of a human pathogen.IMPORTANCEBacillus anthracis requires iron for growth and employs the siderophore petrobactin to scavenge this trace metal during infections. While we understand much about petrobactin biosynthesis and ferric petrobactin import, how apo-petrobactin (iron free) is exported remains unknown. This study used a combination of bioinformatics, genetics, and mass spectrometry to identify the petrobactin exporter. After screening 17 mutants with mutations of candidate exporter genes, we identified the apo-petrobactin exporter (termed ApeX) as a member of the resistance-nodulation-cell division (RND) family of transporters. In the absence of ApeX, petrobactin accumulates inside the cell while continuing to export petrobactin components that are capable of transporting iron. Thus, the loss of ApeX does not affect the ability of B. anthracis to cause disease in mice. This has implications for treatment strategies designed to target and control pathogenicity of B. anthracis in humans.


Assuntos
Bacillus anthracis/metabolismo , Proteínas de Bactérias/metabolismo , Benzamidas/metabolismo , Proteínas de Membrana Transportadoras/metabolismo , Animais , Bacillus anthracis/genética , Bacillus anthracis/patogenicidade , Proteínas de Bactérias/genética , Proteínas de Bactérias/isolamento & purificação , Biologia Computacional , Deleção de Genes , Ferro/metabolismo , Deficiências de Ferro , Proteínas de Membrana Transportadoras/química , Proteínas de Membrana Transportadoras/genética , Proteínas de Membrana Transportadoras/isolamento & purificação , Camundongos , Mutação , Óperon , Espectrometria de Massas por Ionização por Electrospray , Fatores de Virulência/metabolismo
6.
Cancer Res ; 61(21): 7770-6, 2001 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-11691791

RESUMO

The clinical utility of antineoplastic agents is limited by the development of drug resistance by tumors. Mitomycin C (MC) is a bacterial product that must be enzymatically reduced to exert anticancer activity. We have demonstrated that expression of the bacterial MC resistance-associated (MCRA) protein in Chinese hamster ovary (CHO) cells confers profound resistance to this antibiotic under aerobic conditions, but not under hypoxia. MCRA produces resistance to MC by redox cycling of the activated hydroquinone intermediate back to the prodrug form. A CHO cell line developed by stepwise exposure to increasing concentrations of MC likewise expressed high level resistance to MC in air, but not under hypoxia. The overexpression of DT-diaphorase and NADPH:cytochrome c (P-450) reductase, two enzymes known to activate MC, restored sensitivity to MC in both MCRA-transfected and drug-selected cell lines. The level of sensitization was proportional to the quantity of enzyme activity expressed, supporting the concept that the levels of these two activating enzymes are important for sensitivity to MC. The findings of resistance to MC in air but not under hypoxic conditions and of restoration of sensitivity to MC by increasing levels of DT-diaphorase activity, properties not adequately explained by other resistance mechanisms (i.e., decreases in MC activation, repair of DNA lesions, and/or drug efflux), support the hypothesis that a functional mammalian homologue of MCRA may be involved in producing resistance to MC.


Assuntos
Antibióticos Antineoplásicos/farmacologia , Mitomicina/farmacologia , NAD(P)H Desidrogenase (Quinona)/biossíntese , NADPH-Ferri-Hemoproteína Redutase/biossíntese , Oxirredutases , Animais , Antibióticos Antineoplásicos/farmacocinética , Proteínas de Bactérias/genética , Biotransformação , Células CHO/efeitos dos fármacos , Células CHO/enzimologia , Hipóxia Celular/fisiologia , Cricetinae , Resistencia a Medicamentos Antineoplásicos , Mitomicina/farmacocinética , NAD(P)H Desidrogenase (Quinona)/genética , NAD(P)H Desidrogenase (Quinona)/metabolismo , NADPH-Ferri-Hemoproteína Redutase/genética , NADPH-Ferri-Hemoproteína Redutase/metabolismo , Oxigênio/metabolismo , Transfecção
7.
Biochim Biophys Acta ; 1251(1): 32-42, 1995 Aug 16.
Artigo em Inglês | MEDLINE | ID: mdl-7647090

RESUMO

Acyl carrier proteins (ACPs) of the type II polyketide synthases for the aromatic antibiotics actinorhodin, granaticin, frenolicin and oxytetracycline were expressed in Escherichia coli downstream of an inducible phage T7 promoter. For the act and otc genes, several of the first eight codons were changed to synonymous codons used in highly expressed E. coli genes. Correlated with these changes, the amounts of the act and otc ACPs purified from the recombinant E. coli cultures were an order of magnitude greater than for the gra and fren ACPs expressed from the unmodified genes. Electrospray mass spectrometry (ESMS) of the purified proteins confirmed their calculated M(r) based on the DNA sequences while also revealing that, in the act and gra ACP samples, some 2% and 30% of the holo-form of the protein was present (i.e., carrying the 4'-phosphopantetheine prosthetic group), with the remainder (and 100% of the otc and fren samples) being in the apo-form. Increasing incubation time post heat induction led to an increase in act holo-ACP. The recombinant act and gra ACPs could function in vitro as substrates for an S. coelicolor malonyl CoA:ACP acyl transferase, as measured by the coupling of a labelled malonyl unit to the ACP; their quantitative abilities to do so correlated with the proportions of deduced holo form in the two samples.


Assuntos
Proteína de Transporte de Acila/genética , Complexos Multienzimáticos/metabolismo , Streptomyces/genética , Proteína de Transporte de Acila/isolamento & purificação , Proteína de Transporte de Acila/metabolismo , Cromatografia Líquida de Alta Pressão , Clonagem Molecular , Escherichia coli/metabolismo , Expressão Gênica , Espectrometria de Massas , Streptomyces/metabolismo
8.
Chem Biol ; 6(4): 251-63, 1999 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-10099135

RESUMO

BACKGROUND: The mitomycins are natural products that contain a variety of functional groups, including aminobenzoquinone- and aziridine-ring systems. Mitomycin C (MC) was the first recognized bioreductive alkylating agent, and has been widely used clinically for antitumor therapy. Precursor-feeding studies showed that MC is derived from 3-amino-5-hydroxybenzoic acid (AHBA), D-glucosamine, L-methionine and carbamoyl phosphate. A genetically linked AHBA biosynthetic gene and MC resistance genes were identified previously in the MC producer Streptomyces lavendulae NRRL 2564. We set out to identify other genes involved in MC biosynthesis. RESULTS: A cluster of 47 genes spanning 55 kilobases of S. lavendulae DNA governs MC biosynthesis. Fourteen of 22 disruption mutants did not express or overexpressed MC. Seven gene products probably assemble the AHBA intermediate through a variant of the shikimate pathway. The gene encoding the first presumed enzyme in AHBA biosynthesis is not, however, linked within the MC cluster. Candidate genes for mitosane nucleus formation and functionalization were identified. A putative MC translocase was identified that comprises a novel drug-binding and export system, which confers cellular self-protection on S. lavendulae. Two regulatory genes were also identified. CONCLUSIONS: The overall architecture of the MC biosynthetic gene cluster in S. lavendulae has been determined. Targeted manipulation of a putative MC pathway regulator led to a substantial increase in drug production. The cloned genes should help elucidate the molecular basis for creation of the mitosane ring system, as well efforts to engineer the biosynthesis of novel natural products.


Assuntos
Antibióticos Antineoplásicos/biossíntese , Proteínas Fúngicas/genética , Regulação Fúngica da Expressão Gênica , Mitomicina/biossíntese , Família Multigênica/genética , Streptomyces/genética , Sequência de Aminoácidos , Aminobenzoatos/metabolismo , Resistência Microbiana a Medicamentos/genética , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/fisiologia , Hidroxibenzoatos , Dados de Sequência Molecular , Família Multigênica/fisiologia , Homologia de Sequência de Aminoácidos , Streptomyces/metabolismo
9.
Chem Biol ; 7(12): 907-18, 2000 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11137814

RESUMO

BACKGROUND: Modular polyketide synthases (PKSs) produce a wide range of medically significant compounds. In the case of the pikromycin PKS of Streptomyces venezuelae, four separate polypeptides (PikAI-PikAIV), comprising a total of one loading domain and six extension modules, generate the 14-membered ring macrolactone narbonolide. The polypeptide PikAIV contains a thioesterase (TE) domain and is responsible for catalyzing both the last elongation step with methylmalonyl CoA, and subsequent release of the final polyketide chain elongation intermediate from the PKS. Under certain growth conditions this polypeptide is synthesized from an alternative translational start site, giving rise to an N-terminal truncated form of PikAIV, containing only half of the ketosynthase (KS(6)) domain. The truncated form of PikAIV is unable to catalyze the final elongation step, but is able to cleave a polyketide chain from the preceding module on PikAIII (ACP(5)), giving rise to the 12-membered ring product 10-deoxymethynolide. RESULTS: S. venezuelae mutants expressing hybrid PikAIV polypeptides containing acyl carrier protein (ACP) and malonyl CoA specific acyltransferase (AT) domains from the rapamycin PKS were unable to catalyze production of 12- or 14-membered ring macrolactone products. Plasmid-based expression of a hybrid PikAIV containing the native KS(6) and TE domains, however, restored production of both narbonolide and 10-deoxymethynolide in the S. venezuelae AX912 mutant that generates a TE-deleted form of PikAIV. Use of alternative KS domains or deletion of the KS(6) domain within the hybrid PikAIV resulted in loss of both products. Plasmid-based expression of a TE domain of PikAIV as a separate polypeptide in the AX912 mutant resulted in greater than 50% restoration of 10-deoxymethynolide, but not in mutants expressing a hybrid PikAIV bearing an unnatural AT domain. Mutants expressing hybrid PikAIV polypeptides containing the natural AT(6) domains and different ACP domains efficiently produced polyketide products, but with a significantly higher 10-deoxymethynolide/narbonolide ratio than observed with native PikAIV. CONCLUSIONS: Dimerization of KS(6) modules allows in vivo formation of a PKS heterodimer using PikAIV polypeptides containing different AT and ACP domains. In such heterodimers, the TE domain and the AT(6) domain responsible for formation of the narbonolide product are located on different polypeptide chains. The AT(6) domain of PikAIV plays an important role in facilitating TE-catalyzed chain termination (10-deoxymethynolide formation) at the proceeding module in PikAIII. The pikromycin PKS can tolerate the presence of multiple forms (active and inactive) of PikAIV, and decreased efficiency of elongation by PikAIV can result in increased levels of 10-deoxymethynolide. These results provide new insight into functional molecular interactions and interdomain recognition in modular PKSs.


Assuntos
Macrolídeos , Complexos Multienzimáticos/química , Complexos Multienzimáticos/metabolismo , Streptomyces/enzimologia , Antibacterianos/biossíntese , Antibacterianos/química , Dimerização , Lactonas/metabolismo , Estrutura Molecular , Complexos Multienzimáticos/genética , Mutação , Estrutura Terciária de Proteína , Subunidades Proteicas , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/metabolismo , Streptomyces/genética , Streptomyces/metabolismo , Especificidade por Substrato
10.
Chem Biol ; 5(11): 661-7, 1998 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-9831532

RESUMO

BACKGROUND: . Streptomyces venezuelae produces two groups of antibiotics that include the 12-membered ring macrolides methymycin and neomethymycin, and the 14-membered ring macrolide pikromycin. Methymycin and pikromycin are derived from the corresponding precursors, YC-17 and narbomycin, respectively, by hydroxylation of the tertiary carbon position (C-10 in YC-17 or C-12 in narbomycin) on the macrolactone ring. In contrast, neomethymycin is derived from YC-17 by hydroxylation of the secondary carbon (C-12) of the propionyl starter unit sidechain. RESULTS: . Using a genetic and biochemical approach we have characterized a single P450 hydroxylase (PikC) in the methymycin/pikromycin biosynthetic gene cluster (pik) from S. venezuelae. Inactivation of pikC abolished production of all hydroxylated macrolides, with corresponding accumulation of YC-17 and narbomycin in the culture medium. The enzyme was produced efficiently and purified as a His-tagged protein from recombinant Escherichia coli cells. Purified PikC effectively converts YC-17 into methymycin and neomethymycin and narbomycin into pikromycin in vitro. CONCLUSIONS: . These results demonstrate that PikC is responsible for the conversion of YC-17 to methymycin and neomethymycin, and narbomycin to pikromycin in S. venezuelae. This substrate flexibility is unique and represents the first example of a P450 hydroxylase that can accept 12- and 14-membered ring macrolides as substrates, as well as functionalize at two positions on the macrolactone system. The broad substrate specificity of PikC provides a potentially valuable entry into the construction of novel macrolide- and ketolide-based antibiotics.


Assuntos
Antibacterianos/biossíntese , Sistema Enzimático do Citocromo P-450/biossíntese , Sistema Enzimático do Citocromo P-450/genética , Genes Bacterianos/genética , Macrolídeos/metabolismo , Streptomyces/enzimologia , Streptomyces/genética , Sequência de Aminoácidos , Sequência de Bases , Meios de Cultura , Cinética , Dados de Sequência Molecular , Plasmídeos/genética
11.
Gene ; 245(1): 203-11, 2000 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-10713461

RESUMO

The methymycin and pikromycin series of antibiotics are structurally related macrolides produced by several Streptomyces species, including Streptomyces venezuelae ATCC 15439, which produces both 12-membered ring macrolides methymycin, neomethymycin, and 14-membered ring macrolides pikromycin and narbomycin. Cloning and sequencing of the biosynthetic gene clusters for these macrolides from three selected Streptomyces strains revealed a common genetic architecture of their polyketide synthases (PKSs). Unlike PKS clusters of other 14-membered ring macrolides such as erythromycin and oleandomycin, each of the pikromycin series producers harbors a six module PKS cluster, in which modules 5 and 6 are encoded on two separate proteins instead of one bimodular protein, as well as a thioesterase II gene immediately downstream of the main PKS gene. The results shed new light on the evolution of modular PKSs and provide further evidence on the regulation of methymycin and pikromycin production in S. venezuelae ATCC 15439.


Assuntos
Antibacterianos/biossíntese , Genes Bacterianos/genética , Macrolídeos , Complexos Multienzimáticos/genética , Sequência de Aminoácidos , Sequência de Bases , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Bacteriano/isolamento & purificação , Ácido Graxo Sintases/genética , Dados de Sequência Molecular , Complexos Multienzimáticos/metabolismo , Família Multigênica/genética , Alinhamento de Sequência , Análise de Sequência de DNA , Homologia de Sequência do Ácido Nucleico , Streptomyces/enzimologia , Streptomyces/genética , Streptomyces/metabolismo , Tioléster Hidrolases/genética
12.
Gene ; 142(1): 31-9, 1994 May 03.
Artigo em Inglês | MEDLINE | ID: mdl-8181754

RESUMO

A 10.2-kb fragment of DNA from Streptomyces roseofulvus, which contains polyketide synthase (PKS)-encoding genes (fren) presumed to determine production of the antibiotics frenolicin and the nanaomycins, was cloned. A 5530-bp continuous segment of this DNA was sequenced. Analysis of the sequence revealed five complete open reading frames (ORFs) transcribed in one direction (ORFs 1, 2, 3, 5, 4) and one (ORFX), located between ORF3 and ORF5, transcribed in the opposite direction. The deduced amino-acid sequences of ORFs 1, 2, 3, 4 and 5 closely resemble the sequences of known components of the type-II PKS from other Streptomyces species: putative heterodimeric (ORF1 + 2) ketosynthase, acyl carrier protein, cyclase and ketoreductase, respectively. A resemblance between the N-terminal and C-terminal halves of the ORF4 product--also discovered in the corresponding genes from other isochromanequinone antibiotic producers--suggests a possible origin of the cyclase-encoding gene by duplication. ORFX appears to represent a novel class of genes of unknown function present not only in the fren cluster, but also in other clusters of aromatic antibiotic biosynthetic genes in Streptomyces species. The fren-ORF1-5 genes, encoding a PKS that constructs a nascent polyketide of either 16 or 18 carbons, compared with fixed lengths of 16 and 20 for other available examples, are proving to be valuable for understanding the mechanisms controlling polyketide chain length and patterns of reduction and cyclisation.


Assuntos
Antibacterianos/biossíntese , Proteínas de Bactérias , Família Multigênica , Streptomyces/genética , Aciltransferases/genética , Oxirredutases do Álcool/genética , Sequência de Aminoácidos , Sequência de Bases , Clonagem Molecular , DNA Bacteriano/isolamento & purificação , Genes Bacterianos , Dados de Sequência Molecular , Naftoquinonas , Fases de Leitura Aberta , Policetídeo Sintases , Mapeamento por Restrição
13.
Gene ; 175(1-2): 261-7, 1996 Oct 10.
Artigo em Inglês | MEDLINE | ID: mdl-8917108

RESUMO

The mcr locus from Streptomyces lavendulae confers high level resistance (> 100 micrograms/ml) to mitomycin C (MC) and related mitomycins when cloned into Streptomyces lividans. Production of the mcrA gene product (MCRA) was shown to be MC-inducible by identification of MCRA (M(r) of 54 kDa) using Western blot analysis and enzyme linked immunosorbent assay (ELISA). The magnitude of MCRA production was dependent on MC concentration, with primary induction starting at 0.1 microgram/ml and maximum induction at 10 micrograms/ml of the drug. Different levels of MCRA production were observed when other mitomycin metabolites were used as inducers, and the level of induction related directly to aziridine ring substitution on the individual molecules. Moreover, inducible synthesis of the mcr A gene product was unique to this structural class since production of MCRA did not occur as a general response to DNA damaging agents. The time profile of intracellular MCRA synthesis correlated with MC production in S. lavendulae, suggesting coordinated regulation of MC resistance and biosynthetic genes.


Assuntos
Antibióticos Antineoplásicos/farmacologia , Proteínas de Bactérias/biossíntese , Mitomicina/farmacologia , Oxirredutases , Streptomyces/metabolismo , Dano ao DNA , DNA Fúngico/efeitos dos fármacos , Resistência a Medicamentos/genética , Mitomicinas , Streptomyces/genética
14.
Gene ; 263(1-2): 255-64, 2001 Jan 24.
Artigo em Inglês | MEDLINE | ID: mdl-11223265

RESUMO

In Streptomyces venezuelae, four polyketide synthase (PKS) polypeptides encoded by pikAI-pikAIV are used to generate 10 and 12-membered macrocyclic structures, narbonolide and 10-deoxymethynolide. Sequence analysis suggests these genes are translationally coupled with downstream genes, pikAV (encoding a type II thioesterase), desVIII-desVI (encoding enzymes responsible for production of the final glycosylated products pikromycin, narbomycin, methymycin and neomethymycin) and desR (a resistance gene). Type II thioesterases have been suggested to have an editing function in polyketide biosynthesis and deletion of the corresponding genes often leads to decreased levels of polyketide production. Surprisingly an in-frame deletion of 687 bp of the 843 bp pikAV ORF led to a strain SC1022 that produced normal yields of polyketide products, but only in the aglycone form. Plasmid-based expression of the desVIII-VI and desR in the SC1022 strain completely restored production of glycosylated products, despite the absence of a functional pikAV gene product. Under these conditions the PikAV TEII therefore does not play an important role in polyketide biosynthesis, and its function remains an enigma. These observations also demonstrate that the region of pikAV DNA deleted in strain SC1022 contains a transcription unit essential for expression of the des genes. A sequence alignment of PikAV with members of the highly conserved type II thioesterases revealed a short divergent region at the carboxy terminus, suggesting a region of pikAV that might contain such a transcription unit. DNA containing this region of pikAV was shown to be able to increase plasmid-based expression of both crotonyl CoA reductase gene (ccr) and the erythromycin resistance gene (ermE) in S. venezuelae.


Assuntos
Ácido Graxo Sintases/genética , Streptomyces/genética , Tioléster Hidrolases/genética , Acil-CoA Desidrogenases , Sequência de Aminoácidos , Antibacterianos/metabolismo , Proteínas de Bactérias/genética , Cosmídeos/genética , DNA Recombinante , Ácido Graxo Sintases/metabolismo , Regulação Bacteriana da Expressão Gênica , Regulação Enzimológica da Expressão Gênica , Teste de Complementação Genética , Glicosilação , Lactonas/química , Lactonas/metabolismo , Macrolídeos/metabolismo , Dados de Sequência Molecular , Mutação , Óperon , Oxirredutases/genética , Oxirredutases/metabolismo , Deleção de Sequência , Homologia de Sequência de Aminoácidos , Streptomyces/enzimologia , Streptomyces/metabolismo , Tioléster Hidrolases/metabolismo , Fatores de Tempo , Transcrição Gênica
15.
Gene ; 141(1): 141-2, 1994 Apr 08.
Artigo em Inglês | MEDLINE | ID: mdl-8163168

RESUMO

The complete nucleotide sequences of the Streptomyces rimosus oxytetracycline (oxyTc) polyketide synthase (PKS)-encoding genes (otcY) has been determined, revealing three open reading frames. The deduced amino-acid sequences correspond to the presumed heterodimeric beta-ketoacyl synthase and acyl carrier protein found in other type-II (multicomponent) PKS systems that specify construction of acetate-derived polyketide antibiotics.


Assuntos
Genes Bacterianos/genética , Complexos Multienzimáticos/genética , Oxitetraciclina/biossíntese , Streptomyces/enzimologia , Sequência de Aminoácidos , Dados de Sequência Molecular , Complexos Multienzimáticos/química , Mapeamento por Restrição , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Streptomyces/genética
16.
Org Lett ; 1(1): 133-6, 1999 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-10822548

RESUMO

[formula: see text] The appended sugars in macrolide antibiotics are indispensable to the biological activities of these important drugs. In an effort to generate a set of novel macrolide derivatives, we have created a new analogue of methymycin and neomethymycin, antibiotics produced by Streptomyces venezuelae. This analogue 15 carrying a different sugar, D-quinovose, instead of D-desosamine, was constructed by taking advantage of targeted gene deletion combined with a specific pathway-independent C-3 reduction capability of the wild type S. venezuelae.


Assuntos
Amino Açúcares/biossíntese , Antibacterianos/biossíntese , Carboidratos/química , Macrolídeos , Streptomyces/metabolismo , Amino Açúcares/química , Antibacterianos/química , Mutação , Conformação Proteica , Streptomyces/genética
17.
Ann N Y Acad Sci ; 782: 17-24, 1996 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-8659893

RESUMO

The biosynthesis of beta-lactams is one of the most thoroughly studied antibiotic pathways. The availability of the characteristics and the time profiles of activities of enzymes involved in the biosynthesis allows one to critically evaluate the potential rate-limiting steps in its production. Our approach to understanding the control of beta-lactam biosynthesis has been pursued using a two-stage strategy: (1) to predict the rate-limiting steps using a kinetic model and (2) to relax the rate-limiting steps by engineering the biosynthetic pathway or by altering the kinetic parameters of the predicted key rate-limiting enzyme. Kinetic analysis of the pathway dynamics of cephamycin C production in Streptomyces clavuligerus was performed using data obtained from wild type. Sensitivity analysis revealed that the availability of precursor alpha-aminoadipic acid and activity of ACV synthetase were the potential rate-limiting steps. Relaxation of the precursor limitation was accomplished by integration of an additional copy of the gene encoding lysine-epsilon-aminotransferase (lat) into the chromosome. The recombinant strain showed an increased level of cephamycin C production as expected. The intracellular levels of different intermediates in the pathway in batch cultures were analyzed.


Assuntos
Cefalosporinas/biossíntese , Streptomyces/metabolismo , Sequência de Aminoácidos , Cromossomos Bacterianos , Genes Bacterianos , Engenharia Genética/métodos , Cinética , L-Lisina 6-Transaminase , Modelos Biológicos , Dados de Sequência Molecular , Mutagênese , Oligopeptídeos/metabolismo , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/metabolismo , Streptomyces/genética , Streptomyces/crescimento & desenvolvimento , Tiorredoxina Dissulfeto Redutase/metabolismo , Tiorredoxinas/metabolismo , Transaminases/biossíntese , Transaminases/genética , Transaminases/metabolismo
18.
Biotechnol Prog ; 17(6): 1000-7, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11735432

RESUMO

Linkage between structural and regulatory genes implies that a direct correlation should exist between the spatio-temporal distribution of their expression. Green fluorescent protein (GFP) and cyan fluorescent protein (CFP) were used as reporters to analyze simultaneously expression of lysine-epsilon-aminotransferase (LAT) and its corresponding genetic regulator, CcaR. The isogenic strain containing lat::gfp and ccaR::cfp in the chromosome produced cephamycin C at levels similar to wild type Streptomyces clavuligerus. Confocal laser scanning microscopy revealed that expression of both LAT and CcaR in liquid culture was temporally dynamic and spatially heterogeneous in S. clavuligerus mycelia. During the early culture stage only a part of the mycelia began to express LAT and CcaR at low levels. As the culture aged, expression levels and the population of mycelia expressing LAT and CcaR increased and were followed late in the growth cycle by a reduction of the mycelia population expressing LAT and CcaR. The approach provides a precise simultaneous temporal-spatial expression profile and corroborates the regulatory linkage between ccaR and lat in S. clavuligerus.


Assuntos
Cefamicinas/biossíntese , Regulação Bacteriana da Expressão Gênica/genética , Streptomyces/genética , Streptomyces/metabolismo , Western Blotting , Cromossomos Bacterianos/genética , Meios de Cultura , Perfilação da Expressão Gênica , Genes Bacterianos/genética , Processamento de Imagem Assistida por Computador , Cinética , Microscopia Confocal , Mutação/genética , Plasmídeos/genética , Conformação Proteica , Transaminases/metabolismo
19.
Biotechnol Prog ; 15(6): 1020-7, 1999.
Artigo em Inglês | MEDLINE | ID: mdl-10585184

RESUMO

The biosynthesis of secondary metabolites is closely linked to primary metabolism via the supply of precursors, cofactors, and cellular energy. The availability of these precursors and cofactors can potentially be rate-limiting for secondary metabolism. A combined experimental and kinetic modeling approach was used to examine the regulation of flux in the cephamycin biosynthetic pathway in Streptomyces clavuligerus. The kinetic parameters of lysine 6-aminotransferase (LAT), the first enzyme leading to cephamycin biosynthesis and one which was previously identified as being a rate-limiting enzyme, were characterized. LAT converts lysine to alpha-aminoadipic acid using alpha-ketoglutarate as a cosubstrate. The K(m) values for lysine and alpha-ketoglutarate were substantially higher than those for their intracellular concentrations, suggesting that lysine and alpha-ketoglutarate may play a key role in regulating the flux of cephamycin biosynthesis. The important role of this precursor/cosubstrate was supported by simulated results using a kinetic model. When the intracellular concentrations and high K(m) values were taken into account, the predicted intermediate concentration was similar to the experimental measurements. The results demonstrate the controlling roles that precursors and cofactors may play in the biosynthesis of secondary metabolites.


Assuntos
Cefamicinas/biossíntese , Streptomyces/metabolismo , Transaminases/metabolismo , Biotecnologia/métodos , Cinética , L-Lisina 6-Transaminase
20.
Comp Biochem Physiol B Biochem Mol Biol ; 119(4): 677-90, 1998 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-9787760

RESUMO

The amino acid sequences of the amidinotransferases and the nucleotide sequences of their genes or cDNA from four Streptomyces species (seven genes) and from the kidneys of rat, pig, human and human pancreas were compared. The overall amino acid and nucleotide sequences of the prokaryotes and eukaryotes were very similar and further, three regions were identified that were highly identical. Evidence is presented that there is virtually zero chance that the overall and high identity regions of the amino acid sequence similarities and the overall nucleotide sequence similarities between Streptomyces and mammals represent random match. Both rat and lamprey amidinotransferases were able to use inosamine phosphate, the amidine group acceptor of Streptomyces. We have concluded that the structure and function of the amidinotransferases and their genes has been highly conserved through evolution from prokaryotes to eukaryotes. The evolution has occurred with: (1) a high degree of retention of nucleotide and amino acid sequences; (2) a high degree of retention of the primitive Streptomyces guanine + cytosine (G + C) third codon position composition in certain high identity regions of the eukaryote cDNA; (3) a decrease in the specificities for the amidine group acceptors; and (4) most of the mutations silent in the regions suggested to code for active sites in the enzymes.


Assuntos
Amidinotransferases/química , Células Eucarióticas/enzimologia , Células Procarióticas/enzimologia , Amidinotransferases/genética , Sequência de Aminoácidos , Animais , Pareamento de Bases , Sequência de Bases , Sequência Conservada/genética , Bases de Dados Factuais , Evolução Molecular , Rim/enzimologia , Mamíferos/metabolismo , Dados de Sequência Molecular , Pâncreas/enzimologia , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Homologia de Sequência do Ácido Nucleico , Streptomyces/enzimologia , Especificidade por Substrato
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